Rad51 (RAD51 recombinase) - Rat Genome Database

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Gene: Rad51 (RAD51 recombinase) Heterocephalus glaber
Analyze
Symbol: Rad51
Name: RAD51 recombinase
RGD ID: 18922673
Description: ENCODES a protein that exhibits chromatin binding (ortholog); DNA polymerase binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to alkaloid (ortholog); cellular response to camptothecin (ortholog); cellular response to cisplatin (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH Bloom syndrome (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: DNA repair protein RAD51 homolog 1; RAD51 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248047,957,253 - 7,983,619 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248047,957,175 - 7,983,078 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rad51Naked Mole-Ratbreast cancer resistanceISORAD51 (Homo sapiens)9068941DNA:polymorphism: :135G>CRGDPMID:17301259 and REF_RGD_ID:2298722
Rad51Naked Mole-Ratbreast cancer  ISORAD51 (Homo sapiens)9068941mRNA:increased expression:breastRGDPMID:17942895 and REF_RGD_ID:2292635
Rad51Naked Mole-Ratcardiomyopathy treatmentISORad51 (Rattus norvegicus)9068941 RGDPMID:22384017 and REF_RGD_ID:7240549
Rad51Naked Mole-RatExperimental Liver Neoplasms  ISORad51 (Rattus norvegicus)9068941protein:decreased expression:liverRGDPMID:17219426 and REF_RGD_ID:2292638
Rad51Naked Mole-Rathypertension treatmentISORad51 (Rattus norvegicus)9068941 RGDPMID:24239235 and REF_RGD_ID:8693672
Rad51Naked Mole-RatHypoxia  ISORad51 (Rattus norvegicus)9068941associated with Gliosarcoma and mRNA:decreased expression:tumor (rat)RGDPMID:21266355 and REF_RGD_ID:9831171
Rad51Naked Mole-Ratovarian cancer resistanceISORAD51 (Homo sapiens)9068941DNA:polymorphism: :135G>CRGDPMID:17301259 and REF_RGD_ID:2298722
Rad51Naked Mole-Ratovary epithelial cancer no_associationISORAD51 (Homo sapiens)9068941DNA:polymorphisms: :135G>C and 172G>TRGDPMID:15924337 and REF_RGD_ID:2298723
Rad51Naked Mole-Ratpancreatic cancer  ISORad51 (Rattus norvegicus)9068941protein:increased expression:pancreas (rat)RGDPMID:20197614 and REF_RGD_ID:9831172
1 to 9 of 9 rows
1 to 12 of 12 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rad51Naked Mole-RatBloom syndrome  ISORAD51 (Homo sapiens)8554872ClinVar Annotator: match by term: Bloom syndromeClinVarPMID:28492532
Rad51Naked Mole-RatBreast Cancer, Familial  ISORAD51 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10807537 more ...
Rad51Naked Mole-RatBreast Cancer, Familial  ISORAD51 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10807537 more ...
Rad51Naked Mole-Ratcolorectal cancer  ISORAD51 (Homo sapiens)8554872ClinVar Annotator: match by term: Familial colorectal cancerClinVarPMID:28492532
Rad51Naked Mole-RatFanconi anemia complementation group R  ISORAD51 (Homo sapiens)8554872ClinVar Annotator: match by term: Fanconi anemia complementation group RClinVarPMID:15908697 more ...
Rad51Naked Mole-Ratgenetic disease  ISORAD51 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:15908697 more ...
Rad51Naked Mole-Rathereditary breast ovarian cancer syndrome  ISORAD51 (Homo sapiens)8554872ClinVar Annotator: match by term: Breast cancer more ...ClinVarPMID:11248061 more ...
Rad51Naked Mole-RatHereditary Neoplastic Syndromes  ISORAD51 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10807537 more ...
Rad51Naked Mole-RatHereditary Neoplastic Syndromes  ISORAD51 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10807537 more ...
Rad51Naked Mole-RatMirror Movements 2  ISORAD51 (Homo sapiens)8554872ClinVar Annotator: match by term: Mirror movements 2ClinVarPMID:21242494 more ...
Rad51Naked Mole-Ratmosaic variegated aneuploidy syndrome 1  ISORAD51 (Homo sapiens)8554872ClinVar Annotator: match by term: Mosaic variegated aneuploidy syndrome 1ClinVarPMID:28492532
Rad51Naked Mole-Ratovarian cancer  ISORAD51 (Homo sapiens)8554872ClinVar Annotator: match by term: Ovarian cancerClinVarPMID:25741868
1 to 12 of 12 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rad51Naked Mole-RatBreast Neoplasms  ISORAD51 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTD 
Rad51Naked Mole-RatGenetic Predisposition to Disease  ISORAD51 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:22613844
Rad51Naked Mole-RatHead and Neck Neoplasms  ISORAD51 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:22613844
Rad51Naked Mole-RatMicronuclei, Chromosome-Defective  ISORAD51 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:9885240
Rad51Naked Mole-RatTriple Negative Breast Neoplasms  ISORAD51 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:34998818
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rad51Naked Mole-Ratbreast cancer susceptibilityISORAD51 (Homo sapiens)7240710 OMIM 
Rad51Naked Mole-RatFanconi anemia complementation group R susceptibilityISORAD51 (Homo sapiens)7240710 OMIM 
Rad51Naked Mole-RatMirror Movements 2 susceptibilityISORAD51 (Homo sapiens)7240710 OMIM 


Biological Process
1 to 20 of 43 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rad51Naked Mole-Ratcellular response to alkaloid acts_upstream_of_or_withinISOMGI:5444025 and MGI:54440279068941 PMID:22778135MGIPMID:22778135
Rad51Naked Mole-Ratcellular response to camptothecin involved_inISORAD51 (Homo sapiens)9068941 PMID:23509288UniProtPMID:23509288
Rad51Naked Mole-Ratcellular response to cisplatin  ISORad51 (Rattus norvegicus)9068941 RGDPMID:14755242 and REF_RGD_ID:9831188
Rad51Naked Mole-Ratcellular response to gamma radiation  ISORad51 (Rattus norvegicus)9068941 RGDPMID:9885240 and REF_RGD_ID:9831175
Rad51Naked Mole-Ratcellular response to hydroxyurea acts_upstream_of_or_withinISOMGI:54440259068941 PMID:22778135MGIPMID:22778135
Rad51Naked Mole-Ratcellular response to ionizing radiation involved_inISORAD51 (Homo sapiens)9068941 PMID:14636569ComplexPortalPMID:14636569
Rad51Naked Mole-Ratcellular response to ionizing radiation involved_inISORAD51 (Homo sapiens)9068941 PMID:23509288 and PMID:23754376UniProtPMID:23509288 and PMID:23754376
Rad51Naked Mole-Ratchromosome organization involved in meiotic cell cycle acts_upstream_of_or_withinISOMGI:54440259068941 PMID:22778135MGIPMID:22778135
Rad51Naked Mole-Ratchromosome organization involved in meiotic cell cycle involved_inIEAPANTHER:PTN000534644 and PANTHER:PTN001489006150520179 TreeGrafterGO_REF:0000118
Rad51Naked Mole-RatDNA damage response involved_inIEAUniProtKB-KW:KW-0227150520179 UniProtGO_REF:0000043
Rad51Naked Mole-RatDNA metabolic process involved_inIEAInterPro:IPR020587150520179 InterProGO_REF:0000002
Rad51Naked Mole-RatDNA recombinase assembly involved_inIEAPANTHER:PTN000534644 and PANTHER:PTN001489006150520179 TreeGrafterGO_REF:0000118
Rad51Naked Mole-RatDNA recombination involved_inIEAUniProtKB-KW:KW-0233150520179 UniProtGO_REF:0000043
Rad51Naked Mole-RatDNA recombination involved_inIEAARBA:ARBA00028026150520179 UniProtGO_REF:0000117
Rad51Naked Mole-RatDNA repair involved_inIEAUniProtKB-KW:KW-0234150520179 UniProtGO_REF:0000043
Rad51Naked Mole-RatDNA repair involved_inIEAInterPro:IPR020588150520179 InterProGO_REF:0000002
Rad51Naked Mole-RatDNA repair involved_inIEAARBA:ARBA00029008150520179 UniProtGO_REF:0000117
Rad51Naked Mole-RatDNA strand invasion involved_inIEAPANTHER:PTN000534644 and PANTHER:PTN001489006150520179 TreeGrafterGO_REF:0000118
Rad51Naked Mole-Ratdouble-strand break repair involved in meiotic recombination involved_inISORad51 (Mus musculus)9068941 PMID:15834424UniProtPMID:15834424
Rad51Naked Mole-Ratdouble-strand break repair via homologous recombination acts_upstream_of_or_withinISORAD51 (Homo sapiens)9068941 PMID:16428451MGIPMID:16428451
1 to 20 of 43 rows

Cellular Component
1 to 20 of 26 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rad51Naked Mole-Ratchromatin located_inISORAD51 (Homo sapiens)9068941 PMID:25585578 and PMID:26323318UniProtPMID:25585578 and PMID:26323318
Rad51Naked Mole-Ratchromosome located_inISORad51 (Mus musculus)9068941 PMID:30272023 more ...UniProtPMID:30272023 more ...
Rad51Naked Mole-Ratchromosome, telomeric region located_inISORad51 (Mus musculus)9068941 PMID:21076401BHF-UCLPMID:21076401
Rad51Naked Mole-Ratchromosome, telomeric region located_inISORAD51 (Homo sapiens)9068941 PMID:21076401BHF-UCLPMID:21076401
Rad51Naked Mole-Ratcondensed chromosome located_inISORad51 (Mus musculus)9068941 PMID:10809667 more ...MGIPMID:10809667 more ...
Rad51Naked Mole-Ratcondensed nuclear chromosome located_inIEAPANTHER:PTN000534644 and PANTHER:PTN001489006150520179 TreeGrafterGO_REF:0000118
Rad51Naked Mole-Ratcytoplasm located_inISORAD51 (Homo sapiens)9068941 PMID:16215984 more ...UniProtPMID:16215984 more ...
Rad51Naked Mole-Ratcytoplasm located_inISORad51 (Mus musculus)9068941 PMID:29955025UniProtPMID:29955025
Rad51Naked Mole-Ratcytosol located_inISORAD51 (Homo sapiens)9068941 HPAGO_REF:0000052
Rad51Naked Mole-Ratlateral element located_inISORad51 (Mus musculus)9068941 PMID:18694567 and PMID:21743440MGIPMID:18694567 and PMID:21743440
Rad51Naked Mole-Ratlateral element located_inISORAD51 (Homo sapiens)9068941 PMID:9774970MGIPMID:9774970
Rad51Naked Mole-Ratmale germ cell nucleus located_inISORad51 (Mus musculus)9068941 PMID:23133398MGIPMID:23133398
Rad51Naked Mole-Ratmitochondrion located_inISORAD51 (Homo sapiens)9068941 PMID:20413593UniProtPMID:20413593
Rad51Naked Mole-Ratmitochondrion located_inISORAD51 (Homo sapiens)9068941 PMID:34800366FlyBasePMID:34800366
Rad51Naked Mole-Ratnuclear chromosome located_inISORAD51 (Homo sapiens)9068941 PMID:23754376UniProtPMID:23754376
Rad51Naked Mole-Ratnuclear ubiquitin ligase complex part_ofISORAD51 (Homo sapiens)9068941 PMID:14636569ComplexPortalPMID:14636569
Rad51Naked Mole-Ratnucleolus located_inISORAD51 (Homo sapiens)9068941 HPAGO_REF:0000052
Rad51Naked Mole-Ratnucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043
Rad51Naked Mole-Ratnucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
Rad51Naked Mole-Ratperinuclear region of cytoplasm located_inISORAD51 (Homo sapiens)9068941 PMID:16215984UniProtPMID:16215984
1 to 20 of 26 rows

Molecular Function
1 to 20 of 65 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rad51Naked Mole-RatATP binding enablesIEAUniProtKB-KW:KW-0067150520179 UniProtGO_REF:0000043
Rad51Naked Mole-RatATP binding enablesIEAInterPro:IPR020587 and InterPro:IPR020588150520179 InterProGO_REF:0000002
Rad51Naked Mole-RatATP hydrolysis activity enablesIEAInterPro:IPR003593150520179 InterProGO_REF:0000002
Rad51Naked Mole-RatATP-dependent activity, acting on DNA enablesIEAInterPro:IPR011941 and InterPro:IPR020587150520179 InterProGO_REF:0000002
Rad51Naked Mole-RatATP-dependent activity, acting on DNA enablesIEAPANTHER:PTN000534644 and PANTHER:PTN001489006150520179 TreeGrafterGO_REF:0000118
Rad51Naked Mole-RatATP-dependent DNA damage sensor activity enablesIEAInterPro:IPR020588150520179 InterProGO_REF:0000002
Rad51Naked Mole-Ratchromatin binding enablesISORAD51 (Homo sapiens)9068941 PMID:23401855UniProtPMID:23401855
Rad51Naked Mole-Ratchromatin binding enablesISORad51 (Mus musculus)9068941 PMID:24108124MGIPMID:24108124
Rad51Naked Mole-RatDNA binding enablesIEAInterPro:IPR020587 and InterPro:IPR020588150520179 InterProGO_REF:0000002
Rad51Naked Mole-RatDNA binding enablesIEAUniProtKB-KW:KW-0238150520179 UniProtGO_REF:0000043
Rad51Naked Mole-RatDNA polymerase binding enablesISOUniProtKB:Q7Z5Q59068941 PMID:19995904UniProtPMID:19995904
Rad51Naked Mole-RatDNA strand exchange activity enablesIEAPANTHER:PTN000534644 and PANTHER:PTN001489006150520179 TreeGrafterGO_REF:0000118
Rad51Naked Mole-RatDNA strand exchange activity enablesIEAInterPro:IPR011941150520179 InterProGO_REF:0000002
Rad51Naked Mole-Ratdouble-stranded DNA binding enablesIEAInterPro:IPR011941150520179 InterProGO_REF:0000002
Rad51Naked Mole-Ratdouble-stranded DNA binding enablesIEAPANTHER:PTN000534644 and PANTHER:PTN001489006150520179 TreeGrafterGO_REF:0000118
Rad51Naked Mole-Ratenzyme binding enablesISOUniProtKB:Q9NXL9 and UniProtKB:Q9UJA39068941 PMID:23401855UniProtPMID:23401855
Rad51Naked Mole-Ratidentical protein binding enablesISOUniProtKB:Q06609-19068941 PMID:17515903 and PMID:17515904IntActPMID:17515903 and PMID:17515904
Rad51Naked Mole-Ratidentical protein binding enablesISOUniProtKB:Q066099068941 PMID:12442171 more ...IntActPMID:12442171 more ...
Rad51Naked Mole-Ratnucleotide binding enablesIEAInterPro:IPR010995150520179 InterProGO_REF:0000002
Rad51Naked Mole-Ratnucleotide binding enablesIEAUniProtKB-KW:KW-0547150520179 UniProtGO_REF:0000043
1 to 20 of 65 rows

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rad51Naked Mole-Rathomologous recombination pathway of double-strand break repair   ISORAD51 (Homo sapiens)9068941 RGDPMID:20690856 and REF_RGD_ID:8662366
PMID:22301074   PMID:30032202  



Rad51
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248047,957,253 - 7,983,619 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248047,957,175 - 7,983,078 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
RAD51
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381540,694,733 - 40,732,340 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1540,694,774 - 40,732,340 (+)EnsemblGRCh38hg38GRCh38
GRCh371540,987,372 - 41,024,538 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361538,774,651 - 38,811,648 (+)NCBINCBI36Build 36hg18NCBI36
Build 341538,774,660 - 38,811,646NCBI
Celera1517,755,220 - 17,792,245 (+)NCBICelera
Cytogenetic Map15q15.1NCBI
HuRef1517,834,870 - 17,872,189 (+)NCBIHuRef
CHM1_11541,107,382 - 41,144,356 (+)NCBICHM1_1
T2T-CHM13v2.01538,500,415 - 38,538,035 (+)NCBIT2T-CHM13v2.0
Rad51
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392118,943,295 - 118,966,554 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2118,943,274 - 118,977,926 (+)EnsemblGRCm39 Ensembl
GRCm382119,112,814 - 119,136,073 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2119,112,793 - 119,147,445 (+)EnsemblGRCm38mm10GRCm38
MGSCv372118,938,553 - 118,961,806 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362118,804,258 - 118,827,511 (+)NCBIMGSCv36mm8
Celera2120,265,474 - 120,286,601 (+)NCBICelera
Cytogenetic Map2E5NCBI
cM Map259.92NCBI
Rad51
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83126,554,210 - 126,578,888 (+)NCBIGRCr8
mRatBN7.23106,099,753 - 106,125,038 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3106,100,381 - 106,125,035 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3109,773,488 - 109,798,183 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03118,369,034 - 118,393,719 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03116,029,412 - 116,054,104 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03110,918,240 - 110,942,920 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3110,918,243 - 110,942,917 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03117,468,402 - 117,493,566 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43105,625,265 - 105,650,392 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3105,013,953 - 105,038,371 (+)NCBICelera
Cytogenetic Map3q35NCBI
Rad51
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554167,566,686 - 7,590,628 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554167,566,715 - 7,590,628 (+)NCBIChiLan1.0ChiLan1.0
RAD51
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21629,938,330 - 29,973,033 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11534,089,788 - 34,123,970 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01519,638,310 - 19,672,474 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11537,891,061 - 37,925,207 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1537,891,056 - 37,925,207 (+)Ensemblpanpan1.1panPan2
RAD51
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1307,842,540 - 7,877,128 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl307,842,540 - 7,877,606 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha307,896,289 - 7,931,113 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0307,968,785 - 8,004,039 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl307,968,784 - 8,004,029 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1307,892,599 - 7,927,542 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0307,999,640 - 8,034,564 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0308,128,251 - 8,163,404 (+)NCBIUU_Cfam_GSD_1.0
Rad51
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864086,263,812 - 86,288,764 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364714,114,530 - 4,136,248 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364714,119,020 - 4,136,811 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RAD51
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1130,586,665 - 130,640,136 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11130,592,414 - 130,640,326 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21145,751,297 - 145,798,501 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RAD51
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12642,281,085 - 42,319,394 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2642,279,608 - 42,318,169 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604898,661,431 - 98,701,069 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

.






Ensembl Acc Id: ENSHGLT00000025845   ⟹   ENSHGLP00000025618
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248047,957,253 - 7,983,619 (+)Ensembl
RefSeq Acc Id: XM_004861569   ⟹   XP_004861626
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248047,957,175 - 7,983,078 (+)NCBI
RefSeq Acc Id: XM_021241898   ⟹   XP_021097557
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248047,957,175 - 7,983,078 (+)NCBI
Protein RefSeqs XP_004861626 (Get FASTA)   NCBI Sequence Viewer  
  XP_021097557 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000025618
  ENSHGLP00000051768
GenBank Protein JAO01646 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_004861626   ⟸   XM_004861569
- Peptide Label: isoform X1
- UniProtKB: A0A0N8EUC2 (UniProtKB/TrEMBL),   G5BLZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021097557   ⟸   XM_021241898
- Peptide Label: isoform X2
- UniProtKB: A0AAX6RIJ2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000025618   ⟸   ENSHGLT00000025845



1 to 28 of 28 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSHGLG00000018242 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000025845 ENTREZGENE
  ENSHGLT00000042649 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
  5' to 3' exonuclease, C-terminal subdomain UniProtKB/TrEMBL
InterPro AAA+_ATPase UniProtKB/TrEMBL
  DNA_recomb/repair_Rad51 UniProtKB/TrEMBL
  DNA_recomb/repair_Rad51_C UniProtKB/TrEMBL
  DNA_recomb/repair_RecA-like UniProtKB/TrEMBL
  DNA_repair_Rad51/TF_NusA_a-hlx UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  RecA_ATP-bd UniProtKB/TrEMBL
  RecA_monomer-monomer_interface UniProtKB/TrEMBL
KEGG Report hgl:101715048 UniProtKB/TrEMBL
NCBI Gene Rad51 ENTREZGENE
PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 1 UniProtKB/TrEMBL
  RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER UniProtKB/TrEMBL
Pfam HHH_5 UniProtKB/TrEMBL
  Rad51 UniProtKB/TrEMBL
PIRSF Rad51 UniProtKB/TrEMBL
PROSITE RECA_2 UniProtKB/TrEMBL
  RECA_3 UniProtKB/TrEMBL
SMART AAA UniProtKB/TrEMBL
Superfamily-SCOP SSF47794 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt A0A0N8EUC2 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6RIJ2 ENTREZGENE, UniProtKB/TrEMBL
  G5BLZ5 ENTREZGENE, UniProtKB/TrEMBL
1 to 28 of 28 rows