GPI (glucose-6-phosphate isomerase) - Rat Genome Database

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Pathways
Gene: GPI (glucose-6-phosphate isomerase) Chlorocebus sabaeus
Analyze
Symbol: GPI
Name: glucose-6-phosphate isomerase
RGD ID: 18796066
Description: ENCODES a protein that exhibits glucose-6-phosphate isomerase activity (ortholog); monosaccharide binding (ortholog); INVOLVED IN erythrocyte homeostasis (ortholog); glucose 6-phosphate metabolic process (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN ciliary membrane (inferred); cytoplasm (inferred); cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC103234470
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap1624,369,496 - 24,422,238 (-)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_0236660737,177,821 - 7,221,208 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.1629,404,067 - 29,451,290 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl629,403,500 - 29,453,162 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
JBrowse:




References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
GPI
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap1624,369,496 - 24,422,238 (-)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_0236660737,177,821 - 7,221,208 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.1629,404,067 - 29,451,290 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl629,403,500 - 29,453,162 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
GPI
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381934,359,718 - 34,402,413 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1934,359,480 - 34,402,413 (+)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh371934,855,645 - 34,893,318 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361939,547,909 - 39,583,076 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341939,547,908 - 39,583,076NCBI
Celera1931,557,376 - 31,605,748 (+)NCBICelera
Cytogenetic Map19q13.11NCBI
HuRef1931,360,777 - 31,377,222 (+)NCBIHuRef
HuRef1931,390,807 - 31,399,974 (+)NCBIHuRef
CHM1_11934,857,156 - 34,895,165 (+)NCBICHM1_1
T2T-CHM13v2.01936,887,003 - 36,946,977 (+)NCBIT2T-CHM13v2.0
Gpi1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39733,900,752 - 33,929,761 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl733,900,755 - 33,929,780 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38734,201,327 - 34,230,336 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl734,201,330 - 34,230,336 (-)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv37734,986,346 - 35,015,324 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36733,910,918 - 33,939,022 (-)NCBIMGSCv36mm8
MGSCv36724,688,418 - 24,717,214 (-)NCBIMGSCv36mm8
Celera729,335,681 - 29,371,931 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map719.46NCBI
Gpi
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8195,965,389 - 95,996,932 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl195,965,396 - 95,993,261 (-)EnsemblGRCr8
mRatBN7.2186,828,211 - 86,856,077 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl186,828,216 - 86,856,086 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx192,231,564 - 92,259,517 (-)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01100,697,568 - 100,725,522 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0193,989,860 - 94,017,813 (-)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd194,581,305 - 94,609,163 (-)NCBI
Lyon_Normotensive199,706,828 - 99,734,696 (-)NCBI
Lyon_Hypertensive196,240,132 - 96,267,996 (-)NCBI
F344_StmMcwi194,684,582 - 94,712,535 (-)NCBI
Rnor_6.0190,063,411 - 90,091,287 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl190,063,411 - 90,091,287 (-)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.0191,207,014 - 91,234,890 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4186,658,836 - 86,686,712 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera181,194,482 - 81,222,306 (-)NCBICelera
RGSC_v3.1186,736,946 - 86,764,823 (-)NCBI
Cytogenetic Map1q21NCBI
Gpi
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554683,980,999 - 4,008,652 (+)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_0049554683,980,999 - 4,007,553 (+)NCBIChiLan1.0ChiLan1.0
GPI
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22040,351,367 - 40,402,743 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11942,351,411 - 42,404,890 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01931,301,469 - 31,355,362 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11940,024,584 - 40,080,598 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1940,024,584 - 40,080,598 (+)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
GPI
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11117,922,380 - 117,948,325 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1117,922,635 - 117,948,316 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1117,320,830 - 117,346,503 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01118,518,230 - 118,543,889 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1118,497,395 - 118,544,065 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11118,079,121 - 118,105,067 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01117,705,505 - 117,731,413 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01118,763,883 - 118,789,615 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Gpi
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap11518,236,540 - 18,262,959 (-)NCBImIctTri1.hap1
HiC_Itri_2NW_02440934910,037,338 - 10,063,762 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365701,579,372 - 1,608,788 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365701,582,120 - 1,608,537 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPI
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl644,038,357 - 44,069,328 (+)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.1644,038,374 - 44,069,331 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2639,516,820 - 39,547,963 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap6q12NCBI
Gpi
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247948,826,281 - 8,851,614 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_0046247948,823,449 - 8,851,625 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl2826,133,779 - 26,158,947 (+)Ensembl
Gpi
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v12164,454,431 - 164,482,993 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1

Variants

.
Variants in GPI
1471 total Variants

Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007996256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JBLKOC010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000002677   ⟹   ENSCSAP00000000978
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl629,403,500 - 29,453,162 (+)Ensembl
RefSeq Acc Id: XM_007996256   ⟹   XP_007994447
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
mChlSab1.0.hap1624,369,496 - 24,422,238 (-)NCBI
Vero_WHO_p1.0NW_0236660737,177,821 - 7,221,208 (+)NCBI
ChlSab1.1629,404,067 - 29,451,290 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007994447 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000000978
  ENSCSAP00000000978.1
RefSeq Acc Id: XP_007994447   ⟸   XM_007996256
- UniProtKB: A0A0D9QX89 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000000978   ⟸   ENSCSAT00000002677


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000004646 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000002677.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1390.10 UniProtKB/TrEMBL
  Glucose-6-phosphate isomerase like protein, domain 1 UniProtKB/TrEMBL
InterPro G6P_Isomerase UniProtKB/TrEMBL
  G6P_Isomerase_C UniProtKB/TrEMBL
  Phosphoglucose_isomerase_CS UniProtKB/TrEMBL
  SIS_dom_sf UniProtKB/TrEMBL
  SIS_PGI_1 UniProtKB/TrEMBL
  SIS_PGI_2 UniProtKB/TrEMBL
NCBI Gene LOC103234470 ENTREZGENE
PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE UniProtKB/TrEMBL
  PTHR11469 UniProtKB/TrEMBL
Pfam PGI UniProtKB/TrEMBL
PRINTS G6PISOMERASE UniProtKB/TrEMBL
PROSITE P_GLUCOSE_ISOMERASE_1 UniProtKB/TrEMBL
  P_GLUCOSE_ISOMERASE_2 UniProtKB/TrEMBL
  P_GLUCOSE_ISOMERASE_3 UniProtKB/TrEMBL
Superfamily-SCOP SSF53697 UniProtKB/TrEMBL
UniProt A0A0D9QX89 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 GPI  glucose-6-phosphate isomerase  LOC103234470  glucose-6-phosphate isomerase  Symbol and/or name change 5135510 APPROVED