ATG13 (autophagy related 13) - Rat Genome Database

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Gene: ATG13 (autophagy related 13) Homo sapiens
Analyze
Symbol: ATG13
Name: autophagy related 13
RGD ID: 1602498
HGNC Page HGNC:29091
Description: Enables protein kinase binding activity and protein serine/threonine kinase activator activity. Involved in several processes, including autophagosome assembly; positive regulation of autophagy; and regulation of protein lipidation. Located in mitochondrion. Part of Atg1/ULK1 kinase complex and phagophore assembly site. Is active in phagophore assembly site membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: ATG13 autophagy related 13 homolog; autophagy-related protein 13; FLJ20698; KIAA0652; PARATARG8
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381146,617,553 - 46,674,518 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1146,617,527 - 46,674,818 (+)EnsemblGRCh38hg38GRCh38
GRCh371146,639,103 - 46,696,068 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361146,595,703 - 46,652,644 (+)NCBINCBI36Build 36hg18NCBI36
Celera1146,786,959 - 46,844,582 (+)NCBICelera
Cytogenetic Map11p11.2NCBI
HuRef1146,345,178 - 46,403,609 (+)NCBIHuRef
CHM1_11146,637,238 - 46,695,980 (+)NCBICHM1_1
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Hepatic interferon regulatory factor 8 expression mediates liver ischemia/reperfusion injury in mice. Shi G, etal., Biochem Pharmacol. 2021 Oct;192:114728. doi: 10.1016/j.bcp.2021.114728. Epub 2021 Aug 13.
5. Mammalian autophagy: core molecular machinery and signaling regulation. Yang Z and Klionsky DJ, Curr Opin Cell Biol. 2010 Apr;22(2):124-31. Epub 2009 Dec 23.
Additional References at PubMed
PMID:8125298   PMID:8619474   PMID:9110174   PMID:9734811   PMID:12107413   PMID:12477932   PMID:14702039   PMID:15489334   PMID:16196087   PMID:16344560   PMID:17204848   PMID:17207965  
PMID:18936157   PMID:19211835   PMID:19225151   PMID:19258318   PMID:19287211   PMID:19597335   PMID:19690328   PMID:20200478   PMID:20562859   PMID:20694011   PMID:21460630   PMID:21460634  
PMID:21475306   PMID:21795849   PMID:21832049   PMID:21855797   PMID:21873635   PMID:21900206   PMID:21976705   PMID:22020285   PMID:23043107   PMID:23262492   PMID:23392225   PMID:23524951  
PMID:24100292   PMID:24270810   PMID:24290141   PMID:25040165   PMID:25126726   PMID:25686248   PMID:25909887   PMID:26018823   PMID:26299944   PMID:26687479   PMID:26687681   PMID:27046250  
PMID:27203176   PMID:27334615   PMID:27387056   PMID:27617292   PMID:28059666   PMID:28195531   PMID:28253953   PMID:28514442   PMID:28611215   PMID:28639909   PMID:28718761   PMID:29196462  
PMID:29313410   PMID:29453315   PMID:29487085   PMID:29634390   PMID:29950492   PMID:30081750   PMID:30404831   PMID:30669939   PMID:30853401   PMID:30853402   PMID:31270922   PMID:31732843  
PMID:31806350   PMID:32035621   PMID:32111227   PMID:32296183   PMID:32320309   PMID:32453962   PMID:32516310   PMID:32529326   PMID:32543267   PMID:32556086   PMID:32668203   PMID:32707033  
PMID:32814053   PMID:33226137   PMID:33368531   PMID:33422265   PMID:33450483   PMID:33499712   PMID:33682133   PMID:33961781   PMID:34226595   PMID:34369648   PMID:34502089   PMID:34524948  
PMID:34917906   PMID:35220397   PMID:35271311   PMID:35487443   PMID:35545034   PMID:35670107   PMID:36169801   PMID:36736316   PMID:36898370   PMID:36931259   PMID:36949045   PMID:37394799  
PMID:37567770   PMID:37689310  


Genomics

Comparative Map Data
ATG13
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381146,617,553 - 46,674,518 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1146,617,527 - 46,674,818 (+)EnsemblGRCh38hg38GRCh38
GRCh371146,639,103 - 46,696,068 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361146,595,703 - 46,652,644 (+)NCBINCBI36Build 36hg18NCBI36
Celera1146,786,959 - 46,844,582 (+)NCBICelera
Cytogenetic Map11p11.2NCBI
HuRef1146,345,178 - 46,403,609 (+)NCBIHuRef
CHM1_11146,637,238 - 46,695,980 (+)NCBICHM1_1
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBIT2T-CHM13v2.0
Atg13
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39291,504,957 - 91,540,947 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl291,504,963 - 91,540,921 (-)EnsemblGRCm39 Ensembl
GRCm38291,674,612 - 91,710,597 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl291,674,618 - 91,710,576 (-)EnsemblGRCm38mm10GRCm38
MGSCv37291,514,782 - 91,550,733 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36291,475,464 - 91,511,415 (-)NCBIMGSCv36mm8
Celera293,064,097 - 93,099,336 (-)NCBICelera
Cytogenetic Map2E1NCBI
cM Map250.63NCBI
Atg13
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8398,102,831 - 98,136,741 (-)NCBIGRCr8
mRatBN7.2377,647,069 - 77,681,028 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl377,645,790 - 77,681,043 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx381,122,107 - 81,156,207 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0389,721,130 - 89,755,231 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0387,572,391 - 87,606,504 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0380,580,549 - 80,614,554 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl380,581,247 - 80,601,410 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0387,279,649 - 87,313,654 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4376,056,642 - 76,090,287 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1375,953,473 - 75,986,537 (-)NCBI
Celera376,851,283 - 76,885,195 (-)NCBICelera
Cytogenetic Map3q24NCBI
Atg13
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554221,398,593 - 1,432,438 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554221,398,646 - 1,432,440 (-)NCBIChiLan1.0ChiLan1.0
ATG13
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2948,833,991 - 48,878,284 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11148,840,876 - 48,898,053 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01146,567,728 - 46,623,609 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11147,126,380 - 47,182,848 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1147,126,380 - 47,182,850 (+)Ensemblpanpan1.1panPan2
ATG13
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11842,834,538 - 42,886,873 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1842,836,755 - 42,886,855 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1841,563,260 - 41,615,540 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01843,490,641 - 43,542,934 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1843,482,301 - 43,542,937 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11842,975,663 - 43,027,961 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01842,531,296 - 42,583,663 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01843,260,591 - 43,313,187 (-)NCBIUU_Cfam_GSD_1.0
Atg13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494720,311,338 - 20,361,623 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365622,423,001 - 2,473,232 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365622,424,398 - 2,473,103 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATG13
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl215,856,860 - 15,916,109 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1215,856,859 - 15,916,122 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2217,207,885 - 17,266,756 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATG13
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1118,651,872 - 18,712,395 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl118,652,998 - 18,712,482 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038115,936,173 - 115,995,623 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Atg13
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247671,924,672 - 1,953,868 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ATG13
37 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 11p13-11.2(chr11:35663578-46959820)x1 copy number loss See cases [RCV000052679] Chr11:35663578..46959820 [GRCh38]
Chr11:35685126..46981371 [GRCh37]
Chr11:35641702..46937947 [NCBI36]
Chr11:11p13-11.2
pathogenic
GRCh38/hg38 11p12-11.2(chr11:36508280-48643003)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052680]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052680]|See cases [RCV000052680] Chr11:36508280..48643003 [GRCh38]
Chr11:36529830..48664555 [GRCh37]
Chr11:36486406..48621131 [NCBI36]
Chr11:11p12-11.2
pathogenic
ATG13:c.790-759C>T single nucleotide variant Malignant melanoma [RCV000069371] Chr11:46664090 [GRCh38]
Chr11:46685640 [GRCh37]
Chr11:46642216 [NCBI36]
Chr11:11p11.2
not provided
ATG13:c.1200G>A single nucleotide variant Malignant melanoma [RCV000069372] Chr11:46668546 [GRCh38]
Chr11:46690096 [GRCh37]
Chr11:46646672 [NCBI36]
Chr11:11p11.2
not provided
NM_001142673.2(ATG13):c.1477-946A>G single nucleotide variant Lung cancer [RCV000110091] Chr11:46671309 [GRCh38]
Chr11:46692859 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1576-1G>C single nucleotide variant Malignant tumor of prostate [RCV000149106] Chr11:46672254 [GRCh38]
Chr11:46693804 [GRCh37]
Chr11:11p11.2
uncertain significance
GRCh38/hg38 11p12-11.2(chr11:41118322-48643003)x1 copy number loss See cases [RCV000135405] Chr11:41118322..48643003 [GRCh38]
Chr11:41139872..48664555 [GRCh37]
Chr11:41096448..48621131 [NCBI36]
Chr11:11p12-11.2
pathogenic
GRCh38/hg38 11p12-11.12(chr11:39179252-49135735)x1 copy number loss See cases [RCV000137391] Chr11:39179252..49135735 [GRCh38]
Chr11:39200802..49157287 [GRCh37]
Chr11:39157378..49113863 [NCBI36]
Chr11:11p12-11.12
pathogenic
GRCh38/hg38 11p12-11.12(chr11:42727555-49135735)x3 copy number gain See cases [RCV000139422] Chr11:42727555..49135735 [GRCh38]
Chr11:42749105..49157287 [GRCh37]
Chr11:42705681..49113863 [NCBI36]
Chr11:11p12-11.12
likely pathogenic
GRCh38/hg38 11p11.2(chr11:46420955-46728372)x3 copy number gain See cases [RCV000141333] Chr11:46420955..46728372 [GRCh38]
Chr11:46442505..46749922 [GRCh37]
Chr11:46399081..46706498 [NCBI36]
Chr11:11p11.2
uncertain significance
GRCh37/hg19 11p12-11.2(chr11:42475897-48372559)x1 copy number loss See cases [RCV000446383] Chr11:42475897..48372559 [GRCh37]
Chr11:11p12-11.2
pathogenic
GRCh37/hg19 11p11.2(chr11:46560809-46720908)x1 copy number loss See cases [RCV000447241] Chr11:46560809..46720908 [GRCh37]
Chr11:11p11.2
uncertain significance
GRCh37/hg19 11p14.2-11.12(chr11:26574629-50508019)x3 copy number gain See cases [RCV000448603] Chr11:26574629..50508019 [GRCh37]
Chr11:11p14.2-11.12
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470) copy number gain See cases [RCV000511729] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470)x3 copy number gain See cases [RCV000510881] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
NM_001346311.2(ATG13):c.486T>A (p.Ser162Arg) single nucleotide variant not specified [RCV004316771] Chr11:46656260 [GRCh38]
Chr11:46677810 [GRCh37]
Chr11:11p11.2
uncertain significance
Single allele deletion not provided [RCV000677957] Chr11:46560512..46704422 [GRCh38]
Chr11:46582062..46725972 [GRCh37]
Chr11:11p11.2
uncertain significance
GRCh37/hg19 11p11.2(chr11:46502259-46745473)x3 copy number gain not provided [RCV000683320] Chr11:46502259..46745473 [GRCh37]
Chr11:11p11.2
uncertain significance
GRCh37/hg19 11p15.5-q25(chr11:198510-134934063)x3 copy number gain not provided [RCV000737348] Chr11:198510..134934063 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:70864-134938470)x3 copy number gain not provided [RCV000749874] Chr11:70864..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
NM_001346311.2(ATG13):c.1167T>C (p.Ser389=) single nucleotide variant not provided [RCV000959910] Chr11:46667803 [GRCh38]
Chr11:46689353 [GRCh37]
Chr11:11p11.2
benign
GRCh37/hg19 11p11.2(chr11:46302171-46783079)x3 copy number gain not provided [RCV000846414] Chr11:46302171..46783079 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.129T>A (p.Ser43=) single nucleotide variant not provided [RCV000972484] Chr11:46645398 [GRCh38]
Chr11:46666948 [GRCh37]
Chr11:11p11.2
benign
NC_000011.10:g.(?_46366257)_(46744577_?)dup duplication not provided [RCV001032651] Chr11:46387807..46766127 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.652C>T (p.Arg218Cys) single nucleotide variant not specified [RCV004683984] Chr11:46657579 [GRCh38]
Chr11:46679129 [GRCh37]
Chr11:11p11.2
uncertain significance
GRCh37/hg19 11p11.2(chr11:46418839-46753136)x3 copy number gain not provided [RCV001259094] Chr11:46418839..46753136 [GRCh37]
Chr11:11p11.2
uncertain significance
Single allele deletion Intellectual disability [RCV001293382] Chr11:118359328..118372573 [GRCh37]
Chr11:11p15.3-q23.3
pathogenic
NC_000011.9:g.(?_46569796)_(46742390_?)dup duplication not provided [RCV001346673] Chr11:46569796..46742390 [GRCh37]
Chr11:11p11.2
uncertain significance
NC_000011.9:g.(?_45827353)_(47804770_?)dup duplication Leukocyte adhesion deficiency type II [RCV001296459] Chr11:45827353..47804770 [GRCh37]
Chr11:11p11.2
uncertain significance
GRCh37/hg19 11p11.2(chr11:46248477-46748132) copy number loss not specified [RCV002052926] Chr11:46248477..46748132 [GRCh37]
Chr11:11p11.2
uncertain significance
GRCh37/hg19 11p11.2(chr11:46560809-46720908) copy number loss not specified [RCV002052927] Chr11:46560809..46720908 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.112T>G (p.Cys38Gly) single nucleotide variant not specified [RCV004683986] Chr11:46645381 [GRCh38]
Chr11:46666931 [GRCh37]
Chr11:11p11.2
uncertain significance
GRCh37/hg19 11p12-11.2(chr11:40117145-46920718)x1 copy number loss not provided [RCV001836486] Chr11:40117145..46920718 [GRCh37]
Chr11:11p12-11.2
pathogenic
NC_000011.9:g.(?_46318032)_(46761066_?)dup duplication not provided [RCV001997118] Chr11:46318032..46761066 [GRCh37]
Chr11:11p11.2
uncertain significance
NC_000011.9:g.(?_45827353)_(47804770_?)del deletion Leukocyte adhesion deficiency type II [RCV003119908] Chr11:45827353..47804770 [GRCh37]
Chr11:11p11.2
pathogenic
GRCh37/hg19 11p11.2-q12.2(chr11:51581311-54891247)x3 copy number gain See cases [RCV002286338] Chr11:51581311..54891247 [GRCh37]
Chr11:11p11.2-q12.2
pathogenic
GRCh37/hg19 11p13-q25(chr11:32799481-134938470)x3 copy number gain MISSED ABORTION [RCV002282973] Chr11:32799481..134938470 [GRCh37]
Chr11:11p13-q25
pathogenic
NM_001346311.2(ATG13):c.347C>T (p.Thr116Met) single nucleotide variant not specified [RCV004210691] Chr11:46650206 [GRCh38]
Chr11:46671756 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1166G>A (p.Ser389Asn) single nucleotide variant not specified [RCV004236808] Chr11:46667802 [GRCh38]
Chr11:46689352 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.689A>G (p.Asn230Ser) single nucleotide variant not specified [RCV004235690] Chr11:46657616 [GRCh38]
Chr11:46679166 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1372G>A (p.Gly458Ser) single nucleotide variant not specified [RCV004240016] Chr11:46668836 [GRCh38]
Chr11:46690386 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.41A>G (p.Asp14Gly) single nucleotide variant not specified [RCV004240161] Chr11:46644332 [GRCh38]
Chr11:46665882 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.551C>G (p.Thr184Ser) single nucleotide variant not specified [RCV004110034] Chr11:46657146 [GRCh38]
Chr11:46678696 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1177G>A (p.Ala393Thr) single nucleotide variant not specified [RCV004191325] Chr11:46667813 [GRCh38]
Chr11:46689363 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1502G>A (p.Arg501Gln) single nucleotide variant not specified [RCV004108732] Chr11:46669459 [GRCh38]
Chr11:46691009 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1394C>T (p.Ser465Phe) single nucleotide variant not specified [RCV004191749] Chr11:46668858 [GRCh38]
Chr11:46690408 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.653G>A (p.Arg218His) single nucleotide variant not specified [RCV004191816] Chr11:46657580 [GRCh38]
Chr11:46679130 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.64C>G (p.Leu22Val) single nucleotide variant not specified [RCV004224785] Chr11:46644355 [GRCh38]
Chr11:46665905 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.131C>T (p.Ser44Phe) single nucleotide variant not specified [RCV004199439] Chr11:46645400 [GRCh38]
Chr11:46666950 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.898T>G (p.Ser300Ala) single nucleotide variant not specified [RCV004149109] Chr11:46664858 [GRCh38]
Chr11:46686408 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1631C>A (p.Ala544Asp) single nucleotide variant not specified [RCV004251856] Chr11:46672310 [GRCh38]
Chr11:46693860 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.524C>T (p.Thr175Ile) single nucleotide variant not specified [RCV004279433] Chr11:46657119 [GRCh38]
Chr11:46678669 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1285A>T (p.Met429Leu) single nucleotide variant not specified [RCV004358257] Chr11:46668532 [GRCh38]
Chr11:46690082 [GRCh37]
Chr11:11p11.2
uncertain significance
GRCh37/hg19 11p11.2(chr11:46556948-46825148)x3 copy number gain not provided [RCV003484840] Chr11:46556948..46825148 [GRCh37]
Chr11:11p11.2
uncertain significance
GRCh37/hg19 11p11.2(chr11:46636234-47048768)x3 copy number gain not provided [RCV003484841] Chr11:46636234..47048768 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.766T>C (p.Phe256Leu) single nucleotide variant not specified [RCV004423261] Chr11:46659462 [GRCh38]
Chr11:46681012 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.980A>G (p.Asn327Ser) single nucleotide variant not specified [RCV004423265] Chr11:46664940 [GRCh38]
Chr11:46686490 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.769T>C (p.Ser257Pro) single nucleotide variant not specified [RCV004423262] Chr11:46659465 [GRCh38]
Chr11:46681015 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.865G>A (p.Ala289Thr) single nucleotide variant not specified [RCV004423263] Chr11:46664072 [GRCh38]
Chr11:46685622 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1421A>G (p.His474Arg) single nucleotide variant not specified [RCV004423259] Chr11:46668885 [GRCh38]
Chr11:46690435 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1474C>T (p.Leu492Phe) single nucleotide variant not specified [RCV004423260] Chr11:46669431 [GRCh38]
Chr11:46690981 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.931G>T (p.Val311Phe) single nucleotide variant not specified [RCV004423264] Chr11:46664891 [GRCh38]
Chr11:46686441 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1300A>G (p.Asn434Asp) single nucleotide variant not specified [RCV004423258] Chr11:46668547 [GRCh38]
Chr11:46690097 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1127C>T (p.Pro376Leu) single nucleotide variant not specified [RCV004667684] Chr11:46665510 [GRCh38]
Chr11:46687060 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.167A>G (p.Lys56Arg) single nucleotide variant not specified [RCV004667695] Chr11:46645886 [GRCh38]
Chr11:46667436 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1478C>T (p.Pro493Leu) single nucleotide variant not specified [RCV004667715] Chr11:46669435 [GRCh38]
Chr11:46690985 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.931G>A (p.Val311Ile) single nucleotide variant not specified [RCV004667690] Chr11:46664891 [GRCh38]
Chr11:46686441 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.1552G>A (p.Ala518Thr) single nucleotide variant not specified [RCV004667701] Chr11:46669509 [GRCh38]
Chr11:46691059 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.723A>G (p.Ile241Met) single nucleotide variant not specified [RCV004667708] Chr11:46659419 [GRCh38]
Chr11:46680969 [GRCh37]
Chr11:11p11.2
uncertain significance
NM_001346311.2(ATG13):c.299G>T (p.Cys100Phe) single nucleotide variant not specified [RCV004667676] Chr11:46649165 [GRCh38]
Chr11:46670715 [GRCh37]
Chr11:11p11.2
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:14628
Count of miRNA genes:1305
Interacting mature miRNAs:1700
Transcripts:ENST00000312040, ENST00000359513, ENST00000395549, ENST00000434074, ENST00000451945, ENST00000524625, ENST00000525009, ENST00000525850, ENST00000526485, ENST00000526508, ENST00000526715, ENST00000527907, ENST00000528145, ENST00000528494, ENST00000528704, ENST00000528984, ENST00000529395, ENST00000529655, ENST00000530500, ENST00000530942, ENST00000531933, ENST00000532067, ENST00000533316, ENST00000533325, ENST00000534610, ENST00000577256, ENST00000578626, ENST00000579280, ENST00000580238, ENST00000581416, ENST00000581438, ENST00000582547, ENST00000583249
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407090882GWAS739858_HHeadache QTL GWAS739858 (human)4e-08Headache114667393346673934Human
407333987GWAS982963_Hdiastolic blood pressure QTL GWAS982963 (human)1e-09diastolic blood pressurediastolic blood pressure (CMO:0000005)114662710946627110Human
407229903GWAS878879_Hbone density QTL GWAS878879 (human)1e-300bone mineral mass (VT:0005007)bone mineral density (CMO:0001226)114665531546655316Human
407229902GWAS878878_Hbone density QTL GWAS878878 (human)1e-300bone mineral mass (VT:0005007)bone mineral density (CMO:0001226)114664208146642082Human
407175915GWAS824891_Hnon-melanoma skin carcinoma QTL GWAS824891 (human)0.000003non-melanoma skin carcinoma114663285446632855Human
407279977GWAS928953_Hbody height QTL GWAS928953 (human)5e-22body height (VT:0001253)body height (CMO:0000106)114667018746670188Human
407206933GWAS855909_Happendicular lean mass QTL GWAS855909 (human)2e-11appendicular lean mass114662816946628170Human
407229904GWAS878880_Hbone density QTL GWAS878880 (human)1e-300bone mineral mass (VT:0005007)bone mineral density (CMO:0001226)114666203446662037Human
407330546GWAS979522_HAlzheimer disease, polygenic risk score QTL GWAS979522 (human)3e-08Alzheimer disease, polygenic risk score114667018746670188Human
406943028GWAS592004_Hreaction time measurement QTL GWAS592004 (human)7e-09reaction time measurement114667018746670188Human
407323807GWAS972783_Hsystolic blood pressure QTL GWAS972783 (human)4e-09systolic blood pressuresystolic blood pressure (CMO:0000004)114662710946627110Human
407087834GWAS736810_Hage at first sexual intercourse measurement QTL GWAS736810 (human)5e-09age at first sexual intercourse measurement114665480746654808Human
407005086GWAS654062_Hinterleukin 17 measurement QTL GWAS654062 (human)0.000008interleukin 17 measurement114667005546670056Human

Markers in Region
D11S3306  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371146,694,896 - 46,695,219UniSTSGRCh37
Build 361146,651,472 - 46,651,795RGDNCBI36
Celera1146,843,110 - 46,843,433RGD
Cytogenetic Map11p11.2UniSTS
HuRef1146,400,936 - 46,401,259UniSTS
T16117  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371146,695,873 - 46,696,029UniSTSGRCh37
Build 361146,652,449 - 46,652,605RGDNCBI36
Celera1146,844,087 - 46,844,243RGD
Cytogenetic Map11p11.2UniSTS
HuRef1146,401,913 - 46,402,069UniSTS
Whitehead-YAC Contig Map11 UniSTS
D11S2311E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371146,694,340 - 46,694,500UniSTSGRCh37
Build 361146,650,916 - 46,651,076RGDNCBI36
Celera1146,842,554 - 46,842,714RGD
Cytogenetic Map11p11.2UniSTS
HuRef1146,400,380 - 46,400,540UniSTS
GeneMap99-GB4 RH Map11167.08UniSTS
NCBI RH Map11285.0UniSTS
RH15977  
Human AssemblyChrPosition (strand)SourceJBrowse
Celera1146,842,518 - 46,842,704RGD
Cytogenetic Map11p11.2UniSTS
HuRef1146,400,344 - 46,400,530UniSTS
GeneMap99-GB4 RH Map11163.64UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_051811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001142673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001205119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001205120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001205121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001205122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346337 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_014741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_144422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_144423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_144424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005253265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005253266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005253268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006718396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011520493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011520496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011520499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011520500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011520502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017018599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017018603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017018607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017018618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB014552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC115088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC127035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF052175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK000705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK023867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK223603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK289641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK315925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX883319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC001331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD675643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA195671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000359513   ⟹   ENSP00000352500
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,596 - 46,674,818 (+)Ensembl
Ensembl Acc Id: ENST00000395549   ⟹   ENSP00000378919
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,791 - 46,657,191 (+)Ensembl
Ensembl Acc Id: ENST00000524625   ⟹   ENSP00000433543
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,577 - 46,674,520 (+)Ensembl
Ensembl Acc Id: ENST00000525009   ⟹   ENSP00000436174
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,664,000 - 46,669,441 (+)Ensembl
Ensembl Acc Id: ENST00000525850
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,648,727 - 46,657,618 (+)Ensembl
Ensembl Acc Id: ENST00000526485
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,672,795 - 46,674,513 (+)Ensembl
Ensembl Acc Id: ENST00000526508   ⟹   ENSP00000431974
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,563 - 46,674,520 (+)Ensembl
Ensembl Acc Id: ENST00000526715
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,545 - 46,630,022 (+)Ensembl
Ensembl Acc Id: ENST00000527907
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,656,953 - 46,667,865 (+)Ensembl
Ensembl Acc Id: ENST00000528145
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,644,337 - 46,656,398 (+)Ensembl
Ensembl Acc Id: ENST00000528494   ⟹   ENSP00000432412
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,600 - 46,672,726 (+)Ensembl
Ensembl Acc Id: ENST00000528704
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,657,060 - 46,659,402 (+)Ensembl
Ensembl Acc Id: ENST00000528984
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,656,951 - 46,664,149 (+)Ensembl
Ensembl Acc Id: ENST00000529395   ⟹   ENSP00000431877
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,665,509 - 46,669,532 (+)Ensembl
Ensembl Acc Id: ENST00000529655   ⟹   ENSP00000433756
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,541 - 46,673,041 (+)Ensembl
Ensembl Acc Id: ENST00000530500   ⟹   ENSP00000434390
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,563 - 46,672,660 (+)Ensembl
Ensembl Acc Id: ENST00000530942
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,578 - 46,630,028 (+)Ensembl
Ensembl Acc Id: ENST00000531933   ⟹   ENSP00000434125
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,659,422 - 46,672,773 (+)Ensembl
Ensembl Acc Id: ENST00000532067   ⟹   ENSP00000437191
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,667,872 - 46,668,882 (+)Ensembl
Ensembl Acc Id: ENST00000533316
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,659,335 - 46,668,890 (+)Ensembl
Ensembl Acc Id: ENST00000533325   ⟹   ENSP00000436931
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,549 - 46,650,216 (+)Ensembl
Ensembl Acc Id: ENST00000534610
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,582 - 46,660,029 (+)Ensembl
Ensembl Acc Id: ENST00000577256   ⟹   ENSP00000462167
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,568 - 46,645,889 (+)Ensembl
Ensembl Acc Id: ENST00000578626   ⟹   ENSP00000462644
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,568 - 46,645,369 (+)Ensembl
Ensembl Acc Id: ENST00000579280
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,535 - 46,625,364 (+)Ensembl
Ensembl Acc Id: ENST00000580238   ⟹   ENSP00000463808
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,527 - 46,645,367 (+)Ensembl
Ensembl Acc Id: ENST00000581416   ⟹   ENSP00000464274
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,536 - 46,645,419 (+)Ensembl
Ensembl Acc Id: ENST00000581438   ⟹   ENSP00000463550
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,557 - 46,644,331 (+)Ensembl
Ensembl Acc Id: ENST00000582547   ⟹   ENSP00000464091
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,585 - 46,645,383 (+)Ensembl
Ensembl Acc Id: ENST00000583249   ⟹   ENSP00000463998
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,557 - 46,645,350 (+)Ensembl
Ensembl Acc Id: ENST00000683050   ⟹   ENSP00000507809
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1146,617,553 - 46,674,518 (+)Ensembl
RefSeq Acc Id: NM_001142673   ⟹   NP_001136145
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
GRCh371146,638,826 - 46,697,569 (+)ENTREZGENE
GRCh371146,638,826 - 46,697,569 (+)NCBI
Celera1146,786,959 - 46,844,582 (+)RGD
HuRef1146,345,178 - 46,403,609 (+)ENTREZGENE
CHM1_11146,637,238 - 46,695,980 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001205119   ⟹   NP_001192048
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
GRCh371146,638,826 - 46,697,569 (+)NCBI
HuRef1146,345,178 - 46,403,609 (+)ENTREZGENE
CHM1_11146,637,238 - 46,695,980 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001205120   ⟹   NP_001192049
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
GRCh371146,638,826 - 46,697,569 (+)NCBI
HuRef1146,345,178 - 46,403,609 (+)ENTREZGENE
CHM1_11146,637,238 - 46,695,980 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001205121   ⟹   NP_001192050
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
GRCh371146,638,826 - 46,697,569 (+)NCBI
HuRef1146,345,178 - 46,403,609 (+)ENTREZGENE
CHM1_11146,637,238 - 46,695,980 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001205122   ⟹   NP_001192051
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
GRCh371146,638,826 - 46,697,569 (+)NCBI
HuRef1146,345,178 - 46,403,609 (+)ENTREZGENE
CHM1_11146,637,238 - 46,695,980 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346311   ⟹   NP_001333240
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346312   ⟹   NP_001333241
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346313   ⟹   NP_001333242
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346314   ⟹   NP_001333243
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346315   ⟹   NP_001333244
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346316   ⟹   NP_001333245
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346317   ⟹   NP_001333246
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346318   ⟹   NP_001333247
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346319   ⟹   NP_001333248
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346320   ⟹   NP_001333249
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346321   ⟹   NP_001333250
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346322   ⟹   NP_001333251
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346323   ⟹   NP_001333252
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346324   ⟹   NP_001333253
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346325   ⟹   NP_001333254
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346326   ⟹   NP_001333255
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346327   ⟹   NP_001333256
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346328   ⟹   NP_001333257
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346329   ⟹   NP_001333258
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346330   ⟹   NP_001333259
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346331   ⟹   NP_001333260
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346332   ⟹   NP_001333261
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346333   ⟹   NP_001333262
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346334   ⟹   NP_001333263
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346335   ⟹   NP_001333264
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346336   ⟹   NP_001333265
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346337   ⟹   NP_001333266
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346338   ⟹   NP_001333267
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346340   ⟹   NP_001333269
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346342   ⟹   NP_001333271
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346344   ⟹   NP_001333273
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346346   ⟹   NP_001333275
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346348   ⟹   NP_001333277
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346349   ⟹   NP_001333278
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346350   ⟹   NP_001333279
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346351   ⟹   NP_001333280
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346352   ⟹   NP_001333281
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346353   ⟹   NP_001333282
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346354   ⟹   NP_001333283
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346355   ⟹   NP_001333284
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346356   ⟹   NP_001333285
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346357   ⟹   NP_001333286
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346358   ⟹   NP_001333287
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346359   ⟹   NP_001333288
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346360   ⟹   NP_001333289
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NM_014741   ⟹   NP_055556
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
GRCh371146,638,826 - 46,697,569 (+)ENTREZGENE
GRCh371146,638,826 - 46,697,569 (+)NCBI
Build 361146,595,703 - 46,652,644 (+)NCBI Archive
Celera1146,786,959 - 46,844,582 (+)RGD
HuRef1146,345,178 - 46,403,609 (+)ENTREZGENE
CHM1_11146,637,238 - 46,695,980 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NR_144422
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NR_144423
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
RefSeq Acc Id: NR_144424
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,553 - 46,674,518 (+)NCBI
T2T-CHM13v2.01146,773,592 - 46,830,534 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001136145 (Get FASTA)   NCBI Sequence Viewer  
  NP_001192048 (Get FASTA)   NCBI Sequence Viewer  
  NP_001192049 (Get FASTA)   NCBI Sequence Viewer  
  NP_001192050 (Get FASTA)   NCBI Sequence Viewer  
  NP_001192051 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333240 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333241 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333242 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333243 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333244 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333245 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333246 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333247 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333248 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333249 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333250 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333251 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333252 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333253 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333254 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333255 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333256 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333257 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333258 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333259 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333260 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333261 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333262 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333263 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333264 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333265 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333266 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333267 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333269 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333271 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333273 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333275 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333277 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333278 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333279 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333280 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333281 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333282 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333283 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333284 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333285 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333286 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333287 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333288 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333289 (Get FASTA)   NCBI Sequence Viewer  
  NP_055556 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH01331 (Get FASTA)   NCBI Sequence Viewer  
  AAH02378 (Get FASTA)   NCBI Sequence Viewer  
  AAH06191 (Get FASTA)   NCBI Sequence Viewer  
  BAA31627 (Get FASTA)   NCBI Sequence Viewer  
  BAB14707 (Get FASTA)   NCBI Sequence Viewer  
  BAD97323 (Get FASTA)   NCBI Sequence Viewer  
  BAF82330 (Get FASTA)   NCBI Sequence Viewer  
  BAF85798 (Get FASTA)   NCBI Sequence Viewer  
  BAG57445 (Get FASTA)   NCBI Sequence Viewer  
  BAG59157 (Get FASTA)   NCBI Sequence Viewer  
  BAH14296 (Get FASTA)   NCBI Sequence Viewer  
  CAE91926 (Get FASTA)   NCBI Sequence Viewer  
  EAW67985 (Get FASTA)   NCBI Sequence Viewer  
  EAW67986 (Get FASTA)   NCBI Sequence Viewer  
  EAW67987 (Get FASTA)   NCBI Sequence Viewer  
  EAW67988 (Get FASTA)   NCBI Sequence Viewer  
  EAW67989 (Get FASTA)   NCBI Sequence Viewer  
  EAW67990 (Get FASTA)   NCBI Sequence Viewer  
  EAW67991 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000352500
  ENSP00000352500.4
  ENSP00000378919.3
  ENSP00000431877.1
  ENSP00000431974
  ENSP00000431974.1
  ENSP00000432412
  ENSP00000432412.1
  ENSP00000433543
  ENSP00000433543.1
  ENSP00000433756
  ENSP00000433756.1
  ENSP00000434125.1
  ENSP00000434390
  ENSP00000434390.1
  ENSP00000436174.1
  ENSP00000436931.1
  ENSP00000437191.1
  ENSP00000462167.1
  ENSP00000462644.1
  ENSP00000463550.1
  ENSP00000463808.1
  ENSP00000463998.1
  ENSP00000464091.1
  ENSP00000464274.1
  ENSP00000507809
  ENSP00000507809.1
GenBank Protein O75143 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_055556   ⟸   NM_014741
- Peptide Label: isoform f
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001136145   ⟸   NM_001142673
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001192050   ⟸   NM_001205121
- Peptide Label: isoform f
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001192048   ⟸   NM_001205119
- Peptide Label: isoform a
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001192049   ⟸   NM_001205120
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001192051   ⟸   NM_001205122
- Peptide Label: isoform h
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333248   ⟸   NM_001346319
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333257   ⟸   NM_001346328
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333244   ⟸   NM_001346315
- Peptide Label: isoform a
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333262   ⟸   NM_001346333
- Peptide Label: isoform d
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333279   ⟸   NM_001346350
- Peptide Label: isoform f
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333249   ⟸   NM_001346320
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333251   ⟸   NM_001346322
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333252   ⟸   NM_001346323
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333277   ⟸   NM_001346348
- Peptide Label: isoform f
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333243   ⟸   NM_001346314
- Peptide Label: isoform a
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333254   ⟸   NM_001346325
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333273   ⟸   NM_001346344
- Peptide Label: isoform f
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333286   ⟸   NM_001346357
- Peptide Label: isoform i
- UniProtKB: B4DKE5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333241   ⟸   NM_001346312
- Peptide Label: isoform a
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333253   ⟸   NM_001346324
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333267   ⟸   NM_001346338
- Peptide Label: isoform e
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333265   ⟸   NM_001346336
- Peptide Label: isoform d
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333282   ⟸   NM_001346353
- Peptide Label: isoform f
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333261   ⟸   NM_001346332
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333278   ⟸   NM_001346349
- Peptide Label: isoform f
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333258   ⟸   NM_001346329
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333242   ⟸   NM_001346313
- Peptide Label: isoform a
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333259   ⟸   NM_001346330
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333275   ⟸   NM_001346346
- Peptide Label: isoform f
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333256   ⟸   NM_001346327
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333266   ⟸   NM_001346337
- Peptide Label: isoform d
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333285   ⟸   NM_001346356
- Peptide Label: isoform g
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333250   ⟸   NM_001346321
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333245   ⟸   NM_001346316
- Peptide Label: isoform a
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333260   ⟸   NM_001346331
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333281   ⟸   NM_001346352
- Peptide Label: isoform f
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333255   ⟸   NM_001346326
- Peptide Label: isoform c
- UniProtKB: Q9BRL3 (UniProtKB/Swiss-Prot),   Q53EN6 (UniProtKB/Swiss-Prot),   E9PQZ8 (UniProtKB/Swiss-Prot),   D3DQQ2 (UniProtKB/Swiss-Prot),   D3DQQ1 (UniProtKB/Swiss-Prot),   B4DFI4 (UniProtKB/Swiss-Prot),   Q9H8B0 (UniProtKB/Swiss-Prot),   O75143 (UniProtKB/Swiss-Prot),   A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333271   ⟸   NM_001346342
- Peptide Label: isoform f
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333280   ⟸   NM_001346351
- Peptide Label: isoform f
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333288   ⟸   NM_001346359
- Peptide Label: isoform i
- UniProtKB: B4DKE5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333289   ⟸   NM_001346360
- Peptide Label: isoform j
- UniProtKB: B4DKE5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333240   ⟸   NM_001346311
- Peptide Label: isoform a
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333247   ⟸   NM_001346318
- Peptide Label: isoform b
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333269   ⟸   NM_001346340
- Peptide Label: isoform e
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333263   ⟸   NM_001346334
- Peptide Label: isoform d
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333284   ⟸   NM_001346355
- Peptide Label: isoform g
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333287   ⟸   NM_001346358
- Peptide Label: isoform i
- UniProtKB: B4DKE5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333246   ⟸   NM_001346317
- Peptide Label: isoform b
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333264   ⟸   NM_001346335
- Peptide Label: isoform d
- UniProtKB: A8K0S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001333283   ⟸   NM_001346354
- Peptide Label: isoform f
- UniProtKB: A8KAP4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000352500   ⟸   ENST00000359513
Ensembl Acc Id: ENSP00000463808   ⟸   ENST00000580238
Ensembl Acc Id: ENSP00000464274   ⟸   ENST00000581416
Ensembl Acc Id: ENSP00000463550   ⟸   ENST00000581438
Ensembl Acc Id: ENSP00000464091   ⟸   ENST00000582547
Ensembl Acc Id: ENSP00000463998   ⟸   ENST00000583249
Ensembl Acc Id: ENSP00000434390   ⟸   ENST00000530500
Ensembl Acc Id: ENSP00000434125   ⟸   ENST00000531933
Ensembl Acc Id: ENSP00000437191   ⟸   ENST00000532067
Ensembl Acc Id: ENSP00000436931   ⟸   ENST00000533325
Ensembl Acc Id: ENSP00000462167   ⟸   ENST00000577256
Ensembl Acc Id: ENSP00000433543   ⟸   ENST00000524625
Ensembl Acc Id: ENSP00000462644   ⟸   ENST00000578626
Ensembl Acc Id: ENSP00000436174   ⟸   ENST00000525009
Ensembl Acc Id: ENSP00000431974   ⟸   ENST00000526508
Ensembl Acc Id: ENSP00000378919   ⟸   ENST00000395549
Ensembl Acc Id: ENSP00000432412   ⟸   ENST00000528494
Ensembl Acc Id: ENSP00000433756   ⟸   ENST00000529655
Ensembl Acc Id: ENSP00000431877   ⟸   ENST00000529395
Ensembl Acc Id: ENSP00000507809   ⟸   ENST00000683050
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O75143-F1-model_v2 AlphaFold O75143 1-517 view protein structure

Promoters
RGD ID:6788829
Promoter ID:HG_KWN:12766
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000359513,   ENST00000395549,   NM_001142673,   NM_014741,   NR_024587,   NR_024588,   NR_024589,   UC001NCY.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361146,595,206 - 46,595,937 (+)MPROMDB
RGD ID:7220191
Promoter ID:EPDNEW_H15841
Type:initiation region
Name:ATG13_2
Description:autophagy related 13
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H15842  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,305 - 46,617,365EPDNEW
RGD ID:7220193
Promoter ID:EPDNEW_H15842
Type:initiation region
Name:ATG13_1
Description:autophagy related 13
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H15841  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381146,617,563 - 46,617,623EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:29091 AgrOrtholog
COSMIC ATG13 COSMIC
Ensembl Genes ENSG00000175224 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000359513 ENTREZGENE
  ENST00000359513.8 UniProtKB/Swiss-Prot
  ENST00000395549.3 UniProtKB/TrEMBL
  ENST00000524625 ENTREZGENE
  ENST00000524625.5 UniProtKB/Swiss-Prot
  ENST00000525009.5 UniProtKB/TrEMBL
  ENST00000526508 ENTREZGENE
  ENST00000526508.5 UniProtKB/Swiss-Prot
  ENST00000528494 ENTREZGENE
  ENST00000528494.5 UniProtKB/Swiss-Prot
  ENST00000529395.1 UniProtKB/TrEMBL
  ENST00000529655 ENTREZGENE
  ENST00000529655.5 UniProtKB/Swiss-Prot
  ENST00000530500 ENTREZGENE
  ENST00000530500.5 UniProtKB/Swiss-Prot
  ENST00000531933.1 UniProtKB/TrEMBL
  ENST00000532067.1 UniProtKB/TrEMBL
  ENST00000533325.5 UniProtKB/TrEMBL
  ENST00000577256.5 UniProtKB/TrEMBL
  ENST00000578626.5 UniProtKB/TrEMBL
  ENST00000580238.5 UniProtKB/TrEMBL
  ENST00000581416.5 UniProtKB/TrEMBL
  ENST00000581438.5 UniProtKB/TrEMBL
  ENST00000582547.5 UniProtKB/TrEMBL
  ENST00000583249.5 UniProtKB/TrEMBL
  ENST00000683050 ENTREZGENE
  ENST00000683050.1 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.900.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000175224 GTEx
HGNC ID HGNC:29091 ENTREZGENE
Human Proteome Map ATG13 Human Proteome Map
InterPro ATG13 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Atg13_N UniProtKB/TrEMBL
  HORMA_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:9776 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 9776 ENTREZGENE
OMIM 615088 OMIM
PANTHER AUTOPHAGY-RELATED PROTEIN 13 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13430 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ATG13 UniProtKB/TrEMBL
PharmGKB PA165543187 PharmGKB
UniProt A0A1B0GXJ3_HUMAN UniProtKB/TrEMBL
  A8K0S6 ENTREZGENE, UniProtKB/TrEMBL
  A8KAP4 ENTREZGENE, UniProtKB/TrEMBL
  ATG13_HUMAN UniProtKB/Swiss-Prot
  B4DFI4 ENTREZGENE
  B4DKE5 ENTREZGENE, UniProtKB/TrEMBL
  D3DQQ1 ENTREZGENE
  D3DQQ2 ENTREZGENE
  E9PPR2_HUMAN UniProtKB/TrEMBL
  E9PQZ8 ENTREZGENE
  H0YCL5_HUMAN UniProtKB/TrEMBL
  H0YDR0_HUMAN UniProtKB/TrEMBL
  H0YEM7_HUMAN UniProtKB/TrEMBL
  H0YF43_HUMAN UniProtKB/TrEMBL
  J3KRU6_HUMAN UniProtKB/TrEMBL
  J3KST9_HUMAN UniProtKB/TrEMBL
  J3QLH7_HUMAN UniProtKB/TrEMBL
  J3QR16_HUMAN UniProtKB/TrEMBL
  J3QR83_HUMAN UniProtKB/TrEMBL
  J3QRL1_HUMAN UniProtKB/TrEMBL
  J9JIF6_HUMAN UniProtKB/TrEMBL
  O75143 ENTREZGENE
  Q53EN6 ENTREZGENE
  Q9BRL3 ENTREZGENE
  Q9H8B0 ENTREZGENE
UniProt Secondary A0A0A6YYP5 UniProtKB/TrEMBL
  A0A0K0K1D0 UniProtKB/TrEMBL
  B4DFI4 UniProtKB/Swiss-Prot
  D3DQQ1 UniProtKB/Swiss-Prot
  D3DQQ2 UniProtKB/Swiss-Prot
  E9PQZ8 UniProtKB/Swiss-Prot
  J3QQM8 UniProtKB/TrEMBL
  Q53EN6 UniProtKB/Swiss-Prot
  Q9BRL3 UniProtKB/Swiss-Prot
  Q9H8B0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-06-12 ATG13  autophagy related 13  ATG13  ATG13 autophagy related 13 homolog (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED
2011-07-27 ATG13  ATG13 autophagy related 13 homolog (S. cerevisiae)  KIAA0652  KIAA0652  Symbol and/or name change 5135510 APPROVED