Gene: LOC100360821 (rCG55159-like) Rattus norvegicus
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Symbol: LOC100360821
Name: rCG55159-like
Description: ASSOCIATED WITH anauxetic dysplasia 1 (ortholog); autosomal recessive distal spinal muscular atrophy 2 (ortholog); Hyperphosphatasia with Mental Retardation Syndrome 2 (ortholog); INTERACTS WITH (-)-epigallocatechin 3-gallate (ortholog); aflatoxin B1 (ortholog); benzo[a]pyrene (ortholog)
AGR Description: Orthologous to human C9orf131 (chromosome 9 open reading frame 131).
Merged Description: Orthologous to human C9orf131 (chromosome 9 open reading frame 131); INTERACTS WITH (-)-epigallocatechin 3-gallate (ortholog); aflatoxin B1 (ortholog); benzo[a]pyrene (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: uncharacterized protein C9orf131 homolog
Orthologs:
Homo sapiens (human) : C9orf131 (chromosome 9 open reading frame 131)  HGNC  Alliance
Mus musculus (house mouse) : 1700022I11Rik (RIKEN cDNA 1700022I11 gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC106147709 (chromosome unknown open reading frame, human C9orf131)
Pan paniscus (bonobo/pygmy chimpanzee) : C9H9orf131 (chromosome 9 C9orf131 homolog)
Canis lupus familiaris (dog) : C11H9orf131 (chromosome 11 C9orf131 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH9orf131 (chromosome unknown C9orf131 homolog)
Sus scrofa (pig) : C1H9orf131 (chromosome 1 C9orf131 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0558,416,058 - 58,421,991 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0562,941,527 - 62,945,979 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4559,461,938 - 59,465,896 (+)NCBIRGSC3.4rn4RGSC3.4
Celera555,789,097 - 55,795,032 (+)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
References - curated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on LOC100360821
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2321337
Created: 2010-05-05
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.