Slc25a32 (solute carrier family 25 member 32) - Rat Genome Database

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Gene: Slc25a32 (solute carrier family 25 member 32) Ictidomys tridecemlineatus
Analyze
Symbol: Slc25a32
Name: solute carrier family 25 member 32
RGD ID: 12651996
Description: ENCODES a protein that exhibits FAD transmembrane transporter activity (inferred); INVOLVED IN mitochondrial FAD transmembrane transport (inferred); nucleotide transport (inferred); transmembrane transport (inferred); PARTICIPATES IN folate cycle metabolic pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Exercise Intolerance (ortholog); hepatocellular carcinoma (ortholog); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mitochondrial folate transporter/carrier
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mIctTri1.hap1 - mIctTri1.hap1 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap1732,950,387 - 32,974,798 (+)NCBImIctTri1.hap1
HiC_Itri_2NW_02440530332,931,025 - 32,944,415 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647040,357,446 - 40,370,514 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647040,357,066 - 40,370,514 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0



Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Slc25a32
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap1732,950,387 - 32,974,798 (+)NCBImIctTri1.hap1
HiC_Itri_2NW_02440530332,931,025 - 32,944,415 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647040,357,446 - 40,370,514 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647040,357,066 - 40,370,514 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A32
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388103,398,638 - 103,415,107 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8103,398,635 - 103,415,189 (-)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh378104,410,866 - 104,427,335 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368104,480,042 - 104,496,447 (-)NCBIBuild 36Build 36hg18NCBI36
Celera8100,597,407 - 100,614,007 (-)NCBICelera
Cytogenetic Map8q22.3NCBI
HuRef899,611,217 - 99,627,912 (-)NCBIHuRef
CHM1_18104,451,666 - 104,468,362 (-)NCBICHM1_1
T2T-CHM13v2.08104,526,288 - 104,542,756 (-)NCBIT2T-CHM13v2.0
Slc25a32
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391538,954,625 - 38,976,213 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1538,954,620 - 38,976,159 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381539,091,230 - 39,112,720 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1539,091,231 - 39,112,716 (-)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv371538,925,737 - 38,944,262 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361538,924,354 - 38,942,718 (-)NCBIMGSCv36mm8
Celera1539,580,990 - 39,600,127 (-)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1515.39NCBI
Slc25a32
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8772,024,535 - 72,045,692 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl772,007,975 - 72,045,647 (-)EnsemblGRCr8
mRatBN7.2770,142,958 - 70,160,726 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl770,142,964 - 70,160,770 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx772,017,303 - 72,033,881 (-)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0774,219,879 - 74,236,394 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0774,087,902 - 74,104,480 (-)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd774,055,885 - 74,073,652 (-)NCBI
Lyon_Normotensive774,913,429 - 74,931,196 (-)NCBI
Lyon_Hypertensive775,052,513 - 75,070,280 (-)NCBI
F344_StmMcwi773,674,568 - 73,690,415 (-)NCBI
Rnor_6.0777,983,885 - 78,005,058 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl777,987,212 - 78,004,975 (-)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.0778,244,446 - 78,265,340 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4774,650,541 - 74,668,358 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera767,199,377 - 67,217,144 (-)NCBICelera
Cytogenetic Map7q31NCBI
Slc25a32
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541727,527,144 - 27,546,043 (-)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_00495541727,530,806 - 27,545,103 (-)NCBIChiLan1.0ChiLan1.0
SLC25A32
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27120,764,840 - 120,781,456 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1896,301,065 - 96,317,356 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08100,054,560 - 100,071,016 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18102,210,068 - 102,226,732 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8102,210,068 - 102,226,732 (-)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
SLC25A32
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1134,821,065 - 4,835,113 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl134,648,759 - 4,835,023 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha134,822,424 - 4,838,633 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0134,982,954 - 4,999,194 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl134,985,138 - 4,999,147 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1134,823,284 - 4,839,496 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0134,941,238 - 4,957,413 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0134,953,984 - 4,970,198 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
SLC25A32
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl433,704,771 - 33,730,130 (+)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.1433,704,810 - 33,727,796 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2436,477,318 - 36,499,720 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A32
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap18107,187,254 - 107,203,078 (-)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_02366603942,330,381 - 42,346,408 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.1898,256,793 - 98,271,347 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl898,254,852 - 98,271,514 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Slc25a32
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476319,934,120 - 19,955,317 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_00462476319,933,107 - 19,955,040 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Slc25a32
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11212,066,972 - 212,082,641 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSSTOT00000007987   ⟹   ENSSTOP00000007148
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493647040,357,446 - 40,370,514 (+)Ensembl
RefSeq Acc Id: XM_078016831   ⟹   XP_077872957
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
mIctTri1.hap1732,950,387 - 32,974,798 (+)NCBI
RefSeq Acc Id: XM_078016832   ⟹   XP_077872958
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
mIctTri1.hap1732,950,387 - 32,969,285 (+)NCBI
Protein Sequences
Protein RefSeqs XP_077872957 (Get FASTA)   NCBI Sequence Viewer  
  XP_077872958 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000007148.3
Ensembl Acc Id: ENSSTOP00000007148   ⟸   ENSSTOT00000007987
RefSeq Acc Id: XP_077872957   ⟸   XM_078016831
- Peptide Label: isoform X1
- UniProtKB: I3MAT2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_077872958   ⟸   XM_078016832
- Peptide Label: isoform X2
- UniProtKB: I3MAT2 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000007983 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000007987.3 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/TrEMBL
InterPro Mitochondrial_sb/sol_carrier UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/TrEMBL
  SLC25A32-like UniProtKB/TrEMBL
NCBI Gene Slc25a32 ENTREZGENE
PANTHER PTHR45683 UniProtKB/TrEMBL
Pfam Mito_carr UniProtKB/TrEMBL
PROSITE SOLCAR UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/TrEMBL
UniProt I3MAT2 ENTREZGENE, UniProtKB/TrEMBL