Slc25a32 (solute carrier family 25 member 32) - Rat Genome Database

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Gene: Slc25a32 (solute carrier family 25 member 32) Chinchilla lanigera
Analyze
Symbol: Slc25a32
Name: solute carrier family 25 member 32
RGD ID: 8822132
Description: ENCODES a protein that exhibits FAD transmembrane transporter activity (ortholog); folic acid transmembrane transporter activity (ortholog); INVOLVED IN folate import into mitochondrion (ortholog); mitochondrial FAD transmembrane transport (ortholog); PARTICIPATES IN folate cycle metabolic pathway; ASSOCIATED WITH Cohen syndrome (ortholog); Exercise Intolerance (ortholog); prostate cancer (ortholog); FOUND IN mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mitochondrial folate transporter/carrier; solute carrier family 25 (mitochondrial folate carrier), member 32
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541727,527,144 - 27,546,043 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541727,530,806 - 27,545,103 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Slc25a32
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541727,527,144 - 27,546,043 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541727,530,806 - 27,545,103 (-)NCBIChiLan1.0ChiLan1.0
SLC25A32
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388103,398,638 - 103,415,107 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8103,398,635 - 103,415,189 (-)EnsemblGRCh38hg38GRCh38
GRCh378104,410,866 - 104,427,335 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368104,480,042 - 104,496,447 (-)NCBINCBI36Build 36hg18NCBI36
Celera8100,597,407 - 100,614,007 (-)NCBICelera
Cytogenetic Map8q22.3NCBI
HuRef899,611,217 - 99,627,912 (-)NCBIHuRef
CHM1_18104,451,666 - 104,468,362 (-)NCBICHM1_1
T2T-CHM13v2.08104,526,288 - 104,542,756 (-)NCBIT2T-CHM13v2.0
Slc25a32
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391538,954,625 - 38,976,213 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1538,954,626 - 38,976,111 (-)EnsemblGRCm39 Ensembl
GRCm381539,091,230 - 39,112,720 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1539,091,231 - 39,112,716 (-)EnsemblGRCm38mm10GRCm38
MGSCv371538,925,737 - 38,944,262 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361538,924,354 - 38,942,718 (-)NCBIMGSCv36mm8
Celera1539,580,990 - 39,600,127 (-)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1515.39NCBI
Slc25a32
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8772,024,535 - 72,045,692 (-)NCBIGRCr8
mRatBN7.2770,142,958 - 70,160,726 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl770,142,964 - 70,160,770 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx772,017,303 - 72,033,881 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0774,219,879 - 74,236,394 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0774,087,902 - 74,104,480 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0777,983,885 - 78,005,058 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl777,987,212 - 78,004,975 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0778,244,446 - 78,265,340 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4774,650,541 - 74,668,358 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera767,199,377 - 67,217,144 (-)NCBICelera
Cytogenetic Map7q31NCBI
SLC25A32
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27120,764,840 - 120,781,456 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1896,301,065 - 96,317,356 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08100,054,560 - 100,071,016 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18102,210,068 - 102,226,732 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8102,210,068 - 102,226,732 (-)Ensemblpanpan1.1panPan2
SLC25A32
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1134,821,065 - 4,835,113 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl134,648,759 - 4,835,023 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha134,822,424 - 4,838,633 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0134,982,954 - 4,999,194 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl134,985,138 - 4,999,147 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1134,823,284 - 4,839,496 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0134,941,238 - 4,957,413 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0134,953,984 - 4,970,198 (-)NCBIUU_Cfam_GSD_1.0
Slc25a32
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530332,931,025 - 32,944,415 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647040,357,446 - 40,370,514 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647040,357,066 - 40,370,514 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A32
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl433,704,771 - 33,730,130 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1433,704,810 - 33,727,796 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2436,477,318 - 36,499,720 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A32
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1898,256,793 - 98,271,347 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl898,254,852 - 98,271,514 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603942,330,381 - 42,346,408 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a32
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476319,933,107 - 19,955,040 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476319,934,120 - 19,955,317 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Ensembl Acc Id: ENSCLAT00000008622   ⟹   ENSCLAP00000008495
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541727,527,144 - 27,546,043 (-)Ensembl
RefSeq Acc Id: XM_013512707   ⟹   XP_013368161
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541727,530,806 - 27,545,103 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013368161 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000008495.1
RefSeq Acc Id: XP_013368161   ⟸   XM_013512707
- Sequence:
Ensembl Acc Id: ENSCLAP00000008495   ⟸   ENSCLAT00000008622


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000005938 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000008622.1 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/TrEMBL
InterPro Mit_carrier UniProtKB/TrEMBL
  Mitochondrial_sb/sol_carrier UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/TrEMBL
  SLC25A32-like UniProtKB/TrEMBL
NCBI Gene Slc25a32 ENTREZGENE
PANTHER MITOCHONDRIAL FOLATE TRANSPORTER/CARRIER UniProtKB/TrEMBL
  PTHR45683 UniProtKB/TrEMBL
Pfam Mito_carr UniProtKB/TrEMBL
PRINTS MTUNCOUPLING UniProtKB/TrEMBL
PROSITE SOLCAR UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/TrEMBL
UniProt A0A8C2V121_CHILA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Slc25a32  solute carrier family 25 member 32    solute carrier family 25 (mitochondrial folate carrier), member 32  Symbol and/or name change 5135510 APPROVED