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Gene: Cxcr1 (C-X-C motif chemokine receptor 1) Chinchilla lanigera

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Symbol:

Cxcr1

Name:

C-X-C motif chemokine receptor 1

RGD ID:

9035385

Description:

ENCODES a protein that exhibits interleukin-8 binding (ortholog); interleukin-8 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); receptor internalization (ortholog); ASSOCIATED WITH alacrima, achalasia, and impaired intellectual development syndrome (ortholog); cerebrotendinous xanthomatosis (ortholog); cholangiocarcinoma (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

C-X-C chemokine receptor type 1; chemokine (C-X-C motif) receptor 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955453	15,194,205 - 15,195,272 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955453	15,181,027 - 15,196,224 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cxcr1	Chinchilla	COVID-19		ISO	CXCR1 (Homo sapiens)	9068941	mRNA:increased expression:bronchoalveolar lavage (human)	RGD	PMID:32407669 and REF_RGD_ID:30296672
Cxcr1	Chinchilla	end stage renal disease		ISO	CXCR1 (Homo sapiens)	9068941		RGD	PMID:20649681 and REF_RGD_ID:7207863
Cxcr1	Chinchilla	membranoproliferative glomerulonephritis		ISO	Cxcr1 (Rattus norvegicus)	9068941		RGD	PMID:23336303 and REF_RGD_ID:7207859
Cxcr1	Chinchilla	pyelonephritis		ISO	CXCR1 (Homo sapiens)	9068941	DNA:SNP: :2608G>C (human)	RGD	PMID:22325052 and REF_RGD_ID:7207860
Cxcr1	Chinchilla	pyelonephritis		ISO	CXCR1 (Homo sapiens)	9068941	DNA:mutations and polymorphisms: :multiple	RGD	PMID:17786197 and REF_RGD_ID:7207864
Cxcr1	Chinchilla	Transplant Rejection		ISO	CXCR1 (Homo sapiens)	9068941	DNA:SNP:promoter:g.-2668G>A (rs2671222) (human)	RGD	PMID:21452410 and REF_RGD_ID:7257676
Cxcr1	Chinchilla	urinary tract infection		ISO	CXCR1 (Homo sapiens)	9068941		RGD	PMID:21151974 and REF_RGD_ID:7207862

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cxcr1	Chinchilla	alacrima, achalasia, and impaired intellectual development syndrome		ISO	CXCR1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Alacrima more ...	ClinVar	PMID:28492532
Cxcr1	Chinchilla	cerebrotendinous xanthomatosis		ISO	CXCR1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Cerebrotendinous Xanthomatosis	ClinVar	PMID:28492532
Cxcr1	Chinchilla	cholangiocarcinoma		ISO	CXCR1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Cholangiocarcinoma	ClinVar	PMID:18550579
Cxcr1	Chinchilla	human immunodeficiency virus infectious disease		ISO	CXCR1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:18550579 more ...
Cxcr1	Chinchilla	Neurodevelopmental Disorders		ISO	CXCR1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868
Cxcr1	Chinchilla	paroxysmal nonkinesigenic dyskinesia 1		ISO	CXCR1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Paroxysmal nonkinesigenic dyskinesia	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cxcr1	Chinchilla	ulcerative colitis		ISO	CXCR1 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:21297633

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cxcr1	Chinchilla	human immunodeficiency virus infectious disease		ISO	CXCR1 (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cxcr1	Chinchilla	cell surface receptor signaling pathway	involved_in	ISO	CXCR1 (Homo sapiens)	9068941	PMID:10734056	UniProt	PMID:10734056
Cxcr1	Chinchilla	receptor internalization	involved_in	ISO	CXCR1 (Homo sapiens)	9068941	PMID:10734056	UniProt	PMID:10734056

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cxcr1	Chinchilla	interleukin-8 binding	enables	ISO	UniProtKB:P10145	9068941	PMID:11564821	UniProt	PMID:11564821
Cxcr1	Chinchilla	interleukin-8 receptor activity	enables	ISO	CXCR1 (Homo sapiens)	9068941	PMID:10734056	UniProt	PMID:10734056
Cxcr1	Chinchilla	protein binding	enables	ISO	UniProtKB:P10145	9068941	PMID:30384436	DisProt	PMID:30384436
Cxcr1	Chinchilla	protein binding	enables	ISO	UniProtKB:A5PKU2 more ...	9068941	PMID:32296183	IntAct	PMID:32296183

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

PMID:22301074	PMID:30032202

Cxcr1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955453	15,194,205 - 15,195,272 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955453	15,181,027 - 15,196,224 (+)	NCBI	ChiLan1.0	ChiLan1.0

CXCR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	218,162,841 - 218,166,962 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	218,162,841 - 218,166,962 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	219,027,564 - 219,031,685 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	218,735,813 - 218,739,961 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	218,853,075 - 218,857,222	NCBI
Celera	2	212,794,153 - 212,798,301 (-)	NCBI		Celera
Cytogenetic Map	2	q35	NCBI
HuRef	2	210,880,311 - 210,884,459 (-)	NCBI		HuRef
CHM1_1	2	219,034,054 - 219,038,202 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	218,648,531 - 218,652,652 (-)	NCBI		T2T-CHM13v2.0

Cxcr1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	74,228,862 - 74,233,867 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	74,230,944 - 74,233,790 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	74,191,785 - 74,194,708 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	74,191,785 - 74,194,631 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	74,238,359 - 74,241,205 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	74,124,992 - 74,126,442 (-)	NCBI		MGSCv36	mm8
Celera	1	74,753,154 - 74,755,998 (-)	NCBI		Celera
Cytogenetic Map	1	C3	NCBI
cM Map	1	38.44	NCBI

Cxcr1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	83,216,040 - 83,220,225 (-)	NCBI		GRCr8
mRatBN7.2	9	75,766,894 - 75,771,079 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	75,766,770 - 75,771,084 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	84,221,913 - 84,222,962 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	89,350,842 - 89,351,891 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	87,737,061 - 87,738,110 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	81,466,430 - 81,469,299 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	81,466,332 - 81,469,274 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	81,232,019 - 81,235,417 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	73,510,488 - 73,511,537 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	73,657,469 - 73,658,519 (-)	NCBI
Celera	9	73,345,732 - 73,346,781 (-)	NCBI		Celera
Cytogenetic Map	9	q33	NCBI

CXCR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	120,802,384 - 120,862,522 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	120,817,351 - 120,877,489 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	105,429,576 - 105,433,243 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	224,027,533 - 224,031,675 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	224,028,838 - 224,029,890 (-)	Ensembl	panpan1.1		panPan2

Cxcr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	174,371,818 - 174,373,425 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936569	715,129 - 716,181 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936569	715,129 - 716,187 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CXCR1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	104,052,709 - 104,056,388 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	104,053,544 - 104,054,620 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	95,344,477 - 95,348,616 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cxcr1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624823	6,859,356 - 6,860,426 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624823	6,857,649 - 6,861,219 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005395665	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013519957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013519958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013519959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01044886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01195511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000026265 ⟹ ENSCLAP00000025959

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955453	15,194,205 - 15,195,272 (+)	Ensembl

RefSeq Acc Id:

XM_005395665 ⟹ XP_005395722

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955453	15,190,090 - 15,196,060 (+)	NCBI

Sequence:

show sequence

GCCAGATGACTGCACTGGGGCCGCACCTGTCACAGTCAGCACGGAGTGTTCTCGTAGCACGAGGAACAGAACAGCTCGGATTCCCTCTGTTAGGTCACTCTGGTCTCTGAGCTGCTGTCTTCTACATC
AGACACACTTGGCTCGTGCCTCAGAGCCAACCATGGGTGAATTTCAGAACTTCGTTTGGAGTGTTTCTGATGAGATGTGGTTTGAGGGGTTTGAAAATTTCACTGGCATGCCACCCACAGGAGAAGAT
TTTAGACCCTGTGATACGGACGCTGATGTGCTCAGCAGCTCTGCTCTGGTTGCTGTCTATATCATGGTGTTCCTGCTGAGCCTGCTGGGAAACTCTCTGGTGATGGTGGTCATCTTATCCAGCCAGGT
CACCCGCTCTGTCACTGATGTCTACCTGCTGAACTTGGCCATCGCTGACCTGCTCTTTGCCCTGACCTTGCCTGTCTGGGCTGTCAACAAGGAGAAGGGCTGGATCTTTGGCACACCCTTTTGCAAGA
TCGTCTCTCTCCTGAAGGAAGTCAACTTCTACAGCGGCATTCTACTACTCGCCGGCATCAGCATGGACCGCTACCTGGCCATCGTCCACGCCACACACACTCTGACCCAAAAGCGCCACTTGGTCAAG
TTCATATGCATGGGCATCTGGGTAGTATCTTTGATTCTCTCCTTGCCCACCTTCCTCTTCCGCAAAGCCTTCCCTCTAAACGAGTCCATCACTGTCTGCTACGAGTTTCTGGGTAGTGACACGACCAA
ATGGCGCCTGGTGCTGCGCTTCGTGTTCCAGATCTTCGGCTTCATCCTGCCACTGCTGATCATGCTGTTCTGCTACAGCTTCACGCTGCGCACACTGTTTAAGGCCCAAATGGGGCAGAAGCACCGGG
CCATGAGGGTCATCTTTGCTGTTGTGCTTGTCTTCCTGCTCTGCTGGCTGCCCTACAACCTGGTGCTGCTTGTGGACACCTTCATGAGGAACCACTGGATCGAAGAGACCTGTGAGCGCCGCAATCAT
ATTGACCGAGCCCTGGAGGTCACTGAGATCTTGGGCTTCCTCCACAGCTGCCTCAACCCCATCATCTATGCCTTCATTGGCCAAAAGTTTCGCCAAGGACTCCTCAAGGTCCTCGCTGCCCGCGGTCT
GATCAGCAAGGAGTTCTTGGCCCGTCACCGTGTTCCCTCTCACTGCTCCTCCAGCACTATCGCTTCAAACCTCTGAATTCCACTGGTGAAAGAGTCTCTCACTCTCTAAGGAAAGAAGAGCCATCAGC
CCAAGGTTGTGTGGGTGGGATAGACTGGCTCAAACAGATCCTCTGGGTTTGAGGGGCAACTACAGAGTGTGGGGGAGTTAGGGACCGGTGCCTCAGGGACCACCTCAGCCTTCTGAGGAAGTGCCAGA
GACCTCCAAGGGCCAGCTTCACACGGCCGTGAAAAGGAGCAGCCTCATTTCTGTTGAACTTGTGCATCTTTGATCCATTAACTAGGTAATTAGCATGGTCACACCTGTAGCCCGCATCTTACAGTAAA
GCAAAGAACTAGGGCCAAAGCTGTTTTCCCAAATGGGCAGGACCCTCTTGTTAGTCCTTGCTGGATCATCACCCCAAACGCCGAGCATGTCTTAAGCAGGCTGCATTTTTTCTGTGCCCTCTGATCTC
ATGGGACTCTTGTCCCACCCCTTGCAGTTGTAGTATCTGCTGAGGATCTCAAGGCAGGTGCTGCTGAAGCATCACACCACCAGGTGGCCTTGTGCTGGAGCCGGACATAATTTCCCCTGGGGTGCTGT
GGATGTTCGGGAAACCAGTGCTATAGCATGAAGTCCTCTTTATTCCATGATCAGAGACAGGCAATGAACATGCTGGATATGTGCAGAGCTGTGGATGGAACAAGACTCACCCTCTTGACACTTCCAAC
CTGACATGGAGCATTAGCAACCTCACAGACCTGCACACACTTGGCAGTCAGCCGGCCAGCCCCATATTTCCAATAAAATTTCTTTCCTGGGGTGGA

hide sequence

RefSeq Acc Id:

XM_013519957 ⟹ XP_013375411

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955453	15,181,027 - 15,196,224 (+)	NCBI

Sequence:

show sequence

CTTCGCATGAGGACATATCAAGAAGACAGCAGACTGTGAGCGAGGAAGGAACCTGTGCGGGAACCCGGCTGCTGCTGGTCTTAACGCTCTGGGCTCCAGACTTTCCCTCTGTTAGGTCACTCTGGTCT
CTGAGCTGCTGTCTTCTACATCAGACACACTTGGCTCGTGCCTCAGAGCCAACCATGGGTGAATTTCAGAACTTCGTTTGGAGTGTTTCTGATGAGATGTGGTTTGAGGGGTTTGAAAATTTCACTGG
CATGCCACCCACAGGAGAAGATTTTAGACCCTGTGATACGGACGCTGATGTGCTCAGCAGCTCTGCTCTGGTTGCTGTCTATATCATGGTGTTCCTGCTGAGCCTGCTGGGAAACTCTCTGGTGATGG
TGGTCATCTTATCCAGCCAGGTCACCCGCTCTGTCACTGATGTCTACCTGCTGAACTTGGCCATCGCTGACCTGCTCTTTGCCCTGACCTTGCCTGTCTGGGCTGTCAACAAGGAGAAGGGCTGGATC
TTTGGCACACCCTTTTGCAAGATCGTCTCTCTCCTGAAGGAAGTCAACTTCTACAGCGGCATTCTACTACTCGCCGGCATCAGCATGGACCGCTACCTGGCCATCGTCCACGCCACACACACTCTGAC
CCAAAAGCGCCACTTGGTCAAGTTCATATGCATGGGCATCTGGGTAGTATCTTTGATTCTCTCCTTGCCCACCTTCCTCTTCCGCAAAGCCTTCCCTCTAAACGAGTCCATCACTGTCTGCTACGAGT
TTCTGGGTAGTGACACGACCAAATGGCGCCTGGTGCTGCGCTTCGTGTTCCAGATCTTCGGCTTCATCCTGCCACTGCTGATCATGCTGTTCTGCTACAGCTTCACGCTGCGCACACTGTTTAAGGCC
CAAATGGGGCAGAAGCACCGGGCCATGAGGGTCATCTTTGCTGTTGTGCTTGTCTTCCTGCTCTGCTGGCTGCCCTACAACCTGGTGCTGCTTGTGGACACCTTCATGAGGAACCACTGGATCGAAGA
GACCTGTGAGCGCCGCAATCATATTGACCGAGCCCTGGAGGTCACTGAGATCTTGGGCTTCCTCCACAGCTGCCTCAACCCCATCATCTATGCCTTCATTGGCCAAAAGTTTCGCCAAGGACTCCTCA
AGGTCCTCGCTGCCCGCGGTCTGATCAGCAAGGAGTTCTTGGCCCGTCACCGTGTTCCCTCTCACTGCTCCTCCAGCACTATCGCTTCAAACCTCTGAATTCCACTGGTGAAAGAGTCTCTCACTCTC
TAAGGAAAGAAGAGCCATCAGCCCAAGGTTGTGTGGGTGGGATAGACTGGCTCAAACAGATCCTCTGGGTTTGAGGGGCAACTACAGAGTGTGGGGGAGTTAGGGACCGGTGCCTCAGGGACCACCTC
AGCCTTCTGAGGAAGTGCCAGAGACCTCCAAGGGCCAGCTTCACACGGCCGTGAAAAGGAGCAGCCTCATTTCTGTTGAACTTGTGCATCTTTGATCCATTAACTAGGTAATTAGCATGGTCACACCT
GTAGCCCGCATCTTACAGTAAAGCAAAGAACTAGGGCCAAAGCTGTTTTCCCAAATGGGCAGGACCCTCTTGTTAGTCCTTGCTGGATCATCACCCCAAACGCCGAGCATGTCTTAAGCAGGCTGCAT
TTTTTCTGTGCCCTCTGATCTCATGGGACTCTTGTCCCACCCCTTGCAGTTGTAGTATCTGCTGAGGATCTCAAGGCAGGTGCTGCTGAAGCATCACACCACCAGGTGGCCTTGTGCTGGAGCCGGAC
ATAATTTCCCCTGGGGTGCTGTGGATGTTCGGGAAACCAGTGCTATAGCATGAAGTCCTCTTTATTCCATGATCAGAGACAGGCAATGAACATGCTGGATATGTGCAGAGCTGTGGATGGAACAAGAC
TCACCCTCTTGACACTTCCAACCTGACATGGAGCATTAGCAACCTCACAGACCTGCACACACTTGGCAGTCAGCCGGCCAGCCCCATATTTCCAATAAAATTTCTTTCCTGGGGTGGATCTCGCCTGG
CTCCTTTGTATTGTACTAGCCACCCCCCCATGCTTCCTTGGAATTACTGTAGTTTCTGTTTTCCATCCCTGAAGGCAAAACTCTTCTGTTTTGTTCACTCTACATCCCTGGTGTCCGACACACTGCCC
AGAGCCCATTAAATGCTCGGTCAATA

hide sequence

RefSeq Acc Id:

XM_013519958 ⟹ XP_013375412

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955453	15,181,028 - 15,196,224 (+)	NCBI

Sequence:

show sequence

TTCGCATGAGGACATATCAAGAAGACAGCAGACTGTGAGCGAGGAAGGAACCTGTGCGGGAACC
CGGCTGCTGCTGGTCTTAACGCTCTGGGCTCCAGACTAGCCAACCATGGGTGAATTTCAGAACTTCGTTTGGAGTGTTTCTGATGAGATGTGGTTTGAGGGGTTTGAAAATTTCACTGGCATGCCACC
CACAGGAGAAGATTTTAGACCCTGTGATACGGACGCTGATGTGCTCAGCAGCTCTGCTCTGGTTGCTGTCTATATCATGGTGTTCCTGCTGAGCCTGCTGGGAAACTCTCTGGTGATGGTGGTCATCT
TATCCAGCCAGGTCACCCGCTCTGTCACTGATGTCTACCTGCTGAACTTGGCCATCGCTGACCTGCTCTTTGCCCTGACCTTGCCTGTCTGGGCTGTCAACAAGGAGAAGGGCTGGATCTTTGGCACA
CCCTTTTGCAAGATCGTCTCTCTCCTGAAGGAAGTCAACTTCTACAGCGGCATTCTACTACTCGCCGGCATCAGCATGGACCGCTACCTGGCCATCGTCCACGCCACACACACTCTGACCCAAAAGCG
CCACTTGGTCAAGTTCATATGCATGGGCATCTGGGTAGTATCTTTGATTCTCTCCTTGCCCACCTTCCTCTTCCGCAAAGCCTTCCCTCTAAACGAGTCCATCACTGTCTGCTACGAGTTTCTGGGTA
GTGACACGACCAAATGGCGCCTGGTGCTGCGCTTCGTGTTCCAGATCTTCGGCTTCATCCTGCCACTGCTGATCATGCTGTTCTGCTACAGCTTCACGCTGCGCACACTGTTTAAGGCCCAAATGGGG
CAGAAGCACCGGGCCATGAGGGTCATCTTTGCTGTTGTGCTTGTCTTCCTGCTCTGCTGGCTGCCCTACAACCTGGTGCTGCTTGTGGACACCTTCATGAGGAACCACTGGATCGAAGAGACCTGTGA
GCGCCGCAATCATATTGACCGAGCCCTGGAGGTCACTGAGATCTTGGGCTTCCTCCACAGCTGCCTCAACCCCATCATCTATGCCTTCATTGGCCAAAAGTTTCGCCAAGGACTCCTCAAGGTCCTCG
CTGCCCGCGGTCTGATCAGCAAGGAGTTCTTGGCCCGTCACCGTGTTCCCTCTCACTGCTCCTCCAGCACTATCGCTTCAAACCTCTGAATTCCACTGGTGAAAGAGTCTCTCACTCTCTAAGGAAAG
AAGAGCCATCAGCCCAAGGTTGTGTGGGTGGGATAGACTGGCTCAAACAGATCCTCTGGGTTTGAGGGGCAACTACAGAGTGTGGGGGAGTTAGGGACCGGTGCCTCAGGGACCACCTCAGCCTTCTG
AGGAAGTGCCAGAGACCTCCAAGGGCCAGCTTCACACGGCCGTGAAAAGGAGCAGCCTCATTTCTGTTGAACTTGTGCATCTTTGATCCATTAACTAGGTAATTAGCATGGTCACACCTGTAGCCCGC
ATCTTACAGTAAAGCAAAGAACTAGGGCCAAAGCTGTTTTCCCAAATGGGCAGGACCCTCTTGTTAGTCCTTGCTGGATCATCACCCCAAACGCCGAGCATGTCTTAAGCAGGCTGCATTTTTTCTGT
GCCCTCTGATCTCATGGGACTCTTGTCCCACCCCTTGCAGTTGTAGTATCTGCTGAGGATCTCAAGGCAGGTGCTGCTGAAGCATCACACCACCAGGTGGCCTTGTGCTGGAGCCGGACATAATTTCC
CCTGGGGTGCTGTGGATGTTCGGGAAACCAGTGCTATAGCATGAAGTCCTCTTTATTCCATGATCAGAGACAGGCAATGAACATGCTGGATATGTGCAGAGCTGTGGATGGAACAAGACTCACCCTCT
TGACACTTCCAACCTGACATGGAGCATTAGCAACCTCACAGACCTGCACACACTTGGCAGTCAGCCGGCCAGCCCCATATTTCCAATAAAATTTCTTTCCTGGGGTGGATCTCGCCTGGCTCCTTTGT
ATTGTACTAGCCACCCCCCCATGCTTCCTTGGAATTACTGTAGTTTCTGTTTTCCATCCCTGAAGGCAAAACTCTTCTGTTTTGTTCACTCTACATCCCTGGTGTCCGACACACTGCCCAGAGCCCAT
TAAATGCTCGGTCAATA

hide sequence

RefSeq Acc Id:

XM_013519959 ⟹ XP_013375413

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955453	15,191,306 - 15,196,224 (+)	NCBI

Sequence:

show sequence

CAGCTCATAGTGAAGTTCCCTCTGTTAGGTCACTCTGGTCTCTGAGCTGCTGTCTTCTACATCA
GACACACTTGGCTCGTGCCTCAGAGCCAACCATGGGTGAATTTCAGAACTTCGTTTGGAGTGTTTCTGATGAGATGTGGTTTGAGGGGTTTGAAAATTTCACTGGCATGCCACCCACAGGAGAAGATT
TTAGACCCTGTGATACGGACGCTGATGTGCTCAGCAGCTCTGCTCTGGTTGCTGTCTATATCATGGTGTTCCTGCTGAGCCTGCTGGGAAACTCTCTGGTGATGGTGGTCATCTTATCCAGCCAGGTC
ACCCGCTCTGTCACTGATGTCTACCTGCTGAACTTGGCCATCGCTGACCTGCTCTTTGCCCTGACCTTGCCTGTCTGGGCTGTCAACAAGGAGAAGGGCTGGATCTTTGGCACACCCTTTTGCAAGAT
CGTCTCTCTCCTGAAGGAAGTCAACTTCTACAGCGGCATTCTACTACTCGCCGGCATCAGCATGGACCGCTACCTGGCCATCGTCCACGCCACACACACTCTGACCCAAAAGCGCCACTTGGTCAAGT
TCATATGCATGGGCATCTGGGTAGTATCTTTGATTCTCTCCTTGCCCACCTTCCTCTTCCGCAAAGCCTTCCCTCTAAACGAGTCCATCACTGTCTGCTACGAGTTTCTGGGTAGTGACACGACCAAA
TGGCGCCTGGTGCTGCGCTTCGTGTTCCAGATCTTCGGCTTCATCCTGCCACTGCTGATCATGCTGTTCTGCTACAGCTTCACGCTGCGCACACTGTTTAAGGCCCAAATGGGGCAGAAGCACCGGGC
CATGAGGGTCATCTTTGCTGTTGTGCTTGTCTTCCTGCTCTGCTGGCTGCCCTACAACCTGGTGCTGCTTGTGGACACCTTCATGAGGAACCACTGGATCGAAGAGACCTGTGAGCGCCGCAATCATA
TTGACCGAGCCCTGGAGGTCACTGAGATCTTGGGCTTCCTCCACAGCTGCCTCAACCCCATCATCTATGCCTTCATTGGCCAAAAGTTTCGCCAAGGACTCCTCAAGGTCCTCGCTGCCCGCGGTCTG
ATCAGCAAGGAGTTCTTGGCCCGTCACCGTGTTCCCTCTCACTGCTCCTCCAGCACTATCGCTTCAAACCTCTGAATTCCACTGGTGAAAGAGTCTCTCACTCTCTAAGGAAAGAAGAGCCATCAGCC
CAAGGTTGTGTGGGTGGGATAGACTGGCTCAAACAGATCCTCTGGGTTTGAGGGGCAACTACAGAGTGTGGGGGAGTTAGGGACCGGTGCCTCAGGGACCACCTCAGCCTTCTGAGGAAGTGCCAGAG
ACCTCCAAGGGCCAGCTTCACACGGCCGTGAAAAGGAGCAGCCTCATTTCTGTTGAACTTGTGCATCTTTGATCCATTAACTAGGTAATTAGCATGGTCACACCTGTAGCCCGCATCTTACAGTAAAG
CAAAGAACTAGGGCCAAAGCTGTTTTCCCAAATGGGCAGGACCCTCTTGTTAGTCCTTGCTGGATCATCACCCCAAACGCCGAGCATGTCTTAAGCAGGCTGCATTTTTTCTGTGCCCTCTGATCTCA
TGGGACTCTTGTCCCACCCCTTGCAGTTGTAGTATCTGCTGAGGATCTCAAGGCAGGTGCTGCTGAAGCATCACACCACCAGGTGGCCTTGTGCTGGAGCCGGACATAATTTCCCCTGGGGTGCTGTG
GATGTTCGGGAAACCAGTGCTATAGCATGAAGTCCTCTTTATTCCATGATCAGAGACAGGCAATGAACATGCTGGATATGTGCAGAGCTGTGGATGGAACAAGACTCACCCTCTTGACACTTCCAACC
TGACATGGAGCATTAGCAACCTCACAGACCTGCACACACTTGGCAGTCAGCCGGCCAGCCCCATATTTCCAATAAAATTTCTTTCCTGGGGTGGATCTCGCCTGGCTCCTTTGTATTGTACTAGCCAC
CCCCCCATGCTTCCTTGGAATTACTGTAGTTTCTGTTTTCCATCCCTGAAGGCAAAACTCTTCTGTTTTGTTCACTCTACATCCCTGGTGTCCGACACACTGCCCAGAGCCCATTAAATGCTCGGTCA
ATA

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Protein RefSeqs	XP_005395722	(Get FASTA)	NCBI Sequence Viewer
	XP_013375411	(Get FASTA)	NCBI Sequence Viewer
	XP_013375412	(Get FASTA)	NCBI Sequence Viewer
	XP_013375413	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000025959
	ENSCLAP00000025959.1

RefSeq Acc Id:

XP_005395722 ⟸ XM_005395665

- UniProtKB:

A0A8C2WB81 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGEFQNFVWSVSDEMWFEGFENFTGMPPTGEDFRPCDTDADVLSSSALVAVYIMVFLLSLLGNSLVMVVILSSQVTRSVTDVYLLNLAIADLLFALTLPVWAVNKEKGWIFGTPFCKIVSLLKEVNFY
SGILLLAGISMDRYLAIVHATHTLTQKRHLVKFICMGIWVVSLILSLPTFLFRKAFPLNESITVCYEFLGSDTTKWRLVLRFVFQIFGFILPLLIMLFCYSFTLRTLFKAQMGQKHRAMRVIFAVVLV
FLLCWLPYNLVLLVDTFMRNHWIEETCERRNHIDRALEVTEILGFLHSCLNPIIYAFIGQKFRQGLLKVLAARGLISKEFLARHRVPSHCSSSTIASNL

hide sequence

RefSeq Acc Id:

XP_013375411 ⟸ XM_013519957

- UniProtKB:

A0A8C2WB81 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGEFQNFVWSVSDEMWFEGFENFTGMPPTGEDFRPCDTDADVLSSSALVAVYIMVFLLSLLGNSLVMVVILSSQVTRSVTDVYLLNLAIADLLFALTLPVWAVNKEKGWIFGTPFCKIVSLLKEVNFY
SGILLLAGISMDRYLAIVHATHTLTQKRHLVKFICMGIWVVSLILSLPTFLFRKAFPLNESITVCYEFLGSDTTKWRLVLRFVFQIFGFILPLLIMLFCYSFTLRTLFKAQMGQKHRAMRVIFAVVLV
FLLCWLPYNLVLLVDTFMRNHWIEETCERRNHIDRALEVTEILGFLHSCLNPIIYAFIGQKFRQGLLKVLAARGLISKEFLARHRVPSHCSSSTIASNL

hide sequence

RefSeq Acc Id:

XP_013375412 ⟸ XM_013519958

- UniProtKB:

A0A8C2WB81 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGEFQNFVWSVSDEMWFEGFENFTGMPPTGEDFRPCDTDADVLSSSALVAVYIMVFLLSLLGNSLVMVVILSSQVTRSVTDVYLLNLAIADLLFALTLPVWAVNKEKGWIFGTPFCKIVSLLKEVNFY
SGILLLAGISMDRYLAIVHATHTLTQKRHLVKFICMGIWVVSLILSLPTFLFRKAFPLNESITVCYEFLGSDTTKWRLVLRFVFQIFGFILPLLIMLFCYSFTLRTLFKAQMGQKHRAMRVIFAVVLV
FLLCWLPYNLVLLVDTFMRNHWIEETCERRNHIDRALEVTEILGFLHSCLNPIIYAFIGQKFRQGLLKVLAARGLISKEFLARHRVPSHCSSSTIASNL

hide sequence

RefSeq Acc Id:

XP_013375413 ⟸ XM_013519959

- UniProtKB:

A0A8C2WB81 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGEFQNFVWSVSDEMWFEGFENFTGMPPTGEDFRPCDTDADVLSSSALVAVYIMVFLLSLLGNSLVMVVILSSQVTRSVTDVYLLNLAIADLLFALTLPVWAVNKEKGWIFGTPFCKIVSLLKEVNFY
SGILLLAGISMDRYLAIVHATHTLTQKRHLVKFICMGIWVVSLILSLPTFLFRKAFPLNESITVCYEFLGSDTTKWRLVLRFVFQIFGFILPLLIMLFCYSFTLRTLFKAQMGQKHRAMRVIFAVVLV
FLLCWLPYNLVLLVDTFMRNHWIEETCERRNHIDRALEVTEILGFLHSCLNPIIYAFIGQKFRQGLLKVLAARGLISKEFLARHRVPSHCSSSTIASNL

hide sequence

Ensembl Acc Id:

ENSCLAP00000025959 ⟸ ENSCLAT00000026265

Protein Domains

G-protein coupled receptors family 1 profile

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000018091	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000026265	ENTREZGENE
	ENSCLAT00000026265.1	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	Chemokine_CXCR_1/2	UniProtKB/TrEMBL
	GPCR1	UniProtKB/TrEMBL
	GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/TrEMBL
NCBI Gene	Cxcr1	ENTREZGENE
PANTHER	C-X-C CHEMOKINE RECEPTOR TYPE 1	UniProtKB/TrEMBL
	CELL ADHESION MOLECULE	UniProtKB/TrEMBL
Pfam	7tm_1	UniProtKB/TrEMBL
PRINTS	GPCRRHODOPSN	UniProtKB/TrEMBL
	INTRLEUKIN8R	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	A0A8C2WB81	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Cxcr1	C-X-C motif chemokine receptor 1		chemokine (C-X-C motif) receptor 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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