Slc4a3 (solute carrier family 4 member 3)

Gene: Slc4a3 (solute carrier family 4 member 3) Rattus norvegicus

Analyze

Symbol:

Slc4a3

Name:

solute carrier family 4 member 3

RGD ID:

3712

Description:

Enables chloride:bicarbonate antiporter activity and enzyme binding activity. Predicted to be involved in several processes, including bicarbonate transport; regulation of cardiac muscle cell action potential; and regulation of pH. Predicted to act upstream of or within cardiac conduction. Located in plasma membrane. Orthologous to human SLC4A3 (solute carrier family 4 member 3); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

AE 3; Ae3; Aep3; anion exchange protein 3; anion exchanger 3; B3RP-3; band 3-related protein 3; neuronal band 3-like protein; solute carrier family 4 (anion exchanger), member 3; Solute carrier family 4 member 3 anion exchange protein 3; solute carrier family 4, member 3; Solute carrier family 4, member 3, anion exchange protein 3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC4A3 (solute carrier family 4 member 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Slc4a3 (solute carrier family 4 (anion exchanger), member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slc4a3 (solute carrier family 4 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLC4A3 (solute carrier family 4 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLC4A3 (solute carrier family 4 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slc4a3 (solute carrier family 4 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLC4A3 (solute carrier family 4 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLC4A3 (solute carrier family 4 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slc4a3 (solute carrier family 4 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	SFXN4 (sideroflexin 4)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	SLC4A3 (solute carrier family 4 member 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc4a3 (solute carrier family 4 (anion exchanger), member 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc4a3 (solute carrier family 4 member 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	BOR1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG8177	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	abts-4	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	slc4a3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	84,484,749 - 84,497,746 (+)	NCBI		GRCr8
mRatBN7.2	9	77,036,243 - 77,053,940 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	77,037,016 - 77,049,105 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	85,481,242 - 85,493,343 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	90,610,117 - 90,622,218 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	88,996,301 - 89,008,402 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	82,742,207 - 82,755,119 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	82,741,920 - 82,755,153 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	82,512,289 - 82,524,380 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	74,823,769 - 74,835,860 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	74,983,838 - 74,995,930 (+)	NCBI
Celera	9	74,606,698 - 74,618,789 (+)	NCBI		Celera
Cytogenetic Map	9	q33	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

heart disease (ISO)

Neurodevelopmental Disorders (ISO)

polydactyly (ISO)

retinal degeneration (ISO)

Short QT Syndrome 7 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

acetamide (EXP)

acrylamide (ISO)

ammonium chloride (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

boric acid (ISO)

cantharidin (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

cisplatin (ISO)

clofibrate (ISO)

cobalt dichloride (EXP)

cocaine (EXP)

cyclosporin A (ISO)

decabromodiphenyl ether (EXP)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (ISO)

folic acid (ISO)

furan (EXP)

gentamycin (EXP)

methamphetamine (ISO)

niclosamide (ISO)

paracetamol (ISO)

phenylephrine (EXP)

phenytoin (EXP)

resveratrol (ISO)

sulforaphane (ISO)

tetrachloroethene (ISO)

triptonide (ISO)

trovafloxacin (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

bicarbonate transport (IBA,IEA,ISO)

cardiac conduction (IEA,ISO)

chloride transmembrane transport (IEA)

pH reduction (IEA,ISO,ISS)

regulation of cardiac muscle cell action potential (IEA,ISO,ISS)

regulation of intracellular pH (IBA,IEA,ISO)

transmembrane transport (IBA)

Cellular Component

external side of plasma membrane (IEA,ISO)

plasma membrane (IBA,IDA,ISO)

Molecular Function

bicarbonate transmembrane transporter activity (ISO)

chloride:bicarbonate antiporter activity (IDA,IEA,ISO)

enzyme binding (IPI)

protein binding (ISO)

transmembrane transporter activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	cDNA cloning and tissue distribution of mRNAs for two proteins that are related to the band 3 Cl-/HCO3- exchanger.	Kudrycki KE, etal., J Biol Chem 1990 Jan 5;265(1):462-71.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	Interactions of transmembrane carbonic anhydrase, CAIX, with bicarbonate transporters.	Morgan PE, etal., Am J Physiol Cell Physiol. 2007 Aug;293(2):C738-48. Epub 2007 Jul 25.
6.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
7.	GOA pipeline	RGD automated data pipeline
8.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
10.	Chromosomal mapping of the rat Slc4a family of anion exchanger genes, Ae1, Ae2, and Ae3.	Simon JS, etal., Mamm Genome 1996 May;7(5):380-2.
11.	Transport activity of AE3 chloride/bicarbonate anion-exchange proteins and their regulation by intracellular pH.	Sterling D and Casey JR, Biochem J. 1999 Nov 15;344 Pt 1(Pt 1):221-9.

Additional References at PubMed

PMID:2686841	PMID:21608017	PMID:22693949	PMID:22871113	PMID:29167417

Genomics

Comparative Map Data

Slc4a3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	84,484,749 - 84,497,746 (+)	NCBI		GRCr8
mRatBN7.2	9	77,036,243 - 77,053,940 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	77,037,016 - 77,049,105 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	85,481,242 - 85,493,343 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	90,610,117 - 90,622,218 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	88,996,301 - 89,008,402 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	82,742,207 - 82,755,119 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	82,741,920 - 82,755,153 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	82,512,289 - 82,524,380 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	74,823,769 - 74,835,860 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	74,983,838 - 74,995,930 (+)	NCBI
Celera	9	74,606,698 - 74,618,789 (+)	NCBI		Celera
Cytogenetic Map	9	q33	NCBI

SLC4A3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	219,627,630 - 219,641,971 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	219,627,394 - 219,641,980 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	220,492,352 - 220,506,693 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	220,200,536 - 220,214,946 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	220,317,791 - 220,332,197	NCBI
Celera	2	214,262,260 - 214,276,669 (+)	NCBI		Celera
Cytogenetic Map	2	q35	NCBI
HuRef	2	212,345,224 - 212,359,627 (+)	NCBI		HuRef
CHM1_1	2	220,498,113 - 220,512,522 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	220,112,359 - 220,126,699 (+)	NCBI		T2T-CHM13v2.0

Slc4a3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	75,522,688 - 75,536,075 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	75,522,910 - 75,538,816 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	75,546,044 - 75,559,431 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	75,546,266 - 75,562,172 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	75,542,841 - 75,556,006 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	75,429,444 - 75,442,227 (+)	NCBI		MGSCv36	mm8
Celera	1	76,037,295 - 76,050,423 (+)	NCBI		Celera
Cytogenetic Map	1	C4	NCBI
cM Map	1	39.16	NCBI

Slc4a3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955453	13,843,556 - 13,859,705 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955453	13,846,444 - 13,859,707 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC4A3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	122,257,661 - 122,272,044 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	122,272,628 - 122,287,010 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	106,884,750 - 106,899,143 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	225,475,148 - 225,489,189 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	225,475,148 - 225,489,189 (+)	Ensembl	panpan1.1		panPan2

SLC4A3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	26,136,589 - 26,149,312 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	26,136,412 - 26,149,312 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	26,962,037 - 26,974,762 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	26,151,769 - 26,167,414 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	26,151,769 - 26,165,924 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	26,055,607 - 26,068,323 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	25,991,659 - 26,004,366 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	26,012,382 - 26,025,125 (+)	NCBI		UU_Cfam_GSD_1.0

Slc4a3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	175,650,060 - 175,662,989 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936569	1,992,814 - 2,008,800 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936569	1,992,850 - 2,005,770 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC4A3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	121,630,316 - 121,643,539 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	121,629,794 - 121,643,554 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

SLC4A3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	105,528,845 - 105,543,657 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	105,529,093 - 105,543,405 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	93,858,750 - 93,872,999 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc4a3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624823	5,439,336 - 5,453,801 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624823	5,440,213 - 5,453,683 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Slc4a3
61 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	51
Count of miRNA genes:	41
Interacting mature miRNAs:	49
Transcripts:	ENSRNOT00000027337
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10054125	Srcrt7	Stress Responsive Cort QTL 7	3.33	0.0011	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	9	1	87073594	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	22071169	86369743	Rat
7207814	Bmd91	Bone mineral density QTL 91	3.5		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	9	23754144	83851531	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	25268044	79271759	Rat
724544	Uae9	Urinary albumin excretion QTL 9	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	9	25268044	114175309	Rat
731164	Uae25	Urinary albumin excretion QTL 25	3.5	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	25661188	100929786	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	32535505	77535505	Rat
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	32535505	77535505	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	36962359	77814038	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	36962359	92058970	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	36962359	95410867	Rat
6903941	Pur31	Proteinuria QTL 31		0.036	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	9	40194188	85194188	Rat
11353949	Bp393	Blood pressure QTL 393			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	40194188	85194188	Rat
61352	Bp34	Blood pressure QTL 34	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	42495343	79271511	Rat
10058949	Gmadr5	Adrenal mass QTL 5	2	0.014	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	9	42791513	87976209	Rat
11353951	Bp394	Blood pressure QTL 394			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	44649921	89649921	Rat
12879506	Pur33	Proteinuria QTL 33			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	9	44649921	89649921	Rat
11353957	Bmd92	Bone mineral density QTL 92		0.01	tibia mineral mass (VT:1000283)	volumetric bone mineral density (CMO:0001553)	9	46114199	91114199	Rat
631656	Bp108	Blood pressure QTL 108	5.97	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	48598251	93598251	Rat
2303180	Bp333	Blood pressure QTL 333		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	56627713	78595166	Rat
2303180	Bp333	Blood pressure QTL 333		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	9	56627713	78595166	Rat
2303180	Bp333	Blood pressure QTL 333		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	56627713	78595166	Rat
1578760	Cm53	Cardiac mass QTL 53	3.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	56771635	101771635	Rat
724515	Uae16	Urinary albumin excretion QTL 16	8		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	58163035	100929646	Rat
1300134	Bp185	Blood pressure QTL 185	3.73		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	61381434	104821652	Rat
1581580	Uae34	Urinary albumin excretion QTL 34			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	62072275	96470995	Rat
1578757	Pur6	Proteinuria QTL 6	3.3	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	9	62072275	96470995	Rat
61385	Edpm9	Estrogen-dependent pituitary mass QTL 9	3.43	0.05	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	63869687	108869687	Rat
731171	Glom6	Glomerulus QTL 6	2.8	0.0003	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	9	64573531	109573531	Rat
1354626	Bvd1	Brain ventricular dilatation QTL 1	3.73	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	9	75712843	111552878	Rat

Markers in Region

D9Bro1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	77,026,343 - 77,026,453 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	82,732,357 - 82,732,466	NCBI	Rnor6.0
Rnor_5.0	9	82,501,618 - 82,501,727	UniSTS	Rnor5.0
RGSC_v3.4	9	74,813,098 - 74,813,207	UniSTS	RGSC3.4
RGSC_v3.4	9	74,813,097 - 74,813,207	RGD	RGSC3.4
RGSC_v3.1	9	74,973,168 - 74,973,277	RGD
RH 3.4 Map	9	757.3	RGD
RH 3.4 Map	9	757.3	UniSTS
Cytogenetic Map	9	q33	UniSTS
Cytogenetic Map	9	q34	UniSTS

D9Mco24

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	77,044,883 - 77,045,128 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	82,750,896 - 82,751,142	NCBI	Rnor6.0
Rnor_5.0	9	82,520,157 - 82,520,403	UniSTS	Rnor5.0
RGSC_v3.4	9	74,831,637 - 74,831,883	UniSTS	RGSC3.4
Celera	9	74,614,566 - 74,614,812	UniSTS
Cytogenetic Map	9	q34	UniSTS

RH144096

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	77,047,808 - 77,048,901 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	82,753,823 - 82,754,915	NCBI	Rnor6.0
Rnor_5.0	9	82,523,084 - 82,524,176	UniSTS	Rnor5.0
RGSC_v3.4	9	74,834,564 - 74,835,656	UniSTS	RGSC3.4
Celera	9	74,617,493 - 74,618,585	UniSTS
RH 3.4 Map	9	766.3	UniSTS
Cytogenetic Map	9	q34	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium		43	9	2		2			66	20	32
Low	3		17	8	19	8	8	11	8	15	9	11	8
Below cutoff			31	31		31

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_017049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245149	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596276	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596278	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596279	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596280	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596281	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266651	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC112361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	J05167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000027337 ⟹ ENSRNOP00000027337

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	77,037,016 - 77,049,105 (+)	Ensembl
Rnor_6.0 Ensembl	9	82,741,920 - 82,755,153 (+)	Ensembl

RefSeq Acc Id:

NM_017049 ⟹ NP_058745

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	84,485,655 - 84,497,746 (+)	NCBI
mRatBN7.2	9	77,037,016 - 77,049,105 (+)	NCBI
Rnor_6.0	9	82,743,028 - 82,755,119 (+)	NCBI
Rnor_5.0	9	82,512,289 - 82,524,380 (+)	NCBI
RGSC_v3.4	9	74,823,769 - 74,835,860 (+)	RGD
Celera	9	74,606,698 - 74,618,789 (+)	RGD

Sequence:

show sequence

TAGTGACTGAGACTCCTAAGTCTTCAGCCCAACCATGGCTAATGGGGTGATCCCACCGCCCGGG
GGGCCCTCCCCCCTACCCCAGGTCCGGGTGCCCTTGGAGGAGCCCCCACTGGGTCCAGATGTAG
AAGAGGAGGATGATGACTTGGGCAAGACCTTGGCTGTGAGCAGGTTTGGGGACCTCATCAGCAA
GACCCCGGCCTGGGACCCTGAGAAGCCTAGCCGCAGCTACAGCGAGCGCGACTTTGAGTTTCAC
CGGCACACATCCCACCACACCCATCACCCGCTCTCAGCCCGCCTGCCTCCACCCCACAAGCTAC
GGCGACTGCCCCCCACCTCTGCTCGGCACGCCAGGAGGAAGAGGAAGAAAGAGAAAACCTCTGC
TCCCCCCTCAGAAGGGACACCCCCTATCCAGGAGGAGGGGGGAGCTGGAGCAGAAGAGGAGGAG
GAGGAAGAGGAGGAAGAAGAGGGAGAGTCTGAGGCAGAGCCTGTGGAGCCTCCACCCCCAGGGC
CACCACAGAAAGCAAAGTTCTCCATTGGAAGTGATGAGGATGACAGCCCAGGTCTTTCTATCAA
GGCTCCCTGTGCCAAGGCCCTGCCTTCCGTGGGCCTGCCGTCTGACCAGAGTCCCCAGCGCTCC
GGCAGCTCCCCCAGTCCCCGGGCCCGGGCTTCCCGAATCTCTACAGAGAAGAGTCGACCCTGGA
GTCCATCAGCCAGCTATGACCTGCGGGAGCGATTGTGCCCAGGCAGTGCCCTGGGCAACCCTGG
GCCAGAGCAGCGGGTGCCCACTGATGAGGCGGAGGCTCAAATGCTGGGTTCTGCCGATCTGGAC
GACATGAAGAGTCATCGGCTGGAGGACAACCCCGGAGTGCGGCGACACTTGGTGAAGAAACCAT
CCCGGATACAGGGTGGGAGAGGCAGCCCCAGTGGCCTGGCGCCCATCTTGCGCAGGAAAAAGAA
GAAGAAGAAGCTGGATCGGAGGCCTCATGAGGTGTTCGTGGAGCTGAATGAACTGATGTTGGAC
CGGAGCCAGGAGCCACACTGGCGGGAGACAGCACGCTGGATCAAGTTCGAAGAGGATGTGGAGG
AGGAGACAGAGCGCTGGGGGAAGCCTCATGTTGCTTCGCTCTCCTTCCGTAGCCTCCTGGAGCT
TAGGAGGACCATTGCCCAGGGAGCGGCTCTCCTGGACCTGGAGCAGACCACCCTGCCGGGCATC
GCTCACCTTGTGGTGGAGACCATGATTGTATCTGACCAGATCCGGCCCGAGGACAGGGCTAGCG
TTCTGAGAACTCTGCTCCTGAAACACAGCCATCCCAACGATGACAAGGACAGTGGCTTTTTCCC
TCGAAATCCGTCAAGCTCCAGTGTGAACTCAGTCTTGGGGAATCACCACCCAACTCCTAGTCAT
GGCCCTGATGGTGCAGTACCCACCATGGCTGATGACCTAGGGGAGCCAGCCCCATTGTGGCCAC
ATGACCCTGATGCAAAGGAGAAGCCCCTCCACATGCCTGGGGGAGACGGTCACCGGGGGAAAAG
CCTGAAACTGCTGGAGAAGATCCCTGAGGACGCTGAGGCCACTGTCGTGCTTGTGGGCAGCGTG
CCTTTCTTGGAGCAGCCAGCAGCAGCTTTTGTGAGGCTCAGCGAGGCTGTTCTCTTGGAGTCTG
TGCTGGAGGTCCCCGTGCCTGTTCGCTTCCTCTTCGTGATGCTGGGGCCCAGCCATACCAGCAC
CGACTATCACGAGCTAGGGCGCTCCATTGCCACGCTCATGTCTGACAAGCTGTTTCACGAGGCT
GCCTACCAGGCAGATGACCGGCAGGACCTTTTGGGTGCCATCAGCGAGTTTTTGGACGGTAGCA
TTGTGATTCCCCCATCGGAGGTAGAGGGCCGAGACCTACTCCGTTCCGTGGCTGCCTTCCAGCG
AGAGCTGCTGAGGAAGCGACGGGAGCGGGAACAGACCAAAGTGGAGATGACCACCCGGGGAGGC
TATGTGGCCCCTGGCAAAGAACTGTCTTTGGAGATGGGAGGCTCCGAGGCAACCTCTGAAGATG
ATCCCCTGCAGCGGACAGGCTCAGTGTTTGGGGGGCTAGTACGGGATGTGAAGCGCCGGTACCC
ACACTACCCCAGTGACCTACGGGATGCACTGCACTCTCAGTGTGTGGCTGCCGTGCTGTTCATT
TATTTCGCAGCCCTCAGCCCTGCTATTACCTTTGGGGGTCTGCTAGGAGAGAAGACTGAGGGGC
TGATGGGTGTGTCAGAGCTGATTGTGTCCACGGCTGTGCTTGGGGTTCTCTTCTCTCTGCTGGG
GGCCCAGCCGCTGCTCGTGGTGGGCTTCTCTGGCCCTCTGCTGGTCTTCGAAGAAGCTTTCTTC
AAGTTCTGCCGAGCTCAGGACCTGGAATACCTCACCGGTCGAGTGTGGGTGGGCCTCTGGCTGG
TGGTCTTCGTCCTGGCCCTGGTGGCGGCTGAGGGCAGCTTCCTTGTCCGCTACATCTCGCCATT
TACCCAGGAGATCTTCGCTTTCCTCATCTCACTAATTTTCATCTATGAGACTTTCCACAAGCTC
TATAAGGTGTTCACAGAGCATCCTTTGCTGCCCTTCTACCCACCGGAGGAGGCCCTGGAGCCTG
GCTTGGAACTGAATAGTAGTGCCCTGCCCCCCACAGAGGGACCACCAGGTCCCCGGAACCAGCC
CAATACAGCTCTGCTGTCCCTCATCCTCATGCTGGGGACTTTCCTCATTGCCTTCTTCCTGCGA
AAGTTCAGGAACAGCCGCTTCCTGGGGGGCAAGGCTCGGCGCGTCATCGGGGACTTCGGCATTC
CCATCTCCATCCTGGTGATGGTCCTTGTGGATTACTCTATCACAGACACCTACACACAGAAGCT
GACGGTGCCTACAGGGCTCTCAGTGACTTCCCCGCATAAGCGCACGTGGTTCATCCCACCCTTG
GGCAGTGCCCGCCCCTTCCCACCATGGATGATGGTGGCTGCTGCTGTCCCTGCACTCTTGGTCC
TCATCCTGATATTCATGGAGACTCAGATCACTGCGCTCATCGTCAGCCAGAAGGCACGGAGGCT
ACTCAAGGGTTCCGGCTTCCATCTTGACCTGCTGTTGATTGGCTCTTTGGGTGGCCTCTGTGGG
CTCTTCGGCTTGCCCTGGCTCACAGCCGCCACTGTCCGCTCTGTCACCCATGTCAACGCGTTGA
CGGTGATGCGTACTGCCATTGCACCTGGTGACAAGCCCCAGATCCAGGAGGTGCGGGAGCAGCG
AGTCACCGGGGTGCTCATTGCCAGCCTCGTGGGTCTGTCTATCGTCATGGGAGCTGTGCTGCGC
AGGATCCCGTTGGCCGTGCTCTTTGGGATTTTCCTGTACATGGGAGTCACATCACTGTCTGGTA
TCCAGTTGTCCCAGCGTCTGCTGCTCATTTTCATGCCAGCCAAGCATCACCCCGAGCAGCCCTA
CGTGACCAAGGTGAAGACATGGAGGATGCACCTGTTCACCTTCATCCAGCTGGGCTGCATCGCG
CTCCTCTGGGTGGTCAAGTCAACGGTGGCCTCACTGGCCTTTCCCTTCCTGCTCTTGCTCACGG
TGCCTCTGAGGCGTTGCCTTTTGCCCCGGCTCTTCCAGGACAGGGAGCTGCAGGCGCTGGACTC
TGAAGACGCAGAGCCAAACTTTGATGAGGATGGTCAGGATGAGTACAATGAGCTCCACATGCCT
GTGTGACCCTCAAGATGGTGGCCCTCCGAGACCCCACCTTGGTGACTCACCTCAGGACCCAGGG
ATGTGCCTGGAGTCACTGCCCATGCCAGGACAGTGGCCCCTTGACTTTCACAGCCCAGACGGCA
CCGGCTTTGAAGTCATTATAACACACTCCTTGTCTTG

hide sequence

RefSeq Acc Id:

XM_006245149 ⟹ XP_006245211

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	84,488,351 - 84,497,746 (+)	NCBI
mRatBN7.2	9	77,039,690 - 77,053,940 (+)	NCBI
Rnor_6.0	9	82,745,232 - 82,755,119 (+)	NCBI
Rnor_5.0	9	82,512,289 - 82,524,380 (+)	NCBI

Sequence:

show sequence

GAGACCCTGTGGCAGAGAGAGCTTAATTCGACTAAGCCACCTCTCTGCCAGAGCTTTTCCCTTA
GTGTCACTCAGGAGTGCTGTCTGAGCCACCTACTGCATAAATCCACCCTGTTCCACACACACTC
CTGGAGGAGAGCTCTCCTAAGGCCTCCCGCCTTTATAAACTCTACGCTAACCCACTTGCCTGGA
GGCTGAGGGCTGAGCTGCCCTGCCGGCCCCTTCTCCCCAAGCCAGGCCTGCTGCTACCCTCACT
CCTTCCTACCACCCTTGCCCTGGCCTGGCTGTGATCTCGGCACATTCCTTCCATCTTATCAGTG
CCTGGCTCTGGTGCCACCTGTCATCACCCACGGGGCTCTGTGCCCAGGCTAGGGGCATCACTGG
TCTCCTGCCTCCTCCTCCTCCTAAGGTTCACAGGGTGTGGGCGGGGGCAGAGGGGGGGGAGTTA
GGGCTTTGAGCTCAATACGTCATGGAAAGTTGCCAGGGCCTGAGGACAGGGACAGGAACAATCC
GATGGCAGCAGCAGTGGGATTGGGGGAGTCATAGGGAGGGTGTATATAGGGGGACAAGGAGAGT
TGGGAGCAGGAAACCTTACCACGTCCAGCTCTGTGTGGGCAAAGGCAGTTCCGGTAGGGTCTCC
CACTTTTTGGGACAGCCAGGACTGAGGCCTTGGCCACCAGGGGAATGACAAGCCCTCTGGACAA
GGTCATGGAGCCCAATGGAGCTCTGGGTCCTAAGCCTGGGGACACTGAAGACCGAGGCCCTGGG
AGGAATCCAGCCCCTGGCACTGGTGACTTAGTGGCCTCAGAGGATTTGGAAATGTTTGTACTGG
ACTTTGAAGACTATGGCCTGTGGGAGCCCATGAGGGGCCACCCGAGCCCCCTGGCAGGGGTAGC
TGCTTGTCATCGGCTGGAGGACAACCCCGGAGTGCGGCGACACTTGGTGAAGAAACCATCCCGG
ATACAGGGTGGGAGAGGCAGCCCCAGTGGCCTGGCGCCCATCTTGCGCAGGAAAAAGAAGAAGA
AGAAGCTGGATCGGAGGCCTCATGAGGTGTTCGTGGAGCTGAATGAACTGATGTTGGACCGGAG
CCAGGAGCCACACTGGCGGGAGACAGCACGCTGGATCAAGTTCGAAGAGGATGTGGAGGAGGAG
ACAGAGCGCTGGGGGAAGCCTCATGTTGCTTCGCTCTCCTTCCGTAGCCTCCTGGAGCTTAGGA
GGACCATTGCCCAGGGAGCGGCTCTCCTGGACCTGGAGCAGACCACCCTGCCGGGCATCGCTCA
CCTTGTGGTGGAGACCATGATTGTATCTGACCAGATCCGGCCCGAGGACAGGGCTAGCGTTCTG
AGAACTCTGCTCCTGAAACACAGCCATCCCAACGATGACAAGGACAGTGGCTTTTTCCCTCGAA
ATCCGTCAAGCTCCAGTGTGAACTCAGTCTTGGGGAATCACCACCCAACTCCTAGTCATGGCCC
TGATGGTGCAGTACCCACCATGGCTGATGACCTAGGGGAGCCAGCCCCATTGTGGCCACATGAC
CCTGATGCAAAGGAGAAGCCCCTCCACATGCCTGGGGGAGACGGTCACCGGGGGAAAAGCCTGA
AACTGCTGGAGAAGATCCCTGAGGACGCTGAGGCCACTGTCGTGCTTGTGGGCAGCGTGCCTTT
CTTGGAGCAGCCAGCAGCAGCTTTTGTGAGGCTCAGCGAGGCTGTTCTCTTGGAGTCTGTGCTG
GAGGTCCCCGTGCCTGTTCGCTTCCTCTTCGTGATGCTGGGGCCCAGCCATACCAGCACCGACT
ATCACGAGCTAGGGCGCTCCATTGCCACGCTCATGTCTGACAAGCTGTTTCACGAGGCTGCCTA
CCAGGCAGATGACCGGCAGGACCTTTTGGGTGCCATCAGCGAGTTTTTGGACGGTAGCATTGTG
ATTCCCCCATCGGAGGTAGAGGGCCGAGACCTACTCCGTTCCGTGGCTGCCTTCCAGCGAGAGC
TGCTGAGGAAGCGACGGGAGCGGGAACAGACCAAAGTGGAGATGACCACCCGGGGAGGCTATGT
GGCCCCTGGCAAAGAACTGTCTTTGGAGATGGGAGGCTCCGAGGCAACCTCTGAAGATGATCCC
CTGCAGCGGACAGGCTCAGTGTTTGGGGGGCTAGTACGGGATGTGAAGCGCCGGTACCCACACT
ACCCCAGTGACCTACGGGATGCACTGCACTCTCAGTGTGTGGCTGCCGTGCTGTTCATTTATTT
CGCAGCCCTCAGCCCTGCTATTACCTTTGGGGGTCTGCTAGGAGAGAAGACTGAGGGGCTGATG
GGTGTGTCAGAGCTGATTGTGTCCACGGCTGTGCTTGGGGTTCTCTTCTCTCTGCTGGGGGCCC
AGCCGCTGCTCGTGGTGGGCTTCTCTGGCCCTCTGCTGGTCTTCGAAGAAGCTTTCTTCAAGTT
CTGCCGAGCTCAGGACCTGGAATACCTCACCGGTCGAGTGTGGGTGGGCCTCTGGCTGGTGGTC
TTCGTCCTGGCCCTGGTGGCGGCTGAGGGCAGCTTCCTTGTCCGCTACATCTCGCCATTTACCC
AGGAGATCTTCGCTTTCCTCATCTCACTAATTTTCATCTATGAGACTTTCCACAAGCTCTATAA
GGTGTTCACAGAGCATCCTTTGCTGCCCTTCTACCCACCGGAGGAGGCCCTGGAGCCTGGCTTG
GAACTGAATAGTAGTGCCCTGCCCCCCACAGAGGGACCACCAGGTCCCCGGAACCAGCCCAATA
CAGCTCTGCTGTCCCTCATCCTCATGCTGGGGACTTTCCTCATTGCCTTCTTCCTGCGAAAGTT
CAGGAACAGCCGCTTCCTGGGGGGCAAGGCTCGGCGCGTCATCGGGGACTTCGGCATTCCCATC
TCCATCCTGGTGATGGTCCTTGTGGATTACTCTATCACAGACACCTACACACAGAAGCTGACGG
TGCCTACAGGGCTCTCAGTGACTTCCCCGCATAAGCGCACGTGGTTCATCCCACCCTTGGGCAG
TGCCCGCCCCTTCCCACCATGGATGATGGTGGCTGCTGCTGTCCCTGCACTCTTGGTCCTCATC
CTGATATTCATGGAGACTCAGATCACTGCGCTCATCGTCAGCCAGAAGGCACGGAGGCTACTCA
AGGGTTCCGGCTTCCATCTTGACCTGCTGTTGATTGGCTCTTTGGGTGGCCTCTGTGGGCTCTT
CGGCTTGCCCTGGCTCACAGCCGCCACTGTCCGCTCTGTCACCCATGTCAACGCGTTGACGGTG
ATGCGTACTGCCATTGCACCTGGTGACAAGCCCCAGATCCAGGAGGTGCGGGAGCAGCGAGTCA
CCGGGGTGCTCATTGCCAGCCTCGTGGGTCTGTCTATCGTCATGGGAGCTGTGCTGCGCAGGAT
CCCGTTGGCCGTGCTCTTTGGGATTTTCCTGTACATGGGAGTCACATCACTGTCTGGTATCCAG
TTGTCCCAGCGTCTGCTGCTCATTTTCATGCCAGCCAAGCATCACCCCGAGCAGCCCTACGTGA
CCAAGGTGAAGACATGGAGGATGCACCTGTTCACCTTCATCCAGCTGGGCTGCATCGCGCTCCT
CTGGGTGGTCAAGTCAACGGTGGCCTCACTGGCCTTTCCCTTCCTGCTCTTGCTCACGGTGCCT
CTGAGGCGTTGCCTTTTGCCCCGGCTCTTCCAGGACAGGGAGCTGCAGGCGCTGGACTCTGAAG
ACGCAGAGCCAAACTTTGATGAGGATGGTCAGGATGAGTACAATGAGCTCCACATGCCTGTGTG
ACCCTCAAGATGGTGGCCCTCCGAGACCCCACCTTGGTGACTCACCTCAGGACCCAGGGATGTG
CCTGGAGTCACTGCCCATGCCAGGACAGTGGCCCCTTGACTTTCACAGCCCAGACGGCACCGGC
TTTGAAGTCATTATAACACACTCCTTGTCTTG

hide sequence

RefSeq Acc Id:

XM_017596276 ⟹ XP_017451765

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	84,485,232 - 84,497,746 (+)	NCBI
mRatBN7.2	9	77,036,595 - 77,053,940 (+)	NCBI
Rnor_6.0	9	82,742,591 - 82,755,119 (+)	NCBI

Sequence:

show sequence

GGAATCGTCCACTCCCATTGTGCGGCCGGGCGGCGGCCGGCTGGCAGAGCCGAGCTCTAGGAGG
TGGAGCCGTGGACTGCGGGCTCCGGCGCCTGCGTCCGACCTGCCCGGCTCTGCGCGGCGAGAGG
CCGGACGGGAACCCGGCAGCCGCGCCCCGGCGCTAGCGGGGAGGGACATGGGGCGCGGCGGTTC
TCCCAAGCCCCGCAGGTTCCGGAGCCCGGAGGCTCCCCAAGAGGTCTCCGCAGCGCCCCCTTCT
TCTCACCCAGGATTTGGGTCCCGTAGTGACTGAGAGACTCCTAAGTCTTCAGCCCAACCATGGC
TAATGGGGTGATCCCACCGCCCGGGGGCGCCTCCCCCCTACCCCAGGTCCGGGTGCCCTTGGAG
GAGCCCCCACTGGGTCCAGATGTAGAAGAGGAGGATGATGACTTGGGCAAGACCTTGGCTGTGA
GCAGGTTTGGGGACCTCATCAGCAAGACCCCGGCCTGGGACCCTGAGAAGCCTAGCCGCAGCTA
CAGCGAGCGCGACTTTGAGTTTCACCGGCACACATCCCACCACACCCATCACCCGCTCTCAGCC
CGCCTGCCTCCACCCCACAAGCTACGGCGACTGCCCCCCACCTCTGCTCGGCACGCCAGGAGGA
AGAGGAAGAAAGAGAAAACCTCTGCTCCCCCCTCAGAAGGGACACCCCCTATCCAGGAGGAGGG
GGGAGCTGGAGCAGAAGAGGAGGAGGAGGAAGAGGAGGAAGAAGAGGGAGAGTCTGAGGCAGAG
CCTGTGGAGCCTCCACCCCCAGGGCCACCACAGAAAGCAAAGTTCTCCATTGGAAGTGATGAGG
ATGACAGCCCAGGTCTTTCTATCAAGGCTCCCTGTGCCAAGGCCCTGCCTTCCGTGGGCCTGCC
GTCTGACCAGAGTCCCCAGCGCTCCGGCAGCTCCCCCAGTCCCCGGGCCCGGGCTTCCCGAATC
TCTACAGAGAAGAGTCGACCCTGGAGTCCATCAGCCAGCTATGACCTGCGGGAGCGATTGTGCC
CAGGCAGTGCCCTGGGCAACCCTGGGCCAGAGCAGCGGGTGCCCACTGATGAGGCGGAGGCTCA
AATGCTGGGTTCTGCCGATCTGGACGACATGAAGAGTCATCGGCTGGAGGACAACCCCGGAGTG
CGGCGACACTTGGTGAAGAAACCATCCCGGATACAGGGTGGGAGAGGCAGCCCCAGTGGCCTGG
CGCCCATCTTGCGCAGGAAAAAGAAGAAGAAGAAGCTGGATCGGAGGCCTCATGAGGTGTTCGT
GGAGCTGAATGAACTGATGTTGGACCGGAGCCAGGAGCCACACTGGCGGGAGACAGCACGCTGG
ATCAAGTTCGAAGAGGATGTGGAGGAGGAGACAGAGCGCTGGGGGAAGCCTCATGTTGCTTCGC
TCTCCTTCCGTAGCCTCCTGGAGCTTAGGAGGACCATTGCCCAGGGAGCGGCTCTCCTGGACCT
GGAGCAGACCACCCTGCCGGGCATCGCTCACCTTGTGGTGGAGACCATGATTGTATCTGACCAG
ATCCGGCCCGAGGACAGGGCTAGCGTTCTGAGAACTCTGCTCCTGAAACACAGCCATCCCAACG
ATGACAAGGACAGTGGCTTTTTCCCTCGAAATCCGTCAAGCTCCAGTGTGAACTCAGTCTTGGG
GAATCACCACCCAACTCCTAGTCATGGCCCTGATGGTGCAGTACCCACCATGGCTGATGACCTA
GGGGAGCCAGCCCCATTGTGGCCACATGACCCTGATGCAAAGGAGAAGCCCCTCCACATGCCTG
GGGGAGACGGTCACCGGGGGAAAAGCCTGAAACTGCTGGAGAAGATCCCTGAGGACGCTGAGGC
CACTGTCGTGCTTGTGGGCAGCGTGCCTTTCTTGGAGCAGCCAGCAGCAGCTTTTGTGAGGCTC
AGCGAGGCTGTTCTCTTGGAGTCTGTGCTGGAGGTCCCCGTGCCTGTTCGCTTCCTCTTCGTGA
TGCTGGGGCCCAGCCATACCAGCACCGACTATCACGAGCTAGGGCGCTCCATTGCCACGCTCAT
GTCTGACAAGCTGTTTCACGAGGCTGCCTACCAGGCAGATGACCGGCAGGACCTTTTGGGTGCC
ATCAGCGAGTTTTTGGACGGTAGCATTGTGATTCCCCCATCGGAGGTAGAGGGCCGAGACCTAC
TCCGTTCCGTGGCTGCCTTCCAGCGAGAGCTGCTGAGGAAGCGACGGGAGCGGGAACAGACCAA
AGTGGAGATGACCACCCGGGGAGGCTATGTGGCCCCTGGCAAAGAACTGTCTTTGGAGATGGGA
GGCTCCGAGGCAACCTCTGAAGATGATCCCCTGCAGCGGACAGGCTCAGTGTTTGGGGGGCTAG
TACGGGATGTGAAGCGCCGGTACCCACACTACCCCAGTGACCTACGGGATGCACTGCACTCTCA
GTGTGTGGCTGCCGTGCTGTTCATTTATTTCGCAGCCCTCAGCCCTGCTATTACCTTTGGGGGT
CTGCTAGGAGAGAAGACTGAGGGGCTGATGGGTGTGTCAGAGCTGATTGTGTCCACGGCTGTGC
TTGGGGTTCTCTTCTCTCTGCTGGGGGCCCAGCCGCTGCTCGTGGTGGGCTTCTCTGGCCCTCT
GCTGGTCTTCGAAGAAGCTTTCTTCAAGTTCTGCCGAGCTCAGGACCTGGAATACCTCACCGGT
CGAGTGTGGGTGGGCCTCTGGCTGGTGGTCTTCGTCCTGGCCCTGGTGGCGGCTGAGGGCAGCT
TCCTTGTCCGCTACATCTCGCCATTTACCCAGGAGATCTTCGCTTTCCTCATCTCACTAATTTT
CATCTATGAGACTTTCCACAAGCTCTATAAGGTGTTCACAGAGCATCCTTTGCTGCCCTTCTAC
CCACCGGAGGAGGCCCTGGAGCCTGGCTTGGAACTGAATAGTAGTGCCCTGCCCCCCACAGAGG
GACCACCAGGTCCCCGGAACCAGCCCAATACAGCTCTGCTGTCCCTCATCCTCATGCTGGGGAC
TTTCCTCATTGCCTTCTTCCTGCGAAAGTTCAGGAACAGCCGCTTCCTGGGGGGCAAGGCTCGG
CGCGTCATCGGGGACTTCGGCATTCCCATCTCCATCCTGGTGATGGTCCTTGTGGATTACTCTA
TCACAGACACCTACACACAGAAGCTGACGGTGCCTACAGGGCTCTCAGTGACTTCCCCGCATAA
GCGCACGTGGTTCATCCCACCCTTGGGCAGTGCCCGCCCCTTCCCACCATGGATGATGGTGGCT
GCTGCTGTCCCTGCACTCTTGGTCCTCATCCTGATATTCATGGAGACTCAGATCACTGCGCTCA
TCGTCAGCCAGAAGGCACGGAGGCTACTCAAGGGTTCCGGCTTCCATCTTGACCTGCTGTTGAT
TGGCTCTTTGGGTGGCCTCTGTGGGCTCTTCGGCTTGCCCTGGCTCACAGCCGCCACTGTCCGC
TCTGTCACCCATGTCAACGCGTTGACGGTGATGCGTACTGCCATTGCACCTGGTGACAAGCCCC
AGATCCAGGAGGTGCGGGAGCAGCGAGTCACCGGGGTGCTCATTGCCAGCCTCGTGGGTCTGTC
TATCGTCATGGGAGCTGTGCTGCGCAGGATCCCGTTGGCCGTGCTCTTTGGGATTTTCCTGTAC
ATGGGAGTCACATCACTGTCTGGTATCCAGTTGTCCCAGCGTCTGCTGCTCATTTTCATGCCAG
CCAAGCATCACCCCGAGCAGCCCTACGTGACCAAGGTGAAGACATGGAGGATGCACCTGTTCAC
CTTCATCCAGCTGGGCTGCATCGCGCTCCTCTGGGTGGTCAAGTCAACGGTGGCCTCACTGGCC
TTTCCCTTCCTGCTCTTGCTCACGGTGCCTCTGAGGCGTTGCCTTTTGCCCCGGCTCTTCCAGG
ACAGGGAGCTGCAGGCGCTGGACTCTGAAGACGCAGAGCCAAACTTTGATGAGGATGGTCAGGA
TGAGTACAATGAGCTCCACATGCCTGTGTGACCCTCAAGATGGTGGCCCTCCGAGACCCCACCT
TGGTGACTCACCTCAGGACCCAGGGATGTGCCTGGAGTCACTGCCCATGCCAGGACAGTGGCCC
CTTGACTTTCACAGCCCAGACGGCACCGGCTTTGAAGTCATTATAACACACTCCTTGTCTTG

hide sequence

RefSeq Acc Id:

XM_017596277 ⟹ XP_017451766

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	84,484,880 - 84,497,746 (+)	NCBI
mRatBN7.2	9	77,036,243 - 77,053,940 (+)	NCBI
Rnor_6.0	9	82,742,207 - 82,755,119 (+)	NCBI

Sequence:

show sequence

TCTGGCTACAGATGGGTAGATACTGTGCCAAGGTCAAATGTTGGGTGGCACCCAGCGCCAGAAG
CCAGGCCTTTGAAGGGCATCAGCTGAACTGGAGGTGTTGATGGCAAATGCTTTCAGGGGTCTGT
GATCTTGGAAACGGGCCCAAGCTGGAGAGGCTTGTTTGCGCGAAGAGGGTCTCCTCCAGGGCTC
CTGAGGGAAAGGGAGGGGTGGCTAAAAGCAAGGTGGAGGAGTGCGTTTGAGGGATTGTGGGAAT
TTAGGGCCGTGCACCCGCCCCTCCTCCCCCCGCAATGCGTGGGGCGCCTGGAAAGGGGTCTTGC
GGGCAGGTGGGATCCTGCGGGGACCCGAGCGCCGGGCCCATGCTGGCCCAGTCGGGGCTCCCCA
AGAGGTCTCCGCAGCGCCCCCTTCTTCTCACCCAGGATTTGGGTCCCGTAGTGACTGAGAGACT
CCTAAGTCTTCAGCCCAACCATGGCTAATGGGGTGATCCCACCGCCCGGGGGCGCCTCCCCCCT
ACCCCAGGTCCGGGTGCCCTTGGAGGAGCCCCCACTGGGTCCAGATGTAGAAGAGGAGGATGAT
GACTTGGGCAAGACCTTGGCTGTGAGCAGGTTTGGGGACCTCATCAGCAAGACCCCGGCCTGGG
ACCCTGAGAAGCCTAGCCGCAGCTACAGCGAGCGCGACTTTGAGTTTCACCGGCACACATCCCA
CCACACCCATCACCCGCTCTCAGCCCGCCTGCCTCCACCCCACAAGCTACGGCGACTGCCCCCC
ACCTCTGCTCGGCACGCCAGGAGGAAGAGGAAGAAAGAGAAAACCTCTGCTCCCCCCTCAGAAG
GGACACCCCCTATCCAGGAGGAGGGGGGAGCTGGAGCAGAAGAGGAGGAGGAGGAAGAGGAGGA
AGAAGAGGGAGAGTCTGAGGCAGAGCCTGTGGAGCCTCCACCCCCAGGGCCACCACAGAAAGCA
AAGTTCTCCATTGGAAGTGATGAGGATGACAGCCCAGGTCTTTCTATCAAGGCTCCCTGTGCCA
AGGCCCTGCCTTCCGTGGGCCTGCCGTCTGACCAGAGTCCCCAGCGCTCCGGCAGCTCCCCCAG
TCCCCGGGCCCGGGCTTCCCGAATCTCTACAGAGAAGAGTCGACCCTGGAGTCCATCAGCCAGC
TATGACCTGCGGGAGCGATTGTGCCCAGGCAGTGCCCTGGGCAACCCTGGGCCAGAGCAGCGGG
TGCCCACTGATGAGGCGGAGGCTCAAATGCTGGGTTCTGCCGATCTGGACGACATGAAGAGTCA
TCGGCTGGAGGACAACCCCGGAGTGCGGCGACACTTGGTGAAGAAACCATCCCGGATACAGGGT
GGGAGAGGCAGCCCCAGTGGCCTGGCGCCCATCTTGCGCAGGAAAAAGAAGAAGAAGAAGCTGG
ATCGGAGGCCTCATGAGGTGTTCGTGGAGCTGAATGAACTGATGTTGGACCGGAGCCAGGAGCC
ACACTGGCGGGAGACAGCACGCTGGATCAAGTTCGAAGAGGATGTGGAGGAGGAGACAGAGCGC
TGGGGGAAGCCTCATGTTGCTTCGCTCTCCTTCCGTAGCCTCCTGGAGCTTAGGAGGACCATTG
CCCAGGGAGCGGCTCTCCTGGACCTGGAGCAGACCACCCTGCCGGGCATCGCTCACCTTGTGGT
GGAGACCATGATTGTATCTGACCAGATCCGGCCCGAGGACAGGGCTAGCGTTCTGAGAACTCTG
CTCCTGAAACACAGCCATCCCAACGATGACAAGGACAGTGGCTTTTTCCCTCGAAATCCGTCAA
GCTCCAGTGTGAACTCAGTCTTGGGGAATCACCACCCAACTCCTAGTCATGGCCCTGATGGTGC
AGTACCCACCATGGCTGATGACCTAGGGGAGCCAGCCCCATTGTGGCCACATGACCCTGATGCA
AAGGAGAAGCCCCTCCACATGCCTGGGGGAGACGGTCACCGGGGGAAAAGCCTGAAACTGCTGG
AGAAGATCCCTGAGGACGCTGAGGCCACTGTCGTGCTTGTGGGCAGCGTGCCTTTCTTGGAGCA
GCCAGCAGCAGCTTTTGTGAGGCTCAGCGAGGCTGTTCTCTTGGAGTCTGTGCTGGAGGTCCCC
GTGCCTGTTCGCTTCCTCTTCGTGATGCTGGGGCCCAGCCATACCAGCACCGACTATCACGAGC
TAGGGCGCTCCATTGCCACGCTCATGTCTGACAAGCTGTTTCACGAGGCTGCCTACCAGGCAGA
TGACCGGCAGGACCTTTTGGGTGCCATCAGCGAGTTTTTGGACGGTAGCATTGTGATTCCCCCA
TCGGAGGTAGAGGGCCGAGACCTACTCCGTTCCGTGGCTGCCTTCCAGCGAGAGCTGCTGAGGA
AGCGACGGGAGCGGGAACAGACCAAAGTGGAGATGACCACCCGGGGAGGCTATGTGGCCCCTGG
CAAAGAACTGTCTTTGGAGATGGGAGGCTCCGAGGCAACCTCTGAAGATGATCCCCTGCAGCGG
ACAGGCTCAGTGTTTGGGGGGCTAGTACGGGATGTGAAGCGCCGGTACCCACACTACCCCAGTG
ACCTACGGGATGCACTGCACTCTCAGTGTGTGGCTGCCGTGCTGTTCATTTATTTCGCAGCCCT
CAGCCCTGCTATTACCTTTGGGGGTCTGCTAGGAGAGAAGACTGAGGGGCTGATGGGTGTGTCA
GAGCTGATTGTGTCCACGGCTGTGCTTGGGGTTCTCTTCTCTCTGCTGGGGGCCCAGCCGCTGC
TCGTGGTGGGCTTCTCTGGCCCTCTGCTGGTCTTCGAAGAAGCTTTCTTCAAGTTCTGCCGAGC
TCAGGACCTGGAATACCTCACCGGTCGAGTGTGGGTGGGCCTCTGGCTGGTGGTCTTCGTCCTG
GCCCTGGTGGCGGCTGAGGGCAGCTTCCTTGTCCGCTACATCTCGCCATTTACCCAGGAGATCT
TCGCTTTCCTCATCTCACTAATTTTCATCTATGAGACTTTCCACAAGCTCTATAAGGTGTTCAC
AGAGCATCCTTTGCTGCCCTTCTACCCACCGGAGGAGGCCCTGGAGCCTGGCTTGGAACTGAAT
AGTAGTGCCCTGCCCCCCACAGAGGGACCACCAGGTCCCCGGAACCAGCCCAATACAGCTCTGC
TGTCCCTCATCCTCATGCTGGGGACTTTCCTCATTGCCTTCTTCCTGCGAAAGTTCAGGAACAG
CCGCTTCCTGGGGGGCAAGGCTCGGCGCGTCATCGGGGACTTCGGCATTCCCATCTCCATCCTG
GTGATGGTCCTTGTGGATTACTCTATCACAGACACCTACACACAGAAGCTGACGGTGCCTACAG
GGCTCTCAGTGACTTCCCCGCATAAGCGCACGTGGTTCATCCCACCCTTGGGCAGTGCCCGCCC
CTTCCCACCATGGATGATGGTGGCTGCTGCTGTCCCTGCACTCTTGGTCCTCATCCTGATATTC
ATGGAGACTCAGATCACTGCGCTCATCGTCAGCCAGAAGGCACGGAGGCTACTCAAGGGTTCCG
GCTTCCATCTTGACCTGCTGTTGATTGGCTCTTTGGGTGGCCTCTGTGGGCTCTTCGGCTTGCC
CTGGCTCACAGCCGCCACTGTCCGCTCTGTCACCCATGTCAACGCGTTGACGGTGATGCGTACT
GCCATTGCACCTGGTGACAAGCCCCAGATCCAGGAGGTGCGGGAGCAGCGAGTCACCGGGGTGC
TCATTGCCAGCCTCGTGGGTCTGTCTATCGTCATGGGAGCTGTGCTGCGCAGGATCCCGTTGGC
CGTGCTCTTTGGGATTTTCCTGTACATGGGAGTCACATCACTGTCTGGTATCCAGTTGTCCCAG
CGTCTGCTGCTCATTTTCATGCCAGCCAAGCATCACCCCGAGCAGCCCTACGTGACCAAGGTGA
AGACATGGAGGATGCACCTGTTCACCTTCATCCAGCTGGGCTGCATCGCGCTCCTCTGGGTGGT
CAAGTCAACGGTGGCCTCACTGGCCTTTCCCTTCCTGCTCTTGCTCACGGTGCCTCTGAGGCGT
TGCCTTTTGCCCCGGCTCTTCCAGGACAGGGAGCTGCAGGCGCTGGACTCTGAAGACGCAGAGC
CAAACTTTGATGAGGATGGTCAGGATGAGTACAATGAGCTCCACATGCCTGTGTGACCCTCAAG
ATGGTGGCCCTCCGAGACCCCACCTTGGTGACTCACCTCAGGACCCAGGGATGTGCCTGGAGTC
ACTGCCCATGCCAGGACAGTGGCCCCTTGACTTTCACAGCCCAGACGGCACCGGCTTTGAAGTC
ATTATAACACACTCCTTGTCTTG

hide sequence

RefSeq Acc Id:

XM_017596279 ⟹ XP_017451768

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	84,484,749 - 84,497,746 (+)	NCBI
mRatBN7.2	9	77,036,243 - 77,053,940 (+)	NCBI
Rnor_6.0	9	82,742,207 - 82,755,119 (+)	NCBI

Sequence:

show sequence

TCTGGCTACAGATGGGTAGATACTGTGCCAAGGTCAAATGTTGGGTGGCACCCAGCGCCAGAAG
CCAGGCCTTTGAAGGGCATCAGCTGAACTGGAGGTGTTGATGGCAAATGCTTTCAGGGGTCTGT
GATCTTGGAAACGGGCCCAAGCTGGAGAGGCTTGTTTGCGCGAAGAGGGTCTCCTCCAGGGCTC
CTGAGGGAAAGGGAGGGGTGGCTAAAAGCAAGGTGGAGGAGTGCGTTTGAGGGATTGTGGGAAT
TTAGGGCCGTGCACCCGCCCCTCCTCCCCCCGCAATGCGTGGGGCGCCTGGAAAGGGGTCTTGC
GGGCAGGTGGGATCCTGCGGGGACCCGAGCGCCGGGCCCATGCTGGCCCAGTCGGGGATTTGGG
TCCCGTAGTGACTGAGAGACTCCTAAGTCTTCAGCCCAACCATGGCTAATGGGGTGATCCCACC
GCCCGGGGGCGCCTCCCCCCTACCCCAGGTCCGGGTGCCCTTGGAGGAGCCCCCACTGGGTCCA
GATGTAGAAGAGGAGGATGATGACTTGGGCAAGACCTTGGCTGTGAGCAGGTTTGGGGACCTCA
TCAGCAAGACCCCGGCCTGGGACCCTGAGAAGCCTAGCCGCAGCTACAGCGAGCGCGACTTTGA
GTTTCACCGGCACACATCCCACCACACCCATCACCCGCTCTCAGCCCGCCTGCCTCCACCCCAC
AAGCTACGGCGACTGCCCCCCACCTCTGCTCGGCACGCCAGGAGGAAGAGGAAGAAAGAGAAAA
CCTCTGCTCCCCCCTCAGAAGGGACACCCCCTATCCAGGAGGAGGGGGGAGCTGGAGCAGAAGA
GGAGGAGGAGGAAGAGGAGGAAGAAGAGGGAGAGTCTGAGGCAGAGCCTGTGGAGCCTCCACCC
CCAGGGCCACCACAGAAAGCAAAGTTCTCCATTGGAAGTGATGAGGATGACAGCCCAGGTCTTT
CTATCAAGGCTCCCTGTGCCAAGGCCCTGCCTTCCGTGGGCCTGCCGTCTGACCAGAGTCCCCA
GCGCTCCGGCAGCTCCCCCAGTCCCCGGGCCCGGGCTTCCCGAATCTCTACAGAGAAGAGTCGA
CCCTGGAGTCCATCAGCCAGCTATGACCTGCGGGAGCGATTGTGCCCAGGCAGTGCCCTGGGCA
ACCCTGGGCCAGAGCAGCGGGTGCCCACTGATGAGGCGGAGGCTCAAATGCTGGGTTCTGCCGA
TCTGGACGACATGAAGAGTCATCGGCTGGAGGACAACCCCGGAGTGCGGCGACACTTGGTGAAG
AAACCATCCCGGATACAGGGTGGGAGAGGCAGCCCCAGTGGCCTGGCGCCCATCTTGCGCAGGA
AAAAGAAGAAGAAGAAGCTGGATCGGAGGCCTCATGAGGTGTTCGTGGAGCTGAATGAACTGAT
GTTGGACCGGAGCCAGGAGCCACACTGGCGGGAGACAGCACGCTGGATCAAGTTCGAAGAGGAT
GTGGAGGAGGAGACAGAGCGCTGGGGGAAGCCTCATGTTGCTTCGCTCTCCTTCCGTAGCCTCC
TGGAGCTTAGGAGGACCATTGCCCAGGGAGCGGCTCTCCTGGACCTGGAGCAGACCACCCTGCC
GGGCATCGCTCACCTTGTGGTGGAGACCATGATTGTATCTGACCAGATCCGGCCCGAGGACAGG
GCTAGCGTTCTGAGAACTCTGCTCCTGAAACACAGCCATCCCAACGATGACAAGGACAGTGGCT
TTTTCCCTCGAAATCCGTCAAGCTCCAGTGTGAACTCAGTCTTGGGGAATCACCACCCAACTCC
TAGTCATGGCCCTGATGGTGCAGTACCCACCATGGCTGATGACCTAGGGGAGCCAGCCCCATTG
TGGCCACATGACCCTGATGCAAAGGAGAAGCCCCTCCACATGCCTGGGGGAGACGGTCACCGGG
GGAAAAGCCTGAAACTGCTGGAGAAGATCCCTGAGGACGCTGAGGCCACTGTCGTGCTTGTGGG
CAGCGTGCCTTTCTTGGAGCAGCCAGCAGCAGCTTTTGTGAGGCTCAGCGAGGCTGTTCTCTTG
GAGTCTGTGCTGGAGGTCCCCGTGCCTGTTCGCTTCCTCTTCGTGATGCTGGGGCCCAGCCATA
CCAGCACCGACTATCACGAGCTAGGGCGCTCCATTGCCACGCTCATGTCTGACAAGCTGTTTCA
CGAGGCTGCCTACCAGGCAGATGACCGGCAGGACCTTTTGGGTGCCATCAGCGAGTTTTTGGAC
GGTAGCATTGTGATTCCCCCATCGGAGGTAGAGGGCCGAGACCTACTCCGTTCCGTGGCTGCCT
TCCAGCGAGAGCTGCTGAGGAAGCGACGGGAGCGGGAACAGACCAAAGTGGAGATGACCACCCG
GGGAGGCTATGTGGCCCCTGGCAAAGAACTGTCTTTGGAGATGGGAGGCTCCGAGGCAACCTCT
GAAGATGATCCCCTGCAGCGGACAGGCTCAGTGTTTGGGGGGCTAGTACGGGATGTGAAGCGCC
GGTACCCACACTACCCCAGTGACCTACGGGATGCACTGCACTCTCAGTGTGTGGCTGCCGTGCT
GTTCATTTATTTCGCAGCCCTCAGCCCTGCTATTACCTTTGGGGGTCTGCTAGGAGAGAAGACT
GAGGGGCTGATGGGTGTGTCAGAGCTGATTGTGTCCACGGCTGTGCTTGGGGTTCTCTTCTCTC
TGCTGGGGGCCCAGCCGCTGCTCGTGGTGGGCTTCTCTGGCCCTCTGCTGGTCTTCGAAGAAGC
TTTCTTCAAGTTCTGCCGAGCTCAGGACCTGGAATACCTCACCGGTCGAGTGTGGGTGGGCCTC
TGGCTGGTGGTCTTCGTCCTGGCCCTGGTGGCGGCTGAGGGCAGCTTCCTTGTCCGCTACATCT
CGCCATTTACCCAGGAGATCTTCGCTTTCCTCATCTCACTAATTTTCATCTATGAGACTTTCCA
CAAGCTCTATAAGGTGTTCACAGAGCATCCTTTGCTGCCCTTCTACCCACCGGAGGAGGCCCTG
GAGCCTGGCTTGGAACTGAATAGTAGTGCCCTGCCCCCCACAGAGGGACCACCAGGTCCCCGGA
ACCAGCCCAATACAGCTCTGCTGTCCCTCATCCTCATGCTGGGGACTTTCCTCATTGCCTTCTT
CCTGCGAAAGTTCAGGAACAGCCGCTTCCTGGGGGGCAAGGCTCGGCGCGTCATCGGGGACTTC
GGCATTCCCATCTCCATCCTGGTGATGGTCCTTGTGGATTACTCTATCACAGACACCTACACAC
AGAAGCTGACGGTGCCTACAGGGCTCTCAGTGACTTCCCCGCATAAGCGCACGTGGTTCATCCC
ACCCTTGGGCAGTGCCCGCCCCTTCCCACCATGGATGATGGTGGCTGCTGCTGTCCCTGCACTC
TTGGTCCTCATCCTGATATTCATGGAGACTCAGATCACTGCGCTCATCGTCAGCCAGAAGGCAC
GGAGGCTACTCAAGGGTTCCGGCTTCCATCTTGACCTGCTGTTGATTGGCTCTTTGGGTGGCCT
CTGTGGGCTCTTCGGCTTGCCCTGGCTCACAGCCGCCACTGTCCGCTCTGTCACCCATGTCAAC
GCGTTGACGGTGATGCGTACTGCCATTGCACCTGGTGACAAGCCCCAGATCCAGGAGGTGCGGG
AGCAGCGAGTCACCGGGGTGCTCATTGCCAGCCTCGTGGGTCTGTCTATCGTCATGGGAGCTGT
GCTGCGCAGGATCCCGTTGGCCGTGCTCTTTGGGATTTTCCTGTACATGGGAGTCACATCACTG
TCTGGTATCCAGTTGTCCCAGCGTCTGCTGCTCATTTTCATGCCAGCCAAGCATCACCCCGAGC
AGCCCTACGTGACCAAGGTGAAGACATGGAGGATGCACCTGTTCACCTTCATCCAGCTGGGCTG
CATCGCGCTCCTCTGGGTGGTCAAGTCAACGGTGGCCTCACTGGCCTTTCCCTTCCTGCTCTTG
CTCACGGTGCCTCTGAGGCGTTGCCTTTTGCCCCGGCTCTTCCAGGACAGGGAGCTGCAGGCGC
TGGACTCTGAAGACGCAGAGCCAAACTTTGATGAGGATGGTCAGGATGAGTACAATGAGCTCCA
CATGCCTGTGTGACCCTCAAGATGGTGGCCCTCCGAGACCCCACCTTGGTGACTCACCTCAGGA
CCCAGGGATGTGCCTGGAGTCACTGCCCATGCCAGGACAGTGGCCCCTTGACTTTCACAGCCCA
GACGGCACCGGCTTTGAAGTCATTATAACACACTCCTTGTCTTG

hide sequence

RefSeq Acc Id:

XM_017596280 ⟹ XP_017451769

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	84,484,880 - 84,497,746 (+)	NCBI
mRatBN7.2	9	77,036,243 - 77,053,940 (+)	NCBI
Rnor_6.0	9	82,742,207 - 82,755,119 (+)	NCBI

Sequence:

show sequence

TCTGGCTACAGATGGGTAGATACTGTGCCAAGGTCAAATGTTGGGTGGCACCCAGCGCCAGAAG
CCAGGCCTTTGAAGGGCATCAGCTGAACTGGAGGTGTTGATGGCAAATGCTTTCAGGGGTCTGT
GATCTTGGAAACGGGCCCAAGCTGGAGAGGCTTGTTTGCGCGAAGAGGGTCTCCTCCAGGGCTC
CTGAGGGAAAGGGAGGGGTGGCTAAAAGCAAGGTGGAGGAGTGCGTTTGAGGGATTGTGGGAAT
TTAGGGCCGTGCACCCGCCCCTCCTCCCCCCGCAATGCGTGGGGCGCCTGGAAAGGGGTCTTGC
GGGCAGGTGGGATCCTGCGGGGACCCGAGCGCCGGGCCCATGCTGGCCCAGTCGGGGTAAGTCA
GGAATCGTCCACTCCCATTGTGCGGCCGGGCGGCGGCCGGCTGGCAGAGCCGAGCTCTAGGAGG
TGGAGCCGTGGACTGCGGGCTCCGGCGCCTGCGTCCGACCTGCCCGGCTCTGCGCGGCGAGAGG
CCGGACGGGAACCCGGCAGCCGCGCCCCGGCGCTAGCGGGGAGGGACATGGGGCGCGGCGGTTC
TCCCAAGCCCCGCAGGTTCCGGAGCCCGGAGGATTTGGGTCCCGTAGTGACTGAGAGACTCCTA
AGTCTTCAGCCCAACCATGGCTAATGGGGTGATCCCACCGCCCGGGGGCGCCTCCCCCCTACCC
CAGGTCCGGGTGCCCTTGGAGGAGCCCCCACTGGGTCCAGATGTAGAAGAGGAGGATGATGACT
TGGGCAAGACCTTGGCTGTGAGCAGGTTTGGGGACCTCATCAGCAAGACCCCGGCCTGGGACCC
TGAGAAGCCTAGCCGCAGCTACAGCGAGCGCGACTTTGAGTTTCACCGGCACACATCCCACCAC
ACCCATCACCCGCTCTCAGCCCGCCTGCCTCCACCCCACAAGCTACGGCGACTGCCCCCCACCT
CTGCTCGGCACGCCAGGAGGAAGAGGAAGAAAGAGAAAACCTCTGCTCCCCCCTCAGAAGGGAC
ACCCCCTATCCAGGAGGAGGGGGGAGCTGGAGCAGAAGAGGAGGAGGAGGAAGAGGAGGAAGAA
GAGGGAGAGTCTGAGGCAGAGCCTGTGGAGCCTCCACCCCCAGGGCCACCACAGAAAGCAAAGT
TCTCCATTGGAAGTGATGAGGATGACAGCCCAGGTCTTTCTATCAAGGCTCCCTGTGCCAAGGC
CCTGCCTTCCGTGGGCCTGCCGTCTGACCAGAGTCCCCAGCGCTCCGGCAGCTCCCCCAGTCCC
CGGGCCCGGGCTTCCCGAATCTCTACAGAGAAGAGTCGACCCTGGAGTCCATCAGCCAGCTATG
ACCTGCGGGAGCGATTGTGCCCAGGCAGTGCCCTGGGCAACCCTGGGCCAGAGCAGCGGGTGCC
CACTGATGAGGCGGAGGCTCAAATGCTGGGTTCTGCCGATCTGGACGACATGAAGAGTCATCGG
CTGGAGGACAACCCCGGAGTGCGGCGACACTTGGTGAAGAAACCATCCCGGATACAGGGTGGGA
GAGGCAGCCCCAGTGGCCTGGCGCCCATCTTGCGCAGGAAAAAGAAGAAGAAGAAGCTGGATCG
GAGGCCTCATGAGGTGTTCGTGGAGCTGAATGAACTGATGTTGGACCGGAGCCAGGAGCCACAC
TGGCGGGAGACAGCACGCTGGATCAAGTTCGAAGAGGATGTGGAGGAGGAGACAGAGCGCTGGG
GGAAGCCTCATGTTGCTTCGCTCTCCTTCCGTAGCCTCCTGGAGCTTAGGAGGACCATTGCCCA
GGGAGCGGCTCTCCTGGACCTGGAGCAGACCACCCTGCCGGGCATCGCTCACCTTGTGGTGGAG
ACCATGATTGTATCTGACCAGATCCGGCCCGAGGACAGGGCTAGCGTTCTGAGAACTCTGCTCC
TGAAACACAGCCATCCCAACGATGACAAGGACAGTGGCTTTTTCCCTCGAAATCCGTCAAGCTC
CAGTGTGAACTCAGTCTTGGGGAATCACCACCCAACTCCTAGTCATGGCCCTGATGGTGCAGTA
CCCACCATGGCTGATGACCTAGGGGAGCCAGCCCCATTGTGGCCACATGACCCTGATGCAAAGG
AGAAGCCCCTCCACATGCCTGGGGGAGACGGTCACCGGGGGAAAAGCCTGAAACTGCTGGAGAA
GATCCCTGAGGACGCTGAGGCCACTGTCGTGCTTGTGGGCAGCGTGCCTTTCTTGGAGCAGCCA
GCAGCAGCTTTTGTGAGGCTCAGCGAGGCTGTTCTCTTGGAGTCTGTGCTGGAGGTCCCCGTGC
CTGTTCGCTTCCTCTTCGTGATGCTGGGGCCCAGCCATACCAGCACCGACTATCACGAGCTAGG
GCGCTCCATTGCCACGCTCATGTCTGACAAGCTGTTTCACGAGGCTGCCTACCAGGCAGATGAC
CGGCAGGACCTTTTGGGTGCCATCAGCGAGTTTTTGGACGGTAGCATTGTGATTCCCCCATCGG
AGGTAGAGGGCCGAGACCTACTCCGTTCCGTGGCTGCCTTCCAGCGAGAGCTGCTGAGGAAGCG
ACGGGAGCGGGAACAGACCAAAGTGGAGATGACCACCCGGGGAGGCTATGTGGCCCCTGGCAAA
GAACTGTCTTTGGAGATGGGAGGCTCCGAGGCAACCTCTGAAGATGATCCCCTGCAGCGGACAG
GCTCAGTGTTTGGGGGGCTAGTACGGGATGTGAAGCGCCGGTACCCACACTACCCCAGTGACCT
ACGGGATGCACTGCACTCTCAGTGTGTGGCTGCCGTGCTGTTCATTTATTTCGCAGCCCTCAGC
CCTGCTATTACCTTTGGGGGTCTGCTAGGAGAGAAGACTGAGGGGCTGATGGGTGTGTCAGAGC
TGATTGTGTCCACGGCTGTGCTTGGGGTTCTCTTCTCTCTGCTGGGGGCCCAGCCGCTGCTCGT
GGTGGGCTTCTCTGGCCCTCTGCTGGTCTTCGAAGAAGCTTTCTTCAAGTTCTGCCGAGCTCAG
GACCTGGAATACCTCACCGGTCGAGTGTGGGTGGGCCTCTGGCTGGTGGTCTTCGTCCTGGCCC
TGGTGGCGGCTGAGGGCAGCTTCCTTGTCCGCTACATCTCGCCATTTACCCAGGAGATCTTCGC
TTTCCTCATCTCACTAATTTTCATCTATGAGACTTTCCACAAGCTCTATAAGGTGTTCACAGAG
CATCCTTTGCTGCCCTTCTACCCACCGGAGGAGGCCCTGGAGCCTGGCTTGGAACTGAATAGTA
GTGCCCTGCCCCCCACAGAGGGACCACCAGGTCCCCGGAACCAGCCCAATACAGCTCTGCTGTC
CCTCATCCTCATGCTGGGGACTTTCCTCATTGCCTTCTTCCTGCGAAAGTTCAGGAACAGCCGC
TTCCTGGGGGGCAAGGCTCGGCGCGTCATCGGGGACTTCGGCATTCCCATCTCCATCCTGGTGA
TGGTCCTTGTGGATTACTCTATCACAGACACCTACACACAGAAGCTGACGGTGCCTACAGGGCT
CTCAGTGACTTCCCCGCATAAGCGCACGTGGTTCATCCCACCCTTGGGCAGTGCCCGCCCCTTC
CCACCATGGATGATGGTGGCTGCTGCTGTCCCTGCACTCTTGGTCCTCATCCTGATATTCATGG
AGACTCAGATCACTGCGCTCATCGTCAGCCAGAAGGCACGGAGGCTACTCAAGGGTTCCGGCTT
CCATCTTGACCTGCTGTTGATTGGCTCTTTGGGTGGCCTCTGTGGGCTCTTCGGCTTGCCCTGG
CTCACAGCCGCCACTGTCCGCTCTGTCACCCATGTCAACGCGTTGACGGTGATGCGTACTGCCA
TTGCACCTGGTGACAAGCCCCAGATCCAGGAGGTGCGGGAGCAGCGAGTCACCGGGGTGCTCAT
TGCCAGCCTCGTGGGTCTGTCTATCGTCATGGGAGCTGTGCTGCGCAGGATCCCGTTGGCCGTG
CTCTTTGGGATTTTCCTGTACATGGGAGTCACATCACTGTCTGGTATCCAGTTGTCCCAGCGTC
TGCTGCTCATTTTCATGCCAGCCAAGCATCACCCCGAGCAGCCCTACGTGACCAAGGTGAAGAC
ATGGAGGATGCACCTGTTCACCTTCATCCAGCTGGGCTGCATCGCGCTCCTCTGGGTGGTCAAG
TCAACGGTGGCCTCACTGGCCTTTCCCTTCCTGCTCTTGCTCACGGTGCCTCTGAGGCGTTGCC
TTTTGCCCCGGCTCTTCCAGGACAGGGAGCTGCAGGCGCTGGACTCTGAAGACGCAGAGCCAAA
CTTTGATGAGGATGGTCAGGATGAGTACAATGAGCTCCACATGCCTGTGTGACCCTCAAGATGG
TGGCCCTCCGAGACCCCACCTTGGTGACTCACCTCAGGACCCAGGGATGTGCCTGGAGTCACTG
CCCATGCCAGGACAGTGGCCCCTTGACTTTCACAGCCCAGACGGCACCGGCTTTGAAGTCATTA
TAACACACTCCTTGTCTTG

hide sequence

RefSeq Acc Id:

XM_039083028 ⟹ XP_038938956

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	84,486,051 - 84,497,746 (+)	NCBI
mRatBN7.2	9	77,037,415 - 77,053,940 (+)	NCBI

RefSeq Acc Id:

XM_039083030 ⟹ XP_038938958

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	84,490,425 - 84,497,746 (+)	NCBI
mRatBN7.2	9	77,041,785 - 77,053,940 (+)	NCBI

RefSeq Acc Id:

XM_063266648 ⟹ XP_063122718

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	84,485,458 - 84,497,746 (+)	NCBI

RefSeq Acc Id:

XM_063266649 ⟹ XP_063122719

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	84,486,051 - 84,497,746 (+)	NCBI

RefSeq Acc Id:

XM_063266650 ⟹ XP_063122720

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	84,486,084 - 84,497,746 (+)	NCBI

RefSeq Acc Id:

XM_063266651 ⟹ XP_063122721

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	84,490,406 - 84,497,746 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_058745	(Get FASTA)	NCBI Sequence Viewer
	XP_006245211	(Get FASTA)	NCBI Sequence Viewer
	XP_017451765	(Get FASTA)	NCBI Sequence Viewer
	XP_017451766	(Get FASTA)	NCBI Sequence Viewer
	XP_017451768	(Get FASTA)	NCBI Sequence Viewer
	XP_017451769	(Get FASTA)	NCBI Sequence Viewer
	XP_038938956	(Get FASTA)	NCBI Sequence Viewer
	XP_038938958	(Get FASTA)	NCBI Sequence Viewer
	XP_063122718	(Get FASTA)	NCBI Sequence Viewer
	XP_063122719	(Get FASTA)	NCBI Sequence Viewer
	XP_063122720	(Get FASTA)	NCBI Sequence Viewer
	XP_063122721	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA40798	(Get FASTA)	NCBI Sequence Viewer
	EDL75455	(Get FASTA)	NCBI Sequence Viewer
	EDL75456	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000027337
	ENSRNOP00000027337.1
GenBank Protein	P23348	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_058745 ⟸ NM_017049

- UniProtKB:

P23348 (UniProtKB/Swiss-Prot), G3V8P8 (UniProtKB/TrEMBL), A6JW47 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MANGVIPPPGGPSPLPQVRVPLEEPPLGPDVEEEDDDLGKTLAVSRFGDLISKTPAWDPEKPSR
SYSERDFEFHRHTSHHTHHPLSARLPPPHKLRRLPPTSARHARRKRKKEKTSAPPSEGTPPIQE
EGGAGAEEEEEEEEEEEGESEAEPVEPPPPGPPQKAKFSIGSDEDDSPGLSIKAPCAKALPSVG
LPSDQSPQRSGSSPSPRARASRISTEKSRPWSPSASYDLRERLCPGSALGNPGPEQRVPTDEAE
AQMLGSADLDDMKSHRLEDNPGVRRHLVKKPSRIQGGRGSPSGLAPILRRKKKKKKLDRRPHEV
FVELNELMLDRSQEPHWRETARWIKFEEDVEEETERWGKPHVASLSFRSLLELRRTIAQGAALL
DLEQTTLPGIAHLVVETMIVSDQIRPEDRASVLRTLLLKHSHPNDDKDSGFFPRNPSSSSVNSV
LGNHHPTPSHGPDGAVPTMADDLGEPAPLWPHDPDAKEKPLHMPGGDGHRGKSLKLLEKIPEDA
EATVVLVGSVPFLEQPAAAFVRLSEAVLLESVLEVPVPVRFLFVMLGPSHTSTDYHELGRSIAT
LMSDKLFHEAAYQADDRQDLLGAISEFLDGSIVIPPSEVEGRDLLRSVAAFQRELLRKRREREQ
TKVEMTTRGGYVAPGKELSLEMGGSEATSEDDPLQRTGSVFGGLVRDVKRRYPHYPSDLRDALH
SQCVAAVLFIYFAALSPAITFGGLLGEKTEGLMGVSELIVSTAVLGVLFSLLGAQPLLVVGFSG
PLLVFEEAFFKFCRAQDLEYLTGRVWVGLWLVVFVLALVAAEGSFLVRYISPFTQEIFAFLISL
IFIYETFHKLYKVFTEHPLLPFYPPEEALEPGLELNSSALPPTEGPPGPRNQPNTALLSLILML
GTFLIAFFLRKFRNSRFLGGKARRVIGDFGIPISILVMVLVDYSITDTYTQKLTVPTGLSVTSP
HKRTWFIPPLGSARPFPPWMMVAAAVPALLVLILIFMETQITALIVSQKARRLLKGSGFHLDLL
LIGSLGGLCGLFGLPWLTAATVRSVTHVNALTVMRTAIAPGDKPQIQEVREQRVTGVLIASLVG
LSIVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIFMPAKHHPEQPYVTKVKTWRMHL
FTFIQLGCIALLWVVKSTVASLAFPFLLLLTVPLRRCLLPRLFQDRELQALDSEDAEPNFDEDG
QDEYNELHMPV

hide sequence

RefSeq Acc Id:

XP_006245211 ⟸ XM_006245149

- Peptide Label:

isoform X3

- Sequence:

show sequence

MTSPLDKVMEPNGALGPKPGDTEDRGPGRNPAPGTGDLVASEDLEMFVLDFEDYGLWEPMRGHP
SPLAGVAACHRLEDNPGVRRHLVKKPSRIQGGRGSPSGLAPILRRKKKKKKLDRRPHEVFVELN
ELMLDRSQEPHWRETARWIKFEEDVEEETERWGKPHVASLSFRSLLELRRTIAQGAALLDLEQT
TLPGIAHLVVETMIVSDQIRPEDRASVLRTLLLKHSHPNDDKDSGFFPRNPSSSSVNSVLGNHH
PTPSHGPDGAVPTMADDLGEPAPLWPHDPDAKEKPLHMPGGDGHRGKSLKLLEKIPEDAEATVV
LVGSVPFLEQPAAAFVRLSEAVLLESVLEVPVPVRFLFVMLGPSHTSTDYHELGRSIATLMSDK
LFHEAAYQADDRQDLLGAISEFLDGSIVIPPSEVEGRDLLRSVAAFQRELLRKRREREQTKVEM
TTRGGYVAPGKELSLEMGGSEATSEDDPLQRTGSVFGGLVRDVKRRYPHYPSDLRDALHSQCVA
AVLFIYFAALSPAITFGGLLGEKTEGLMGVSELIVSTAVLGVLFSLLGAQPLLVVGFSGPLLVF
EEAFFKFCRAQDLEYLTGRVWVGLWLVVFVLALVAAEGSFLVRYISPFTQEIFAFLISLIFIYE
TFHKLYKVFTEHPLLPFYPPEEALEPGLELNSSALPPTEGPPGPRNQPNTALLSLILMLGTFLI
AFFLRKFRNSRFLGGKARRVIGDFGIPISILVMVLVDYSITDTYTQKLTVPTGLSVTSPHKRTW
FIPPLGSARPFPPWMMVAAAVPALLVLILIFMETQITALIVSQKARRLLKGSGFHLDLLLIGSL
GGLCGLFGLPWLTAATVRSVTHVNALTVMRTAIAPGDKPQIQEVREQRVTGVLIASLVGLSIVM
GAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIFMPAKHHPEQPYVTKVKTWRMHLFTFIQ
LGCIALLWVVKSTVASLAFPFLLLLTVPLRRCLLPRLFQDRELQALDSEDAEPNFDEDGQDEYN
ELHMPV

hide sequence

RefSeq Acc Id:	XP_017451769 ⟸ XM_017596280
- Peptide Label:	isoform X1
- UniProtKB:	P23348 (UniProtKB/Swiss-Prot), G3V8P8 (UniProtKB/TrEMBL), A6JW47 (UniProtKB/TrEMBL)
- Sequence:	show sequence MANGVIPPPGGASPLPQVRVPLEEPPLGPDVEEEDDDLGKTLAVSRFGDLISKTPAWDPEKPSR SYSERDFEFHRHTSHHTHHPLSARLPPPHKLRRLPPTSARHARRKRKKEKTSAPPSEGTPPIQE EGGAGAEEEEEEEEEEEGESEAEPVEPPPPGPPQKAKFSIGSDEDDSPGLSIKAPCAKALPSVG LPSDQSPQRSGSSPSPRARASRISTEKSRPWSPSASYDLRERLCPGSALGNPGPEQRVPTDEAE AQMLGSADLDDMKSHRLEDNPGVRRHLVKKPSRIQGGRGSPSGLAPILRRKKKKKKLDRRPHEV FVELNELMLDRSQEPHWRETARWIKFEEDVEEETERWGKPHVASLSFRSLLELRRTIAQGAALL DLEQTTLPGIAHLVVETMIVSDQIRPEDRASVLRTLLLKHSHPNDDKDSGFFPRNPSSSSVNSV LGNHHPTPSHGPDGAVPTMADDLGEPAPLWPHDPDAKEKPLHMPGGDGHRGKSLKLLEKIPEDA EATVVLVGSVPFLEQPAAAFVRLSEAVLLESVLEVPVPVRFLFVMLGPSHTSTDYHELGRSIAT LMSDKLFHEAAYQADDRQDLLGAISEFLDGSIVIPPSEVEGRDLLRSVAAFQRELLRKRREREQ TKVEMTTRGGYVAPGKELSLEMGGSEATSEDDPLQRTGSVFGGLVRDVKRRYPHYPSDLRDALH SQCVAAVLFIYFAALSPAITFGGLLGEKTEGLMGVSELIVSTAVLGVLFSLLGAQPLLVVGFSG PLLVFEEAFFKFCRAQDLEYLTGRVWVGLWLVVFVLALVAAEGSFLVRYISPFTQEIFAFLISL IFIYETFHKLYKVFTEHPLLPFYPPEEALEPGLELNSSALPPTEGPPGPRNQPNTALLSLILML GTFLIAFFLRKFRNSRFLGGKARRVIGDFGIPISILVMVLVDYSITDTYTQKLTVPTGLSVTSP HKRTWFIPPLGSARPFPPWMMVAAAVPALLVLILIFMETQITALIVSQKARRLLKGSGFHLDLL LIGSLGGLCGLFGLPWLTAATVRSVTHVNALTVMRTAIAPGDKPQIQEVREQRVTGVLIASLVG LSIVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIFMPAKHHPEQPYVTKVKTWRMHL FTFIQLGCIALLWVVKSTVASLAFPFLLLLTVPLRRCLLPRLFQDRELQALDSEDAEPNFDEDG QDEYNELHMPV hide sequence

RefSeq Acc Id:	XP_017451766 ⟸ XM_017596277
- Peptide Label:	isoform X1
- UniProtKB:	P23348 (UniProtKB/Swiss-Prot), G3V8P8 (UniProtKB/TrEMBL), A6JW47 (UniProtKB/TrEMBL)
- Sequence:	show sequence MANGVIPPPGGASPLPQVRVPLEEPPLGPDVEEEDDDLGKTLAVSRFGDLISKTPAWDPEKPSR SYSERDFEFHRHTSHHTHHPLSARLPPPHKLRRLPPTSARHARRKRKKEKTSAPPSEGTPPIQE EGGAGAEEEEEEEEEEEGESEAEPVEPPPPGPPQKAKFSIGSDEDDSPGLSIKAPCAKALPSVG LPSDQSPQRSGSSPSPRARASRISTEKSRPWSPSASYDLRERLCPGSALGNPGPEQRVPTDEAE AQMLGSADLDDMKSHRLEDNPGVRRHLVKKPSRIQGGRGSPSGLAPILRRKKKKKKLDRRPHEV FVELNELMLDRSQEPHWRETARWIKFEEDVEEETERWGKPHVASLSFRSLLELRRTIAQGAALL DLEQTTLPGIAHLVVETMIVSDQIRPEDRASVLRTLLLKHSHPNDDKDSGFFPRNPSSSSVNSV LGNHHPTPSHGPDGAVPTMADDLGEPAPLWPHDPDAKEKPLHMPGGDGHRGKSLKLLEKIPEDA EATVVLVGSVPFLEQPAAAFVRLSEAVLLESVLEVPVPVRFLFVMLGPSHTSTDYHELGRSIAT LMSDKLFHEAAYQADDRQDLLGAISEFLDGSIVIPPSEVEGRDLLRSVAAFQRELLRKRREREQ TKVEMTTRGGYVAPGKELSLEMGGSEATSEDDPLQRTGSVFGGLVRDVKRRYPHYPSDLRDALH SQCVAAVLFIYFAALSPAITFGGLLGEKTEGLMGVSELIVSTAVLGVLFSLLGAQPLLVVGFSG PLLVFEEAFFKFCRAQDLEYLTGRVWVGLWLVVFVLALVAAEGSFLVRYISPFTQEIFAFLISL IFIYETFHKLYKVFTEHPLLPFYPPEEALEPGLELNSSALPPTEGPPGPRNQPNTALLSLILML GTFLIAFFLRKFRNSRFLGGKARRVIGDFGIPISILVMVLVDYSITDTYTQKLTVPTGLSVTSP HKRTWFIPPLGSARPFPPWMMVAAAVPALLVLILIFMETQITALIVSQKARRLLKGSGFHLDLL LIGSLGGLCGLFGLPWLTAATVRSVTHVNALTVMRTAIAPGDKPQIQEVREQRVTGVLIASLVG LSIVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIFMPAKHHPEQPYVTKVKTWRMHL FTFIQLGCIALLWVVKSTVASLAFPFLLLLTVPLRRCLLPRLFQDRELQALDSEDAEPNFDEDG QDEYNELHMPV hide sequence

RefSeq Acc Id:	XP_017451768 ⟸ XM_017596279
- Peptide Label:	isoform X1
- UniProtKB:	P23348 (UniProtKB/Swiss-Prot), G3V8P8 (UniProtKB/TrEMBL), A6JW47 (UniProtKB/TrEMBL)
- Sequence:	show sequence MANGVIPPPGGASPLPQVRVPLEEPPLGPDVEEEDDDLGKTLAVSRFGDLISKTPAWDPEKPSR SYSERDFEFHRHTSHHTHHPLSARLPPPHKLRRLPPTSARHARRKRKKEKTSAPPSEGTPPIQE EGGAGAEEEEEEEEEEEGESEAEPVEPPPPGPPQKAKFSIGSDEDDSPGLSIKAPCAKALPSVG LPSDQSPQRSGSSPSPRARASRISTEKSRPWSPSASYDLRERLCPGSALGNPGPEQRVPTDEAE AQMLGSADLDDMKSHRLEDNPGVRRHLVKKPSRIQGGRGSPSGLAPILRRKKKKKKLDRRPHEV FVELNELMLDRSQEPHWRETARWIKFEEDVEEETERWGKPHVASLSFRSLLELRRTIAQGAALL DLEQTTLPGIAHLVVETMIVSDQIRPEDRASVLRTLLLKHSHPNDDKDSGFFPRNPSSSSVNSV LGNHHPTPSHGPDGAVPTMADDLGEPAPLWPHDPDAKEKPLHMPGGDGHRGKSLKLLEKIPEDA EATVVLVGSVPFLEQPAAAFVRLSEAVLLESVLEVPVPVRFLFVMLGPSHTSTDYHELGRSIAT LMSDKLFHEAAYQADDRQDLLGAISEFLDGSIVIPPSEVEGRDLLRSVAAFQRELLRKRREREQ TKVEMTTRGGYVAPGKELSLEMGGSEATSEDDPLQRTGSVFGGLVRDVKRRYPHYPSDLRDALH SQCVAAVLFIYFAALSPAITFGGLLGEKTEGLMGVSELIVSTAVLGVLFSLLGAQPLLVVGFSG PLLVFEEAFFKFCRAQDLEYLTGRVWVGLWLVVFVLALVAAEGSFLVRYISPFTQEIFAFLISL IFIYETFHKLYKVFTEHPLLPFYPPEEALEPGLELNSSALPPTEGPPGPRNQPNTALLSLILML GTFLIAFFLRKFRNSRFLGGKARRVIGDFGIPISILVMVLVDYSITDTYTQKLTVPTGLSVTSP HKRTWFIPPLGSARPFPPWMMVAAAVPALLVLILIFMETQITALIVSQKARRLLKGSGFHLDLL LIGSLGGLCGLFGLPWLTAATVRSVTHVNALTVMRTAIAPGDKPQIQEVREQRVTGVLIASLVG LSIVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIFMPAKHHPEQPYVTKVKTWRMHL FTFIQLGCIALLWVVKSTVASLAFPFLLLLTVPLRRCLLPRLFQDRELQALDSEDAEPNFDEDG QDEYNELHMPV hide sequence

RefSeq Acc Id:	XP_017451765 ⟸ XM_017596276
- Peptide Label:	isoform X1
- UniProtKB:	P23348 (UniProtKB/Swiss-Prot), G3V8P8 (UniProtKB/TrEMBL), A6JW47 (UniProtKB/TrEMBL)
- Sequence:	show sequence MANGVIPPPGGASPLPQVRVPLEEPPLGPDVEEEDDDLGKTLAVSRFGDLISKTPAWDPEKPSR SYSERDFEFHRHTSHHTHHPLSARLPPPHKLRRLPPTSARHARRKRKKEKTSAPPSEGTPPIQE EGGAGAEEEEEEEEEEEGESEAEPVEPPPPGPPQKAKFSIGSDEDDSPGLSIKAPCAKALPSVG LPSDQSPQRSGSSPSPRARASRISTEKSRPWSPSASYDLRERLCPGSALGNPGPEQRVPTDEAE AQMLGSADLDDMKSHRLEDNPGVRRHLVKKPSRIQGGRGSPSGLAPILRRKKKKKKLDRRPHEV FVELNELMLDRSQEPHWRETARWIKFEEDVEEETERWGKPHVASLSFRSLLELRRTIAQGAALL DLEQTTLPGIAHLVVETMIVSDQIRPEDRASVLRTLLLKHSHPNDDKDSGFFPRNPSSSSVNSV LGNHHPTPSHGPDGAVPTMADDLGEPAPLWPHDPDAKEKPLHMPGGDGHRGKSLKLLEKIPEDA EATVVLVGSVPFLEQPAAAFVRLSEAVLLESVLEVPVPVRFLFVMLGPSHTSTDYHELGRSIAT LMSDKLFHEAAYQADDRQDLLGAISEFLDGSIVIPPSEVEGRDLLRSVAAFQRELLRKRREREQ TKVEMTTRGGYVAPGKELSLEMGGSEATSEDDPLQRTGSVFGGLVRDVKRRYPHYPSDLRDALH SQCVAAVLFIYFAALSPAITFGGLLGEKTEGLMGVSELIVSTAVLGVLFSLLGAQPLLVVGFSG PLLVFEEAFFKFCRAQDLEYLTGRVWVGLWLVVFVLALVAAEGSFLVRYISPFTQEIFAFLISL IFIYETFHKLYKVFTEHPLLPFYPPEEALEPGLELNSSALPPTEGPPGPRNQPNTALLSLILML GTFLIAFFLRKFRNSRFLGGKARRVIGDFGIPISILVMVLVDYSITDTYTQKLTVPTGLSVTSP HKRTWFIPPLGSARPFPPWMMVAAAVPALLVLILIFMETQITALIVSQKARRLLKGSGFHLDLL LIGSLGGLCGLFGLPWLTAATVRSVTHVNALTVMRTAIAPGDKPQIQEVREQRVTGVLIASLVG LSIVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIFMPAKHHPEQPYVTKVKTWRMHL FTFIQLGCIALLWVVKSTVASLAFPFLLLLTVPLRRCLLPRLFQDRELQALDSEDAEPNFDEDG QDEYNELHMPV hide sequence

RefSeq Acc Id:

ENSRNOP00000027337 ⟸ ENSRNOT00000027337

RefSeq Acc Id:	XP_038938956 ⟸ XM_039083028
- Peptide Label:	isoform X2
- UniProtKB:	P23348 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038938958 ⟸ XM_039083030
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063122718 ⟸ XM_063266648
- Peptide Label:	isoform X1
- UniProtKB:	A6JW47 (UniProtKB/TrEMBL), G3V8P8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063122719 ⟸ XM_063266649
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063122720 ⟸ XM_063266650
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063122721 ⟸ XM_063266651
- Peptide Label:	isoform X5

Protein Domains

Band 3 cytoplasmic Bicarbonate transporter-like transmembrane

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P23348-F1-model_v2	AlphaFold	P23348	1-1227	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:3712	AgrOrtholog
BioCyc Gene	G2FUF-27057	BioCyc
Ensembl Genes	ENSRNOG00000020138	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000027337	ENTREZGENE
	ENSRNOT00000027337.4	UniProtKB/TrEMBL
Gene3D-CATH	Helical hairpin bin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Anion_exchange	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Anion_exchange_3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Anion_exchange_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Band3_cytoplasmic_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HCO3_transpt_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HCO3_transpt_euk	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTrfase/Anion_transptr	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:24781	UniProtKB/Swiss-Prot
NCBI Gene	24781	ENTREZGENE
PANTHER	PTHR11453	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR11453:SF15	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Band_3_cyto	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HCO3_cotransp	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Slc4a3	PhenoGen
PRINTS	ANIONEXCHNGR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ANIONEXHNGR3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HCO3TRNSPORT	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	ANION_EXCHANGER_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ANION_EXCHANGER_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000020138	RatGTEx
Superfamily-SCOP	SSF55804	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A6JW47	ENTREZGENE, UniProtKB/TrEMBL
	B3A3_RAT	UniProtKB/Swiss-Prot
	G3V8P8	ENTREZGENE, UniProtKB/TrEMBL
	P23348	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-24	Slc4a3	solute carrier family 4 member 3	Slc4a3	solute carrier family 4 (anion exchanger), member 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-15	Slc4a3	solute carrier family 4 (anion exchanger), member 3	Slc4a3	solute carrier family 4, member 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2003-04-09	Slc4a3	solute carrier family 4, member 3		Solute carrier family 4, member 3, anion exchange protein 3	Name updated	629478	APPROVED
2002-06-10	Slc4a3	Solute carrier family 4, member 3, anion exchange protein 3			Symbol and Name status set to approved	70586	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_expression	mRNA expressed mostly in the heart and forestomach	729955
gene_mapping	segregates on chr 4 with blood pressure in recombinant inbred rats derived by crossing SHR and BN	1342444
gene_protein	predicted protein consists of 1227 aa residues and masses 135.4 kDa	729955

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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