RNF207 (ring finger protein 207) - Rat Genome Database

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Gene: RNF207 (ring finger protein 207) Chlorocebus sabaeus
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Symbol: RNF207
Name: ring finger protein 207
RGD ID: 18539280
Description: ENCODES a protein that exhibits Hsp70 protein binding (ortholog); protein-folding chaperone binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN positive regulation of gene expression (ortholog); positive regulation of membrane repolarization during ventricular cardiac muscle cell action potential (ortholog); ASSOCIATED WITH chromosome 1p36 deletion syndrome (ortholog); long QT syndrome (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC103225699; LOC103225700; RING finger protein 207-like
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120125,518,231 - 125,530,249 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605429,624,482 - 29,638,653 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RNF207
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120125,518,231 - 125,530,249 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605429,624,482 - 29,638,653 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
RNF207
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3816,206,119 - 6,221,299 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl16,205,475 - 6,221,299 (+)EnsemblGRCh38hg38GRCh38
GRCh3716,266,179 - 6,281,359 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3616,188,776 - 6,203,946 (+)NCBINCBI36Build 36hg18NCBI36
Celera15,380,701 - 5,395,870 (+)NCBICelera
Cytogenetic Map1p36.31NCBI
HuRef15,414,459 - 5,429,630 (+)NCBIHuRef
CHM1_116,254,831 - 6,270,001 (+)NCBICHM1_1
T2T-CHM13v2.015,731,763 - 5,746,943 (+)NCBIT2T-CHM13v2.0
Rnf207
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394152,391,475 - 152,403,686 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4152,391,476 - 152,403,450 (-)EnsemblGRCm39 Ensembl
GRCm384152,307,018 - 152,319,076 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4152,307,019 - 152,318,993 (-)EnsemblGRCm38mm10GRCm38
MGSCv374151,681,132 - 151,692,734 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364151,150,823 - 151,162,408 (-)NCBIMGSCv36mm8
Celera4154,594,355 - 154,605,972 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map483.02NCBI
Rnf207
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85168,098,074 - 168,112,585 (-)NCBIGRCr8
mRatBN7.25162,815,351 - 162,828,325 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5162,815,357 - 162,828,375 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.05169,486,253 - 169,500,451 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5169,486,257 - 169,499,268 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05173,039,837 - 173,054,032 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45169,537,947 - 169,550,915 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5161,046,593 - 161,066,093 (-)NCBICelera
Cytogenetic Map5q36NCBI
RNF207
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21222,003,165 - 222,017,435 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11220,645,979 - 220,658,899 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v014,972,787 - 4,986,992 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.116,228,829 - 6,242,778 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl16,229,241 - 6,242,770 (+)Ensemblpanpan1.1panPan2
RNF207
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1560,105,200 - 60,119,902 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl560,106,297 - 60,118,670 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha560,114,909 - 60,129,921 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0560,320,633 - 60,335,661 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl560,321,442 - 60,335,653 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1560,320,217 - 60,335,203 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0560,187,028 - 60,202,012 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0560,588,433 - 60,603,475 (+)NCBIUU_Cfam_GSD_1.0
Rnf207
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505830,580,768 - 30,596,429 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366231,066,957 - 1,079,030 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366231,065,260 - 1,079,918 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RNF207
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl667,106,552 - 67,116,510 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1667,105,347 - 67,119,167 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2662,013,475 - 62,024,064 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Rnf207
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248185,178,299 - 5,183,610 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248185,176,316 - 5,183,610 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_037985131   ⟹   XP_037841059
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605429,624,482 - 29,638,651 (-)NCBI
RefSeq Acc Id: XM_037985132   ⟹   XP_037841060
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605429,624,482 - 29,638,651 (-)NCBI
RefSeq Acc Id: XM_037985133   ⟹   XP_037841061
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605429,624,482 - 29,638,653 (-)NCBI
Protein Sequences
Protein RefSeqs XP_037841059 (Get FASTA)   NCBI Sequence Viewer  
  XP_037841060 (Get FASTA)   NCBI Sequence Viewer  
  XP_037841061 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_037841061   ⟸   XM_037985133
- Peptide Label: isoform X2
RefSeq Acc Id: XP_037841060   ⟸   XM_037985132
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037841059   ⟸   XM_037985131
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
NCBI Gene LOC103225700 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 RNF207  ring finger protein 207  LOC103225700  RING finger protein 207  Symbol and/or name change 5135510 APPROVED
2020-12-03 LOC103225700  RING finger protein 207  LOC103225699  RING finger protein 207-like  Data merged from RGD:18710268 737654 PROVISIONAL