Symbol:
ZCCHC17
Name:
zinc finger CCHC-type containing 17
RGD ID:
1604815
HGNC Page
HGNC:30246
Description:
Enables identical protein binding activity. Predicted to be involved in RNA stabilization. Predicted to be located in nucleolus. Predicted to be part of cytosolic large ribosomal subunit.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
HSPC251; nucleolar protein 40; nucleolar protein of 40 kDa; pnn-interacting nucleolar protein; pNO40; PS1D; putative S1 RNA binding domain protein; putative S1 RNA-binding domain protein; RP11-266K22.1; zinc finger CCHC domain-containing protein 17; zinc finger, CCHC domain containing 17
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Mus musculus (house mouse):
Zcchc17 (zinc finger, CCHC domain containing 17)
HGNC
Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB
Rattus norvegicus (Norway rat):
Zcchc17 (zinc finger CCHC-type containing 17)
HGNC
Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Chinchilla lanigera (long-tailed chinchilla):
Zcchc17 (zinc finger CCHC-type containing 17)
NCBI
Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):
ZCCHC17 (zinc finger CCHC-type containing 17)
NCBI
Ortholog
Canis lupus familiaris (dog):
ZCCHC17 (zinc finger CCHC-type containing 17)
HGNC
EggNOG, Ensembl, HomoloGene, NCBI, OMA, OrthoDB, Panther, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Zcchc17 (zinc finger CCHC-type containing 17)
NCBI
Ortholog
Sus scrofa (pig):
ZCCHC17 (zinc finger CCHC-type containing 17)
HGNC
Ensembl, NCBI, OrthoDB
Chlorocebus sabaeus (green monkey):
ZCCHC17 (zinc finger CCHC-type containing 17)
NCBI
Ortholog
Heterocephalus glaber (naked mole-rat):
Zcchc17 (zinc finger CCHC-type containing 17)
NCBI
Ortholog
Other homologs 2
Canis lupus familiaris (dog):
LOC100683619 (nucleolar protein of 40 kDa-like)
HGNC
Ensembl
Alliance orthologs 3
Mus musculus (house mouse):
Zcchc17 (zinc finger, CCHC domain containing 17)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Rattus norvegicus (Norway rat):
Zcchc17 (zinc finger CCHC-type containing 17)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
zcchc17 (zinc finger, CCHC domain containing 17)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid|ZFIN)
Xenopus tropicalis (tropical clawed frog):
zcchc17
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB)
Xenopus laevis (African clawed frog):
zcchc17.L
Alliance
DIOPT (Xenbase)
Allele / Splice:
See ClinVar data
Latest Assembly:
GRCh38 - Human Genome Assembly GRCh38
Position:
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 31,297,032 - 31,364,936 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 31,296,982 - 31,364,953 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 31,769,879 - 31,837,783 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 31,542,429 - 31,610,367 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 1 30,026,341 - 30,094,350 (+) NCBI Celera Cytogenetic Map 1 p35.2 NCBI HuRef 1 29,876,542 - 29,944,556 (+) NCBI HuRef CHM1_1 1 31,885,748 - 31,953,687 (+) NCBI CHM1_1 T2T-CHM13v2.0 1 31,149,209 - 31,217,206 (+) NCBI T2T-CHM13v2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
ZCCHC17 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 31,297,032 - 31,364,936 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 31,296,982 - 31,364,953 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 31,769,879 - 31,837,783 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 31,542,429 - 31,610,367 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 1 30,026,341 - 30,094,350 (+) NCBI Celera Cytogenetic Map 1 p35.2 NCBI HuRef 1 29,876,542 - 29,944,556 (+) NCBI HuRef CHM1_1 1 31,885,748 - 31,953,687 (+) NCBI CHM1_1 T2T-CHM13v2.0 1 31,149,209 - 31,217,206 (+) NCBI T2T-CHM13v2.0
Zcchc17 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 4 130,209,176 - 130,253,785 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 4 130,209,176 - 130,253,736 (-) Ensembl GRCm39 Ensembl GRCm38 4 130,315,383 - 130,359,992 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 4 130,315,383 - 130,359,943 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 4 129,993,329 - 130,037,190 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 4 129,818,205 - 129,840,890 (-) NCBI MGSCv36 mm8 Celera 4 128,649,036 - 128,692,835 (-) NCBI Celera Cytogenetic Map 4 D2.2 NCBI cM Map 4 63.43 NCBI
Zcchc17 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 147,942,789 - 147,984,596 (-) NCBI GRCr8 mRatBN7.2 5 142,658,626 - 142,700,440 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 142,658,589 - 142,700,426 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 145,357,901 - 145,399,693 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 147,127,707 - 147,169,498 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 147,125,098 - 147,166,475 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 148,535,519 - 148,577,315 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 148,535,519 - 148,577,292 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 152,252,914 - 152,294,538 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 149,347,190 - 149,388,386 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 5 141,125,063 - 141,166,773 (-) NCBI Celera Cytogenetic Map 5 q36 NCBI
Zcchc17 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955452 9,793,264 - 9,850,396 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955452 9,793,264 - 9,850,396 (+) NCBI ChiLan1.0 ChiLan1.0
ZCCHC17 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 195,468,411 - 195,536,665 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 194,587,456 - 194,655,395 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 30,576,876 - 30,645,156 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 31,597,190 - 31,665,371 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 31,597,212 - 31,665,373 (+) Ensembl panpan1.1 panPan2
ZCCHC17 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 2 69,659,152 - 69,720,942 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 2 66,237,619 - 66,300,042 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 2 70,223,407 - 70,285,922 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 2 70,223,408 - 70,285,234 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 2 67,059,336 - 67,121,725 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 2 68,056,026 - 68,118,431 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 2 69,055,592 - 69,118,094 (-) NCBI UU_Cfam_GSD_1.0
Zcchc17 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405058 48,700,222 - 48,751,137 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936474 14,525,019 - 14,576,648 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936474 14,525,043 - 14,576,627 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
ZCCHC17 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 6 87,879,830 - 87,942,014 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 6 87,879,727 - 87,942,857 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 6 81,586,425 - 81,631,241 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
ZCCHC17 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 101,472,935 - 101,540,741 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 101,473,694 - 101,540,704 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666033 15,133,560 - 15,201,983 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Zcchc17 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 1538 Count of miRNA genes: 614 Interacting mature miRNAs: 703 Transcripts: ENST00000344147, ENST00000373714, ENST00000422613, ENST00000479629, ENST00000490049, ENST00000546109 Prediction methods: Microtar, Miranda, Rnahybrid Result types: miRGate_prediction
1576329 MYI9_H Myocardial infarction susceptibility QTL 9 (human) 12 Myocardial infarction susceptibility early-onset 1 7585503 33585503 Human 597205154 GWAS1301228_H protein measurement QTL GWAS1301228 (human) 6e-10 protein measurement 1 31330095 31330096 Human 597345606 GWAS1441680_H color vision disorder QTL GWAS1441680 (human) 0.0000007 color vision disorder 1 31323507 31323508 Human 1576325 MYI1_H Myocardial infarction susceptibility QTL 1 (human) 11.68 1e-12 Myocardial infarction susceptibility early-onset 1 7585503 33585503 Human 1643380 BW316_H Body weight QTL 316 (human) 2.62 0.0002 Body weight BMI 1 7585503 33585503 Human 597213861 GWAS1309935_H protein measurement QTL GWAS1309935 (human) 1e-08 protein measurement 1 31330095 31330096 Human 597094376 GWAS1190450_H schizophrenia QTL GWAS1190450 (human) 0.000004 schizophrenia 1 31359023 31359024 Human 597141065 GWAS1237139_H urinary microalbumin measurement QTL GWAS1237139 (human) 4e-08 urine albumin amount (VT:0002871) urine albumin level (CMO:0000130) 1 31360523 31360524 Human
SHGC-74490
Human Assembly Chr Position (strand) Source JBrowse GRCh37 1 31,828,445 - 31,828,687 UniSTS GRCh37 Build 36 1 31,601,032 - 31,601,274 RGD NCBI36 Celera 1 30,085,015 - 30,085,257 RGD Cytogenetic Map 1 p35.2 UniSTS HuRef 1 29,935,221 - 29,935,463 UniSTS TNG Radiation Hybrid Map 1 14825.0 UniSTS GeneMap99-GB4 RH Map 1 94.52 UniSTS NCBI RH Map 1 142.5 UniSTS
D1S1430
Human Assembly Chr Position (strand) Source JBrowse GRCh37 1 31,835,644 - 31,835,834 UniSTS GRCh37 Build 36 1 31,608,231 - 31,608,421 RGD NCBI36 Celera 1 30,092,214 - 30,092,404 RGD Cytogenetic Map 1 p35.2 UniSTS HuRef 1 29,942,420 - 29,942,610 UniSTS
SHGC-143051
Human Assembly Chr Position (strand) Source JBrowse GRCh37 1 31,799,709 - 31,800,003 UniSTS GRCh37 Build 36 1 31,572,296 - 31,572,590 RGD NCBI36 Celera 1 30,056,207 - 30,056,501 RGD Cytogenetic Map 1 p35.2 UniSTS HuRef 1 29,906,405 - 29,906,699 UniSTS TNG Radiation Hybrid Map 1 14809.0 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
entire extraembryonic component
1204
2439
2788
2253
4974
1726
2351
6
624
1951
465
2270
7306
6472
53
3734
1
852
1744
1617
175
1
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENST00000344147 ⟹ ENSP00000343557
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 1 31,297,032 - 31,364,936 (+) Ensembl
Ensembl Acc Id:
ENST00000373714 ⟹ ENSP00000362819
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 1 31,297,008 - 31,364,936 (+) Ensembl
Ensembl Acc Id:
ENST00000479629
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 1 31,296,998 - 31,348,968 (+) Ensembl
Ensembl Acc Id:
ENST00000546109 ⟹ ENSP00000444742
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 1 31,296,982 - 31,364,953 (+) Ensembl
Ensembl Acc Id:
ENST00000615916 ⟹ ENSP00000480986
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 1 31,296,982 - 31,364,953 (+) Ensembl
Ensembl Acc Id:
ENST00000616393 ⟹ ENSP00000482122
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 1 31,296,982 - 31,364,953 (+) Ensembl
Ensembl Acc Id:
ENST00000616859 ⟹ ENSP00000481743
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 1 31,296,982 - 31,364,953 (+) Ensembl
Ensembl Acc Id:
ENST00000618216 ⟹ ENSP00000481299
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 1 31,296,982 - 31,364,953 (+) Ensembl
Ensembl Acc Id:
ENST00000627541 ⟹ ENSP00000486079
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 1 31,297,036 - 31,364,552 (+) Ensembl
RefSeq Acc Id:
NM_001282566 ⟹ NP_001269495
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 31,297,032 - 31,364,936 (+) NCBI HuRef 1 29,876,529 - 29,944,576 (+) NCBI CHM1_1 1 31,885,735 - 31,953,707 (+) NCBI T2T-CHM13v2.0 1 31,149,254 - 31,217,206 (+) NCBI
Sequence:
GTTTAGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGTACGTATGAGGAAGAACGGGGTGGGTGGCTGCCTGAGTCTGGAGGCGACGCCTCGGTTGTGCAGTCTGAACCTGCCCTTCTCA GCTGAGGGTGCTGACAGCAAGGGGTGGGAGGCGGGCCCCGAGTCCCCAGCTGTGGTTGCTATGGTGACAGACTATGGGGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAAC TCATATGTCATCCTGTCGGGTGGATAAGCCCTCTGAGATAGTAGATGTTGGAGATAAAGTGTGGGTGAAGCTTATTGGCCGAGAGATGAAAAATGATAGAATAAAAGTATCCCTCTCCATGAAGGTTG TCAATCAAGGGACTGGGAAAGACCTTGATCCCAACAATGTTATCATTGAGCAAGAAGAGAGGCGGAGGCGATCCTTCCAGGATTACACTGGGCAGAAGATCACCCTTGAGGCTGTCTTGAACACTACC TGCAAGAAGTGTGGCTGTAAAGGCCACTTTGCAAAAGATTGTTTCATGCAACCAGGTGGGACTAAATACTCTCTGATACCTGATGAGGAAGAGGAAAAGGAAGAGGCAAAGTCAGCAGAGTTTGAGAA GCCTGACCCTACAAGGAATCCTTCTAGAAAAAGAAAGAAGGAGAAGAAGAAAAAGAAACATAGAGATAGGAAGTCATCTGACTCTGACAGCTCAGACTCTGAGAGTGATACAGGCAAGAGGGCAAGGC ACACATCAAAAGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAGTGAGAGTATAAAGAGTGTAGGGGGTGGTTGAGAGTAAGAAACCAGGAGCCTTGTGCC TTGAGACTCCTGGAAAGACTCAATAGTGAGAATATAGCCTCCCACCCCATTAACTTCGCTCCCATGGGAGATGGCTTCCCCTCATGCAACAGGCAGGTTTGGGAGTTAGAGGTCAAAAGCAGCTGCCT GAATGAGTTGTTGTTTCCTTATCACTCCTGGTCCCTTTGCAAGTGAACCCTGCAGCTCACCCATTCATTCACCCAACTTCCTTCATTCAGCAGGAGGTCCTATTACCCTCTCCAGCTGCCACTGCCAG AGCTGGATTCCTGTAAAGGAGTCCAGGCTAGAGCCACAGAGACTGTTGTGGAGGTGAGTTCGGCTGTAGTTAGAGTGATTGGACCCTTCCTATTGGTCTGTCCTGGGCCAACTGGTGGGTGATCTCTG CTGCATCCAACATGGGAGCAGAGACTGGCAGCAGGAGGGGGGAACATGGTGAGAAGTGGTGCTCACTTTTCCCATTCCTCCTAACATAGTTCTACTATGCTAGAAGTGGCATCCAGCGGCCACAGCTA GAAAACAGTCTGCAGTGTGACTTAACTTGTGTATTGCATTCCAGCAGACCACTGAACCAGACAGCGAAGCCAAGATCATTGTTCTACTTTGTATTTACTACTGTGTGAATCAGTTGATTCTACTTCAG GTCCTTGCTTAAATTCCTGTCACTAAATGGAAATGTGTTTGGTTTTAAA
hide sequence
RefSeq Acc Id:
NM_001282567 ⟹ NP_001269496
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 31,297,032 - 31,364,936 (+) NCBI HuRef 1 29,876,529 - 29,944,576 (+) NCBI CHM1_1 1 31,885,735 - 31,953,707 (+) NCBI T2T-CHM13v2.0 1 31,149,254 - 31,217,206 (+) NCBI
Sequence:
GTTTAGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGTTGCTATGGTGACAGACTA TGGGGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCATATGTCATCCTGTCGGGTGGATAAGCCCTCTGAGATAGTAGATGTTGGAGATAAAGTGTGGGTGAAGCTTA TTGGCCGAGAGATGAAAAATGATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCAAGGGACTGGGAAAGACCTTGATCCCAACAATGTTATCATTGAGCAAGAAGAGAGGCGGAGGCGATCC TTCCAGGATTACACTGGGCAGAAGATCACCCTTGAGGCTGTCTTGAACACTACCTGCAAGAAGTGTGGCTGTAAAGGTAGGGTGAAGCCTCTGCCCTTTCCACGTTTCTCTCCTTGTGGATGGACCCT TTTCTGGAAGAAGGAGGCAGCCCAGTGCCACTTTGCAAAAGATTGTTTCATGCAACCAGGTGGGACTAAATACTCTCTGATACCTGATGAGGAAGAGGAAAAGGAAGAGGCAAAGTCAGCAGAGTTTG AGAAGCCTGACCCTACAAGGAATCCTTCTAGAAAAAGAAAGAAGGAGAAGAAGAAAAAGAAACATAGAGATAGGAAGTCATCTGACTCTGACAGCTCAGACTCTGAGAGTGATACAGGCAAGAGGGCA AGGCACACATCAAAAGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAGTGAGAGTATAAAGAGTGTAGGGGGTGGTTGAGAGTAAGAAACCAGGAGCCTTG TGCCTTGAGACTCCTGGAAAGACTCAATAGTGAGAATATAGCCTCCCACCCCATTAACTTCGCTCCCATGGGAGATGGCTTCCCCTCATGCAACAGGCAGGTTTGGGAGTTAGAGGTCAAAAGCAGCT GCCTGAATGAGTTGTTGTTTCCTTATCACTCCTGGTCCCTTTGCAAGTGAACCCTGCAGCTCACCCATTCATTCACCCAACTTCCTTCATTCAGCAGGAGGTCCTATTACCCTCTCCAGCTGCCACTG CCAGAGCTGGATTCCTGTAAAGGAGTCCAGGCTAGAGCCACAGAGACTGTTGTGGAGGTGAGTTCGGCTGTAGTTAGAGTGATTGGACCCTTCCTATTGGTCTGTCCTGGGCCAACTGGTGGGTGATC TCTGCTGCATCCAACATGGGAGCAGAGACTGGCAGCAGGAGGGGGGAACATGGTGAGAAGTGGTGCTCACTTTTCCCATTCCTCCTAACATAGTTCTACTATGCTAGAAGTGGCATCCAGCGGCCACA GCTAGAAAACAGTCTGCAGTGTGACTTAACTTGTGTATTGCATTCCAGCAGACCACTGAACCAGACAGCGAAGCCAAGATCATTGTTCTACTTTGTATTTACTACTGTGTGAATCAGTTGATTCTACT TCAGGTCCTTGCTTAAATTCCTGTCACTAAATGGAAATGTGTTTGGTTTTAAA
hide sequence
RefSeq Acc Id:
NM_001282568 ⟹ NP_001269497
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 31,297,032 - 31,364,936 (+) NCBI HuRef 1 29,876,529 - 29,944,576 (+) NCBI CHM1_1 1 31,885,735 - 31,953,707 (+) NCBI T2T-CHM13v2.0 1 31,149,254 - 31,217,206 (+) NCBI
Sequence:
GTTTAGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGTACGTATGAGGAAGAACGG GGTGGGTGGCTGCCTGAGTCTGGAGGCGACGCCTCGGTTGTGCAGTCTGAACCTGCCCTTCTCAGCTGAGGGTGCTGACAGCAAGGGGTGGGAGGCGGGCCCCGAGTCCCCAGCTGTGGACACTTGTA TTAGCTTTAATAGAAGAGAAATGGAGGAGCCATAGAATATTAAGGATGAATTCAGGAAGGCCTGAGACCATGGAAAACTTGCCTGCTCTCTACACTATTTTCCAAGGAGAGGTTGCTATGGTGACAGA CTATGGGGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCATATGTCATCCTGTCGGGTGGATAAGCCCTCTGAGATAGTAGATGTTGGAGATAAAGTGTGGGTGAAGC TTATTGGCCGAGAGATGAAAAATGATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCAAGGGACTGGGAAAGACCTTGATCCCAACAATGTTATCATTGAGCAAGAAGAGAGGCGGAGGCGA TCCTTCCAGGATTACACTGGGCAGAAGATCACCCTTGAGGCTGTCTTGAACACTACCTGCAAGAAGTGTGGCTGTAAAGGCCACTTTGCAAAAGATTGTTTCATGCAACCAGGTGGGACTAAATACTC TCTGATACCTGATGAGGAAGAGGAAAAGGAAGAGGCAAAGTCAGCAGAGTTTGAGAAGCCTGACCCTACAAGGAATCCTTCTAGAAAAAGAAAGAAGGAGAAGAAGAAAAAGAAACATAGAGATAGGA AGTCATCTGACTCTGACAGCTCAGACTCTGAGAGTGATACAGGCAAGAGGGCAAGGCACACATCAAAAGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAG TGAGAGTATAAAGAGTGTAGGGGGTGGTTGAGAGTAAGAAACCAGGAGCCTTGTGCCTTGAGACTCCTGGAAAGACTCAATAGTGAGAATATAGCCTCCCACCCCATTAACTTCGCTCCCATGGGAGA TGGCTTCCCCTCATGCAACAGGCAGGTTTGGGAGTTAGAGGTCAAAAGCAGCTGCCTGAATGAGTTGTTGTTTCCTTATCACTCCTGGTCCCTTTGCAAGTGAACCCTGCAGCTCACCCATTCATTCA CCCAACTTCCTTCATTCAGCAGGAGGTCCTATTACCCTCTCCAGCTGCCACTGCCAGAGCTGGATTCCTGTAAAGGAGTCCAGGCTAGAGCCACAGAGACTGTTGTGGAGGTGAGTTCGGCTGTAGTT AGAGTGATTGGACCCTTCCTATTGGTCTGTCCTGGGCCAACTGGTGGGTGATCTCTGCTGCATCCAACATGGGAGCAGAGACTGGCAGCAGGAGGGGGGAACATGGTGAGAAGTGGTGCTCACTTTTC CCATTCCTCCTAACATAGTTCTACTATGCTAGAAGTGGCATCCAGCGGCCACAGCTAGAAAACAGTCTGCAGTGTGACTTAACTTGTGTATTGCATTCCAGCAGACCACTGAACCAGACAGCGAAGCC AAGATCATTGTTCTACTTTGTATTTACTACTGTGTGAATCAGTTGATTCTACTTCAGGTCCTTGCTTAAATTCCTGTCACTAAATGGAAATGTGTTTGGTTTTAAA
hide sequence
RefSeq Acc Id:
NM_001282569 ⟹ NP_001269498
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 31,297,032 - 31,364,936 (+) NCBI HuRef 1 29,876,529 - 29,944,576 (+) NCBI CHM1_1 1 31,885,735 - 31,953,707 (+) NCBI T2T-CHM13v2.0 1 31,149,254 - 31,217,206 (+) NCBI
Sequence:
GTTTAGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGACACTTGTATTAGCTTTAATAGAAGAGAAATGGAGGAGCCATAGAATATTAAGGATGAATTCAGGAAGGCCTGAGACCATGGA AAACTTGCCTGCTCTCTACACTATTTTCCAAGGAGAGTTATGGTGAAGCTGAAACAGTGCTCAAGATGAAGCAGCTAATTGAAGACACTGAAAAGAATAAAGTTTATGTTGCTATGGTGACAGACTAT GGGGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCATATGTCATCCTGTCGGGTGGATAAGCCCTCTGAGATAGTAGATGTTGGAGATAAAGTGTGGGTGAAGCTTAT TGGCCGAGAGATGAAAAATGATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCAAGGGACTGGGAAAGACCTTGATCCCAACAATGTTATCATTGAGCAAGAAGAGAGGCGGAGGCGATCCT TCCAGGATTACACTGGGCAGAAGATCACCCTTGAGGCTGTCTTGAACACTACCTGCAAGAAGTGTGGCTGTAAAGGCCACTTTGCAAAAGATTGTTTCATGCAACCAGGTGGGACTAAATACTCTCTG ATACCTGATGAGGAAGAGGAAAAGGAAGAGGCAAAGTCAGCAGAGTTTGAGAAGCCTGACCCTACAAGGAATCCTTCTAGAAAAAGAAAGAAGGAGAAGAAGAAAAAGAAACATAGAGATAGGAAGTC ATCTGACTCTGACAGCTCAGACTCTGAGAGTGATACAGGCAAGAGGGCAAGGCACACATCAAAAGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAGTGAG AGTATAAAGAGTGTAGGGGGTGGTTGAGAGTAAGAAACCAGGAGCCTTGTGCCTTGAGACTCCTGGAAAGACTCAATAGTGAGAATATAGCCTCCCACCCCATTAACTTCGCTCCCATGGGAGATGGC TTCCCCTCATGCAACAGGCAGGTTTGGGAGTTAGAGGTCAAAAGCAGCTGCCTGAATGAGTTGTTGTTTCCTTATCACTCCTGGTCCCTTTGCAAGTGAACCCTGCAGCTCACCCATTCATTCACCCA ACTTCCTTCATTCAGCAGGAGGTCCTATTACCCTCTCCAGCTGCCACTGCCAGAGCTGGATTCCTGTAAAGGAGTCCAGGCTAGAGCCACAGAGACTGTTGTGGAGGTGAGTTCGGCTGTAGTTAGAG TGATTGGACCCTTCCTATTGGTCTGTCCTGGGCCAACTGGTGGGTGATCTCTGCTGCATCCAACATGGGAGCAGAGACTGGCAGCAGGAGGGGGGAACATGGTGAGAAGTGGTGCTCACTTTTCCCAT TCCTCCTAACATAGTTCTACTATGCTAGAAGTGGCATCCAGCGGCCACAGCTAGAAAACAGTCTGCAGTGTGACTTAACTTGTGTATTGCATTCCAGCAGACCACTGAACCAGACAGCGAAGCCAAGA TCATTGTTCTACTTTGTATTTACTACTGTGTGAATCAGTTGATTCTACTTCAGGTCCTTGCTTAAATTCCTGTCACTAAATGGAAATGTGTTTGGTTTTAAA
hide sequence
RefSeq Acc Id:
NM_001282570 ⟹ NP_001269499
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 31,297,032 - 31,364,936 (+) NCBI HuRef 1 29,876,529 - 29,944,576 (+) NCBI CHM1_1 1 31,885,735 - 31,953,707 (+) NCBI T2T-CHM13v2.0 1 31,149,254 - 31,217,206 (+) NCBI
Sequence:
GTTTAGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGTTGCTATGGTGACAGACTATGGGGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCATATGTCA TCCTGTCGGGTGGATAAGCCCTCTGAGATAGTAGATGTTGGAGATAAAGTGTGGGTGAAGCTTATTGGCCGAGAGATGAAAAATGATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCAAGG GACTGGGAAAGACCTTGATCCCAACAATGTTATCATTGAGCAAGAAGAGAGGCGGAGGCGATCCTTCCAGGATTACACTGGGCAGAAGATCACCCTTGAGGCTGTCTTGAACACTACCTGCAAGAAGT GTGGCTGTAAAGGCCACTTTGCAAAAGATTGTTTCATGCAACCAGGTGGGACTAAATACTCTCTGATACCTGATGAGGAAGAGGAAAAGGAAGAGGCAAAGTCAGCAGAGTTTGAGAAGCCTGACCCT ACAAGGAATCCTTCTAGAAAAAGAAAGAAGGAGAAGAAGAAAAAGAAACATAGAGATAGGAAGTCATCTGACTCTGACAGCTCAGACTCTGAGAGTGATACAGGCAAGAGGGCAAGGCACACATCAAA AGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAGTGAGAGTATAAAGAGTGTAGGGGGTGGTTGAGAGTAAGAAACCAGGAGCCTTGTGCCTTGAGACTCC TGGAAAGACTCAATAGTGAGAATATAGCCTCCCACCCCATTAACTTCGCTCCCATGGGAGATGGCTTCCCCTCATGCAACAGGCAGGTTTGGGAGTTAGAGGTCAAAAGCAGCTGCCTGAATGAGTTG TTGTTTCCTTATCACTCCTGGTCCCTTTGCAAGTGAACCCTGCAGCTCACCCATTCATTCACCCAACTTCCTTCATTCAGCAGGAGGTCCTATTACCCTCTCCAGCTGCCACTGCCAGAGCTGGATTC CTGTAAAGGAGTCCAGGCTAGAGCCACAGAGACTGTTGTGGAGGTGAGTTCGGCTGTAGTTAGAGTGATTGGACCCTTCCTATTGGTCTGTCCTGGGCCAACTGGTGGGTGATCTCTGCTGCATCCAA CATGGGAGCAGAGACTGGCAGCAGGAGGGGGGAACATGGTGAGAAGTGGTGCTCACTTTTCCCATTCCTCCTAACATAGTTCTACTATGCTAGAAGTGGCATCCAGCGGCCACAGCTAGAAAACAGTC TGCAGTGTGACTTAACTTGTGTATTGCATTCCAGCAGACCACTGAACCAGACAGCGAAGCCAAGATCATTGTTCTACTTTGTATTTACTACTGTGTGAATCAGTTGATTCTACTTCAGGTCCTTGCTT AAATTCCTGTCACTAAATGGAAATGTGTTTGGTTTTAAA
hide sequence
RefSeq Acc Id:
NM_001282571 ⟹ NP_001269500
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 31,297,032 - 31,364,936 (+) NCBI HuRef 1 29,876,529 - 29,944,576 (+) NCBI CHM1_1 1 31,885,735 - 31,953,707 (+) NCBI T2T-CHM13v2.0 1 31,149,254 - 31,217,206 (+) NCBI
Sequence:
GTTTAGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGACACTTGTATTAGCTTTAA TAGAAGAGAAATGGAGGAGCCATAGAATATTAAGGATGAATTCAGGAAGGCCTGAGACCATGGAAAACTTGCCTGCTCTCTACACTATTTTCCAAGGAGAGGTTGCTATGGTGACAGACTATGGGGCC TTTATCAAAATCCCAGGCTGTCGGAAGCAAGATGAAAAATGATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCAAGGGACTGGGAAAGACCTTGATCCCAACAATGTTATCATTGAGCAAG AAGAGAGGCGGAGGCGATCCTTCCAGGATTACACTGGGCAGAAGATCACCCTTGAGGCTGTCTTGAACACTACCTGCAAGAAGTGTGGCTGTAAAGGCCACTTTGCAAAAGATTGTTTCATGCAACCA GGTGGGACTAAATACTCTCTGATACCTGATGAGGAAGAGGAAAAGGAAGAGGCAAAGTCAGCAGAGTTTGAGAAGCCTGACCCTACAAGGAATCCTTCTAGAAAAAGAAAGAAGGAGAAGAAGAAAAA GAAACATAGAGATAGGAAGTCATCTGACTCTGACAGCTCAGACTCTGAGAGTGATACAGGCAAGAGGGCAAGGCACACATCAAAAGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACA AGAAGAAGCACAAGGAGTGAGAGTATAAAGAGTGTAGGGGGTGGTTGAGAGTAAGAAACCAGGAGCCTTGTGCCTTGAGACTCCTGGAAAGACTCAATAGTGAGAATATAGCCTCCCACCCCATTAAC TTCGCTCCCATGGGAGATGGCTTCCCCTCATGCAACAGGCAGGTTTGGGAGTTAGAGGTCAAAAGCAGCTGCCTGAATGAGTTGTTGTTTCCTTATCACTCCTGGTCCCTTTGCAAGTGAACCCTGCA GCTCACCCATTCATTCACCCAACTTCCTTCATTCAGCAGGAGGTCCTATTACCCTCTCCAGCTGCCACTGCCAGAGCTGGATTCCTGTAAAGGAGTCCAGGCTAGAGCCACAGAGACTGTTGTGGAGG TGAGTTCGGCTGTAGTTAGAGTGATTGGACCCTTCCTATTGGTCTGTCCTGGGCCAACTGGTGGGTGATCTCTGCTGCATCCAACATGGGAGCAGAGACTGGCAGCAGGAGGGGGGAACATGGTGAGA AGTGGTGCTCACTTTTCCCATTCCTCCTAACATAGTTCTACTATGCTAGAAGTGGCATCCAGCGGCCACAGCTAGAAAACAGTCTGCAGTGTGACTTAACTTGTGTATTGCATTCCAGCAGACCACTG AACCAGACAGCGAAGCCAAGATCATTGTTCTACTTTGTATTTACTACTGTGTGAATCAGTTGATTCTACTTCAGGTCCTTGCTTAAATTCCTGTCACTAAATGGAAATGTGTTTGGTTTTAAA
hide sequence
RefSeq Acc Id:
NM_001282572 ⟹ NP_001269501
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 31,297,032 - 31,364,936 (+) NCBI HuRef 1 29,876,529 - 29,944,576 (+) NCBI CHM1_1 1 31,885,735 - 31,953,707 (+) NCBI T2T-CHM13v2.0 1 31,149,254 - 31,217,206 (+) NCBI
Sequence:
GTTTAGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGACACTTGTATTAGCTTTAATAGAAGAGAAATGGAGGAGCCATAGAATATTAAGGATGAATTCAGGAAGGCCTGAGACCATGGA AAACTTGCCTGCTCTCTACACTATTTTCCAAGGAGAGGTTGCTATGGTGACAGACTATGGGGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCATATGTCATCCTGTC GGGTGGATAAGCCCTCTGAGATAGTAGATGTTGGAGATAAAGTGTGGGTGAAGCTTATTGGCCGAGAGATGAAAAATGATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCAAGGGACTGGG AAAGACCTTGATCCCAACAATGTTATCATTGAGAGAAGAAGAAAAAGAAACATAGAGATAGGAAGTCATCTGACTCTGACAGCTCAGACTCTGAGAGTGATACAGGCAAGAGGGCAAGGCACACATCA AAAGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAGTGAGAGTATAAAGAGTGTAGGGGGTGGTTGAGAGTAAGAAACCAGGAGCCTTGTGCCTTGAGACT CCTGGAAAGACTCAATAGTGAGAATATAGCCTCCCACCCCATTAACTTCGCTCCCATGGGAGATGGCTTCCCCTCATGCAACAGGCAGGTTTGGGAGTTAGAGGTCAAAAGCAGCTGCCTGAATGAGT TGTTGTTTCCTTATCACTCCTGGTCCCTTTGCAAGTGAACCCTGCAGCTCACCCATTCATTCACCCAACTTCCTTCATTCAGCAGGAGGTCCTATTACCCTCTCCAGCTGCCACTGCCAGAGCTGGAT TCCTGTAAAGGAGTCCAGGCTAGAGCCACAGAGACTGTTGTGGAGGTGAGTTCGGCTGTAGTTAGAGTGATTGGACCCTTCCTATTGGTCTGTCCTGGGCCAACTGGTGGGTGATCTCTGCTGCATCC AACATGGGAGCAGAGACTGGCAGCAGGAGGGGGGAACATGGTGAGAAGTGGTGCTCACTTTTCCCATTCCTCCTAACATAGTTCTACTATGCTAGAAGTGGCATCCAGCGGCCACAGCTAGAAAACAG TCTGCAGTGTGACTTAACTTGTGTATTGCATTCCAGCAGACCACTGAACCAGACAGCGAAGCCAAGATCATTGTTCTACTTTGTATTTACTACTGTGTGAATCAGTTGATTCTACTTCAGGTCCTTGC TTAAATTCCTGTCACTAAATGGAAATGTGTTTGGTTTTAAA
hide sequence
RefSeq Acc Id:
NM_001282573 ⟹ NP_001269502
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 31,297,032 - 31,364,936 (+) NCBI HuRef 1 29,876,529 - 29,944,576 (+) NCBI CHM1_1 1 31,885,735 - 31,953,707 (+) NCBI T2T-CHM13v2.0 1 31,149,254 - 31,217,206 (+) NCBI
Sequence:
GTTTAGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGACACTTGTATTAGCTTTAA TAGAAGAGAAATGGAGGAGCCATAGAATATTAAGGATGAATTCAGGAAGGCCTGAGACCATGGAAAACTTGCCTGCTCTCTACACTATTTTCCAAGGAGAGTTATGGTGAAGCTGAAACAGTGCTCAA GATGAAGCAGCTAATTGAAGACACTGAAAAGAATAAAGTTTATGTTGCTATGGTGACAGACTATGGGGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCATATGTCAT CCTGTCGGGTGGATAAGCCCTCTGAGATAGTAGATGTTGGAGATAAAGTGTGGGTGAAGCTTATTGGCCGAGAGATGAAAAATGATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCAAGGG ACTGGGAAAGACCTTGATCCCAACAATGTTATCATTGAGAGAAGAAGAAAAAGAAACATAGAGATAGGAAGTCATCTGACTCTGACAGCTCAGACTCTGAGAGTGATACAGGCAAGAGGGCAAGGCAC ACATCAAAAGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAGTGAGAGTATAAAGAGTGTAGGGGGTGGTTGAGAGTAAGAAACCAGGAGCCTTGTGCCTT GAGACTCCTGGAAAGACTCAATAGTGAGAATATAGCCTCCCACCCCATTAACTTCGCTCCCATGGGAGATGGCTTCCCCTCATGCAACAGGCAGGTTTGGGAGTTAGAGGTCAAAAGCAGCTGCCTGA ATGAGTTGTTGTTTCCTTATCACTCCTGGTCCCTTTGCAAGTGAACCCTGCAGCTCACCCATTCATTCACCCAACTTCCTTCATTCAGCAGGAGGTCCTATTACCCTCTCCAGCTGCCACTGCCAGAG CTGGATTCCTGTAAAGGAGTCCAGGCTAGAGCCACAGAGACTGTTGTGGAGGTGAGTTCGGCTGTAGTTAGAGTGATTGGACCCTTCCTATTGGTCTGTCCTGGGCCAACTGGTGGGTGATCTCTGCT GCATCCAACATGGGAGCAGAGACTGGCAGCAGGAGGGGGGAACATGGTGAGAAGTGGTGCTCACTTTTCCCATTCCTCCTAACATAGTTCTACTATGCTAGAAGTGGCATCCAGCGGCCACAGCTAGA AAACAGTCTGCAGTGTGACTTAACTTGTGTATTGCATTCCAGCAGACCACTGAACCAGACAGCGAAGCCAAGATCATTGTTCTACTTTGTATTTACTACTGTGTGAATCAGTTGATTCTACTTCAGGT CCTTGCTTAAATTCCTGTCACTAAATGGAAATGTGTTTGGTTTTAAA
hide sequence
RefSeq Acc Id:
NM_001282574 ⟹ NP_001269503
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 31,297,032 - 31,364,936 (+) NCBI HuRef 1 29,876,529 - 29,944,576 (+) NCBI CHM1_1 1 31,885,735 - 31,953,707 (+) NCBI T2T-CHM13v2.0 1 31,149,254 - 31,217,206 (+) NCBI
Sequence:
GTTTAGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGACACTTGTATTAGCTTTAA TAGAAGAGAAATGGAGGAGCCATAGAATATTAAGGATGAATTCAGGAAGGCCTGAGACCATGGAAAACTTGCCTGCTCTCTACACTATTTTCCAAGGAGAGGTTGCTATGGTGACAGACTATGGGGCC TTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCATATGTCATCCTGTCGGGTGGATAAGCCCTCTGAGATAGTAGATGTTGGAGATAAAGTGTGGGTGAAGCTTATTGGCCG AGAGATGAAAAATGATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCAAGGGACTGGGAAAGACCTTGATCCCAACAATGTTATCATTGAGCAAGAAGAGAGGCGGAGGCGATCCTTCCAGG ATTACACTGGGCAGAAGATCACCCTTGAGGCTGTCTTGAACACTACCTGCAAGAAGTGTGGCTGTAAAGGAGAAGAAGAAAAAGAAACATAGAGATAGGAAGTCATCTGACTCTGACAGCTCAGACTC TGAGAGTGATACAGGCAAGAGGGCAAGGCACACATCAAAAGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAGTGAGAGTATAAAGAGTGTAGGGGGTGGT TGAGAGTAAGAAACCAGGAGCCTTGTGCCTTGAGACTCCTGGAAAGACTCAATAGTGAGAATATAGCCTCCCACCCCATTAACTTCGCTCCCATGGGAGATGGCTTCCCCTCATGCAACAGGCAGGTT TGGGAGTTAGAGGTCAAAAGCAGCTGCCTGAATGAGTTGTTGTTTCCTTATCACTCCTGGTCCCTTTGCAAGTGAACCCTGCAGCTCACCCATTCATTCACCCAACTTCCTTCATTCAGCAGGAGGTC CTATTACCCTCTCCAGCTGCCACTGCCAGAGCTGGATTCCTGTAAAGGAGTCCAGGCTAGAGCCACAGAGACTGTTGTGGAGGTGAGTTCGGCTGTAGTTAGAGTGATTGGACCCTTCCTATTGGTCT GTCCTGGGCCAACTGGTGGGTGATCTCTGCTGCATCCAACATGGGAGCAGAGACTGGCAGCAGGAGGGGGGAACATGGTGAGAAGTGGTGCTCACTTTTCCCATTCCTCCTAACATAGTTCTACTATG CTAGAAGTGGCATCCAGCGGCCACAGCTAGAAAACAGTCTGCAGTGTGACTTAACTTGTGTATTGCATTCCAGCAGACCACTGAACCAGACAGCGAAGCCAAGATCATTGTTCTACTTTGTATTTACT ACTGTGTGAATCAGTTGATTCTACTTCAGGTCCTTGCTTAAATTCCTGTCACTAAATGGAAATGTGTTTGGTTTTAAA
hide sequence
RefSeq Acc Id:
NM_016505 ⟹ NP_057589
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 31,297,032 - 31,364,936 (+) NCBI GRCh37 1 31,769,832 - 31,838,569 (+) NCBI Build 36 1 31,542,429 - 31,610,367 (+) NCBI Archive Celera 1 30,026,341 - 30,094,350 (+) RGD HuRef 1 29,876,529 - 29,944,576 (+) NCBI CHM1_1 1 31,885,735 - 31,953,707 (+) NCBI T2T-CHM13v2.0 1 31,149,254 - 31,217,206 (+) NCBI
Sequence:
GTTTAGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGACACTTGTATTAGCTTTAATAGAAGAGAAATGGAGGAGCCATAGAATATTAAGGATGAATTCAGGAAGGCCTGAGACCATGGA AAACTTGCCTGCTCTCTACACTATTTTCCAAGGAGAGGTTGCTATGGTGACAGACTATGGGGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCATATGTCATCCTGTC GGGTGGATAAGCCCTCTGAGATAGTAGATGTTGGAGATAAAGTGTGGGTGAAGCTTATTGGCCGAGAGATGAAAAATGATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCAAGGGACTGGG AAAGACCTTGATCCCAACAATGTTATCATTGAGCAAGAAGAGAGGCGGAGGCGATCCTTCCAGGATTACACTGGGCAGAAGATCACCCTTGAGGCTGTCTTGAACACTACCTGCAAGAAGTGTGGCTG TAAAGGCCACTTTGCAAAAGATTGTTTCATGCAACCAGGTGGGACTAAATACTCTCTGATACCTGATGAGGAAGAGGAAAAGGAAGAGGCAAAGTCAGCAGAGTTTGAGAAGCCTGACCCTACAAGGA ATCCTTCTAGAAAAAGAAAGAAGGAGAAGAAGAAAAAGAAACATAGAGATAGGAAGTCATCTGACTCTGACAGCTCAGACTCTGAGAGTGATACAGGCAAGAGGGCAAGGCACACATCAAAAGACAGC AAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAGTGAGAGTATAAAGAGTGTAGGGGGTGGTTGAGAGTAAGAAACCAGGAGCCTTGTGCCTTGAGACTCCTGGAAAG ACTCAATAGTGAGAATATAGCCTCCCACCCCATTAACTTCGCTCCCATGGGAGATGGCTTCCCCTCATGCAACAGGCAGGTTTGGGAGTTAGAGGTCAAAAGCAGCTGCCTGAATGAGTTGTTGTTTC CTTATCACTCCTGGTCCCTTTGCAAGTGAACCCTGCAGCTCACCCATTCATTCACCCAACTTCCTTCATTCAGCAGGAGGTCCTATTACCCTCTCCAGCTGCCACTGCCAGAGCTGGATTCCTGTAAA GGAGTCCAGGCTAGAGCCACAGAGACTGTTGTGGAGGTGAGTTCGGCTGTAGTTAGAGTGATTGGACCCTTCCTATTGGTCTGTCCTGGGCCAACTGGTGGGTGATCTCTGCTGCATCCAACATGGGA GCAGAGACTGGCAGCAGGAGGGGGGAACATGGTGAGAAGTGGTGCTCACTTTTCCCATTCCTCCTAACATAGTTCTACTATGCTAGAAGTGGCATCCAGCGGCCACAGCTAGAAAACAGTCTGCAGTG TGACTTAACTTGTGTATTGCATTCCAGCAGACCACTGAACCAGACAGCGAAGCCAAGATCATTGTTCTACTTTGTATTTACTACTGTGTGAATCAGTTGATTCTACTTCAGGTCCTTGCTTAAATTCC TGTCACTAAATGGAAATGTGTTTGGTTTTAAA
hide sequence
RefSeq Acc Id:
XM_047422508 ⟹ XP_047278464
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 31,297,032 - 31,364,936 (+) NCBI
RefSeq Acc Id:
XM_054336976 ⟹ XP_054192951
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 1 31,149,209 - 31,217,206 (+) NCBI
RefSeq Acc Id:
NP_057589 ⟸ NM_016505
- Peptide Label:
isoform c
- UniProtKB:
Q9NYG4 (UniProtKB/Swiss-Prot), Q6PKH4 (UniProtKB/Swiss-Prot), D3DPN4 (UniProtKB/Swiss-Prot), B4DY38 (UniProtKB/Swiss-Prot), Q9P0M8 (UniProtKB/Swiss-Prot), Q9NP64 (UniProtKB/Swiss-Prot), B4DYA9 (UniProtKB/TrEMBL)
- Sequence:
MNSGRPETMENLPALYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMKVVNQGTGKDLDPNNVIIEQEERRRRSFQDYTGQKITLEAV LNTTCKKCGCKGHFAKDCFMQPGGTKYSLIPDEEEEKEEAKSAEFEKPDPTRNPSRKRKKEKKKKKHRDRKSSDSDSSDSESDTGKRARHTSKDSKAAKKKKKKKKHKKKHKE
hide sequence
RefSeq Acc Id:
NP_001269497 ⟸ NM_001282568
- Peptide Label:
isoform c
- UniProtKB:
Q9NYG4 (UniProtKB/Swiss-Prot), Q6PKH4 (UniProtKB/Swiss-Prot), D3DPN4 (UniProtKB/Swiss-Prot), B4DY38 (UniProtKB/Swiss-Prot), Q9P0M8 (UniProtKB/Swiss-Prot), Q9NP64 (UniProtKB/Swiss-Prot), B4DYA9 (UniProtKB/TrEMBL)
- Sequence:
MNSGRPETMENLPALYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMKVVNQGTGKDLDPNNVIIEQEERRRRSFQDYTGQKITLEAV LNTTCKKCGCKGHFAKDCFMQPGGTKYSLIPDEEEEKEEAKSAEFEKPDPTRNPSRKRKKEKKKKKHRDRKSSDSDSSDSESDTGKRARHTSKDSKAAKKKKKKKKHKKKHKE
hide sequence
RefSeq Acc Id:
NP_001269495 ⟸ NM_001282566
- Peptide Label:
isoform a
- UniProtKB:
A0A087WXF8 (UniProtKB/TrEMBL), B4DYA9 (UniProtKB/TrEMBL)
- Sequence:
MRKNGVGGCLSLEATPRLCSLNLPFSAEGADSKGWEAGPESPAVVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMKVVNQGTGKDLDPNNVIIE QEERRRRSFQDYTGQKITLEAVLNTTCKKCGCKGHFAKDCFMQPGGTKYSLIPDEEEEKEEAKSAEFEKPDPTRNPSRKRKKEKKKKKHRDRKSSDSDSSDSESDTGKRARHTSKDSKAAKKKKKKKK HKKKHKE
hide sequence
RefSeq Acc Id:
NP_001269498 ⟸ NM_001282569
- Peptide Label:
isoform d
- UniProtKB:
B4DYA9 (UniProtKB/TrEMBL)
- Sequence:
MKQLIEDTEKNKVYVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLI GREMKNDRIKVSLSMKVVNQGTGKDLDPNNVIIEQEERRRRSFQDYTGQKITLEAVLNTTCKKCGCKGHFAKDCFMQPGGTKYSLIPDEEEEKEEAKSAEFEKPDPTRNPSRKRKKEKKKKKHRDRKS SDSDSSDSESDTGKRARHTSKDSKAAKKKKKKKKHKKKHKE
hide sequence
RefSeq Acc Id:
NP_001269502 ⟸ NM_001282573
- Peptide Label:
isoform h
- UniProtKB:
A0A087WYF0 (UniProtKB/TrEMBL)
- Sequence:
MKQLIEDTEKNKVYVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLI GREMKNDRIKVSLSMKVVNQGTGKDLDPNNVIIERRRKRNIEIGSHLTLTAQTLRVIQARGQGTHQKTARQQRRRKRRRSTRRSTRSESIKSVGGG
hide sequence
RefSeq Acc Id:
NP_001269503 ⟸ NM_001282574
- Peptide Label:
isoform i
- UniProtKB:
A0A087WXU5 (UniProtKB/TrEMBL)
- Sequence:
MNSGRPETMENLPALYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMKVVNQGTGKDLDPNNVIIEQEERRRRSFQDYTGQKITLEAV LNTTCKKCGCKGEEEKET
hide sequence
RefSeq Acc Id:
NP_001269501 ⟸ NM_001282572
- Peptide Label:
isoform g
- UniProtKB:
Q9NP64 (UniProtKB/Swiss-Prot), B4DYA9 (UniProtKB/TrEMBL)
- Sequence:
MNSGRPETMENLPALYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVG DKVWVKLIGREMKNDRIKVSLSMKVVNQGTGKDLDPNNVIIERRRKRNIEIGSHLTLTAQTLRVIQARGQGTHQKTARQQRRRKRRRSTRRSTRSESIKSVGGG
hide sequence
RefSeq Acc Id:
NP_001269500 ⟸ NM_001282571
- Peptide Label:
isoform f
- UniProtKB:
A0A087WYV3 (UniProtKB/TrEMBL)
- Sequence:
MGPLSKSQAVGSKMKNDRIKVSLSMKVVNQGTGKDLDPNNVIIEQEERRRRSFQDYTGQKITLEAVLNTTCKKCGCKGHFAKDCFMQPGGTKYSLIPDEEEEKEEAKSAEFEKPDPTRNPSRKRKKEK KKKKHRDRKSSDSDSSDSESDTGKRARHTSKDSKAAKKKKKKKKHKKKHKE
hide sequence
RefSeq Acc Id:
NP_001269496 ⟸ NM_001282567
- Peptide Label:
isoform b
- UniProtKB:
A0A0D9SEW3 (UniProtKB/TrEMBL), B4DYA9 (UniProtKB/TrEMBL)
- Sequence:
MVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMK VVNQGTGKDLDPNNVIIEQEERRRRSFQDYTGQKITLEAVLNTTCKKCGCKGRVKPLPFPRFSPCGWTLFWKKEAAQCHFAKDCFMQPGGTKYSLIPDEEEEKEEAKSAEFEKPDPTRNPSRKRKKEK KKKKHRDRKSSDSDSSDSESDTGKRARHTSKDSKAAKKKKKKKKHKKKHKE
hide sequence
RefSeq Acc Id:
NP_001269499 ⟸ NM_001282570
- Peptide Label:
isoform e
- UniProtKB:
B4DYA9 (UniProtKB/TrEMBL)
- Sequence:
MVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMK VVNQGTGKDLDPNNVIIEQEERRRRSFQDYTGQKITLEAVLNTTCKKCGCKGHFAKDCFMQPGGTKYSLIPDEEEEKEEAKSAEFEKPDPTRNPSRKRKKEKKKKKHRDRKSSDSDSSDSESDTGKRA RHTSKDSKAAKKKKKKKKHKKKHKE
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Ensembl Acc Id:
ENSP00000362819 ⟸ ENST00000373714
Ensembl Acc Id:
ENSP00000444742 ⟸ ENST00000546109
Ensembl Acc Id:
ENSP00000486079 ⟸ ENST00000627541
Ensembl Acc Id:
ENSP00000480986 ⟸ ENST00000615916
Ensembl Acc Id:
ENSP00000482122 ⟸ ENST00000616393
Ensembl Acc Id:
ENSP00000481743 ⟸ ENST00000616859
Ensembl Acc Id:
ENSP00000481299 ⟸ ENST00000618216
Ensembl Acc Id:
ENSP00000343557 ⟸ ENST00000344147
RefSeq Acc Id:
XP_047278464 ⟸ XM_047422508
- Peptide Label:
isoform X1
- UniProtKB:
Q9NYG4 (UniProtKB/Swiss-Prot), Q9NP64 (UniProtKB/Swiss-Prot), Q6PKH4 (UniProtKB/Swiss-Prot), D3DPN4 (UniProtKB/Swiss-Prot), B4DY38 (UniProtKB/Swiss-Prot), Q9P0M8 (UniProtKB/Swiss-Prot), B4DYA9 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_054192951 ⟸ XM_054336976
- Peptide Label:
isoform X1
- UniProtKB:
Q9NYG4 (UniProtKB/Swiss-Prot), Q9NP64 (UniProtKB/Swiss-Prot), Q6PKH4 (UniProtKB/Swiss-Prot), D3DPN4 (UniProtKB/Swiss-Prot), B4DY38 (UniProtKB/Swiss-Prot), Q9P0M8 (UniProtKB/Swiss-Prot), B4DYA9 (UniProtKB/TrEMBL)
RGD ID: 6854782
Promoter ID: EPDNEW_H556
Type: initiation region
Name: ZCCHC17_1
Description: zinc finger CCHC-type containing 17
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Human Assembly Chr Position (strand) Source GRCh38 1 31,297,032 - 31,297,092 EPDNEW
RGD ID: 6786910
Promoter ID: HG_KWN:1738
Type: CpG-Island
SO ACC ID: SO:0000170
Source: MPROMDB
Tissues & Cell Lines: CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4
Transcripts: ENST00000373714, NM_004814, OTTHUMT00000010663, OTTHUMT00000010664, OTTHUMT00000010666, OTTHUMT00000010667, UC001BSQ.1, UC009VTU.1, UC009VTV.1
Position: Human Assembly Chr Position (strand) Source Build 36 1 31,541,216 - 31,542,587 (-) MPROMDB
RGD ID: 6851068
Promoter ID: EP73331
Type: initiation region
Name: HS_HSPC251
Description: Putative S1 RNA binding domain protein.
SO ACC ID: SO:0000170
Source: EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: NEDO full length human cDNA sequencing project.; Oligo-capping
Position: Human Assembly Chr Position (strand) Source Build 36 1 31,542,466 - 31,542,526 EPD
COSMIC
ZCCHC17
COSMIC
Ensembl Genes
ENSG00000121766
Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript
ENST00000344147
ENTREZGENE
ENST00000344147.10
UniProtKB/Swiss-Prot
ENST00000373714
ENTREZGENE
ENST00000373714.5
UniProtKB/Swiss-Prot
ENST00000546109
ENTREZGENE
ENST00000546109.5
UniProtKB/Swiss-Prot
ENST00000615916
ENTREZGENE
ENST00000615916.4
UniProtKB/TrEMBL
ENST00000616393
ENTREZGENE
ENST00000616393.4
UniProtKB/TrEMBL
ENST00000616859
ENTREZGENE
ENST00000616859.4
UniProtKB/TrEMBL
ENST00000618216
ENTREZGENE
ENST00000618216.4
UniProtKB/TrEMBL
ENST00000627541
ENTREZGENE
ENST00000627541.1
UniProtKB/TrEMBL
Gene3D-CATH
2.40.50.140
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Zinc finger, CCHC-type
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx
ENSG00000121766
GTEx
HGNC ID
HGNC:30246
ENTREZGENE
Human Proteome Map
ZCCHC17
Human Proteome Map
InterPro
NA-bd_OB-fold
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
S1_domain
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
ZCCHC17_S1
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Znf_CCHC
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report
hsa:51538
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene
51538
ENTREZGENE
OMIM
619744
OMIM
PANTHER
NUCLEOLAR PROTEIN OF 40 KDA
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PTHR15838:SF1
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam
PF00575
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB
PA142670539
PharmGKB
PROSITE
PS50126
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
ZF_CCHC
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART
SM00316
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP
SSF50249
UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt
A0A087WXF8
ENTREZGENE, UniProtKB/TrEMBL
A0A087WXU5
ENTREZGENE, UniProtKB/TrEMBL
A0A087WYF0
ENTREZGENE, UniProtKB/TrEMBL
A0A087WYV3
ENTREZGENE, UniProtKB/TrEMBL
A0A0D9SEW3
ENTREZGENE, UniProtKB/TrEMBL
B4DY38
ENTREZGENE
B4DYA9
ENTREZGENE, UniProtKB/TrEMBL
D3DPN4
ENTREZGENE
NO40_HUMAN
UniProtKB/Swiss-Prot
Q6PKH4
ENTREZGENE
Q9NP64
ENTREZGENE
Q9NYG4
ENTREZGENE
Q9P0M8
ENTREZGENE
UniProt Secondary
B4DY38
UniProtKB/Swiss-Prot
D3DPN4
UniProtKB/Swiss-Prot
Q6PKH4
UniProtKB/Swiss-Prot
Q9NYG4
UniProtKB/Swiss-Prot
Q9P0M8
UniProtKB/Swiss-Prot
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2016-02-16
ZCCHC17
zinc finger CCHC-type containing 17
zinc finger, CCHC domain containing 17
Symbol and/or name change
5135510
APPROVED