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Gene: HSD17B10 (hydroxysteroid 17-beta dehydrogenase 10) Chlorocebus sabaeus

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Symbol:

HSD17B10

Name:

hydroxysteroid 17-beta dehydrogenase 10

RGD ID:

18606373

Description:

ENCODES a protein that exhibits acetoacetyl-CoA reductase activity (ortholog); amyloid-beta binding (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN Leydig cell differentiation (ortholog); male gonad development (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Atkin Syndrome (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

3-hydroxyacyl-CoA dehydrogenase type-2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	49,568,206 - 49,571,356 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	49,567,267 - 49,571,292 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666086	3,522,557 - 3,525,740 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HSD17B10	Green Monkey	Alzheimer's disease		ISO	HSD17B10 (Homo sapiens)	9068941	protein:increased expression:brain (human)	RGD	PMID:9338779 and REF_RGD_ID:1358426
HSD17B10	Green Monkey	Alzheimer's disease	treatment	ISO	Hsd17b10 (Mus musculus)	9068941		RGD	PMID:21307267 and REF_RGD_ID:13792781
HSD17B10	Green Monkey	Alzheimer's disease		ISO	Hsd17b10 (Mus musculus)	9068941	protein:increased expression:hippocampus more ...	RGD	PMID:11869808 and REF_RGD_ID:632866
HSD17B10	Green Monkey	azoospermia		ISO	Hsd17b10 (Mus musculus)	9068941	mRNA:increased expression:testis	RGD	PMID:9851691 and REF_RGD_ID:13792783
HSD17B10	Green Monkey	COVID-19		ISO	HSD17B10 (Homo sapiens)	9068941	mRNA:increased expression:peripheral blood mononuclear cell (human)	RGD	PMID:32228226 and REF_RGD_ID:28912744
HSD17B10	Green Monkey	osteosarcoma	treatment	ISO	HSD17B10 (Homo sapiens)	9068941		RGD	PMID:19449377 and REF_RGD_ID:13792789
HSD17B10	Green Monkey	pheochromocytoma		ISO	HSD17B10 (Homo sapiens)	9068941		RGD	PMID:25879199 and REF_RGD_ID:13792787

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HSD17B10	Green Monkey	Atkin Syndrome		ISO	HSD17B10 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Atkin Flaitz Patil Smith syndrome	ClinVar	PMID:26059843 and PMID:28492532
HSD17B10	Green Monkey	autistic disorder		ISO	HSD17B10 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism	ClinVar	PMID:21681106 and PMID:30208311
HSD17B10	Green Monkey	Cornelia de Lange syndrome 2		ISO	HSD17B10 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital muscular hypertrophy-cerebral syndrome	ClinVar	PMID:26386245 more ...
HSD17B10	Green Monkey	genetic disease		ISO	HSD17B10 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:15342248 more ...
HSD17B10	Green Monkey	non-syndromic X-linked intellectual disability 1		ISO	HSD17B10 (Homo sapiens)	8554872	ClinVar Annotator: match by term: INTELLECTUAL DEVELOPMENTAL DISORDER and X-LINKED 1	ClinVar	PMID:26059843 and PMID:28492532
HSD17B10	Green Monkey	paraplegia		ISO	HSD17B10 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Spastic paraplegia	ClinVar	PMID:28492532
HSD17B10	Green Monkey	syndromic X-linked intellectual disability Lubs type		ISO	HSD17B10 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Syndromic X-linked intellectual disability Lubs type	ClinVar	PMID:25741868
HSD17B10	Green Monkey	syndromic X-linked intellectual disability type 10		ISO	HSD17B10 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10521307 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HSD17B10	Green Monkey	lung adenocarcinoma		ISO	HSD17B10 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:19381893

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HSD17B10	Green Monkey	syndromic X-linked intellectual disability type 10		ISO	HSD17B10 (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HSD17B10	Green Monkey	androgen metabolic process	involved_in	IEA	PANTHER:PTN000671995	150520179		TreeGrafter	GO_REF:0000118
HSD17B10	Green Monkey	androgen metabolic process	involved_in	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	bile acid biosynthetic process	involved_in	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	brexanolone metabolic process	involved_in	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	C21-steroid hormone metabolic process	involved_in	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	estrogen metabolic process	involved_in	IEA	PANTHER:PTN000671995	150520179		TreeGrafter	GO_REF:0000118
HSD17B10	Green Monkey	estrogen metabolic process	involved_in	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	fatty acid beta-oxidation	involved_in	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	fatty acid metabolic process	involved_in	IEA	PANTHER:PTN000671995	150520179		TreeGrafter	GO_REF:0000118
HSD17B10	Green Monkey	isoleucine catabolic process	involved_in	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	Leydig cell differentiation		ISO	Hsd17b10 (Rattus norvegicus)	9068941		RGD	PMID:12810569 and REF_RGD_ID:2302236
HSD17B10	Green Monkey	male gonad development		ISO	Hsd17b10 (Rattus norvegicus)	9068941		RGD	PMID:12810569 and REF_RGD_ID:2302236
HSD17B10	Green Monkey	mitochondrial tRNA 3'-end processing	involved_in	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	mitochondrial tRNA 5'-end processing	involved_in	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	mitochondrial tRNA methylation	involved_in	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	mitochondrion organization	involved_in	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	protein homotetramerization	involved_in	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HSD17B10	Green Monkey	endoplasmic reticulum	located_in	ISO	Hsd17b10 (Mus musculus)	9068941	PMID:15962010	MGI	PMID:15962010
HSD17B10	Green Monkey	mitochondrial nucleoid	located_in	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	mitochondrial ribonuclease P complex	part_of	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	mitochondrion	located_in	IEA	UniProtKB:Q99714 more ...	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	mitochondrion	located_in	IEA	PANTHER:PTN000671995	150520179		TreeGrafter	GO_REF:0000118
HSD17B10	Green Monkey	tRNA methyltransferase complex	part_of	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HSD17B10	Green Monkey	17-beta-hydroxysteroid dehydrogenase (NAD+) activity	enables	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity	enables	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	3-hydroxyacyl-CoA dehydrogenase activity	enables	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	acetoacetyl-CoA reductase activity		ISO	Hsd17b10 (Rattus norvegicus)	9068941		RGD	PMID:11023795 and REF_RGD_ID:2302237
HSD17B10	Green Monkey	amyloid-beta binding		ISO	Hsd17b10 (Rattus norvegicus)	9068941		RGD	PMID:11023795 and REF_RGD_ID:2302237
HSD17B10	Green Monkey	chenodeoxycholate 7-alpha-dehydrogenase (NAD+) activity	enables	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	cholate 7-alpha-dehydrogenase (NAD+) activity	enables	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	estradiol 17-beta-dehydrogenase [NAD(P)+] activity		ISO	Hsd17b10 (Rattus norvegicus)	9068941		RGD	PMID:11023795 and REF_RGD_ID:2302237
HSD17B10	Green Monkey	estradiol 17-beta-dehydrogenase [NAD(P)+] activity	enables	IEA	PANTHER:PTN000671995	150520179		TreeGrafter	GO_REF:0000118
HSD17B10	Green Monkey	identical protein binding		ISO	Hsd17b10 (Rattus norvegicus)	9068941	homotetramerization	RGD	PMID:11023795 and REF_RGD_ID:2302237
HSD17B10	Green Monkey	isoursodeoxycholate 7-beta-dehydrogenase (NAD+) activity	enables	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	NAD binding		ISO	Hsd17b10 (Rattus norvegicus)	9068941		RGD	PMID:11023795 and REF_RGD_ID:2302237
HSD17B10	Green Monkey	nuclear estrogen receptor binding		ISO	Esr1 (Rattus norvegicus)	9068941		RGD	PMID:19422801 and REF_RGD_ID:4890964
HSD17B10	Green Monkey	oxidoreductase activity	enables	IEA	UniProtKB-KW:KW-0560	150520179		UniProt	GO_REF:0000043
HSD17B10	Green Monkey	oxidoreductase activity	enables	IEA	InterPro:IPR020904	150520179		InterPro	GO_REF:0000002
HSD17B10	Green Monkey	protein binding	enables	ISO	UniProtKB:Q7L0Y3	9068941	PMID:18984158 more ...	IntAct	PMID:18984158 more ...
HSD17B10	Green Monkey	protein binding	enables	ISO	UniProtKB:P05067-PRO_0000000092	9068941	PMID:32825572	IntAct	PMID:32825572
HSD17B10	Green Monkey	protein binding	enables	ISO	UniProtKB:P13639 and UniProtKB:Q12931	9068941	PMID:29128334	IntAct	PMID:29128334
HSD17B10	Green Monkey	protein binding	enables	ISO	UniProtKB:P05067	9068941	PMID:32814053 and PMID:9338779	IntAct	PMID:32814053 and PMID:9338779
HSD17B10	Green Monkey	steroid binding		ISO	Hsd17b10 (Rattus norvegicus)	9068941		RGD	PMID:11023795 and REF_RGD_ID:2302237
HSD17B10	Green Monkey	testosterone dehydrogenase (NAD+) activity	enables	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	testosterone dehydrogenase [NAD(P)+] activity	enables	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	tRNA binding	enables	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107
HSD17B10	Green Monkey	ursodeoxycholate 7-beta-dehydrogenase (NAD+) activity	enables	IEA	UniProtKB:Q99714 and ensembl:ENSP00000168216	150520179		Ensembl	GO_REF:0000107

Imported Annotations - SMPDB

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HSD17B10	Green Monkey	3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00138
HSD17B10	Green Monkey	3-hydroxyacyl-CoA dehydrogenase deficiency pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00568
HSD17B10	Green Monkey	3-hydroxyisobutyric aciduria pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00521 and SMP:00522
HSD17B10	Green Monkey	3-methylcrotonyl CoA carboxylase 1 deficiency pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00237
HSD17B10	Green Monkey	3-methylglutaconic aciduria type 1 pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00139
HSD17B10	Green Monkey	3-methylglutaconic aciduria type 3 pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00140
HSD17B10	Green Monkey	fatty acid beta degradation pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00480
HSD17B10	Green Monkey	fatty acid elongation pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00054
HSD17B10	Green Monkey	isobutyryl-CoA dehydrogenase deficiency pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00523
HSD17B10	Green Monkey	isovaleric acidemia pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00238 and SMP:00524
HSD17B10	Green Monkey	maple syrup urine disease pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00199
HSD17B10	Green Monkey	methylmalonate semialdehyde dehydrogenase deficiency pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00384
HSD17B10	Green Monkey	methylmalonic acidemia pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00200
HSD17B10	Green Monkey	propionic acidemia pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00236
HSD17B10	Green Monkey	valine, leucine and isoleucine degradation pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00032
HSD17B10	Green Monkey	valproic acid pharmacokinetics pathway		ISO	HSD17B10 (Homo sapiens)	9068941		SMPDB	SMP:00635

PMID:30032202

HSD17B10
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	49,568,206 - 49,571,356 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	49,567,267 - 49,571,292 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666086	3,522,557 - 3,525,740 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

HSD17B10
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	53,431,258 - 53,434,376 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	53,431,258 - 53,434,370 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	53,458,206 - 53,461,323 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	53,474,931 - 53,478,048 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	53,341,230 - 53,344,341	NCBI
Celera	X	57,289,763 - 57,292,880 (-)	NCBI		Celera
Cytogenetic Map	X	p11.22	NCBI
HuRef	X	50,515,835 - 50,518,952 (-)	NCBI		HuRef
CHM1_1	X	53,448,673 - 53,451,790 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	52,717,601 - 52,720,718 (-)	NCBI		T2T-CHM13v2.0

Hsd17b10
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	150,784,892 - 150,787,438 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	150,784,841 - 150,787,438 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	152,001,896 - 152,004,442 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	152,001,845 - 152,004,442 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	148,436,439 - 148,438,985 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	147,342,612 - 147,345,158 (+)	NCBI		MGSCv36	mm8
MGSCv36	X	129,009,142 - 129,011,881 (+)	NCBI		MGSCv36	mm8
Celera	X	132,428,129 - 132,428,679 (-)	NCBI		Celera
Cytogenetic Map	X	F3	NCBI
cM Map	X	68.46	NCBI

Hsd17b10
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	24,568,551 - 24,571,012 (+)	NCBI		GRCr8
mRatBN7.2	X	21,089,142 - 21,091,603 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	21,089,122 - 21,109,488 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	18,566,162 - 18,568,623 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	21,554,941 - 21,557,402 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	21,654,784 - 21,657,245 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	21,696,796 - 21,699,241 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	21,696,772 - 21,699,241 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	21,747,939 - 21,750,384 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	41,489,343 - 41,491,788 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	X	41,542,811 - 41,545,257 (+)	NCBI
Celera	X	21,364,462 - 21,366,907 (+)	NCBI		Celera
Cytogenetic Map	X	q13	NCBI

Hsd17b10
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955475	478,690 - 481,029 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955475	478,690 - 481,029 (-)	NCBI	ChiLan1.0	ChiLan1.0

HSD17B10
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	54,830,436 - 54,833,601 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	54,834,038 - 54,837,229 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	45,645,849 - 45,649,039 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	53,754,164 - 53,757,643 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	53,754,164 - 53,757,643 (-)	Ensembl	panpan1.1		panPan2

HSD17B10
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	45,165,272 - 45,167,683 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	45,165,272 - 45,167,574 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	36,699,189 - 36,701,599 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	45,490,114 - 45,492,524 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	45,490,114 - 45,492,416 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	44,985,267 - 44,987,677 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	45,434,940 - 45,437,350 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	45,502,509 - 45,504,919 (-)	NCBI		UU_Cfam_GSD_1.0

Hsd17b10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	38,060,016 - 38,062,537 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936751	399,701 - 402,344 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936751	399,743 - 402,200 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HSD17B10
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	46,218,548 - 46,220,883 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	46,218,540 - 46,220,942 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	51,717,057 - 51,719,459 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Hsd17b10
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624909	681,731 - 684,237 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624909	681,731 - 684,130 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in HSD17B10
34 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
69	29	17	26	26	60	20


RefSeq Transcripts	XM_007991781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000010640 ⟹ ENSCSAP00000008731

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	X	49,567,267 - 49,571,292 (-)	Ensembl

RefSeq Acc Id:

XM_007991781 ⟹ XP_007989972

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	X	49,568,206 - 49,571,356 (-)	NCBI
Vero_WHO_p1.0	NW_023666086	3,522,557 - 3,525,740 (-)	NCBI

Sequence:

show sequence

CGCCCCTTCCGCCGCTTCGCCTCGGCCAATCAGCGAGCGTCTGCGCCCCCATCCGGTGGAGTGGCCGGCGACAAGATGGCAGCAGCGTGTCGGAGCGTGAAGGGCCTGGTGGCGGTAATAACCGGAGG
AGCCTCGGGCCTGGGCCTGGTTACGGCGGAGCGACTGGTGGGGCAGGGAGCCTCCGCTGTGCTTCTGGACCTGCCCAACTCGGGTGGGGAGGCCCAGGCCAAGAAGTTAGGAAACAACTGCGTTTTCG
CCCCAGCCGACGTGACCTCTGAGAAGGATGTGCAAACAGCTCTGGCTCTAGCAAAAGAAAAGTTTGGCCGTGTGGATGTAGCTGTCAACTGTGCAGGCATCGCGGTGGCTATCAAGACATACAACTTA
AAGAAGAGCCAGGCCCATACCTTGGAAGACTTCCAGCGAGTTCTTAATGTGAATCTCATGGGCACCTTCAATGTGATCCGCCTGGTGGCTGGTGAGATGGGCCAGAATGAACCAGACCAGGGAGGCCA
ACGTGGGGTCATCATCAACACCGCCAGTGTGGCTGCCTTCGAGGGTCAGGTTGGACAAGCTGCATACTCTGCTTCCAAGGGGGGAATAGTGGGCATGACACTGCCCATTGCTCGGGATCTGGCTCCCA
TAGGCATCCGGGTGATGACCATTGCTCCAGGTCTGTTTGGGACCCCACTGCTGACCAGCCTCCCAGAGAAAGTGCGCAACTTCTTGGCCAGCCAAGTGCCCTTTCCTAGCCGACTGGGTGACCCTGCT
GAGTATGCTCACCTGGTACAGGCCATCATCGAGAACCCATTCCTCAATGGAGAGGTCATCCGGCTGGATGGGGCCATTCGTATGCAGCCTTGAAGGGAGAAGGCAGAGAAAACACACGCTCCTCTGCC
CTTCCTTCCCCTGGGGTACTACTCTCCAGCTTGGGAGGAAGCCCAGTAGCAATTTTGTAACTGCCTACCAGTTGTCCTCTGTGCCTAATAAAGTCTCTTTTTCTCATA

hide sequence


Protein RefSeqs	XP_007989972	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000008731
	ENSCSAP00000008731.1

RefSeq Acc Id:	XP_007989972 ⟸ XM_007991781
- UniProtKB:	A0A0D9RJE2 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000008731 ⟸ ENSCSAT00000010640

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000012546	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000010640.1	UniProtKB/TrEMBL
Gene3D-CATH	NAD(P)-binding Rossmann-like Domain	UniProtKB/TrEMBL
InterPro	NAD(P)-bd_dom_sf	UniProtKB/TrEMBL
	Sc_DH/Rdtase_CS	UniProtKB/TrEMBL
	SDR_fam	UniProtKB/TrEMBL
KEGG Report	csab:103232017	UniProtKB/TrEMBL
NCBI Gene	HSD17B10	ENTREZGENE
PANTHER	3-HYDROXYACYL-COA DEHYDROGENASE TYPE-2	UniProtKB/TrEMBL
	SHORT-CHAIN DEHYDROGENASE/REDUCTASE	UniProtKB/TrEMBL
Pfam	adh_short	UniProtKB/TrEMBL
PRINTS	GDHRDH	UniProtKB/TrEMBL
	SDRFAMILY	UniProtKB/TrEMBL
PROSITE	ADH_SHORT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF51735	UniProtKB/TrEMBL
UniProt	A0A0D9RJE2	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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