Symbol:
Rab22a
Name:
RAB22A, member RAS oncogene family
RGD ID:
1311959
Description:
Predicted to enable GDP binding activity; GTP binding activity; and GTPase activity. Predicted to be involved in several processes, including endosome organization; intracellular protein transport; and regulation of vesicle size. Predicted to be located in several cellular components, including Golgi apparatus; actin cytoskeleton; and phagocytic vesicle. Predicted to be active in early endosome. Orthologous to human RAB22A (RAB22A, member RAS oncogene family); PARTICIPATES IN endocytosis pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 4,4'-sulfonyldiphenol.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
LOC366265; ras-related protein Rab-22A
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
RAB22A (RAB22A, member RAS oncogene family) HGNC
Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):
Rab22a (RAB22A, member RAS oncogene family) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Rab22a (RAB22A, member RAS oncogene family) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
RAB22A (RAB22A, member RAS oncogene family) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
RAB22A (RAB22A, member RAS oncogene family) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Rab22a (RAB22A, member RAS oncogene family) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
RAB22A (RAB22A, member RAS oncogene family) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
RAB22A (RAB22A, member RAS oncogene family) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Rab22a (RAB22A, member RAS oncogene family) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
RAB31 (RAB31, member RAS oncogene family) HGNC
OrthoDB
Homo sapiens (human):
SPRY4 (sprouty RTK signaling antagonist 4) HGNC
OMA
Alliance orthologs 3
Homo sapiens (human):
RAB22A (RAB22A, member RAS oncogene family)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Rab22a (RAB22A, member RAS oncogene family)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
rab22a (RAB22A, member RAS oncogene family)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 3 182,877,746 - 182,924,400 (+) NCBI GRCr8 mRatBN7.2 3 162,459,727 - 162,506,129 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 3 162,459,726 - 162,506,137 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 3 166,258,779 - 166,305,183 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 3 174,763,858 - 174,810,369 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 3 172,499,581 - 172,545,983 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 3 171,743,884 - 171,790,558 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 171,743,929 - 171,790,558 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 3 177,802,611 - 177,849,268 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 3 164,556,619 - 164,603,742 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 3 164,462,654 - 164,500,898 (+) NCBI Celera 3 161,643,762 - 161,690,130 (+) NCBI Celera Cytogenetic Map 3 q42 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Rab22a Rat 1,2-dimethylhydrazine multiple interactions ISO Rab22a (Mus musculus) 6480464 [1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in increased expression of RAB22A mRNA CTD PMID:22206623 Rab22a Rat 1,2-dimethylhydrazine increases expression ISO Rab22a (Mus musculus) 6480464 1 and 2-Dimethylhydrazine results in increased expression of RAB22A mRNA CTD PMID:22206623 Rab22a Rat 17alpha-ethynylestradiol multiple interactions ISO Rab22a (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of RAB22A mRNA CTD PMID:17942748 Rab22a Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO Rab22a (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with AHR gene mutant form] results in decreased expression of RAB22A mRNA and [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of RAB22A mRNA CTD PMID:17942748 and PMID:19465110 Rab22a Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of RAB22A mRNA CTD PMID:34747641 Rab22a Rat 2,4-dinitrotoluene affects expression EXP 6480464 2 and 4-dinitrotoluene affects the expression of RAB22A mRNA CTD PMID:21346803 Rab22a Rat 2-hydroxypropanoic acid decreases expression ISO RAB22A (Homo sapiens) 6480464 Lactic Acid results in decreased expression of RAB22A mRNA CTD PMID:30851411 Rab22a Rat 4,4'-sulfonyldiphenol multiple interactions EXP 6480464 [bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of RAB22A mRNA CTD PMID:36041667 Rab22a Rat aflatoxin B1 increases methylation ISO RAB22A (Homo sapiens) 6480464 Aflatoxin B1 results in increased methylation of RAB22A intron CTD PMID:30157460 Rab22a Rat aristolochic acid A increases expression ISO RAB22A (Homo sapiens) 6480464 aristolochic acid I results in increased expression of RAB22A mRNA CTD PMID:33212167 Rab22a Rat atrazine decreases expression ISO RAB22A (Homo sapiens) 6480464 Atrazine results in decreased expression of RAB22A mRNA CTD PMID:22378314 Rab22a Rat benzene increases expression ISO RAB22A (Homo sapiens) 6480464 Benzene results in increased expression of RAB22A mRNA CTD PMID:19162166 Rab22a Rat benzene-1,2,4-triol increases expression ISO RAB22A (Homo sapiens) 6480464 hydroxyhydroquinone results in increased expression of RAB22A mRNA CTD PMID:17572062 Rab22a Rat benzo[a]pyrene decreases expression ISO Rab22a (Mus musculus) 6480464 Benzo(a)pyrene results in decreased expression of RAB22A mRNA CTD PMID:19770486 Rab22a Rat benzo[a]pyrene affects methylation ISO RAB22A (Homo sapiens) 6480464 Benzo(a)pyrene affects the methylation of RAB22A promoter CTD PMID:27901495 Rab22a Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of RAB22A mRNA CTD PMID:30816183 more ... Rab22a Rat bisphenol A multiple interactions EXP 6480464 [bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of RAB22A mRNA CTD PMID:36041667 Rab22a Rat bisphenol F multiple interactions EXP 6480464 [bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of RAB22A mRNA CTD PMID:36041667 Rab22a Rat butanal decreases expression ISO RAB22A (Homo sapiens) 6480464 butyraldehyde results in decreased expression of RAB22A mRNA CTD PMID:26079696 Rab22a Rat cadmium dichloride increases expression ISO RAB22A (Homo sapiens) 6480464 Cadmium Chloride results in increased expression of RAB22A mRNA and Cadmium Chloride results in increased expression of RAB22A protein CTD PMID:24527689 and PMID:27510461 Rab22a Rat carbamazepine affects expression ISO RAB22A (Homo sapiens) 6480464 Carbamazepine affects the expression of RAB22A mRNA CTD PMID:25979313 Rab22a Rat CGP 52608 multiple interactions ISO RAB22A (Homo sapiens) 6480464 CGP 52608 promotes the reaction [RORA protein binds to RAB22A gene] CTD PMID:28238834 Rab22a Rat chlorpyrifos increases expression ISO Rab22a (Mus musculus) 6480464 Chlorpyrifos results in increased expression of RAB22A mRNA CTD PMID:37019170 Rab22a Rat cobalt dichloride increases expression ISO RAB22A (Homo sapiens) 6480464 cobaltous chloride results in increased expression of RAB22A mRNA CTD PMID:19376846 Rab22a Rat copper(II) sulfate increases expression ISO RAB22A (Homo sapiens) 6480464 Copper Sulfate results in increased expression of RAB22A mRNA CTD PMID:19549813 Rab22a Rat crotonaldehyde decreases expression ISO RAB22A (Homo sapiens) 6480464 2-butenal results in decreased expression of RAB22A mRNA CTD PMID:20471460 Rab22a Rat cyclosporin A increases expression ISO RAB22A (Homo sapiens) 6480464 Cyclosporine results in increased expression of RAB22A mRNA CTD PMID:20106945 and PMID:25562108 Rab22a Rat Dibutyl phosphate affects expression ISO RAB22A (Homo sapiens) 6480464 di-n-butylphosphoric acid affects the expression of RAB22A mRNA CTD PMID:37042841 Rab22a Rat doxorubicin decreases expression ISO RAB22A (Homo sapiens) 6480464 Doxorubicin results in decreased expression of RAB22A mRNA CTD PMID:29803840 Rab22a Rat folic acid multiple interactions ISO Rab22a (Mus musculus) 6480464 [1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in increased expression of RAB22A mRNA CTD PMID:22206623 Rab22a Rat formaldehyde increases expression ISO RAB22A (Homo sapiens) 6480464 Formaldehyde results in increased expression of RAB22A mRNA CTD PMID:23649840 Rab22a Rat FR900359 decreases phosphorylation ISO RAB22A (Homo sapiens) 6480464 FR900359 results in decreased phosphorylation of RAB22A protein CTD PMID:37730182 Rab22a Rat gentamycin increases expression EXP 6480464 Gentamicins results in increased expression of RAB22A mRNA CTD PMID:33387578 Rab22a Rat hypochlorous acid decreases expression ISO Rab22a (Mus musculus) 6480464 Hypochlorous Acid results in decreased expression of RAB22A mRNA CTD PMID:19376150 Rab22a Rat methidathion decreases expression ISO Rab22a (Mus musculus) 6480464 methidathion results in decreased expression of RAB22A mRNA CTD PMID:34813904 Rab22a Rat methylmercury chloride decreases expression ISO RAB22A (Homo sapiens) 6480464 methylmercuric chloride results in decreased expression of RAB22A mRNA CTD PMID:28001369 Rab22a Rat nickel atom increases expression ISO RAB22A (Homo sapiens) 6480464 Nickel results in increased expression of RAB22A mRNA CTD PMID:25583101 Rab22a Rat nitrates multiple interactions ISO Rab22a (Mus musculus) 6480464 [Particulate Matter results in increased abundance of Nitrates] which results in increased expression of RAB22A mRNA CTD PMID:35964746 Rab22a Rat ozone multiple interactions ISO RAB22A (Homo sapiens) 6480464 [Air Pollutants results in increased abundance of Ozone] which affects the expression of RAB22A mRNA CTD PMID:35430440 Rab22a Rat rac-lactic acid decreases expression ISO RAB22A (Homo sapiens) 6480464 Lactic Acid results in decreased expression of RAB22A mRNA CTD PMID:30851411 Rab22a Rat sodium arsenite increases expression ISO RAB22A (Homo sapiens) 6480464 sodium arsenite results in increased expression of RAB22A mRNA CTD PMID:24431212 and PMID:38568856 Rab22a Rat sunitinib increases expression ISO RAB22A (Homo sapiens) 6480464 Sunitinib results in increased expression of RAB22A mRNA CTD PMID:31533062 Rab22a Rat temozolomide decreases expression ISO RAB22A (Homo sapiens) 6480464 Temozolomide results in decreased expression of RAB22A mRNA CTD PMID:31758290 Rab22a Rat tert-butyl hydroperoxide increases expression ISO RAB22A (Homo sapiens) 6480464 tert-Butylhydroperoxide results in increased expression of RAB22A mRNA CTD PMID:15336504 Rab22a Rat testosterone decreases expression ISO RAB22A (Homo sapiens) 6480464 Testosterone results in decreased expression of RAB22A mRNA CTD PMID:33359661 Rab22a Rat thiram increases expression ISO RAB22A (Homo sapiens) 6480464 Thiram results in increased expression of RAB22A mRNA CTD PMID:38568856 Rab22a Rat titanium dioxide decreases methylation ISO Rab22a (Mus musculus) 6480464 titanium dioxide results in decreased methylation of RAB22A gene CTD PMID:35295148 Rab22a Rat titanium dioxide increases methylation ISO Rab22a (Mus musculus) 6480464 titanium dioxide results in increased methylation of RAB22A gene CTD PMID:35295148 Rab22a Rat trichloroethene increases methylation EXP 6480464 Trichloroethylene results in increased methylation of RAB22A gene CTD PMID:27618143 Rab22a Rat triphenyl phosphate increases expression EXP 6480464 triphenyl phosphate results in increased expression of RAB22A mRNA CTD PMID:30589522 Rab22a Rat troglitazone decreases expression ISO Rab22a (Mus musculus) 6480464 troglitazone results in decreased expression of RAB22A mRNA CTD PMID:28973697 Rab22a Rat urethane increases expression ISO RAB22A (Homo sapiens) 6480464 Urethane results in increased expression of RAB22A mRNA CTD PMID:28818685 Rab22a Rat valproic acid increases methylation ISO RAB22A (Homo sapiens) 6480464 Valproic Acid results in increased methylation of RAB22A gene CTD PMID:29154799 Rab22a Rat valproic acid decreases expression ISO RAB22A (Homo sapiens) 6480464 Valproic Acid results in decreased expression of RAB22A mRNA CTD PMID:24935251 and PMID:28001369 Rab22a Rat valproic acid affects expression ISO RAB22A (Homo sapiens) 6480464 Valproic Acid affects the expression of RAB22A mRNA CTD PMID:25979313 Rab22a Rat valproic acid increases expression ISO RAB22A (Homo sapiens) 6480464 Valproic Acid results in increased expression of RAB22A mRNA CTD PMID:23179753 Rab22a Rat zinc atom multiple interactions ISO RAB22A (Homo sapiens) 6480464 [PCI 5002 co-treated with Zinc] results in increased expression of RAB22A mRNA CTD PMID:18593933 Rab22a Rat zinc(0) multiple interactions ISO RAB22A (Homo sapiens) 6480464 [PCI 5002 co-treated with Zinc] results in increased expression of RAB22A mRNA CTD PMID:18593933
Imported Annotations - KEGG (archival)
Rab22a Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 3 182,877,746 - 182,924,400 (+) NCBI GRCr8 mRatBN7.2 3 162,459,727 - 162,506,129 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 3 162,459,726 - 162,506,137 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 3 166,258,779 - 166,305,183 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 3 174,763,858 - 174,810,369 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 3 172,499,581 - 172,545,983 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 3 171,743,884 - 171,790,558 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 171,743,929 - 171,790,558 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 3 177,802,611 - 177,849,268 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 3 164,556,619 - 164,603,742 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 3 164,462,654 - 164,500,898 (+) NCBI Celera 3 161,643,762 - 161,690,130 (+) NCBI Celera Cytogenetic Map 3 q42 NCBI
RAB22A Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 20 58,309,715 - 58,367,507 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 20 58,309,715 - 58,367,507 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 20 56,884,771 - 56,942,563 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 20 56,318,177 - 56,375,969 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 20 56,318,176 - 56,375,968 NCBI Celera 20 53,625,236 - 53,683,029 (+) NCBI Celera Cytogenetic Map 20 q13.32 NCBI HuRef 20 53,667,419 - 53,725,442 (+) NCBI HuRef CHM1_1 20 56,786,311 - 56,844,104 (+) NCBI CHM1_1 T2T-CHM13v2.0 20 60,090,659 - 60,148,468 (+) NCBI T2T-CHM13v2.0
Rab22a Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 2 173,501,638 - 173,543,975 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 2 173,501,553 - 173,549,136 (+) Ensembl GRCm39 Ensembl GRCm38 2 173,659,836 - 173,702,186 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 2 173,659,760 - 173,707,343 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 2 173,485,346 - 173,527,683 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 2 173,302,800 - 173,347,611 (+) NCBI MGSCv36 mm8 Celera 2 179,627,701 - 179,670,031 (+) NCBI Celera Cytogenetic Map 2 H4 NCBI cM Map 2 97.26 NCBI
Rab22a Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955445 1,174,817 - 1,225,763 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955445 1,167,941 - 1,224,932 (-) NCBI ChiLan1.0 ChiLan1.0
RAB22A Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 21 64,066,823 - 64,126,006 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 20 64,059,943 - 64,119,126 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 20 54,655,014 - 54,714,349 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 20 55,929,798 - 55,982,739 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 20 55,929,801 - 55,983,009 (+) Ensembl panpan1.1 panPan2
RAB22A Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 24 43,109,489 - 43,157,932 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 24 43,108,918 - 43,157,932 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 24 42,355,057 - 42,404,621 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 24 43,974,055 - 44,023,796 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 24 43,973,367 - 44,024,744 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 24 43,076,468 - 43,125,967 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 24 43,197,302 - 43,246,562 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 24 43,855,771 - 43,905,501 (+) NCBI UU_Cfam_GSD_1.0
Rab22a
RAB22A Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 17 58,514,985 - 58,572,421 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 17 58,514,985 - 58,572,421 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 17 65,726,340 - 65,783,779 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
RAB22A Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 2 5,761,037 - 5,820,531 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 2 5,768,840 - 5,820,492 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666050 53,815,302 - 53,874,745 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Rab22a
.
Predicted Target Of
Count of predictions: 384 Count of miRNA genes: 224 Interacting mature miRNAs: 249 Transcripts: ENSRNOT00000064400 Prediction methods: Microtar, Miranda, Rnahybrid Result types: miRGate_prediction
12879876 Bw182 Body weight QTL 182 0.003 body mass (VT:0001259) body weight (CMO:0000012) 3 145925360 166177555 Rat 2301411 Bp320 Blood pressure QTL 320 0.001 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 3 145925360 166177555 Rat 2312673 Scl63 Serum cholesterol level QTL 63 0.001 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 3 98535255 168026850 Rat 12879872 Cm97 Cardiac mass QTL 97 0.001 heart left ventricle mass (VT:0007031) heart left ventricle weight to body weight ratio (CMO:0000530) 3 145925360 166177555 Rat 1598877 Bp285 Blood pressure QTL 285 1.5 0.03 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 3 120538241 165538241 Rat 1578653 Vnigr3 Vascular neointimal growth QTL 3 3.1 artery morphology trait (VT:0002191) artery neointimal hyperplastic lesion area (CMO:0001414) 3 130656562 169034231 Rat 12879873 Cm96 Cardiac mass QTL 96 0.001 heart mass (VT:0007028) heart wet weight to body weight ratio (CMO:0002408) 3 145925360 166177555 Rat 12879874 Cm98 Cardiac mass QTL 98 0.005 heart right ventricle mass (VT:0007033) heart right ventricle weight to body weight ratio (CMO:0000914) 3 145925360 166177555 Rat 1298068 Bp167 Blood pressure QTL 167 0.004 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 3 141074471 169034231 Rat 12879875 Kidm64 Kidney mass QTL 64 0.001 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 3 145925360 166177555 Rat 70216 Cm14 Cardiac mass QTL 14 2.1 heart mass (VT:0007028) heart wet weight (CMO:0000069) 3 31172320 163586636 Rat 2298477 Eau4 Experimental allergic uveoretinitis QTL 4 0.0011 uvea integrity trait (VT:0010551) experimental autoimmune uveitis score (CMO:0001504) 3 137398739 169034231 Rat 1300161 Rf10 Renal function QTL 10 3.57 renal blood flow trait (VT:2000006) absolute change in renal vascular resistance (CMO:0001900) 3 161192952 169034231 Rat 8552791 Vie2 Viral induced encephalitis QTL 2 4.1 brain integrity trait (VT:0010579) encephalitis incidence/prevalence measurement (CMO:0002361) 3 145956084 169034231 Rat 2317883 Alcrsp26 Alcohol response QTL 26 1.8 0.63 response to alcohol trait (VT:0010489) duration of loss of righting reflex (CMO:0002289) 3 145526770 169034231 Rat 9589106 Insul23 Insulin level QTL 23 13.86 0.001 blood insulin amount (VT:0001560) plasma insulin level (CMO:0000342) 3 131635904 169034231 Rat 10755461 Coatc16 Coat color QTL 16 coat/hair pigmentation trait (VT:0010463) pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) 3 122438700 167438700 Rat 1559282 Emca5 Estrogen-induced mammary cancer QTL 5 3.9 mammary gland integrity trait (VT:0010552) percentage of study population developing mammary tumors during a period of time (CMO:0000948) 3 43827364 169034231 Rat 2303620 Vencon4 Ventilatory control QTL 4 3.9 respiration trait (VT:0001943) tidal volume (CMO:0000222) 3 127162703 168026850 Rat 1576306 Schws3 Schwannoma susceptibility QTL 3 0.001 nervous system integrity trait (VT:0010566) percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017) 3 118839124 163839124 Rat 2312659 Slep7 Serum leptin concentration QTL 7 0.001 blood leptin amount (VT:0005667) serum leptin level (CMO:0000780) 3 98535255 168026850 Rat 1578666 Vnigr1 Vascular neointimal growth QTL 1 4.6 artery morphology trait (VT:0002191) artery lumen area (CMO:0001409) 3 149040888 168026850 Rat 1578656 Vnigr2 Vascular neointimal growth QTL 2 4.2 artery morphology trait (VT:0002191) lesioned artery residual lumen area (CMO:0001417) 3 130656562 169034231 Rat 8552952 Pigfal13 Plasma insulin-like growth factor 1 level QTL 13 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 3 138799500 169034231 Rat 12879871 Am7 Aortic mass QTL 7 0.001 aorta mass (VT:0002845) aorta weight to aorta length to body weight ratio (CMO:0002722) 3 145925360 166177555 Rat 631541 Bp81 Blood pressure QTL 81 4 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 3 124122556 169034231 Rat 2312670 Bw94 Body weight QTL 94 0.01 inguinal fat pad mass (VT:0010424) inguinal fat pad weight to body weight ratio (CMO:0001253) 3 98535255 168026850 Rat
D3Mco70
Rat Assembly Chr Position (strand) Source JBrowse Rnor_5.0 3 177,810,387 - 177,810,613 NCBI Rnor5.0 Rnor_5.0 3 177,810,491 - 177,810,613 NCBI Rnor5.0 RGSC_v3.4 3 164,564,233 - 164,564,354 UniSTS RGSC3.4 RGSC_v3.4 3 164,564,129 - 164,564,354 UniSTS RGSC3.4 Celera 3 161,651,272 - 161,651,497 UniSTS Celera 3 161,651,376 - 161,651,497 UniSTS Cytogenetic Map 3 q42 UniSTS
AW319644
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 3 162,500,737 - 162,500,883 (+) MAPPER mRatBN7.2 Rnor_6.0 3 171,785,159 - 171,785,304 NCBI Rnor6.0 Rnor_5.0 3 177,843,869 - 177,844,014 UniSTS Rnor5.0 RGSC_v3.4 3 164,598,343 - 164,598,488 UniSTS RGSC3.4 Celera 3 161,684,731 - 161,684,876 UniSTS Cytogenetic Map 3 q42 UniSTS
AI662177
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 3 162,505,970 - 162,506,070 (+) MAPPER mRatBN7.2 Rnor_6.0 3 171,790,392 - 171,790,491 NCBI Rnor6.0 Rnor_5.0 3 177,849,102 - 177,849,201 UniSTS Rnor5.0 RGSC_v3.4 3 164,603,576 - 164,603,675 UniSTS RGSC3.4 Celera 3 161,689,964 - 161,690,063 UniSTS Cytogenetic Map 3 q42 UniSTS
RH130380
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 3 162,505,856 - 162,506,036 (+) MAPPER mRatBN7.2 Rnor_6.0 3 171,790,278 - 171,790,457 NCBI Rnor6.0 Rnor_5.0 3 177,848,988 - 177,849,167 UniSTS Rnor5.0 RGSC_v3.4 3 164,603,462 - 164,603,641 UniSTS RGSC3.4 Celera 3 161,689,850 - 161,690,029 UniSTS RH 3.4 Map 3 1498.6 UniSTS Cytogenetic Map 3 q42 UniSTS
RH137591
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 3 162,496,957 - 162,497,167 (+) MAPPER mRatBN7.2 Rnor_6.0 3 171,781,379 - 171,781,588 NCBI Rnor6.0 Rnor_5.0 3 177,840,089 - 177,840,298 UniSTS Rnor5.0 RGSC_v3.4 3 164,594,563 - 164,594,772 UniSTS RGSC3.4 Celera 3 161,680,951 - 161,681,160 UniSTS Cytogenetic Map 3 q42 UniSTS
UniSTS:234620
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 3 162,499,964 - 162,500,074 (+) MAPPER mRatBN7.2 Rnor_6.0 3 171,784,386 - 171,784,495 NCBI Rnor6.0 Rnor_5.0 3 177,843,096 - 177,843,205 UniSTS Rnor5.0 RGSC_v3.4 3 164,597,570 - 164,597,679 UniSTS RGSC3.4 Celera 3 161,683,958 - 161,684,067 UniSTS Cytogenetic Map 3 q42 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000064400 ⟹ ENSRNOP00000061148
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 162,459,728 - 162,500,639 (+) Ensembl Rnor_6.0 Ensembl 3 171,743,950 - 171,785,258 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000079113 ⟹ ENSRNOP00000072834
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 162,459,747 - 162,506,137 (+) Ensembl Rnor_6.0 Ensembl 3 171,743,929 - 171,790,558 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000098024 ⟹ ENSRNOP00000087167
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 162,460,686 - 162,506,137 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000101727 ⟹ ENSRNOP00000091594
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 162,459,726 - 162,498,025 (+) Ensembl
RefSeq Acc Id:
NM_001398945 ⟹ NP_001385874
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 3 182,877,998 - 182,924,400 (+) NCBI mRatBN7.2 3 162,459,727 - 162,506,129 (+) NCBI
RefSeq Acc Id:
XM_063284293 ⟹ XP_063140363
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 3 182,877,746 - 182,916,296 (+) NCBI
Ensembl Acc Id:
ENSRNOP00000072834 ⟸ ENSRNOT00000079113
Ensembl Acc Id:
ENSRNOP00000061148 ⟸ ENSRNOT00000064400
Ensembl Acc Id:
ENSRNOP00000087167 ⟸ ENSRNOT00000098024
Ensembl Acc Id:
ENSRNOP00000091594 ⟸ ENSRNOT00000101727
RefSeq Acc Id:
NP_001385874 ⟸ NM_001398945
- UniProtKB:
D4A9H0 (UniProtKB/TrEMBL), A0A9K3Y893 (UniProtKB/TrEMBL), B0BN19 (UniProtKB/TrEMBL), A0A0G2K3Z3 (UniProtKB/TrEMBL), A6KL10 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_063140363 ⟸ XM_063284293
- Peptide Label:
isoform X1
- UniProtKB:
A0A8I6AES5 (UniProtKB/TrEMBL)
RGD ID: 13692715 Promoter ID: EPDNEW_R3240 Type: multiple initiation site Name: Rab22a_1 Description: RAB22A, member RAS oncogene family SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 3 171,743,909 - 171,743,969 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2008-04-30
Rab22a
RAB22A, member RAS oncogene family
Rab22a_predicted
RAB22A, member RAS oncogene family (predicted)
'predicted' is removed
2292626 APPROVED
2005-01-12
Rab22a_predicted
RAB22A, member RAS oncogene family (predicted)
Symbol and Name status set to approved
70820 APPROVED
