RH142576 Marker Search Result - Rat Genome Database

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Marker: RH142576

Symbol: RH142576
Previously known as: AI535172; 
RGD ID: 5053313
Expected Size: 157 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2561,309,566 - 61,309,723 (+)MAPPERmRatBN7.2
Rnor_6.0562,643,358 - 62,643,514NCBIRnor6.0
Rnor_5.0567,163,824 - 67,163,980UniSTSRnor5.0
RGSC_v3.4563,633,924 - 63,634,080UniSTSRGSC3.4
Celera559,866,322 - 59,866,478UniSTS
RH 3.4 Map5372.6UniSTS
Cytogenetic Map5q22UniSTS
Is Marker For: Genes:   Anks6  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer GTGGTCTGGCAAGCAAAAAT
Reverse Primer ACCTTGTCCCAGCTCACACT
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
3334Anks6ankyrin repeat and sterile alpha motif domain containing 656130918361350596Rat
RefSeq Transcripts NM_001015028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AY661303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC091436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 40 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1578776Stresp18Stress response QTL 182.9thymus mass (VT:0004954)thymus wet weight (CMO:0000855)52795544072955440Rat
1298067Scl15Serum cholesterol level QTL 154.80.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53321566578215665Rat
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)54786906290099692Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)51887394774251464Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
61386Bp49Blood pressure QTL 4916.6cerebrum integrity trait (VT:0010549)brain infarction volume (CMO:0001013)56029343498603051Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
1598807Glom12Glomerulus QTL 122.7kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)53321566578215665Rat

1 to 10 of 40 rows


Database
Acc Id
Source(s)
NCBI Gene 362515 UniSTS