Symbol:
Epas1
Name:
endothelial PAS domain protein 1
RGD ID:
8967431
Description:
ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); cobalt ion binding (ortholog); DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel remodeling (ortholog); cell differentiation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute kidney failure (ortholog); azoospermia (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
endothelial PAS domain-containing protein 1
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information:
Annotation category: partial on reference assembly
Position:
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955441 13,244,626 - 13,328,369 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955441 13,244,626 - 13,328,220 (+) NCBI ChiLan1.0 ChiLan1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Imported Annotations - PID (archival)
Epas1 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955441 13,244,626 - 13,328,369 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955441 13,244,626 - 13,328,220 (+) NCBI ChiLan1.0 ChiLan1.0
EPAS1 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 2 46,297,407 - 46,386,697 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 2 46,293,667 - 46,386,697 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 2 46,524,546 - 46,613,836 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 2 46,378,067 - 46,467,340 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 2 46,436,213 - 46,525,486 NCBI Celera 2 46,363,267 - 46,452,583 (+) NCBI Celera Cytogenetic Map 2 p21 NCBI HuRef 2 46,262,570 - 46,351,445 (+) NCBI HuRef CHM1_1 2 46,455,122 - 46,544,416 (+) NCBI CHM1_1 T2T-CHM13v2.0 2 46,302,427 - 46,391,719 (+) NCBI T2T-CHM13v2.0
Epas1 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 17 87,061,292 - 87,140,838 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 17 87,061,128 - 87,140,838 (+) Ensembl GRCm39 Ensembl GRCm38 17 86,753,864 - 86,833,410 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 17 86,753,700 - 86,833,410 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 17 87,153,204 - 87,232,750 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 17 86,662,228 - 86,739,908 (+) NCBI MGSCv36 mm8 Celera 17 91,133,927 - 91,214,803 (+) NCBI Celera Cytogenetic Map 17 E4 NCBI cM Map 17 56.9 NCBI
Epas1 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 6 13,543,252 - 13,626,147 (-) NCBI GRCr8 mRatBN7.2 6 7,790,236 - 7,871,717 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 6 7,790,647 - 7,871,228 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 6 8,070,313 - 8,149,953 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 6 8,379,714 - 8,459,355 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 6 7,907,014 - 7,986,657 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 6 10,306,508 - 10,385,239 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 6 10,306,405 - 10,387,265 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 6 20,299,603 - 20,379,864 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 6 10,203,108 - 10,297,215 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 6 10,203,107 - 10,297,215 (+) NCBI Celera 6 7,526,511 - 7,605,382 (-) NCBI Celera Cytogenetic Map 6 q12 NCBI
EPAS1 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 12 80,015,546 - 80,104,928 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 2A 80,019,514 - 80,108,896 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 2A 46,403,411 - 46,492,734 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 2A 47,332,286 - 47,421,560 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 2A 47,332,308 - 47,421,560 (+) Ensembl panpan1.1 panPan2
EPAS1 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 10 48,550,836 - 48,636,776 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 10 48,551,410 - 48,634,844 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 10 48,405,643 - 48,491,569 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 10 49,422,114 - 49,508,080 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 10 49,422,316 - 49,508,077 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 10 49,131,051 - 49,216,377 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 10 49,421,043 - 49,506,595 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 10 49,603,605 - 49,689,524 (+) NCBI UU_Cfam_GSD_1.0
Epas1 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024406292 34,427,139 - 34,510,273 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936508 5,855,732 - 5,938,856 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936508 5,855,748 - 5,938,879 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
EPAS1 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 3 94,165,816 - 94,254,079 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 3 94,167,759 - 94,253,662 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 3 100,157,832 - 100,211,343 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
EPAS1 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 14 60,823,110 - 60,912,804 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 14 60,822,815 - 60,912,785 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666045 50,944,448 - 51,034,251 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Epas1
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCLAT00000013553 ⟹ ENSCLAP00000013400
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 Ensembl NW_004955441 13,244,626 - 13,328,369 (+) Ensembl
RefSeq Acc Id:
XM_005390973 ⟹ XP_005391030
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955441 13,244,626 - 13,328,220 (+) NCBI
Sequence:
CGCCGCCGCCCTGGCCGCCGCCCAAGGGCAGGCGCGGGCGGGAGGACAGCGGCGCAGTGCGCTCGTGAAGGCCCGCTCCTCGCCGCCGCCCAACCCGCACCAGGCACGCTCCGCGACGCGGAGGCCTG
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RefSeq Acc Id:
XP_005391030 ⟸ XM_005390973
- UniProtKB:
A0A8C2VEF4 (UniProtKB/TrEMBL)
- Sequence:
MTADKEKKRSSSERRKEKSRDAARCRRSKETEVFYELAHELPLPHSVSAHLDKASIMRLAISFLRTHKLLSSVCSENESEVEADQQMDNLYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTG
hide sequence
Ensembl Acc Id:
ENSCLAP00000013400 ⟸ ENSCLAT00000013553
