Gene: LOC100362109 (hypothetical protein LOC100362109) Rattus norvegicus
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Symbol:
LOC100362109
Name:
hypothetical protein LOC100362109
RGD ID:
2318773
Description:
Orthologous to human C22orf46P (chromosome 22 open reading frame 46, pseudogene); INTERACTS WITH aristolochic acid A (ortholog); benzo[a]pyrene (ortholog); CGP 52608 (ortholog).
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
uncharacterized protein C22orf46 homolog; uncharacterized protein LOC100362109
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 7 115,458,986 - 115,466,378 (+) NCBI GRCr8 mRatBN7.2 7 113,578,871 - 113,586,264 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 7 113,578,739 - 113,586,266 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 7 123,295,519 - 123,304,163 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 7 123,296,183 - 123,304,066 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 7 123,280,330 - 123,287,609 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 7 120,438,220 - 120,445,536 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 7 109,893,861 - 109,901,652 (+) NCBI Celera Cytogenetic Map 7 q34 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
References
Genomics
Comparative Map Data
LOC100362109 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 7 115,458,986 - 115,466,378 (+) NCBI GRCr8 mRatBN7.2 7 113,578,871 - 113,586,264 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 7 113,578,739 - 113,586,266 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 7 123,295,519 - 123,304,163 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 7 123,296,183 - 123,304,066 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 7 123,280,330 - 123,287,609 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 7 120,438,220 - 120,445,536 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 7 109,893,861 - 109,901,652 (+) NCBI Celera Cytogenetic Map 7 q34 NCBI
C22orf46P Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 22 41,688,937 - 41,698,136 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 22 41,688,877 - 41,698,136 (+) Ensembl GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 22 41,690,628 - 41,698,136 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 22 42,084,941 - 42,094,140 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 22 40,416,497 - 40,424,086 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 22 25,892,983 - 25,900,572 (+) NCBI Celera Cytogenetic Map 22 q13.2 NCBI HuRef 22 25,051,954 - 25,059,543 (+) NCBI HuRef CHM1_1 22 42,046,559 - 42,054,152 (+) NCBI CHM1_1 T2T-CHM13v2.0 22 42,167,914 - 42,177,110 (+) NCBI T2T-CHM13v2.0
4930407I10Rik Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 15 81,943,352 - 81,950,739 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 15 81,943,352 - 81,950,741 (+) Ensembl GRCm39 Ensembl GRCm38 15 82,059,151 - 82,066,538 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 15 82,059,151 - 82,066,540 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 15 81,889,581 - 81,896,968 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 15 81,886,406 - 81,893,793 (+) NCBI MGSCv36 mm8 Celera 15 84,180,805 - 84,188,185 (+) NCBI Celera Cytogenetic Map 15 E1 NCBI cM Map 15 38.4 NCBI
CUNH22orf46 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955413 27,176,899 - 27,184,107 (+) NCBI ChiLan1.0 ChiLan1.0
C10H22orf46 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 10 23,611,419 - 23,618,178 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 10 23,544,538 - 23,551,727 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 10 24,356,416 - 24,363,171 (-) NCBI ROS_Cfam_1.0 UMICH_Zoey_3.1 10 24,073,335 - 24,080,089 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 10 24,392,995 - 24,401,019 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 10 24,568,602 - 24,575,357 (-) NCBI UU_Cfam_GSD_1.0
LOC101961701
C5H22orf46
LOC103223392
CUNH22orf46
miRNA Target Status
Predicted Target Of
Count of predictions: 82 Count of miRNA genes: 70 Interacting mature miRNAs: 73 Transcripts: ENSRNOT00000048614 Prediction methods: Microtar, Rnahybrid Result types: miRGate_prediction 
