Symbol:
Rab1b
Name:
RAB1B, member RAS oncogene family
RGD ID:
8711447
Description:
ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); establishment of endothelial intestinal barrier (ortholog); Golgi organization (ortholog); ASSOCIATED WITH Aicardi-Goutieres Syndrome 3 (ortholog); autosomal recessive cutis laxa type IB (ortholog); Bardet-Biedl syndrome (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog); phagophore assembly site membrane (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
ras-related protein Rab-1B
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955422 19,039,632 - 19,047,088 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955422 19,039,741 - 19,047,088 (-) NCBI ChiLan1.0 ChiLan1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Rab1b (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955422 19,039,632 - 19,047,088 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955422 19,039,741 - 19,047,088 (-) NCBI ChiLan1.0 ChiLan1.0
RAB1B (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 11 66,268,639 - 66,277,492 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 11 66,268,590 - 66,277,492 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 11 66,036,110 - 66,044,963 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 11 65,792,632 - 65,801,539 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 11 65,792,680 - 65,801,539 NCBI Cytogenetic Map 11 q13.2 NCBI HuRef 11 62,361,564 - 62,370,459 (+) NCBI HuRef CHM1_1 11 65,920,155 - 65,929,064 (+) NCBI CHM1_1 T2T-CHM13v2.0 11 66,262,312 - 66,271,155 (+) NCBI T2T-CHM13v2.0
Rab1b (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 19 5,149,235 - 5,157,024 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 19 5,149,233 - 5,157,100 (-) Ensembl GRCm39 Ensembl GRCm38 19 5,099,207 - 5,106,996 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 19 5,099,205 - 5,107,072 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 19 5,099,207 - 5,106,996 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 19 5,099,207 - 5,106,996 (-) NCBI MGSCv36 mm8 Celera 19 4,968,413 - 4,976,202 (-) NCBI Celera Cytogenetic Map 19 A NCBI cM Map 19 4.25 NCBI
Rab1b (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 1 211,835,133 - 211,843,408 (-) NCBI GRCr8 mRatBN7.2 1 202,405,759 - 202,413,850 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl X 50,857,916 - 50,859,762 (+) Ensembl mRatBN7.2 Ensembl mRatBN7.2 Ensembl 1 202,405,759 - 202,413,868 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 1 210,758,818 - 210,766,910 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 1 217,851,200 - 217,859,291 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 1 210,542,234 - 210,550,325 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 1 220,483,529 - 220,491,469 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 1 220,480,834 - 220,491,469 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 1 227,414,583 - 227,422,523 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 1 207,720,833 - 207,727,458 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 1 199,945,209 - 199,953,183 (-) NCBI Celera Cytogenetic Map 1 q43 NCBI
RAB1B (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 9 67,502,340 - 67,511,293 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 11 68,545,212 - 68,554,168 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 11 61,634,017 - 61,642,945 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 11 64,959,957 - 64,968,843 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 11 64,959,957 - 64,968,843 (+) Ensembl panpan1.1 panPan2
RAB1B (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 18 51,026,975 - 51,034,356 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 18 51,028,013 - 51,034,473 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 18 49,635,724 - 49,643,112 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 18 52,065,422 - 52,072,793 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 18 52,065,422 - 52,072,757 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 18 51,165,421 - 51,172,793 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 18 50,739,588 - 50,746,974 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 18 51,529,728 - 51,537,099 (-) NCBI UU_Cfam_GSD_1.0
Rab1b (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404947 6,874,909 - 6,881,904 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936599 3,317,258 - 3,324,213 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936599 3,317,258 - 3,324,208 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
RAB1B (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 2 6,102,354 - 6,116,221 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 2 6,110,438 - 6,116,443 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 2 5,185,936 - 5,188,256 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
RAB1B (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 1 7,989,521 - 7,998,371 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 1 7,989,101 - 7,998,105 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666038 105,271,045 - 105,280,234 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Rab1b (Heterocephalus glaber - naked mole-rat)
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCLAT00000023203 ⟹ ENSCLAP00000022987
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 Ensembl NW_004955422 19,039,632 - 19,047,088 (-) Ensembl
RefSeq Acc Id:
XM_005384425 ⟹ XP_005384482
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955422 19,039,741 - 19,047,088 (-) NCBI
Sequence:
TGCGGGTGGGGCCTCTGGGGCGGAGCGGCCACCATCTTGGAACGGAGGCGGAGCAGAGCCGACTGGGAGCGACCGAGCGGGCCTCCGCCGCCGCCATGAACCCCGAATATGACTACCTGTTTAAGCTG CTTTTGATTGGTGACTCGGGTGTGGGCAAGTCATGCCTGCTTCTGCGGTTCGCTGATGACACATACACGGAGAGCTACATCAGCACCATTGGGGTGGACTTCAAGATCCGAACCATTGAGCTGGATGG CAAAACCATCAAACTTCAGATTTGGGACACAGCTGGTCAGGAACGGTTTCGGACCATCACTTCCAGCTACTACCGGGGGGCCCATGGCATCATCGTGGTGTATGATGTCACTGACCAGGAATCCTATG CCAATGTGAAGCAATGGCTGCAGGAGATTGACCGCTATGCCAGCGAGAATGTCAATAAGCTCCTGGTGGGCAACAAGAGTGACCTCACCACCAAGAAGGTGGTGGACAACACCACAGCCAAGGAGTTC GCAGACTCTCTGGGCATCCCCTTCCTAGAGACAAGTGCCAAGAATGCCACCAATGTCGAGCAGGCTTTCATGACTATGGCTGCTGAGATCAAGAAGCGGATGGGGCCTGGGGCAGCCTCAGGAGGAGA ACGGCCCAACCTCAAGATCGACAGCACCCCTGTGAAGCCAGCTGGTGGTGGCTGTTGCTAGGAGGGGCACTTGGGATGGGACAGGAGGGGACACCTTCAGATGATGCCTCTGGAGGGGTCAGGAGATG CCTCCTTCCTCTCCTGGGCATTTGAGTCTGTGGCTTTGAGGTGTCCTGGGCTCCCCATCTCCTTCTGGCCCATCTGCCTGCTGTCCTGAGCCCTGGTTCTGTCAGGGTCCCCAAGGGAGGACGTCCAG GACCTGTGGCAAGGGCAGGGACGGGGGCTGCTCTGCTGCTGCCTCTAGATACCTTGGAAAGATGCCGCCTTCCTTTGGAACGAGGGCTCCTCTGTCTCCCTTTCCCCGTGTATGCTGCACTGGGTTTC TCTTTCTCTCGCCCCTTCCCAAGAGCTGAGTCCTCCTTGACCTCTGCTGCCCCTGGCTGCAGTCAGCACCTTGGGTCAGGACTGTAGCCAGGGGATCCACGGCCTGTGATTGGATCTAGGGCCCTGGG CTGGACCTCAGGACGGGTATGGGGGGCGCAGAAGTCCAGCAGCCCACCCTTTTCCTCTGCCTCTACACCCCTACACTCACAGCTCAAGCCGTCCAGCTACAGTAGGCTCAGAGCACAGCTAGGGCAGG TGGGCGGGCAGTTACGCTGGGCCTGTGTCTTGAGCCCAGGGGGAGCCTGCTCCTGCCGTCCCCTACCCTGCCAGAGGCAGGCCTGTGTGCTGCCTGCTCACCGTGCCCCTTTGTGCCCGAGGCAGGCG GAGGCGGAAGGCCCACCGTGCCAGAGGCCAGGCACCAGCCTTAACCCTTACTCTGCCAGCACCCCTCCTCTTTCCCTGAGGCAGCACATCTGGCTCATTCTTCCTCTCATTGCTTAGAGCCTAAGGGG GCAGAGCCTCATCCCTGCCTCTATTCTGGGGAATGTGGGTGCACCCCAGGACTGGGGGCTTCTTTGCTCACCCTCTACCCACCCAGGATCCTGGCCCTCTGCCCTCTGGCACAGCTTCTTCCTGCGGA AAGCAAACCTGGTCTCTACCTAAGAAGCCATGTCCCTGTGCTGTCTCTTGTCTGTCCCAACCACACCCTGCCCCCTCTCCAGCTTGTATTTAAATCCCTGGGCCACCCCTTTGGGGCCCTCCCAGGTT CCCCTCTGGTGTCATGTCGGGCATTTTGCAAGGAAAAGCCACTTGGGGAAAAATGGAAAAGGACAACAAAACAATAAATTTCCACTGGCCCTTGGAGGAGCCGAGGGTTTTTGCAAGGAAA
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RefSeq Acc Id:
XP_005384482 ⟸ XM_005384425
- UniProtKB:
A0A8C2YTW4 (UniProtKB/TrEMBL), A0A8C2VWM7 (UniProtKB/TrEMBL)
- Sequence:
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTK KVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKIDSTPVKPAGGGCC
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Ensembl Acc Id:
ENSCLAP00000022987 ⟸ ENSCLAT00000023203