FCMR (Fc mu receptor) - Rat Genome Database

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Gene: FCMR (Fc mu receptor) Homo sapiens
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Symbol: FCMR
Name: Fc mu receptor
RGD ID: 1603318
HGNC Page HGNC:14315
Description: Enables high-affinity IgM receptor activity and polymeric immunoglobulin binding activity. Involved in Fc receptor-mediated immune complex endocytosis. Located in bounding membrane of organelle; plasma membrane; and trans-Golgi network membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: FAIM3; fas apoptotic inhibitory molecule 3; Fc fragment of IgM receptor; FcmuR; IgM Fc fragment receptor; IgM Fc receptor; IgM FcR; immunoglobulin mu Fc receptor; regulator of Fas-induced apoptosis Toso; TOSO
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381206,903,317 - 206,923,196 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1206,903,317 - 206,923,247 (-)EnsemblGRCh38hg38GRCh38
GRCh371207,076,662 - 207,096,541 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361205,144,354 - 205,161,966 (-)NCBINCBI36Build 36hg18NCBI36
Celera1180,328,164 - 180,346,901 (-)NCBICelera
Cytogenetic Map1q32.1NCBI
HuRef1177,774,904 - 177,793,610 (-)NCBIHuRef
CHM1_11208,349,195 - 208,367,907 (-)NCBICHM1_1
T2T-CHM13v2.01206,167,622 - 206,187,486 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
2. Immune cell profiling of COVID-19 patients in the recovery stage by single-cell sequencing. Wen W, etal., Cell Discov. 2020 May 4;6:31. doi: 10.1038/s41421-020-0168-9. eCollection 2020.
Additional References at PubMed
PMID:1563211   PMID:9586636   PMID:12477932   PMID:15342556   PMID:16344560   PMID:16712791   PMID:17553462   PMID:18029348   PMID:18434611   PMID:18708628   PMID:19347734   PMID:19858324  
PMID:20042454   PMID:20211142   PMID:20237496   PMID:20410497   PMID:21133733   PMID:21264533   PMID:21613257   PMID:21756805   PMID:21873635   PMID:21908424   PMID:21908732   PMID:22675200  
PMID:25888699   PMID:31449905   PMID:32572908   PMID:32784334   PMID:34209905   PMID:35575683   PMID:36949194   PMID:37095205   PMID:38334954  


Genomics

Comparative Map Data
FCMR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381206,903,317 - 206,923,196 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1206,903,317 - 206,923,247 (-)EnsemblGRCh38hg38GRCh38
GRCh371207,076,662 - 207,096,541 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361205,144,354 - 205,161,966 (-)NCBINCBI36Build 36hg18NCBI36
Celera1180,328,164 - 180,346,901 (-)NCBICelera
Cytogenetic Map1q32.1NCBI
HuRef1177,774,904 - 177,793,610 (-)NCBIHuRef
CHM1_11208,349,195 - 208,367,907 (-)NCBICHM1_1
T2T-CHM13v2.01206,167,622 - 206,187,486 (-)NCBIT2T-CHM13v2.0
Fcmr
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391130,793,514 - 130,808,528 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1130,793,406 - 130,808,528 (+)EnsemblGRCm39 Ensembl
GRCm381130,865,777 - 130,880,790 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1130,865,669 - 130,880,791 (+)EnsemblGRCm38mm10GRCm38
MGSCv371132,762,354 - 132,777,367 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361132,693,323 - 132,708,336 (+)NCBIMGSCv36mm8
Celera1133,488,863 - 133,503,870 (+)NCBICelera
Cytogenetic Map1E4NCBI
cM Map156.89NCBI
Fcmr
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81344,889,628 - 44,903,926 (+)NCBIGRCr8
mRatBN7.21342,337,363 - 42,351,706 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1342,337,414 - 42,351,653 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1344,943,942 - 44,958,193 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01346,232,069 - 46,246,326 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01343,487,138 - 43,501,422 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01347,602,701 - 47,617,065 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1347,602,692 - 47,617,064 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01352,691,406 - 52,706,509 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41343,815,827 - 43,830,062 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11343,829,869 - 43,844,104 (+)NCBI
Celera1342,686,877 - 42,701,122 (+)NCBICelera
Cytogenetic Map13q13NCBI
Fcmr
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540642,438,783 - 42,452,163 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540642,438,173 - 42,452,339 (-)NCBIChiLan1.0ChiLan1.0
FCMR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2142,452,680 - 42,471,350 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1142,418,609 - 42,437,265 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01182,506,551 - 182,525,249 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11186,786,037 - 186,803,789 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1186,786,147 - 186,803,789 (-)Ensemblpanpan1.1panPan2
FCMR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.176,046,270 - 6,064,063 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl76,048,814 - 6,064,013 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha75,611,371 - 5,628,152 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.075,736,666 - 5,753,451 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl75,735,657 - 5,753,403 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.175,671,067 - 5,687,846 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.075,772,136 - 5,788,910 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.075,811,956 - 5,828,759 (-)NCBIUU_Cfam_GSD_1.0
Fcmr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934468,469,977 - 68,479,105 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365575,707,138 - 5,718,192 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FCMR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl967,532,083 - 67,546,402 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1967,530,944 - 67,546,441 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2973,987,313 - 74,001,868 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FCMR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12522,435,252 - 22,453,582 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2522,435,339 - 22,447,732 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605523,100,042 - 23,125,491 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fcmr
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248074,567,240 - 4,581,406 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in FCMR
35 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 1q31.1-42.11(chr1:187143981-224299417)x3 copy number gain See cases [RCV000051857] Chr1:187143981..224299417 [GRCh38]
Chr1:187113113..224487119 [GRCh37]
Chr1:185379736..222553742 [NCBI36]
Chr1:1q31.1-42.11		 pathogenic
GRCh38/hg38 1q32.1-32.2(chr1:204990129-210220258)x3 copy number gain See cases [RCV000051859] Chr1:204990129..210220258 [GRCh38]
Chr1:204959257..210572305 [GRCh37]
Chr1:203225880..208638928 [NCBI36]
Chr1:1q32.1-32.2		 pathogenic
GRCh38/hg38 1q32.1-42.12(chr1:204764914-225408698)x3 copy number gain See cases [RCV000142054] Chr1:204764914..225408698 [GRCh38]
Chr1:204734042..225596400 [GRCh37]
Chr1:203000665..223663023 [NCBI36]
Chr1:1q32.1-42.12		 pathogenic
GRCh37/hg19 1q31.3-42.13(chr1:197811907-228997888)x3 copy number gain See cases [RCV000240137] Chr1:197811907..228997888 [GRCh37]
Chr1:1q31.3-42.13		 pathogenic
GRCh37/hg19 1q31.3-44(chr1:195483439-249213000)x3 copy number gain See cases [RCV000449172] Chr1:195483439..249213000 [GRCh37]
Chr1:1q31.3-44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1q32.1-32.2(chr1:206961307-207252090)x1 copy number loss See cases [RCV000510174] Chr1:206961307..207252090 [GRCh37]
Chr1:1q32.1-32.2		 likely benign
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1q32.1-32.3(chr1:204682513-212815646) copy number loss Global developmental delay [RCV000626524] Chr1:204682513..212815646 [GRCh37]
Chr1:1q32.1-32.3		 pathogenic
NM_005449.5(FCMR):c.134G>A (p.Arg45Lys) single nucleotide variant not specified [RCV004291938] Chr1:206913998 [GRCh38]
Chr1:207087343 [GRCh37]
Chr1:1q32.1		 uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
NC_000001.11:g.(?_204033173)_(208209798_?)del deletion Autism [RCV000754138] Chr1:204033173..208209798 [GRCh38]
Chr1:1q32.1-32.2		 likely pathogenic
GRCh37/hg19 1q25.3-41(chr1:185644663-221698833)x3 copy number gain not provided [RCV000749265] Chr1:185644663..221698833 [GRCh37]
Chr1:1q25.3-41		 pathogenic
GRCh37/hg19 1q25.3-44(chr1:182388773-249111240)x3 copy number gain not provided [RCV000845852] Chr1:182388773..249111240 [GRCh37]
Chr1:1q25.3-44		 pathogenic
GRCh37/hg19 1q32.1-32.3(chr1:206329070-213263817)x3 copy number gain not provided [RCV000848713] Chr1:206329070..213263817 [GRCh37]
Chr1:1q32.1-32.3		 uncertain significance
NM_005449.5(FCMR):c.209C>T (p.Ala70Val) single nucleotide variant not specified [RCV004294543] Chr1:206913923 [GRCh38]
Chr1:207087268 [GRCh37]
Chr1:1q32.1		 likely benign
GRCh37/hg19 1q32.1-44(chr1:204045948-249218992)x3 copy number gain See cases [RCV001007407] Chr1:204045948..249218992 [GRCh37]
Chr1:1q32.1-44		 pathogenic
GRCh37/hg19 1q31.3-32.2(chr1:194356425-210988710)x3 copy number gain not provided [RCV001249273] Chr1:194356425..210988710 [GRCh37]
Chr1:1q31.3-32.2		 not provided
NC_000001.10:g.(?_130980840)_(248900000_?)dup duplication Gastrointestinal stromal tumor [RCV001300221]|Parathyroid carcinoma [RCV001341077] Chr1:130980840..248900000 [GRCh37]
Chr1:1q12-44		 uncertain significance
NC_000001.10:g.(?_206941981)_(208391267_?)dup duplication Immunodeficiency, common variable, 7 [RCV001939950]|Inflammatory bowel disease [RCV001916125] Chr1:206941981..208391267 [GRCh37]
Chr1:1q32.1-32.2		 uncertain significance
NC_000001.10:g.(?_200522516)_(208391267_?)dup duplication Hypokalemic periodic paralysis, type 1 [RCV003119239]|not provided [RCV003119240] Chr1:200522516..208391267 [GRCh37]
Chr1:1q32.1-32.2		 uncertain significance|no classifications from unflagged records
GRCh37/hg19 1q31.3-44(chr1:197867914-249224684)x3 copy number gain See cases [RCV002287837] Chr1:197867914..249224684 [GRCh37]
Chr1:1q31.3-44		 pathogenic
NM_005449.5(FCMR):c.1123G>A (p.Ala375Thr) single nucleotide variant not specified [RCV004297844] Chr1:206905069 [GRCh38]
Chr1:207078414 [GRCh37]
Chr1:1q32.1		 likely benign
NM_005449.5(FCMR):c.794T>C (p.Leu265Pro) single nucleotide variant not specified [RCV004153463] Chr1:206910257 [GRCh38]
Chr1:207083602 [GRCh37]
Chr1:1q32.1		 uncertain significance
GRCh37/hg19 1q25.3-32.3(chr1:181453460-213107248)x3 copy number gain not provided [RCV002475637] Chr1:181453460..213107248 [GRCh37]
Chr1:1q25.3-32.3		 pathogenic
NM_005449.5(FCMR):c.1128G>C (p.Met376Ile) single nucleotide variant not specified [RCV004088237] Chr1:206905064 [GRCh38]
Chr1:207078409 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.221G>A (p.Gly74Asp) single nucleotide variant not specified [RCV004215452] Chr1:206913911 [GRCh38]
Chr1:207087256 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.705G>T (p.Arg235Ser) single nucleotide variant not specified [RCV004237714] Chr1:206911735 [GRCh38]
Chr1:207085080 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.62C>G (p.Pro21Arg) single nucleotide variant not specified [RCV004152126] Chr1:206914070 [GRCh38]
Chr1:207087415 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.760A>T (p.Ile254Phe) single nucleotide variant not specified [RCV004200104] Chr1:206910291 [GRCh38]
Chr1:207083636 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.1003G>A (p.Val335Ile) single nucleotide variant not specified [RCV004118829] Chr1:206909503 [GRCh38]
Chr1:207082848 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.482C>A (p.Thr161Asn) single nucleotide variant not specified [RCV004158665] Chr1:206912934 [GRCh38]
Chr1:207086279 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.1009G>A (p.Gly337Ser) single nucleotide variant not specified [RCV004224071] Chr1:206909497 [GRCh38]
Chr1:207082842 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.593G>A (p.Gly198Asp) single nucleotide variant not specified [RCV004231442] Chr1:206911847 [GRCh38]
Chr1:207085192 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.409G>C (p.Glu137Gln) single nucleotide variant not specified [RCV004178759] Chr1:206913007 [GRCh38]
Chr1:207086352 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.64G>A (p.Glu22Lys) single nucleotide variant not specified [RCV004246697] Chr1:206914068 [GRCh38]
Chr1:207087413 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.253A>C (p.Asn85His) single nucleotide variant not specified [RCV004173319] Chr1:206913879 [GRCh38]
Chr1:207087224 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.78G>T (p.Glu26Asp) single nucleotide variant not specified [RCV004120644] Chr1:206914054 [GRCh38]
Chr1:207087399 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.496C>A (p.Pro166Thr) single nucleotide variant not specified [RCV004154640] Chr1:206911944 [GRCh38]
Chr1:207085289 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.149G>A (p.Arg50Gln) single nucleotide variant not specified [RCV004078037] Chr1:206913983 [GRCh38]
Chr1:207087328 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.379G>A (p.Glu127Lys) single nucleotide variant not specified [RCV004223310] Chr1:206913037 [GRCh38]
Chr1:207086382 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.902G>T (p.Arg301Met) single nucleotide variant not specified [RCV004255508] Chr1:206909808 [GRCh38]
Chr1:207083153 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.922C>A (p.Pro308Thr) single nucleotide variant not specified [RCV004254263] Chr1:206909788 [GRCh38]
Chr1:207083133 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.605G>A (p.Arg202Gln) single nucleotide variant not specified [RCV004259702] Chr1:206911835 [GRCh38]
Chr1:207085180 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.368A>G (p.His123Arg) single nucleotide variant not specified [RCV004336812] Chr1:206913764 [GRCh38]
Chr1:207087109 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.442T>C (p.Phe148Leu) single nucleotide variant not specified [RCV004358356] Chr1:206912974 [GRCh38]
Chr1:207086319 [GRCh37]
Chr1:1q32.1		 likely benign
NM_005449.5(FCMR):c.1070C>T (p.Ala357Val) single nucleotide variant not provided [RCV003414737] Chr1:206905122 [GRCh38]
Chr1:207078467 [GRCh37]
Chr1:1q32.1		 benign
NM_005449.5(FCMR):c.421T>C (p.Trp141Arg) single nucleotide variant not specified [RCV004391497] Chr1:206912995 [GRCh38]
Chr1:207086340 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.882C>T (p.Arg294=) single nucleotide variant not specified [RCV004391499] Chr1:206909828 [GRCh38]
Chr1:207083173 [GRCh37]
Chr1:1q32.1		 likely benign
NM_005449.5(FCMR):c.1166C>T (p.Pro389Leu) single nucleotide variant not specified [RCV004391494] Chr1:206905026 [GRCh38]
Chr1:207078371 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.248G>A (p.Arg83His) single nucleotide variant not specified [RCV004391495] Chr1:206913884 [GRCh38]
Chr1:207087229 [GRCh37]
Chr1:1q32.1		 likely benign
NM_005449.5(FCMR):c.974C>G (p.Ala325Gly) single nucleotide variant not specified [RCV004391501] Chr1:206909736 [GRCh38]
Chr1:207083081 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.975G>A (p.Ala325=) single nucleotide variant not specified [RCV004391502] Chr1:206909735 [GRCh38]
Chr1:207083080 [GRCh37]
Chr1:1q32.1		 likely benign
NM_005449.5(FCMR):c.337G>A (p.Gly113Arg) single nucleotide variant not specified [RCV004391496] Chr1:206913795 [GRCh38]
Chr1:207087140 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.91G>C (p.Gly31Arg) single nucleotide variant not specified [RCV004391500] Chr1:206914041 [GRCh38]
Chr1:207087386 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.1006C>G (p.Pro336Ala) single nucleotide variant not specified [RCV004391493] Chr1:206909500 [GRCh38]
Chr1:207082845 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_005449.5(FCMR):c.802C>A (p.Leu268Met) single nucleotide variant not specified [RCV004618508] Chr1:206910249 [GRCh38]
Chr1:207083594 [GRCh37]
Chr1:1q32.1		 uncertain significance
NC_000001.10:g.(?_190829412)_(216061974_?)del deletion not provided [RCV004579260] Chr1:190829412..216061974 [GRCh37]
Chr1:1q31.2-41		 pathogenic
NM_005449.5(FCMR):c.317C>T (p.Ala106Val) single nucleotide variant not specified [RCV004618505] Chr1:206913815 [GRCh38]
Chr1:207087160 [GRCh37]
Chr1:1q32.1		 likely benign
NM_005449.5(FCMR):c.932A>T (p.Gln311Leu) single nucleotide variant not specified [RCV004618507] Chr1:206909778 [GRCh38]
Chr1:207083123 [GRCh37]
Chr1:1q32.1		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2497
Count of miRNA genes:886
Interacting mature miRNAs:1067
Transcripts:ENST00000367091, ENST00000420007, ENST00000442471, ENST00000463473, ENST00000474041, ENST00000525793, ENST00000528654, ENST00000529560, ENST00000530505, ENST00000533312
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407049941GWAS698917_Htriacylglycerol 54:8 measurement QTL GWAS698917 (human)0.000003blood triglyceride amount (VT:0002644)1206922206206922207Human

Markers in Region
D1S2735  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371207,091,891 - 207,092,113UniSTSGRCh37
Build 361205,158,514 - 205,158,736RGDNCBI36
Celera1180,343,413 - 180,343,635RGD
Cytogenetic Map1q32.1UniSTS
HuRef1177,790,113 - 177,790,343UniSTS
Marshfield Genetic Map1222.84RGD
Marshfield Genetic Map1222.84UniSTS
Genethon Genetic Map1227.3UniSTS
deCODE Assembly Map1209.38UniSTS
GeneMap99-GB4 RH Map1682.48UniSTS
NCBI RH Map11793.8UniSTS
IL24_765  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371207,076,531 - 207,077,359UniSTSGRCh37
Build 361205,143,154 - 205,143,982RGDNCBI36
Celera1180,328,065 - 180,328,893RGD
HuRef1177,774,805 - 177,775,633UniSTS
SHGC-76250  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371207,076,971 - 207,077,143UniSTSGRCh37
Build 361205,143,594 - 205,143,766RGDNCBI36
Celera1180,328,505 - 180,328,677RGD
Cytogenetic Map1q32UniSTS
Cytogenetic Map1q32.1UniSTS
HuRef1177,775,245 - 177,775,417UniSTS
TNG Radiation Hybrid Map1102070.0UniSTS
GeneMap99-GB4 RH Map1682.48UniSTS
NCBI RH Map11791.2UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
1204 2421 2777 2235 4861 1713 2315 3 615 1935 455 2251 7244 6434 45 3632 1 842 1718 1590 172

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001142473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001193338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001405892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_005449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005273352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047434331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047434334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_921999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA769146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC098935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF057557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI524407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK292007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK297053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK301187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK316336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP225124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP305798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP338035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BT006797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB158779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA971987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB122623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC393681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GQ160900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GQ160901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HI179036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM480394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000367091   ⟹   ENSP00000356058
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1206,903,317 - 206,921,941 (-)Ensembl
Ensembl Acc Id: ENST00000442471   ⟹   ENSP00000404136
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1206,904,559 - 206,921,998 (-)Ensembl
Ensembl Acc Id: ENST00000463473   ⟹   ENSP00000436799
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1206,904,894 - 206,921,941 (-)Ensembl
Ensembl Acc Id: ENST00000474041
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1206,904,525 - 206,909,945 (-)Ensembl
Ensembl Acc Id: ENST00000525793   ⟹   ENSP00000432936
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1206,912,963 - 206,923,196 (-)Ensembl
Ensembl Acc Id: ENST00000528654
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1206,904,714 - 206,921,955 (-)Ensembl
Ensembl Acc Id: ENST00000529560   ⟹   ENSP00000437331
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1206,912,973 - 206,923,247 (-)Ensembl
Ensembl Acc Id: ENST00000530505   ⟹   ENSP00000436316
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1206,913,801 - 206,921,997 (-)Ensembl
Ensembl Acc Id: ENST00000533312
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1206,913,632 - 206,921,941 (-)Ensembl
Ensembl Acc Id: ENST00000628511   ⟹   ENSP00000485739
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1206,905,019 - 206,921,867 (-)Ensembl
RefSeq Acc Id: NM_001142473   ⟹   NP_001135945
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,921,941 (-)NCBI
GRCh371207,076,630 - 207,095,378 (-)ENTREZGENE
HuRef1177,774,904 - 177,793,610 (-)ENTREZGENE
CHM1_11208,349,195 - 208,367,907 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,186,231 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001193338   ⟹   NP_001180267
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,921,941 (-)NCBI
GRCh371207,076,630 - 207,095,378 (-)ENTREZGENE
HuRef1177,774,904 - 177,793,610 (-)ENTREZGENE
CHM1_11208,349,195 - 208,367,764 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,186,231 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001405862   ⟹   NP_001392791
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,923,196 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,187,486 (-)NCBI
RefSeq Acc Id: NM_001405863   ⟹   NP_001392792
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,921,941 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,186,231 (-)NCBI
RefSeq Acc Id: NM_001405864   ⟹   NP_001392793
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,923,196 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,187,486 (-)NCBI
RefSeq Acc Id: NM_001405865   ⟹   NP_001392794
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,921,941 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,186,231 (-)NCBI
RefSeq Acc Id: NM_001405866   ⟹   NP_001392795
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,921,941 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,186,231 (-)NCBI
RefSeq Acc Id: NM_001405867   ⟹   NP_001392796
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,923,196 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,187,486 (-)NCBI
RefSeq Acc Id: NM_001405868   ⟹   NP_001392797
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,921,941 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,186,231 (-)NCBI
RefSeq Acc Id: NM_001405871   ⟹   NP_001392800
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,923,196 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,187,486 (-)NCBI
RefSeq Acc Id: NM_001405886   ⟹   NP_001392815
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,921,941 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,186,231 (-)NCBI
RefSeq Acc Id: NM_001405887   ⟹   NP_001392816
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,923,196 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,187,486 (-)NCBI
RefSeq Acc Id: NM_001405888   ⟹   NP_001392817
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,921,941 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,186,231 (-)NCBI
RefSeq Acc Id: NM_001405889   ⟹   NP_001392818
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,921,941 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,186,231 (-)NCBI
RefSeq Acc Id: NM_001405890   ⟹   NP_001392819
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,921,941 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,186,231 (-)NCBI
RefSeq Acc Id: NM_001405891   ⟹   NP_001392820
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,921,941 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,186,231 (-)NCBI
RefSeq Acc Id: NM_001405892   ⟹   NP_001392821
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,921,941 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,186,231 (-)NCBI
RefSeq Acc Id: NM_005449   ⟹   NP_005440
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,921,941 (-)NCBI
GRCh371207,076,630 - 207,095,378 (-)ENTREZGENE
Build 361205,144,354 - 205,161,966 (-)NCBI Archive
HuRef1177,774,904 - 177,793,610 (-)ENTREZGENE
CHM1_11208,349,195 - 208,367,907 (-)NCBI
T2T-CHM13v2.01206,167,622 - 206,186,231 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047434331   ⟹   XP_047290287
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,903,317 - 206,914,094 (-)NCBI
RefSeq Acc Id: XM_047434334   ⟹   XP_047290290
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,909,735 - 206,921,941 (-)NCBI
RefSeq Acc Id: XM_054339614   ⟹   XP_054195589
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01206,167,622 - 206,178,398 (-)NCBI
RefSeq Acc Id: XM_054339615   ⟹   XP_054195590
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01206,174,039 - 206,186,231 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001135945 (Get FASTA)   NCBI Sequence Viewer  
  NP_001180267 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392791 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392792 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392793 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392794 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392795 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392796 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392797 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392800 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392815 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392816 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392817 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392818 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392819 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392820 (Get FASTA)   NCBI Sequence Viewer  
  NP_001392821 (Get FASTA)   NCBI Sequence Viewer  
  NP_005440 (Get FASTA)   NCBI Sequence Viewer  
  XP_047290287 (Get FASTA)   NCBI Sequence Viewer  
  XP_047290290 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195589 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195590 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC18830 (Get FASTA)   NCBI Sequence Viewer  
  AAH06401 (Get FASTA)   NCBI Sequence Viewer  
  AAP35443 (Get FASTA)   NCBI Sequence Viewer  
  ACX94154 (Get FASTA)   NCBI Sequence Viewer  
  ACX94155 (Get FASTA)   NCBI Sequence Viewer  
  ADK11426 (Get FASTA)   NCBI Sequence Viewer  
  BAF84696 (Get FASTA)   NCBI Sequence Viewer  
  BAH12483 (Get FASTA)   NCBI Sequence Viewer  
  BAH13426 (Get FASTA)   NCBI Sequence Viewer  
  BAH14707 (Get FASTA)   NCBI Sequence Viewer  
  CBX53827 (Get FASTA)   NCBI Sequence Viewer  
  EAW93517 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000356058
  ENSP00000356058.3
  ENSP00000404136
  ENSP00000404136.2
  ENSP00000432936.1
  ENSP00000436316.1
  ENSP00000436799.1
  ENSP00000437331.1
  ENSP00000485739
  ENSP00000485739.1
GenBank Protein O60667 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001135945   ⟸   NM_001142473
- Peptide Label: isoform b
- UniProtKB: B7Z497 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_005440   ⟸   NM_005449
- Peptide Label: isoform a precursor
- UniProtKB: B7Z6Z0 (UniProtKB/Swiss-Prot),   A8K7J2 (UniProtKB/Swiss-Prot),   D9MWM3 (UniProtKB/Swiss-Prot),   O60667 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001180267   ⟸   NM_001193338
- Peptide Label: isoform c precursor
- UniProtKB: O60667 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSP00000436799   ⟸   ENST00000463473
Ensembl Acc Id: ENSP00000436316   ⟸   ENST00000530505
Ensembl Acc Id: ENSP00000404136   ⟸   ENST00000442471
Ensembl Acc Id: ENSP00000485739   ⟸   ENST00000628511
Ensembl Acc Id: ENSP00000356058   ⟸   ENST00000367091
Ensembl Acc Id: ENSP00000432936   ⟸   ENST00000525793
Ensembl Acc Id: ENSP00000437331   ⟸   ENST00000529560
RefSeq Acc Id: XP_047290287   ⟸   XM_047434331
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047290290   ⟸   XM_047434334
- Peptide Label: isoform X2
RefSeq Acc Id: NP_001392816   ⟸   NM_001405887
- Peptide Label: isoform b
RefSeq Acc Id: NP_001392793   ⟸   NM_001405864
- Peptide Label: isoform e precursor
RefSeq Acc Id: NP_001392800   ⟸   NM_001405871
- Peptide Label: isoform a precursor
- UniProtKB: O60667 (UniProtKB/Swiss-Prot),   B7Z6Z0 (UniProtKB/Swiss-Prot),   A8K7J2 (UniProtKB/Swiss-Prot),   D9MWM3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001392791   ⟸   NM_001405862
- Peptide Label: isoform d
RefSeq Acc Id: NP_001392796   ⟸   NM_001405867
- Peptide Label: isoform g precursor
RefSeq Acc Id: NP_001392817   ⟸   NM_001405888
- Peptide Label: isoform j
RefSeq Acc Id: NP_001392819   ⟸   NM_001405890
- Peptide Label: isoform l
RefSeq Acc Id: NP_001392820   ⟸   NM_001405891
- Peptide Label: isoform m
RefSeq Acc Id: NP_001392818   ⟸   NM_001405889
- Peptide Label: isoform k precursor
RefSeq Acc Id: NP_001392821   ⟸   NM_001405892
- Peptide Label: isoform n precursor
RefSeq Acc Id: NP_001392794   ⟸   NM_001405865
- Peptide Label: isoform e precursor
RefSeq Acc Id: NP_001392795   ⟸   NM_001405866
- Peptide Label: isoform f precursor
RefSeq Acc Id: NP_001392797   ⟸   NM_001405868
- Peptide Label: isoform g precursor
RefSeq Acc Id: NP_001392815   ⟸   NM_001405886
- Peptide Label: isoform h
RefSeq Acc Id: NP_001392792   ⟸   NM_001405863
- Peptide Label: isoform d
RefSeq Acc Id: XP_054195589   ⟸   XM_054339614
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054195590   ⟸   XM_054339615
- Peptide Label: isoform X2
Protein Domains
Ig-like   Immunoglobulin subtype   Immunoglobulin V-set

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O60667-F1-model_v2 AlphaFold O60667 1-390 view protein structure

Promoters
RGD ID:6785536
Promoter ID:HG_KWN:7093
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   HeLa_S3,   Lymphoblastoid
Transcripts:OTTHUMT00000088678
Position:
Human AssemblyChrPosition (strand)Source
Build 361205,149,441 - 205,149,972 (-)MPROMDB
RGD ID:6785540
Promoter ID:HG_KWN:7094
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000088967
Position:
Human AssemblyChrPosition (strand)Source
Build 361205,153,801 - 205,155,047 (-)MPROMDB
RGD ID:6785537
Promoter ID:HG_KWN:7095
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   Jurkat,   K562,   Lymphoblastoid
Transcripts:NM_001142473,   NM_005449
Position:
Human AssemblyChrPosition (strand)Source
Build 361205,161,739 - 205,162,239 (-)MPROMDB
RGD ID:6850458
Promoter ID:EP73020
Type:initiation region
Name:HS_TOSO
Description:Regulator of Fas-induced apoptosis.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:NEDO full length human cDNA sequencing project.; Oligo-capping
Position:
Human AssemblyChrPosition (strand)Source
Build 361205,161,909 - 205,161,969EPD
RGD ID:6785535
Promoter ID:HG_KWN:7096
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   Jurkat,   K562,   Lymphoblastoid
Transcripts:NM_001142472
Position:
Human AssemblyChrPosition (strand)Source
Build 361205,163,106 - 205,163,962 (-)MPROMDB
RGD ID:6858814
Promoter ID:EPDNEW_H2572
Type:initiation region
Name:FCMR_1
Description:Fc fragment of IgM receptor
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381206,921,941 - 206,922,001EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:14315 AgrOrtholog
COSMIC FCMR COSMIC
Ensembl Genes ENSG00000162894 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000367091 ENTREZGENE
  ENST00000367091.8 UniProtKB/Swiss-Prot
  ENST00000442471 ENTREZGENE
  ENST00000442471.4 UniProtKB/Swiss-Prot
  ENST00000463473.2 UniProtKB/TrEMBL
  ENST00000525793.5 UniProtKB/TrEMBL
  ENST00000529560.1 UniProtKB/TrEMBL
  ENST00000530505.1 UniProtKB/TrEMBL
  ENST00000628511 ENTREZGENE
  ENST00000628511.2 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000162894 GTEx
HGNC ID HGNC:14315 ENTREZGENE
Human Proteome Map FCMR Human Proteome Map
InterPro CD300_family_receptors UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_V-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:9214 UniProtKB/Swiss-Prot
NCBI Gene 9214 ENTREZGENE
OMIM 606015 OMIM
PANTHER FAS APOPTOTIC INHIBITORY MOLECULE 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  POLYMERIC-IMMUNOGLOBULIN RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam V-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA142671899 PharmGKB
PRINTS F138DOMAIN UniProtKB/TrEMBL
SMART SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A8K7J2 ENTREZGENE
  B7Z497 ENTREZGENE, UniProtKB/TrEMBL
  B7Z6Z0 ENTREZGENE
  D9MWM3 ENTREZGENE
  E9PMT7_HUMAN UniProtKB/TrEMBL
  E9PN59_HUMAN UniProtKB/TrEMBL
  E9PPV1_HUMAN UniProtKB/TrEMBL
  E9PQG1_HUMAN UniProtKB/TrEMBL
  FAIM3_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary A8K7J2 UniProtKB/Swiss-Prot
  B7Z6Z0 UniProtKB/Swiss-Prot
  D9MWM3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-11-08 FCMR  Fc mu receptor  FCMR  Fc fragment of IgM receptor  Symbol and/or name change 19259463 PROVISIONAL
2015-04-28 FCMR  Fc fragment of IgM receptor  FAIM3  Fas apoptotic inhibitory molecule 3  Symbol and/or name change 5135510 APPROVED