LOC120103339 (small nucleolar RNA SNORA17) - Rat Genome Database

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Gene: LOC120103339 (small nucleolar RNA SNORA17) Rattus norvegicus
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Symbol: LOC120103339
Name: small nucleolar RNA SNORA17
RGD ID: 41217704
Description:
Type: pseudo (Ensembl: snoRNA)
RefSeq Status: MODEL
Previously known as: AABR07048231.1
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8568,044,153 - 68,044,275 (+)NCBIGRCr8
mRatBN7.2563,248,644 - 63,248,766 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl563,248,644 - 63,248,766 (+)NCBImRatBN7.2 Ensembl
mRatBN7.2 Ensembl563,248,644 - 63,248,766 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl568,338,858 - 68,338,980 (-)NCBIRnor6.0rn6Rnor6.0
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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1 to 10 of 41 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1578776Stresp18Stress response QTL 182.9thymus mass (VT:0004954)thymus wet weight (CMO:0000855)52795544072955440Rat
1298067Scl15Serum cholesterol level QTL 154.80.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53321566578215665Rat
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)54786906290099692Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)51887394774251464Rat
1598814Mcs13Mammary carcinoma susceptibility QTL 130.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)56319089069927503Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
61386Bp49Blood pressure QTL 4916.6cerebrum integrity trait (VT:0010549)brain infarction volume (CMO:0001013)56029343498603051Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat

1 to 10 of 41 rows





GenBank Nucleotide JAXUCZ010000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000086555
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl563,248,644 - 63,248,766 (+)Ensembl

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-41337 BioCyc
Ensembl Genes ENSRNOG00000059557 Ensembl
NCBI Gene LOC120103339 ENTREZGENE
PhenoGen LOC120103339 PhenoGen
RatGTEx ENSRNOG00000059557 RatGTEx
RNAcentral URS00006F4534 RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 LOC120103339  small nucleolar RNA SNORA17  AABR07048231.1    Data merged from RGD:15012647 737654 PROVISIONAL
2021-01-27 LOC120103339  small nucleolar RNA SNORA17      Symbol and Name status set to provisional 70820 PROVISIONAL
2019-11-08 AABR07048231.1        Symbol and Name status set to provisional 45752 PROVISIONAL