Advanced Search (OLGA)

Gene: CUNH1orf115 (chromosome unknown C1orf115 homolog) Chlorocebus sabaeus

Subscribe to Updates

Analyze

Symbol:

CUNH1orf115

Name:

chromosome unknown C1orf115 homolog

RGD ID:

18514771

Description:

INVOLVED IN regulation of response to drug (inferred); ASSOCIATED WITH COVID-19 (ortholog); gastrointestinal stromal tumor (ortholog); Loeys-Dietz syndrome 4 (ortholog); FOUND IN 9+0 non-motile cilium (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

C25H1orf115; chromosome 25 open reading frame, human C1orf115; uncharacterized protein C1orf115 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	8,844,455 - 8,853,459 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666055	9,123,440 - 9,132,712 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CUNH1orf115	Green Monkey	COVID-19		ISO	C1orf115 (Homo sapiens)	9068941	mRNA:increased expression:peripheral blood mononuclear cell (human)	RGD	PMID:32228226 and REF_RGD_ID:28912744

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CUNH1orf115	Green Monkey	gastrointestinal stromal tumor		ISO	C1orf115 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Gastrointestinal stromal tumor	ClinVar	PMID:28492532
CUNH1orf115	Green Monkey	Loeys-Dietz syndrome 4		ISO	C1orf115 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Loeys-Dietz syndrome 4	ClinVar	PMID:22772368 and PMID:28544325
CUNH1orf115	Green Monkey	Martsolf Syndrome		ISO	C1orf115 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Martsolf syndrome	ClinVar	PMID:23420520 and PMID:28492532
CUNH1orf115	Green Monkey	parathyroid carcinoma		ISO	C1orf115 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Parathyroid carcinoma	ClinVar	PMID:28492532
CUNH1orf115	Green Monkey	Usher syndrome		ISO	C1orf115 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Usher syndrome	ClinVar	PMID:28041643

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CUNH1orf115	Green Monkey	regulation of response to drug	involved_in	IEA	UniProtKB:Q9H7X2 and ensembl:ENSP00000294889	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CUNH1orf115	Green Monkey	9+0 non-motile cilium	located_in	IEA	UniProtKB:Q9H7X2 and ensembl:ENSP00000294889	150520179		Ensembl	GO_REF:0000107

CUNH1orf115
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	8,844,455 - 8,853,459 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666055	9,123,440 - 9,132,712 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

C1orf115
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	220,690,363 - 220,699,153 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	220,690,363 - 220,699,153 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	220,863,705 - 220,872,495 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	218,930,251 - 218,939,122 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	194,082,992 - 194,091,863 (+)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI
HuRef	1	191,538,249 - 191,547,115 (+)	NCBI		HuRef
CHM1_1	1	222,136,076 - 222,144,946 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	219,930,068 - 219,938,857 (+)	NCBI		T2T-CHM13v2.0

C130074G19Rik
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	184,604,123 - 184,615,233 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	184,604,123 - 184,615,415 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	184,871,926 - 184,883,036 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	184,871,926 - 184,883,218 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	186,695,805 - 186,706,915 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	186,572,714 - 186,583,802 (-)	NCBI		MGSCv36	mm8
Celera	1	191,834,798 - 191,845,748 (-)	NCBI		Celera
Cytogenetic Map	1	H5	NCBI
cM Map	1	89.22	NCBI

C13h1orf115
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	98,953,841 - 98,963,577 (-)	NCBI		GRCr8
mRatBN7.2	13	96,422,308 - 96,432,044 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	96,422,302 - 96,432,068 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	98,928,570 - 98,938,306 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	100,327,408 - 100,337,144 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	97,510,809 - 97,520,545 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	102,780,885 - 102,790,621 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	102,780,877 - 102,790,639 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	107,456,593 - 107,466,329 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	100,875,932 - 100,885,668 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	101,064,974 - 101,093,525 (-)	NCBI
Celera	13	95,939,418 - 95,949,154 (-)	NCBI		Celera
Cytogenetic Map	13	q26	NCBI

CUNH1orf115
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955520	3,064,235 - 3,065,978 (-)	NCBI	ChiLan1.0	ChiLan1.0

C1H1orf115
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	28,700,936 - 28,709,942 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	28,662,763 - 28,671,779 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	196,276,253 - 196,285,549 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	201,311,283 - 201,320,273 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

CUNH1orf115
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	56,326,874 - 56,338,324 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936650	1,575,083 - 1,586,548 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936650	1,575,098 - 1,586,515 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

C10H1orf115
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	10,115,923 - 10,127,714 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	10,115,917 - 10,127,722 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	12,317,346 - 12,329,153 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CUNH1orf115
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624835	4,112,431 - 4,121,013 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in CUNH1orf115
237 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_007988392	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC238857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACDXN010000023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_007988392 ⟹ XP_007986583

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	25	8,844,455 - 8,853,459 (-)	NCBI
Vero_WHO_p1.0	NW_023666055	9,123,440 - 9,132,712 (-)	NCBI

Sequence:

show sequence

TGCAGTTGAAGGTGTTTTGCATGTTCATTGTGCAGTGCACGCTGTAGTCTGCACCCTTTGGCCGGCAGGTGGGATGCAGGGCGGGGCTGGCGGAGCGCACCCGCCGCCTGGGAGGCCAGTTCGAAGCG
GAGTCGCCGCCATCCCGGGCCCCACGGCCAGGGGGCGCTGCGGCCCCCCCAATCCCCCGCCCCGTCTGGGCTGGGGCGGAGGAGCGGGCGGAGAGCAAAGGTTGGTGTCTCTGCGCTCGGACCTTCGC
CAGAGGGGCCGCGGCATCATGACGGTGGGAGCTAGGCTCCGAAGCAAGGCGGAGAGCAGCCTCCTGCGCCGCGGGCCCCGAGGGCGAGGGAGGACCGAGAGGGACGAGGAGGCGGCCGCCATCCTGGA
GCACCTGGAGTACGCCGACGAGGCGGAGGCGGCGGCCGAGAGCGGGGCGAACGCGGCGGTCGAGCGGGGCCCCGGGGCCCGGGGCGCGCGGAGGGTGCACTTCGCACACCTGCCCGAGCGCTACGAGC
TCCTGGAGGAGCCGGCGCCGAGCGAGCAGCCCAAGAAGCGGTACCGGCGGAAGCTGAAGAAGTACGGCAAGAATGTCGGGAAGGTCATCATCAAAGGATGCCGCTACGTGGTCATCGGCCTGCAAGGC
TTCGCTGCAGCCTACTCCGCCCCGTTTGCGGTAGCCACCAGCGTGGTATCCTTTGTGCGCTAATGGGAGCTGCTGCGGCAGGTGCCACCAGAGTGAATGGGAGCCCCTGCTGTGGGAACTTTGTGAAT
CCTGGAGCATCTCAGACTTGAACATACAGCATACTTGGAAGAGAAAACATGCCTTTCTTTGTTGAATCACATTAGTATGATGAATGAGTCATCCCTGCCCATCTGCTGAGCTTCTCACATCTCTCGGT
CACACGTGGATCCAATGGTCAATCCTGCAGCGAATTCGTCCGAGGTTAGGTTTGGGAGTGGAGCTAGTGTGCTAAAGCCAGAGCCTTCACGTGAAGGTGGCAGGCACTGGGGCGGAAGCCGACACGCA
ACAGATCCAAGCAGTGTGGGTGTGCAGCAGAACCGTGATCTTGAGGGGAGGAAGAGGATGTTACTGGAGTCAGATGATTTGCTGTATTCTCCTGAAAGGTCGTAGGCTGACAGGCACTCACATTCCTT
AGCTGCCCTCAGAACTGAGGCAGCTAAGGAGCTGTTTATTCCTCAAGTCGTGCTCCCCAATCTCCTTCTTCTACCACTCTGTCACCAGTTTAATTACAGGCTTGAGAAGAAGGAAGAAAGAAAAGATC
TCTTGATGCTTTGAAAACTGTGTTGGCAGTGTGGCATGACTGTTTAAAGTAGATAAAAGCTTGTCATTTTACCCCATCCCTGCATGACTGTGAAACTGGCGAAGAAGGAGGAAAAAGGGCAAGATTGG
ATGCAGGCTGGGTGGCTAGGACAGGTTGGCCGAGGGGCCACTCTGGAGGGCTCTTGTGCCTGGCATTGCCCACTTCAGCCCAGCCACAAGTTTGCGGCGACCAGAGTCCCTGCAAAGGTGTGGCTGGC
TGTGGTCAGGGCCTACTAGCACCATCAACACACACTCGCCATTGGCTCAGCTCCTCTCCGCCAGTCCAACTAAGAGTGCTTTGTCCTGGGTGGGACATAGGGGCTGAGAGAGATGGGGGGAGACATAA
CACCCAGGAATGAAAATACAGATTTAGAGAAGGAACCAGTAAGTAGGAGACAGATGTGAAGGAAATGGAAACGAGGCAAGAGGATGTTGTAAGAGAGAAGTTGGCCATCCAGGAACCAGTTCTGGAGC
ATCAGTGTCAGGGAGTTCAGATAGGCTGGGCCTGTGCCTCTAGGTAGGGACAAGGGAGGCTGGGTGGCCAGGGCTGGTGCTTAAAACCCCTGAGGCCATGAACTCATTGGCTGCCTTTGTAGCATCTT
TTCTTCTTCTGTGCTGCCCAGTTTGACCTCATCTCACCTGGATTCAAAGGGTAGGGTGGGCATGGGTCTTGGGCCTGACACCCCCCAAGGATGACCTGTGGACTGCCATGGGACGCTGAACAGGGAGA
TGAAAGAAAGGAGGTCCTCTTACCATACCCCTCTGCCAACCCCCCATAGGCCACTGTTCTGACTTTGTTTCCAGAATATCCAGAAATCCAAAGGGGCTGTTGCTGAACAGTCTGCAGGATCAGTGACA
GCACCTATGGGTTGTCCCAAGGCATAAAAGGGAGGCCTCAACACTGATGCTTCTCTGATCAAGCCCGGCCAAGCCCAGACAGAAAGACAGACAGAAAAAAGGAAGGGGTAGAGGAGAAGGTTGAAGCT
GTGAAGCTAGACTGCACTTCACTTTCTGAAGCTTCAACTTCATGTTGAAGATTCACTGGGAGCCAATTCCTGCCTTGTTAATATTTGTGAGGAAAAGCAAAACAAGTGATCTGGTTTTAGCCCAGATG
ATGAAAGTGGATACAGCACATTTTCACACATGTGAGATCATTATAGCTTGCCCCACAACACTGGGTGTCGGAGAAAGGGAGAGAGAGACATAAGTGGAAGAAAAAGCCAAGCATAGTGAGTGGGAAAA
AGAGTGAGAGCCTGTGAGGGCTGCTGACGAGCCCCAGGCAGCCCACAAGTTCCTCGTGGGGAGATGGAGGCAGAGCCCAGGGCAGGGGACAGCTGCTGGGGCCTTTCCTTGCCTGGGAGTCTGTCCCA
GGAAGAGCTTCCCCACTCCCATCCCCCAAATTGGAAAAACTGTGTAGTCAAGCCTGTTTGGCCCTGAAATTCTTAAGAATCTGGTTAAGAATTAACTCAGTAATGTCAAAAGTCAAAACCTCCTAGGG
GTTGTCCTGGGAGTCAGGTTCATGGGTACAGAAGATGAATCTCAGACATCACTCAGCCTGAGCTGTCATTCTCTGTGACAGCGCTGCCCTGGGTTTCTCTTACTCAGTTCCTGGAGTGTAAGCATTTG
GATCATGTCACAGATTACCTTTTTACCTTTTCTGTCTCTTTTTTTTTTTTTTTTTAAGTATCAGTGCCCACACCTTACTGAGTATTGAGTTTTAGAGCTTTCGCTTGATGTGCTTGACCAAGAGACTT
CTTTTGTATCCTTTTCTTGTCCTATGATGTAAATAAAAGCCTCAATTTATGTAATGTTTCTGGCA

hide sequence


Protein RefSeqs	XP_007986583	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000011942.1

RefSeq Acc Id:	XP_007986583 ⟸ XM_007988392
- UniProtKB:	A0A0D9RTK3 (UniProtKB/TrEMBL)

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000015864	UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000013960.1	UniProtKB/TrEMBL
InterPro	RDD1	UniProtKB/TrEMBL
NCBI Gene	C25H1orf115	ENTREZGENE
PANTHER	SI:DKEY-126G1.9-RELATED	UniProtKB/TrEMBL
	SI:DKEY-126G1.9-RELATED	UniProtKB/TrEMBL
Pfam	DUF4710	UniProtKB/TrEMBL
UniProt	A0A0D9RTK3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-12-08	CUNH1orf115	chromosome unknown C1orf115 homolog	C25H1orf115	chromosome 25 open reading frame, human C1orf115	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
		Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Send us a Message

Imported Disease Annotations - ClinVar