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Gene: Gabbr2 (gamma-aminobutyric acid type B receptor subunit 2) Chinchilla lanigera

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Symbol:

Gabbr2

Name:

gamma-aminobutyric acid type B receptor subunit 2

RGD ID:

8838365

Description:

ENCODES a protein that exhibits G protein-coupled GABA receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); neuron-glial cell signaling (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); G protein-coupled GABA receptor complex (ortholog); G protein-coupled receptor heterodimeric complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

gamma-aminobutyric acid (GABA) B receptor, 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	26,872,728 - 27,239,464 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955419	26,872,734 - 27,241,917 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Gabbr2	Chinchilla	alcohol dependence		ISO	Gabbr2 (Rattus norvegicus)	9068941	mRNA:decreased expression:hippocampus (rat)	RGD	PMID:22253714 and REF_RGD_ID:401900163
Gabbr2	Chinchilla	alcohol use disorder	susceptibility	ISO	GABBR2 (Homo sapiens)	9068941	DNA:SNP:intron: (rs2900512) (human)	RGD	PMID:28118741 and REF_RGD_ID:401940105
Gabbr2	Chinchilla	nicotine dependence	susceptibility	ISO	GABBR2 (Homo sapiens)	9068941	DNA:SNPs and haplotypes:multiple	RGD	PMID:19763258 and REF_RGD_ID:401940104

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Gabbr2	Chinchilla	autism spectrum disorder		ISO	GABBR2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism spectrum disorder	ClinVar	PMID:25741868
Gabbr2	Chinchilla	congenital disorder of glycosylation Ii		ISO	GABBR2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital disorder of glycosylation type 1I	ClinVar	PMID:20813212 and PMID:28492532
Gabbr2	Chinchilla	congenital disorder of glycosylation type II		ISO	GABBR2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: CDG Ii	ClinVar	PMID:20813212 and PMID:28492532
Gabbr2	Chinchilla	congenital myasthenic syndrome 14		ISO	GABBR2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Myasthenic syndrome more ...	ClinVar	PMID:20813212 and PMID:28492532
Gabbr2	Chinchilla	developmental and epileptic encephalopathy 59		ISO	GABBR2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Developmental and epileptic encephalopathy and 59	ClinVar	PMID:25262651 more ...
Gabbr2	Chinchilla	generalized epilepsy		ISO	GABBR2 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:16199547 more ...
Gabbr2	Chinchilla	genetic disease		ISO	GABBR2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 more ...
Gabbr2	Chinchilla	intellectual disability		ISO	GABBR2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Intellectual disability	ClinVar	PMID:25741868
Gabbr2	Chinchilla	nephronophthisis		ISO	GABBR2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Nephronophthisis	ClinVar	PMID:12872123 and PMID:28492532
Gabbr2	Chinchilla	Neurodevelopmental Disorder with Poor Language and Loss of Hand Skills		ISO	GABBR2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder with poor language and loss of hand skills	ClinVar	PMID:16199547 more ...
Gabbr2	Chinchilla	nicotine dependence		ISO	GABBR2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Tobacco addiction and susceptibility to	ClinVar	PMID:25741868 and PMID:28492532
Gabbr2	Chinchilla	Rett syndrome		ISO	GABBR2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Rett syndrome	ClinVar	PMID:25741868 more ...
Gabbr2	Chinchilla	thoracic aortic aneurysm		ISO	GABBR2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Thoracic aortic aneurysm and aortic dissection	ClinVar	PMID:20813212 and PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Gabbr2	Chinchilla	autistic disorder		ISO	GABBR2 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:19002745

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Gabbr2	Chinchilla	developmental and epileptic encephalopathy 59		ISO	GABBR2 (Homo sapiens)	7240710		OMIM
Gabbr2	Chinchilla	Neurodevelopmental Disorder with Poor Language and Loss of Hand Skills		ISO	GABBR2 (Homo sapiens)	7240710		OMIM
Gabbr2	Chinchilla	nicotine dependence		ISO	GABBR2 (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Gabbr2	Chinchilla	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway	involved_in	ISO	GABBR2 (Homo sapiens)	9068941	PMID:987231	ComplexPortal	PMID:987231
Gabbr2	Chinchilla	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway	involved_in	ISO	Gabbr2 (Rattus norvegicus)	9068941	PMID:15147298	ComplexPortal	PMID:15147298 and REF_RGD_ID:2315493
Gabbr2	Chinchilla	gamma-aminobutyric acid signaling pathway		ISO	Gabbr2 (Rattus norvegicus)	9068941		RGD	PMID:11389174 and REF_RGD_ID:632824
Gabbr2	Chinchilla	gamma-aminobutyric acid signaling pathway	involved_in	ISO	Gabbr2 (Rattus norvegicus)	9068941	PMID:15147298	ComplexPortal	PMID:15147298 and REF_RGD_ID:2315493
Gabbr2	Chinchilla	gamma-aminobutyric acid signaling pathway	involved_in	ISO	GABBR2 (Homo sapiens)	9068941	PMID:987231 and PMID:9872316	UniProt	PMID:987231 and PMID:9872316
Gabbr2	Chinchilla	neuron-glial cell signaling	involved_in	ISO	UniProtKB:Q9Z0U4	9068941	PMID:10196584	ARUK-UCL	PMID:10196584 and REF_RGD_ID:14397583

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Gabbr2	Chinchilla	cytoplasm	located_in	ISO	Gabbr2 (Mus musculus)	9068941	PMID:15013631	MGI	PMID:15013631
Gabbr2	Chinchilla	G protein-coupled GABA receptor complex	part_of	ISO	GABBR2 (Homo sapiens)	9068941	PMID:24305054	ComplexPortal	PMID:24305054
Gabbr2	Chinchilla	G protein-coupled GABA receptor complex	part_of	ISO	Gabbr2 (Rattus norvegicus)	9068941	PMID:21063387	ComplexPortal	PMID:21063387 and REF_RGD_ID:8553604
Gabbr2	Chinchilla	G protein-coupled receptor heterodimeric complex	part_of	ISO	UniProtKB:Q9UBS5	9068941	PMID:9872316	UniProt	PMID:9872316
Gabbr2	Chinchilla	GABA receptor complex	part_of	ISO	GABBR2 (Homo sapiens)	9068941	PMID:15304491	CAFA	PMID:15304491
Gabbr2	Chinchilla	GABA-ergic synapse	is_active_in	ISO	Gabbr2 (Rattus norvegicus)	9068941	PMID:14657159	SynGO	PMID:14657159 and REF_RGD_ID:13702400
Gabbr2	Chinchilla	glutamatergic synapse	is_active_in	ISO	Gabbr2 (Rattus norvegicus)	9068941	PMID:14657159	SynGO	PMID:14657159 and REF_RGD_ID:13702400
Gabbr2	Chinchilla	neuron projection	located_in	ISO	Gabbr2 (Mus musculus)	9068941	PMID:15013631	MGI	PMID:15013631
Gabbr2	Chinchilla	plasma membrane	located_in	ISO	GABBR2 (Homo sapiens)	9068941	PMID:15304491 and PMID:9872316	CAFA	PMID:15304491 and PMID:9872316
Gabbr2	Chinchilla	postsynaptic membrane	is_active_in	ISO	Gabbr2 (Rattus norvegicus)	9068941	PMID:14657159	SynGO	PMID:14657159 and REF_RGD_ID:13702400
Gabbr2	Chinchilla	presynaptic membrane	is_active_in	ISO	Gabbr2 (Rattus norvegicus)	9068941	PMID:14657159	SynGO	PMID:14657159 and REF_RGD_ID:13702400

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Gabbr2	Chinchilla	G protein-coupled GABA receptor activity		ISO	Gabbr2 (Rattus norvegicus)	9068941		RGD	PMID:11389174 and REF_RGD_ID:632824
Gabbr2	Chinchilla	G protein-coupled GABA receptor activity	contributes_to	ISO	GABBR2 (Homo sapiens)	9068941	PMID:9872316	UniProtKB	PMID:9872316
Gabbr2	Chinchilla	protein binding	enables	ISO	PR:Q06507	9068941	PMID:15013631	MGI	PMID:15013631
Gabbr2	Chinchilla	protein binding	enables	ISO	UniProtKB:P46459 and UniProtKB:Q9UBS5	9068941	PMID:16724110	IntAct	PMID:16724110
Gabbr2	Chinchilla	protein binding	enables	ISO	UniProtKB:Q9UBS5	9068941	PMID:24658140 and PMID:32555460	IntAct	PMID:24658140 and PMID:32555460
Gabbr2	Chinchilla	protein binding	enables	ISO	UniProtKB:Q86UR5	9068941	PMID:37207277	IntAct	PMID:37207277
Gabbr2	Chinchilla	protein binding	enables	ISO	UniProtKB:Q9UBS5-2	9068941	PMID:24305054 more ...	IntAct	PMID:24305054 more ...
Gabbr2	Chinchilla	protein binding	enables	ISO	UniProtKB:Q9Z0U4	9068941	PMID:21552208	IntAct	PMID:21552208 and REF_RGD_ID:8554334
Gabbr2	Chinchilla	protein binding	enables	ISO	UniProtKB:P27732	9068941	PMID:20627102	IntAct	PMID:20627102 and REF_RGD_ID:8554172
Gabbr2	Chinchilla	protein binding	enables	ISO	UniProtKB:Q9Z0U4	9068941	PMID:21063387	IntAct	PMID:21063387 and REF_RGD_ID:8553604
Gabbr2	Chinchilla	protein binding	enables	ISO	UniProtKB:Q9Z0U4	9068941	PMID:19590495	IntAct	PMID:19590495 and REF_RGD_ID:8553550
Gabbr2	Chinchilla	protein heterodimerization activity	enables	ISO	UniProtKB:Q9Z0U4	9068941	PMID:15304491	CAFA	PMID:15304491

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

PMID:22301074	PMID:30032202

Gabbr2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	26,872,728 - 27,239,464 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955419	26,872,734 - 27,241,917 (+)	NCBI	ChiLan1.0	ChiLan1.0

GABBR2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	98,288,109 - 98,708,935 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	98,288,109 - 98,708,935 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	101,050,391 - 101,471,217 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	100,090,187 - 100,511,300 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	98,129,920 - 98,551,034	NCBI
Celera	9	71,564,671 - 71,985,374 (-)	NCBI		Celera
Cytogenetic Map	9	q22.33	NCBI
HuRef	9	70,650,446 - 70,940,183 (-)	NCBI		HuRef
CHM1_1	9	101,196,866 - 101,617,897 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	110,460,053 - 110,880,595 (-)	NCBI		T2T-CHM13v2.0

Gabbr2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	46,662,318 - 46,991,714 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	46,662,305 - 46,991,873 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	46,662,318 - 46,991,714 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	46,662,305 - 46,991,873 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	46,676,770 - 47,004,586 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	46,684,998 - 47,012,814 (-)	NCBI		MGSCv36	mm8
Celera	4	46,675,526 - 47,003,236 (-)	NCBI		Celera
Cytogenetic Map	4	B1	NCBI
cM Map	4	25.18	NCBI

Gabbr2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	65,743,073 - 66,083,695 (-)	NCBI		GRCr8
mRatBN7.2	5	60,947,517 - 61,288,104 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	60,947,526 - 61,288,104 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	62,918,639 - 63,259,788 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	64,738,005 - 65,079,085 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	64,707,402 - 65,048,578 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	62,276,100 - 62,621,737 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	62,276,100 - 62,621,737 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	66,802,348 - 67,142,203 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	63,241,397 - 63,611,907 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	63,241,575 - 63,612,086 (-)	NCBI
Celera	5	59,508,888 - 59,731,378 (-)	NCBI		Celera
Cytogenetic Map	5	q22	NCBI

GABBR2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	40,747,751 - 41,170,503 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	40,750,129 - 41,172,879 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	69,377,091 - 69,799,867 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	97,500,606 - 97,919,053 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	97,500,904 - 97,790,605 (-)	Ensembl	panpan1.1		panPan2

GABBR2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	55,469,327 - 55,817,930 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	55,470,197 - 55,817,945 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	53,902,316 - 54,251,118 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	56,578,376 - 56,927,274 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	56,580,523 - 56,927,865 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	55,076,468 - 55,431,616 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	55,107,840 - 55,455,961 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	55,804,321 - 56,153,068 (-)	NCBI		UU_Cfam_GSD_1.0

Gabbr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	170,397,327 - 170,750,253 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936524	6,943,147 - 7,297,835 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936524	6,944,923 - 7,297,833 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GABBR2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	240,107,466 - 240,496,101 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	240,107,469 - 240,495,917 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	268,546,934 - 268,740,787 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GABBR2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	40,719,126 - 41,135,602 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	40,719,577 - 41,135,770 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	37,753,365 - 38,173,474 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gabbr2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624825	2,233,759 - 2,610,255 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624825	2,233,759 - 2,608,159 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005382826	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01020418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01020419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01020420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01020421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01020422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01020423	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01020424	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01020425	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01020426	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01020427	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01061078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000015582 ⟹ ENSCLAP00000015421

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955419	26,872,728 - 27,239,464 (+)	Ensembl

RefSeq Acc Id:

XM_005382826 ⟹ XP_005382883

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955419	26,872,734 - 27,241,917 (+)	NCBI

Sequence:

show sequence

CCGGGGCCTGGGGCTGGGCGCGGGGTGCCCCCCGGCCGCCGCCCAGCAGCCCACCGCTCTCCATCATGGGCCTCATGCCGCTCACCAAGGAGGTGGCCAAGGGCAGCATCGGCCGCGGCGTGCTCCCC
GCCGTGGAGCTGGCCATCGAGCAGATCCGCAACGAGTCACTCCTGCGCCCCTACTTCCTCGACCTGCGGCTCTACGACACCGAGTGTGACAACGCAAAAGGTCTGAAAGCCTTCTACGATGCAATAAA
ATATGGGCCGAACCATTTGATGGTGTTTGGAGGCGTCTGTCCATCTGTCACATCCATCATTGCTGAGTCCCTCCAAGGCTGGAACCTGGTGCAGCTTTCCTTTGCTGCAACTACTCCTGTTCTAGCCG
ATAAGAAAAAGTATCCATATTTTTTCCGGACGGTGCCCTCGGACAACGCAGTGAATCCAGCCATCCTGAAGTTGCTGAAGCACTACCGCTGGCGGCGCGTGGGCACGCTCACACAGGACGTGCAGCGC
TTCTCTGAGGTGAGGAACGACCTGACTGGGGTTCTATATGGTGAGGACATCGAGATTTCAGACACTGAGAGCTTCTCCAATGATCCCTGCACCAGTGTCAAAAAGCTCAAGGGGAATGATGTGAGGAT
CATCCTTGGCCAGTTTGACCAGAACATGGCGGCAAAAGTGTTCTGTTGTGCCTATGAGGAGAACATGTTTGGCAGCAAATACCAGTGGATCATCCCCGGCTGGTACGAGCCCTCCTGGTGGGAGCAGG
TGCGCACCGAGGCCAACTCCTCCCACTGCCTGCAGAAGAACCTGCTGGCGGCCATGGAGGGCTACATCGGTGTGGACTTCGAGCCGCTGAGCTCCAAACAGATTAAGACCATCTCGGGAAAGACCCCA
CAGCAGTACGAGAGAGAGTACAACAGCAAGCGGTCGGGCGTGGGGCCCAGCAAGTTTCATGGTTATGCTTACGACGGCATCTGGGTCATCGCCAAGACACTACAGAGGGCCATGGAGACACTGCACGC
CAGCAGCCGGCACCAGCGCATCCAGGACTTCAACTACACCGACCACACCCTGGGCAGGATCATCCTCAGCGCCATGAATGAGACCAACTTCTTCGGGGTCACGGGTCAAGTTGTGTTCCGGAACGGGG
AGAGAATGGGGACCATTAAATTTACTCAATTTCAAGACAGCAGGGAAGTGAAGGTGGGAGAGTACAATGCTGTGGCTGACACACTGGAAATCATCAACGACACCATCAGGTTCCAAGGATCCGAACCT
CCAAAGGACAAGACCATCATCCTGGAGCAGCTGCGGAAGATCTCCCTACCTCTCTACAGCATTCTCTCTGCCCTCACCATCCTCGGCATGATCATGGCCAGTGCTTTTCTCTTCTTCAACATCAAGAA
TCGGAACCAGAAGCTCATAAAGATGTCAAGTCCCTATATGAACAATCTTATAATCCTTGGAGGAATGCTGTCCTATGCATCTATATTTCTCTTTGGCCTCGATGGATCCTTTGTCTCAGAAAAGACGT
TTGAAACACTTTGCACTGTCAGGACCTGGATCCTCACGGTGGGCTACACAACCGCCTTTGGGGCTATGTTTGCAAAGACATGGAGAGTCCACGCCATCTTTAAAAATGTGAAAATGAAGAAGAAGATC
ATCAAGGACCAGAAGCTGCTTGTGATCGTGGGGGGCATGCTACTGATTGACCTATGCATCCTGATCTGCTGGCAAGCTGTGGACCCCCTGCGAAGGACGGTGGAGAGGTACAGCATGGAGCCGGACCC
AGCAGGCCGGGATATCTCCATCCGCCCACTCCTGGAGCACTGTGAGAACACCCACATGACCATCTGGCTCGGCATCGTCTACGCCTACAAGGGGCTGCTCATGTTGTTCGGTTGTTTCTTAGCTTGGG
AGACCCGTAACGTCAGCATCCCTGCACTCAATGACAGCAAGTACATTGGGATGAGCGTCTACAATGTGGGGATCATGTGCATCATTGGAGCCGCTGTCTCCTTCCTGACCCGGGACCAGCCCAATGTG
CAGTTCTGCATCGTGGCCCTGGTCATCATCTTCTGCAGCACCATCACTCTCTGCCTGGTGTTTGTGCCAAAGCTCATCACTTTGAGAACAAACCCAGATGCCGCAACTCAGAACAAGCGACTCCAGAT
CACTCGAAATCAGAAGAAAGAAGATTCAAAAACATCCACCTCCGTCACCAGCGTGAACCAGGCAAGCACGTCCCGCCTGGAGGGTCTGCAGTCAGAAAACCATCGCTTGAGGATGAAGATCACAGAGT
TGGATAAGGACTTGGAAGAAGTCACTATGAAGCTGCAGGACACACCAGAAAAGACCACCTACATTAAACAGAACCACTACCAGGAGCTCAACGACATCCTCAACCTGGGGAACTTCACAGAGAGCACA
GATGGGGGAAAGGCCATTTTAAAAAATCACCTCGATCAAAATCCCCAGCTACAGTGGAATACAACAGAGCCCTCTCGAACATGCAAAGATCCCATAGAAGATATTAACTCCCCAGAACACATCCAGCG
CCGGCTGTCCCTACAGCTCCCCATCCTGCACCACGCCTACCTCCCATCCATTGGTGGCGTGGACGCCAGCTGTGTCAGCCCCTGCGTGAGCCCCACCGCCAGCCCCCGCCACAGACATGTGCCACCCT
CCTTCCGAGTCATGGTCTCGGGCCTGTAAAAGTGGGAGGCCTGGGGCCAGGGCCTCCCCGCAACGGCACCATGCTGGGCAGAGACGTCTGCTGCAGGCACTGTTGGCTCCGGCCACGGAGAACCTGGG
CACCGCGGCTGCCTCTCAGGACTGCTCAGATGGCACTGGGTGGACAGGATGGGGAACTTGGCCCCTGACCTCGAGCCTTATTTGTGAAGTTCTTATTCTTTCACAAAGAAGAGGAATGGAAATGACTT
CTTCCTGAATGTCTGCAAACAAGGAAGAGCTGGGATATTTGAAACTAGCAAAAAACCAACAAAAAGTTCTCGACAAGGAGAGAGGCCTAAAGCTCCAGCTAGACTCCCCGAGTGACCCTGAGGAGCCT
CAGGAAGAGGCAAGGGCTCTGGAGAAACTGCCTCTGCACTCTGCACACACATCACAGGCTGTGGTCCCCGCCAGCCCTTCTGTACTCTGGGGGAGGAGGTGAGCAGGGCTGCCAGGTCCCCAGGGGCC
AGCCCAGCACCCCCAGCCTCCCTGGAACAGGGAGTCCGCAGGACTGGTGGACGGGCGCAGCCCTGCACTGGGGCCCCCAAGCAGGCGGACTCGCATGCTCCCAGGGGACCTCTGTCACCTGAATGAGA
TGTTTGTTATTCTCTGATAAATGCCACACATTAACACAATAACACCCGATCCGGGGACTGTGGGGATTTAGGGCACGTCACCGCAGACATGCTCTGCGGCGTTCACCGACAGTCTGTCATGCACCCGC
CGTGTTGGCCATGTCCTTGTGTTCATATGGAGTGTTCCCAGTAATAAGGGGGACCACCGAGCTAACCACAGAACATCTGTTCCCAGCAAACATGAGAAAGAAAGATTGTGCACTTTAACTGTTCCCAT
CAGGGCCCAAGGGCTGGCTGGGATTTTTTTTTCTTTTAATTTTTTTTTATTTTTGTTGCCACTGACTTTGTTTCTGACCAAAGTGAATTGGGGGCATTCTGCTAAAAGACATCCTGGTGTCTTAGGGG
AGGGAGTTGCTGGCTGAGGGCTTCCCTTGCCTTCCAGAGCAACCCTCCATCCAGAGGAGCCTGTGAGCTCTCTCCCCTGGGGGGTCACAGAGGCCATCAGTCTGCCACTGATCCTCACTCATAATATA
ACTGCTCTTTTTTAATTGAACCCCAAAGAGCACCGGCCCTGGAGTCAGAGAGATCTGGGTTCAGTTCCCCTCCAGCTCCCTATGTGACCTTGGGCAAGTCACTCGTGTCTCTTTAAGCCTCAGTTTCC
CCTCTGTAACAGATTGGGGTTGAAATAACACCCATCCTGCCTACCTCACAGGATCACTCTGAGGATTGAAACTTGATCTCATGCTGGAAAGCTTTGTCCCATACAGTGAAGCAGCCCTGACCCATGAG
GTATTAGTGTGACAATGAACTTCGGCCCTCACTACAGCCTGGGCGTGTGGCCCAGAGAAGCTTCCAGCACAGCCCTCCCCCAGGAACCGCTGGGCTGGAGGAGGCTCCCAATGACTTTTCTGACATTC
CTAGACAGGTTCATTCTTTGCTAAAGAGAGGCCTGAATGACAACGTCCAGGACATCTGCACAACTGAGCAGTTCGCTCGCTCCCTAAAGAATCCTAATGGCAGCTTCAACAGGCAGGCAATAATCTCT
TCCCAGAACCACTGCAGTCAGGAGTACACTGTTGTCACCACCAGGCTTTGATGAAAGGGCCCATGGGAATCACCATCGCCAACATTTCAAAACACCCGAGTTCACGTAGCATAGCATTCCCCTCCCCT
CCTTCAAGAGAGGTTCTGGAGGTACTGTAGCTTTTAGGGGAAAAAAAAATGTTAACACATCACAAGTCATGTTGAAGTCATTCTCTGTTTAGGCACTAAAAATTGTGTTGTCACTCAGTGTGTATTAC
CAGTATTTCCTTGCTTTCTTGATTTCACCAAAACCAAATTTAATTTAAAGGATCACATTAATTTTTCAAAGGGAAAGAGAATTAATTGTACATAATGTATACACACACAAAAATACCTGTAGAAATAT
TATTCCAACATAGCAGGAAAACAAACAAACAAAAGTATTGGACTGTCGGAGGTGAGCGTGCGTCTGTAACCCTTTGTGACTCCAAAACGTGCTCCGTCTTCTAGGTTAACCCACAAAATACATTCTGT
CTTACTGATCCTGTAGGCTCACCCATTTTGTTCTTTAATTTCCCCGCAAATAACAAGACCCACAGAAGTGACTCTAGCTATTTAATGGTTCTGTTCTTTTATATGCAACAACCACACCGTCCATTTCC
AAGAGGCTTCGGCCTGAAGGCATTTTCCAATGATGTTAGTGCACAACGCTTTAAATTAGACTGGAACTGCCAGAATCAAATGTAAATGAGGAATTTCTCGTTCCCCTACTGCATGGTATCAATTTTTA
ATAAATTGTTGCAAATTTGTTTTTATGAATAAAAGAAAAAAACTCTCGTC

hide sequence


Protein RefSeqs	XP_005382883	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000015421
	ENSCLAP00000015421.1

RefSeq Acc Id:

XP_005382883 ⟸ XM_005382826

- UniProtKB:

A0A8C2YQA9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGLMPLTKEVAKGSIGRGVLPAVELAIEQIRNESLLRPYFLDLRLYDTECDNAKGLKAFYDAIKYGPNHLMVFGGVCPSVTSIIAESLQGWNLVQLSFAATTPVLADKKKYPYFFRTVPSDNAVNPAI
LKLLKHYRWRRVGTLTQDVQRFSEVRNDLTGVLYGEDIEISDTESFSNDPCTSVKKLKGNDVRIILGQFDQNMAAKVFCCAYEENMFGSKYQWIIPGWYEPSWWEQVRTEANSSHCLQKNLLAAMEGY
IGVDFEPLSSKQIKTISGKTPQQYEREYNSKRSGVGPSKFHGYAYDGIWVIAKTLQRAMETLHASSRHQRIQDFNYTDHTLGRIILSAMNETNFFGVTGQVVFRNGERMGTIKFTQFQDSREVKVGEY
NAVADTLEIINDTIRFQGSEPPKDKTIILEQLRKISLPLYSILSALTILGMIMASAFLFFNIKNRNQKLIKMSSPYMNNLIILGGMLSYASIFLFGLDGSFVSEKTFETLCTVRTWILTVGYTTAFGA
MFAKTWRVHAIFKNVKMKKKIIKDQKLLVIVGGMLLIDLCILICWQAVDPLRRTVERYSMEPDPAGRDISIRPLLEHCENTHMTIWLGIVYAYKGLLMLFGCFLAWETRNVSIPALNDSKYIGMSVYN
VGIMCIIGAAVSFLTRDQPNVQFCIVALVIIFCSTITLCLVFVPKLITLRTNPDAATQNKRLQITRNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMKLQDTPEKTTYI
KQNHYQELNDILNLGNFTESTDGGKAILKNHLDQNPQLQWNTTEPSRTCKDPIEDINSPEHIQRRLSLQLPILHHAYLPSIGGVDASCVSPCVSPTASPRHRHVPPSFRVMVSGL

hide sequence

Ensembl Acc Id:

ENSCLAP00000015421 ⟸ ENSCLAT00000015582

Protein Domains

G-protein coupled receptors family 3 profile

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000010613	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000015582	ENTREZGENE
	ENSCLAT00000015582.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.2300	UniProtKB/TrEMBL
InterPro	ANF_lig-bd_rcpt	UniProtKB/TrEMBL
	GBR2_CC	UniProtKB/TrEMBL
	GPCR3_GABA-B	UniProtKB/TrEMBL
	GPCR_3	UniProtKB/TrEMBL
	GPCR_3_C	UniProtKB/TrEMBL
	GPCR_3_CS	UniProtKB/TrEMBL
	GPCR_3_GABA_rcpt_B2	UniProtKB/TrEMBL
	Peripla_BP_I	UniProtKB/TrEMBL
NCBI Gene	Gabbr2	ENTREZGENE
PANTHER	GAMMA-AMINOBUTYRIC ACID TYPE B RECEPTOR SUBUNIT 2	UniProtKB/TrEMBL
	PTHR10519	UniProtKB/TrEMBL
Pfam	7tm_3	UniProtKB/TrEMBL
	ANF_receptor	UniProtKB/TrEMBL
	GBR2_CC	UniProtKB/TrEMBL
PRINTS	GABAB2RECPTR	UniProtKB/TrEMBL
	GABABRECEPTR	UniProtKB/TrEMBL
	GPCRMGR	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F3_3	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F3_4	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53822	UniProtKB/TrEMBL
UniProt	A0A8C2YQA9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Gabbr2	gamma-aminobutyric acid type B receptor subunit 2		gamma-aminobutyric acid (GABA) B receptor, 2	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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