SLC25A32 (solute carrier family 25 member 32) - Rat Genome Database

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Gene: SLC25A32 (solute carrier family 25 member 32) Chlorocebus sabaeus
Analyze
Symbol: SLC25A32
Name: solute carrier family 25 member 32
RGD ID: 18669481
Description: ENCODES a protein that exhibits FAD transmembrane transporter activity (inferred); folic acid transmembrane transporter activity (inferred); nucleotide transmembrane transporter activity (inferred); INVOLVED IN folate import into mitochondrion (inferred); mitochondrial FAD transmembrane transport (inferred); nucleotide transport (inferred); PARTICIPATES IN folate cycle metabolic pathway; ASSOCIATED WITH Cohen syndrome (ortholog); Exercise Intolerance (ortholog); genetic disease (ortholog); FOUND IN membrane (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mitochondrial folate transporter/carrier
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1898,256,793 - 98,271,347 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl898,254,852 - 98,271,514 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603942,330,381 - 42,346,408 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)
mitochondrion  (IEA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SLC25A32
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1898,256,793 - 98,271,347 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl898,254,852 - 98,271,514 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603942,330,381 - 42,346,408 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
SLC25A32
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388103,398,638 - 103,415,107 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8103,398,635 - 103,415,189 (-)EnsemblGRCh38hg38GRCh38
GRCh378104,410,866 - 104,427,335 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368104,480,042 - 104,496,447 (-)NCBINCBI36Build 36hg18NCBI36
Celera8100,597,407 - 100,614,007 (-)NCBICelera
Cytogenetic Map8q22.3NCBI
HuRef899,611,217 - 99,627,912 (-)NCBIHuRef
CHM1_18104,451,666 - 104,468,362 (-)NCBICHM1_1
T2T-CHM13v2.08104,526,288 - 104,542,756 (-)NCBIT2T-CHM13v2.0
Slc25a32
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391538,954,625 - 38,976,213 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1538,954,626 - 38,976,111 (-)EnsemblGRCm39 Ensembl
GRCm381539,091,230 - 39,112,720 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1539,091,231 - 39,112,716 (-)EnsemblGRCm38mm10GRCm38
MGSCv371538,925,737 - 38,944,262 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361538,924,354 - 38,942,718 (-)NCBIMGSCv36mm8
Celera1539,580,990 - 39,600,127 (-)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1515.39NCBI
Slc25a32
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8772,024,535 - 72,045,692 (-)NCBIGRCr8
mRatBN7.2770,142,958 - 70,160,726 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl770,142,964 - 70,160,770 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx772,017,303 - 72,033,881 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0774,219,879 - 74,236,394 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0774,087,902 - 74,104,480 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0777,983,885 - 78,005,058 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl777,987,212 - 78,004,975 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0778,244,446 - 78,265,340 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4774,650,541 - 74,668,358 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera767,199,377 - 67,217,144 (-)NCBICelera
Cytogenetic Map7q31NCBI
Slc25a32
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541727,527,144 - 27,546,043 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541727,530,806 - 27,545,103 (-)NCBIChiLan1.0ChiLan1.0
SLC25A32
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27120,764,840 - 120,781,456 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1896,301,065 - 96,317,356 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08100,054,560 - 100,071,016 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18102,210,068 - 102,226,732 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8102,210,068 - 102,226,732 (-)Ensemblpanpan1.1panPan2
SLC25A32
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1134,821,065 - 4,835,113 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl134,648,759 - 4,835,023 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha134,822,424 - 4,838,633 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0134,982,954 - 4,999,194 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl134,985,138 - 4,999,147 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1134,823,284 - 4,839,496 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0134,941,238 - 4,957,413 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0134,953,984 - 4,970,198 (-)NCBIUU_Cfam_GSD_1.0
Slc25a32
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530332,931,025 - 32,944,415 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647040,357,446 - 40,370,514 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647040,357,066 - 40,370,514 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A32
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl433,704,771 - 33,730,130 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1433,704,810 - 33,727,796 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2436,477,318 - 36,499,720 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Slc25a32
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476319,933,107 - 19,955,040 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476319,934,120 - 19,955,317 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 35 1 46
Low 1 19 14
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008001275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCSAT00000009983   ⟹   ENSCSAP00000008086
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl898,254,852 - 98,271,514 (-)Ensembl
RefSeq Acc Id: XM_008001275   ⟹   XP_007999466
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1898,256,793 - 98,271,347 (-)NCBI
Vero_WHO_p1.0NW_02366603942,330,381 - 42,346,408 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007999466 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000008086
  ENSCSAP00000008086.1
RefSeq Acc Id: XP_007999466   ⟸   XM_008001275
- UniProtKB: A0A0D9RHJ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCSAP00000008086   ⟸   ENSCSAT00000009983


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000011893 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000009983.1 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/TrEMBL
InterPro Mit_carrier UniProtKB/TrEMBL
  Mitochondrial_sb/sol_carrier UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/TrEMBL
  SLC25A32-like UniProtKB/TrEMBL
KEGG Report csab:103237253 UniProtKB/TrEMBL
NCBI Gene SLC25A32 ENTREZGENE
PANTHER MITOCHONDRIAL FOLATE TRANSPORTER/CARRIER UniProtKB/TrEMBL
  PTHR45683 UniProtKB/TrEMBL
Pfam Mito_carr UniProtKB/TrEMBL
PRINTS MTUNCOUPLING UniProtKB/TrEMBL
PROSITE SOLCAR UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/TrEMBL
UniProt A0A0D9RHJ7 ENTREZGENE, UniProtKB/TrEMBL