TBC1D22A (TBC1 domain family member 22A) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: TBC1D22A (TBC1 domain family member 22A) Homo sapiens
Analyze
Symbol: TBC1D22A
Name: TBC1 domain family member 22A
RGD ID: 1602007
HGNC Page HGNC:1309
Description: Enables 14-3-3 protein binding activity and protein homodimerization activity. Predicted to be active in Golgi apparatus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C22orf4; HSC79E021; putative GTPase activator; TBC1 domain family, member 22A
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382246,762,650 - 47,175,699 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2246,762,617 - 47,175,699 (+)EnsemblGRCh38hg38GRCh38
GRCh372247,158,547 - 47,571,342 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362245,537,213 - 45,948,390 (+)NCBINCBI36Build 36hg18NCBI36
Celera2231,074,220 - 31,486,114 (+)NCBICelera
Cytogenetic Map22q13.31NCBI
HuRef2230,103,503 - 30,516,056 (+)NCBIHuRef
CHM1_12247,117,886 - 47,530,004 (+)NCBICHM1_1
T2T-CHM13v2.02247,250,621 - 47,665,617 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
TBC1D22AHumanintellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 
TBC1D22AHumanPhelan-McDermid syndrome  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Phelan-McDermid syndromeClinVar 

1 to 20 of 54 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
TBC1D22AHuman1,2-dimethylhydrazine decreases expressionISOTbc1d22a (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of TBC1D22A mRNACTDPMID:22206623
TBC1D22AHuman2,2',4,4'-Tetrabromodiphenyl ether increases expressionEXP 64804642 more ...CTDPMID:19095052
TBC1D22AHuman2,3,7,8-tetrachlorodibenzodioxine affects expressionISOTbc1d22a (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of TBC1D22A mRNACTDPMID:21570461
TBC1D22AHuman2,3,7,8-Tetrachlorodibenzofuran decreases expressionISOTbc1d22a (Rattus norvegicus)64804642 more ...CTDPMID:32109520
TBC1D22AHuman3,4-methylenedioxymethamphetamine increases expressionISOTbc1d22a (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of TBC1D22A mRNACTDPMID:20188158
TBC1D22AHumanaflatoxin B1 affects expressionEXP 6480464Aflatoxin B1 affects the expression of TBC1D22A proteinCTDPMID:20106945
TBC1D22AHumanaflatoxin B1 decreases methylationEXP 6480464Aflatoxin B1 results in decreased methylation of TBC1D22A polyA tailCTDPMID:30157460
TBC1D22AHumanaflatoxin B1 increases methylationEXP 6480464Aflatoxin B1 results in increased methylation of TBC1D22A intronCTDPMID:30157460
TBC1D22AHumanaflatoxin B1 decreases expressionEXP 6480464Aflatoxin B1 results in decreased expression of TBC1D22A mRNACTDPMID:21641981 and PMID:22100608
TBC1D22AHumanAflatoxin B2 alpha affects methylationEXP 6480464aflatoxin B2 affects the methylation of TBC1D22A intronCTDPMID:30157460
TBC1D22AHumanantirheumatic drug decreases expressionEXP 6480464Antirheumatic Agents results in decreased expression of TBC1D22A mRNACTDPMID:24449571
TBC1D22AHumanaristolochic acid A decreases expressionEXP 6480464aristolochic acid I results in decreased expression of TBC1D22A mRNACTDPMID:33212167
TBC1D22AHumanarsane affects methylationEXP 6480464Arsenic affects the methylation of TBC1D22A geneCTDPMID:25304211
TBC1D22AHumanarsenic atom affects methylationEXP 6480464Arsenic affects the methylation of TBC1D22A geneCTDPMID:25304211
TBC1D22AHumanatrazine affects methylationISOTbc1d22a (Rattus norvegicus)6480464Atrazine affects the methylation of TBC1D22A geneCTDPMID:28931070 and PMID:35440735
TBC1D22AHumanbenzo[a]pyrene decreases expressionISOTbc1d22a (Mus musculus)6480464Benzo(a)pyrene results in decreased expression of TBC1D22A mRNACTDPMID:19770486
TBC1D22AHumanbenzo[a]pyrene affects methylationEXP 6480464Benzo(a)pyrene affects the methylation of TBC1D22A intronCTDPMID:30157460
TBC1D22AHumanbenzo[a]pyrene decreases expressionEXP 6480464Benzo(a)pyrene results in decreased expression of TBC1D22A mRNACTDPMID:20064835 more ...
TBC1D22AHumanbenzo[a]pyrene diol epoxide I decreases expressionEXP 64804647 more ...CTDPMID:26238291
TBC1D22AHumanbenzo[e]pyrene affects methylationEXP 6480464benzo(e)pyrene affects the methylation of TBC1D22A intronCTDPMID:30157460

1 to 20 of 54 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
TBC1D22AHumanregulation of cilium assembly NOT|involved_inIMP 150520179 PMID:17646400UniProtPMID:17646400

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
TBC1D22AHumanGolgi apparatus is_active_inIBACGD:CAL0000181837 more ...150520179 GO_CentralGO_REF:0000033

Molecular Function

  

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
TBC1D22AHumanIntellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 

#
Reference Title
Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:10591208   PMID:12477932   PMID:12529303   PMID:14702039   PMID:15461802   PMID:15489334   PMID:16344560   PMID:17646400   PMID:18029348   PMID:18186464   PMID:19077034   PMID:20379614  
PMID:20834067   PMID:21873635   PMID:23526746   PMID:23572552   PMID:24255178   PMID:26186194   PMID:26496610   PMID:28514442   PMID:28611215   PMID:29568061   PMID:30021884   PMID:32814053  
PMID:33961781   PMID:34432599   PMID:34672954   PMID:35256949   PMID:35509820   PMID:36897256  



TBC1D22A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382246,762,650 - 47,175,699 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2246,762,617 - 47,175,699 (+)EnsemblGRCh38hg38GRCh38
GRCh372247,158,547 - 47,571,342 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362245,537,213 - 45,948,390 (+)NCBINCBI36Build 36hg18NCBI36
Celera2231,074,220 - 31,486,114 (+)NCBICelera
Cytogenetic Map22q13.31NCBI
HuRef2230,103,503 - 30,516,056 (+)NCBIHuRef
CHM1_12247,117,886 - 47,530,004 (+)NCBICHM1_1
T2T-CHM13v2.02247,250,621 - 47,665,617 (+)NCBIT2T-CHM13v2.0
Tbc1d22a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391586,095,502 - 86,382,704 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1586,098,660 - 86,382,704 (+)EnsemblGRCm39 Ensembl
GRCm381586,214,411 - 86,498,503 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1586,214,459 - 86,498,503 (+)EnsemblGRCm38mm10GRCm38
MGSCv371586,044,889 - 86,328,933 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361586,042,225 - 86,326,269 (+)NCBIMGSCv36mm8
Celera1588,356,819 - 88,637,955 (+)NCBICelera
Cytogenetic Map15E2NCBI
cM Map1540.56NCBI
Tbc1d22a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87119,172,284 - 119,457,271 (+)NCBIGRCr8
mRatBN7.27117,292,481 - 117,577,473 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7117,292,631 - 117,577,483 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7119,044,006 - 119,331,705 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07121,269,640 - 121,557,332 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07121,239,221 - 121,526,927 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07127,081,769 - 127,227,601 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7127,081,978 - 127,223,231 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07126,792,288 - 126,930,133 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.17124,240,095 - 124,527,412 (+)NCBI
Celera7113,582,538 - 114,076,520 (+)NCBICelera
Cytogenetic Map7q34NCBI
Tbc1d22a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541330,709,724 - 31,026,238 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541330,710,432 - 31,025,784 (+)NCBIChiLan1.0ChiLan1.0
TBC1D22A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22356,605,984 - 57,025,743 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12259,297,405 - 59,716,769 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02226,934,409 - 27,353,029 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12245,830,747 - 46,241,738 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2245,830,747 - 46,241,738 (+)Ensemblpanpan1.1panPan2
TBC1D22A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11019,196,866 - 19,532,103 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1019,070,467 - 19,532,062 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1019,119,926 - 19,454,053 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01019,933,410 - 20,267,704 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1019,933,339 - 20,267,651 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11019,651,625 - 19,985,731 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01019,964,022 - 20,298,045 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01020,145,684 - 20,479,843 (-)NCBIUU_Cfam_GSD_1.0
Tbc1d22a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049452,963,792 - 3,272,058 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366292,966,507 - 3,272,030 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366292,965,289 - 3,272,028 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TBC1D22A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl52,528,921 - 2,787,304 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.152,528,920 - 2,787,313 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.25126,533 - 312,712 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TBC1D22A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11929,260,995 - 29,681,768 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1929,261,018 - 29,684,409 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604595,780,108 - 96,253,332 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tbc1d22a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247522,903,130 - 3,273,535 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247522,816,547 - 3,272,693 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in TBC1D22A
55 total Variants

1 to 10 of 174 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 22q13.31(chr22:46183346-46791748)x3 copy number gain See cases [RCV000050316] Chr22:46183346..46791748 [GRCh38]
Chr22:46579243..47187645 [GRCh37]
Chr22:44957907..45566309 [NCBI36]
Chr22:22q13.31
uncertain significance
GRCh38/hg38 22q13.31-13.33(chr22:45239376-50739836)x1 copy number loss See cases [RCV000050935] Chr22:45239376..50739836 [GRCh38]
Chr22:45635257..51178264 [GRCh37]
Chr22:44013921..49525130 [NCBI36]
Chr22:22q13.31-13.33
pathogenic
GRCh38/hg38 22q13.31(chr22:47069266-47636658)x3 copy number gain See cases [RCV000050847] Chr22:47069266..47636658 [GRCh38]
Chr22:47465162..48032407 [GRCh37]
Chr22:45843826..46411071 [NCBI36]
Chr22:22q13.31
uncertain significance
GRCh38/hg38 22q13.2-13.33(chr22:42138114-50739836)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051370]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051370]|See cases [RCV000051370] Chr22:42138114..50739836 [GRCh38]
Chr22:42513525..51178264 [GRCh37]
Chr22:40843471..49525130 [NCBI36]
Chr22:22q13.2-13.33
pathogenic
GRCh38/hg38 22q13.2-13.33(chr22:42433752-50738932)x1 copy number loss See cases [RCV000051371] Chr22:42433752..50738932 [GRCh38]
Chr22:42829758..51177360 [GRCh37]
Chr22:41159702..49524226 [NCBI36]
Chr22:22q13.2-13.33
pathogenic
GRCh38/hg38 22q13.2-13.33(chr22:42826246-50739836)x1 copy number loss See cases [RCV000051407] Chr22:42826246..50739836 [GRCh38]
Chr22:43222252..51178264 [GRCh37]
Chr22:41552196..49525130 [NCBI36]
Chr22:22q13.2-13.33
pathogenic
GRCh38/hg38 22q13.31-13.33(chr22:43807366-50739836)x1 copy number loss See cases [RCV000051408] Chr22:43807366..50739836 [GRCh38]
Chr22:44203246..51178264 [GRCh37]
Chr22:42534579..49525130 [NCBI36]
Chr22:22q13.31-13.33
pathogenic
GRCh38/hg38 22q13.31-13.33(chr22:43993654-50739977)x1 copy number loss See cases [RCV000051409] Chr22:43993654..50739977 [GRCh38]
Chr22:44389534..51178405 [GRCh37]
Chr22:42720867..49525271 [NCBI36]
Chr22:22q13.31-13.33
pathogenic
GRCh38/hg38 22q13.31-13.33(chr22:44740175-50739836)x1 copy number loss See cases [RCV000051410] Chr22:44740175..50739836 [GRCh38]
Chr22:45136055..51178264 [GRCh37]
Chr22:43514719..49525130 [NCBI36]
Chr22:22q13.31-13.33
pathogenic
GRCh38/hg38 22q13.31-13.33(chr22:45648256-50739836)x1 copy number loss See cases [RCV000051411] Chr22:45648256..50739836 [GRCh38]
Chr22:46044136..51178264 [GRCh37]
Chr22:44422800..49525130 [NCBI36]
Chr22:22q13.31-13.33
pathogenic
1 to 10 of 174 rows

Predicted Target Of
Summary Value
Count of predictions:4790
Count of miRNA genes:1080
Interacting mature miRNAs:1344
Transcripts:ENST00000337137, ENST00000355704, ENST00000380995, ENST00000394449, ENST00000406733, ENST00000407381, ENST00000441162, ENST00000441936, ENST00000472791, ENST00000486163, ENST00000496139
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 36 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
407078531GWAS727507_HBMI-adjusted waist-hip ratio QTL GWAS727507 (human)1e-09body size trait (VT:0100005)224680215846802159Human
596965206GWAS1084725_Hdiet measurement, C-reactive protein measurement QTL GWAS1084725 (human)0.000006diet measurement, C-reactive protein measurement224705374547053746Human
597332510GWAS1428584_Hneuroimaging measurement QTL GWAS1428584 (human)0.0000009neuroimaging measurement224680062746800628Human
597161683GWAS1257757_Hlipid measurement QTL GWAS1257757 (human)0.0000002lipid measurementblood lipid measurement (CMO:0000050)224693618646936187Human
597162387GWAS1258461_Hlipid measurement QTL GWAS1258461 (human)0.0000003lipid measurementblood lipid measurement (CMO:0000050)224694831346948314Human
597025232GWAS1121306_Hpneumococcal meningitis QTL GWAS1121306 (human)0.0000006pneumococcal meningitis224711026447110265Human
597320604GWAS1416678_Heducational attainment QTL GWAS1416678 (human)6e-12educational attainment224680679446806795Human
597162577GWAS1258651_Hlipid measurement QTL GWAS1258651 (human)0.000002lipid measurementblood lipid measurement (CMO:0000050)224693618646936187Human
597331933GWAS1428007_Hcolorectal cancer QTL GWAS1428007 (human)0.0000006colorectal cancer224709510647095107Human
597038686GWAS1134760_Hgut microbiome measurement QTL GWAS1134760 (human)0.0000005gut microbiome measurement224706301447063015Human

1 to 10 of 36 rows
SGC31109  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,157,842 - 47,157,970UniSTSGRCh37
Build 362245,536,506 - 45,536,634RGDNCBI36
Celera2231,073,544 - 31,073,672RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,102,827 - 30,102,955UniSTS
GeneMap99-GB4 RH Map22154.64UniSTS
Whitehead-RH Map22180.0UniSTS
NCBI RH Map22232.0UniSTS
RH70665  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,308,121 - 47,308,248UniSTSGRCh37
Build 362245,686,785 - 45,686,912RGDNCBI36
Celera2231,223,011 - 31,223,138RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,252,884 - 30,253,011UniSTS
GeneMap99-GB4 RH Map22154.74UniSTS
NCBI RH Map22225.7UniSTS
D22S611  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,413,481 - 47,413,586UniSTSGRCh37
Build 362245,792,145 - 45,792,250RGDNCBI36
Celera2231,328,127 - 31,328,232RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,357,939 - 30,358,044UniSTS
Whitehead-YAC Contig Map22 UniSTS
RH91390  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,569,510 - 47,569,661UniSTSGRCh37
Build 362245,948,174 - 45,948,325RGDNCBI36
Celera2231,484,282 - 31,484,433RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,514,240 - 30,514,391UniSTS
GeneMap99-GB4 RH Map22156.61UniSTS
G49298  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,298,722 - 47,299,082UniSTSGRCh37
Build 362245,677,386 - 45,677,746RGDNCBI36
Celera2231,213,608 - 31,213,968RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,243,556 - 30,243,916UniSTS
G49320  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,438,261 - 47,438,562UniSTSGRCh37
Build 362245,816,925 - 45,817,226RGDNCBI36
Celera2231,352,934 - 31,353,235RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,382,530 - 30,382,831UniSTS
G49328  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,343,024 - 47,343,384UniSTSGRCh37
Build 362245,721,688 - 45,722,048RGDNCBI36
Celera2231,257,627 - 31,257,987RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,287,506 - 30,287,866UniSTS
G49329  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,345,453 - 47,345,820UniSTSGRCh37
Build 362245,724,117 - 45,724,484RGDNCBI36
Celera2231,260,057 - 31,260,424RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,289,936 - 30,290,303UniSTS
G49330  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,358,247 - 47,358,624UniSTSGRCh37
Build 362245,736,911 - 45,737,288RGDNCBI36
Celera2231,272,891 - 31,273,268RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,302,767 - 30,303,144UniSTS
G49331  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,367,689 - 47,367,941UniSTSGRCh37
Build 362245,746,353 - 45,746,605RGDNCBI36
Celera2231,282,333 - 31,282,585RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,312,208 - 30,312,460UniSTS
G49332  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,369,788 - 47,370,155UniSTSGRCh37
Build 362245,748,452 - 45,748,819RGDNCBI36
Celera2231,284,432 - 31,284,799RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,314,307 - 30,314,674UniSTS
G49333  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,370,095 - 47,370,446UniSTSGRCh37
Build 362245,748,759 - 45,749,110RGDNCBI36
Celera2231,284,739 - 31,285,090RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,314,614 - 30,314,965UniSTS
G49334  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,370,949 - 47,371,333UniSTSGRCh37
Build 362245,749,613 - 45,749,997RGDNCBI36
Celera2231,285,593 - 31,285,977RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,315,468 - 30,315,852UniSTS
G49335  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,372,098 - 47,372,412UniSTSGRCh37
Build 362245,750,762 - 45,751,076RGDNCBI36
Celera2231,286,742 - 31,287,056RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,316,617 - 30,316,931UniSTS
G49336  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,380,299 - 47,380,567UniSTSGRCh37
Build 362245,758,963 - 45,759,231RGDNCBI36
Celera2231,294,942 - 31,295,210RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,324,815 - 30,325,083UniSTS
G49337  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,380,541 - 47,380,891UniSTSGRCh37
Build 362245,759,205 - 45,759,555RGDNCBI36
Celera2231,295,184 - 31,295,534RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,325,057 - 30,325,407UniSTS
G49338  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,388,484 - 47,388,873UniSTSGRCh37
Build 362245,767,148 - 45,767,537RGDNCBI36
Celera2231,303,129 - 31,303,520RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,332,999 - 30,333,390UniSTS
G49349  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,440,059 - 47,440,437UniSTSGRCh37
Build 362245,818,723 - 45,819,101RGDNCBI36
Celera2231,354,732 - 31,355,110RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,384,360 - 30,384,738UniSTS
G49350  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,440,397 - 47,440,751UniSTSGRCh37
Build 362245,819,061 - 45,819,415RGDNCBI36
Celera2231,355,070 - 31,355,423RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,384,698 - 30,385,052UniSTS
G49351  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,440,834 - 47,441,186UniSTSGRCh37
Build 362245,819,498 - 45,819,850RGDNCBI36
Celera2231,355,506 - 31,355,858RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,385,135 - 30,385,487UniSTS
G49352  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,440,861 - 47,441,231UniSTSGRCh37
Build 362245,819,525 - 45,819,895RGDNCBI36
Celera2231,355,533 - 31,355,903RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,385,162 - 30,385,532UniSTS
G49353  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,440,926 - 47,441,284UniSTSGRCh37
Build 362245,819,590 - 45,819,948RGDNCBI36
Celera2231,355,598 - 31,355,956RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,385,227 - 30,385,585UniSTS
G49354  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,441,294 - 47,441,648UniSTSGRCh37
Build 362245,819,958 - 45,820,312RGDNCBI36
Celera2231,355,966 - 31,356,320RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,385,595 - 30,385,949UniSTS
G49355  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,441,399 - 47,441,752UniSTSGRCh37
Build 362245,820,063 - 45,820,416RGDNCBI36
Celera2231,356,071 - 31,356,424RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,385,700 - 30,386,053UniSTS
G49356  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,441,654 - 47,442,040UniSTSGRCh37
Build 362245,820,318 - 45,820,704RGDNCBI36
Celera2231,356,326 - 31,356,712RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,385,955 - 30,386,341UniSTS
G49357  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,442,325 - 47,442,677UniSTSGRCh37
Build 362245,820,989 - 45,821,341RGDNCBI36
Celera2231,356,997 - 31,357,349RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,386,626 - 30,386,978UniSTS
G49358  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,443,365 - 47,443,737UniSTSGRCh37
Build 362245,822,029 - 45,822,401RGDNCBI36
Celera2231,358,037 - 31,358,409RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,387,666 - 30,388,038UniSTS
G49359  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,444,423 - 47,444,798UniSTSGRCh37
Build 362245,823,087 - 45,823,462RGDNCBI36
Celera2231,359,095 - 31,359,470RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,388,724 - 30,389,099UniSTS
G49360  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,444,587 - 47,444,938UniSTSGRCh37
Build 362245,823,251 - 45,823,602RGDNCBI36
Celera2231,359,259 - 31,359,610RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,388,888 - 30,389,239UniSTS
G49361  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,448,819 - 47,449,186UniSTSGRCh37
Build 362245,827,483 - 45,827,850RGDNCBI36
Celera2231,363,491 - 31,363,858RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,393,120 - 30,393,487UniSTS
G49362  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,458,569 - 47,458,936UniSTSGRCh37
Build 362245,837,233 - 45,837,600RGDNCBI36
Celera2231,373,241 - 31,373,608RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,402,870 - 30,403,237UniSTS
G49363  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,458,756 - 47,459,135UniSTSGRCh37
Build 362245,837,420 - 45,837,799RGDNCBI36
Celera2231,373,428 - 31,373,807RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,403,057 - 30,403,436UniSTS
G49364  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,459,200 - 47,459,558UniSTSGRCh37
Build 362245,837,864 - 45,838,222RGDNCBI36
Celera2231,373,872 - 31,374,230RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,403,501 - 30,403,859UniSTS
G49365  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,460,266 - 47,460,641UniSTSGRCh37
Build 362245,838,930 - 45,839,305RGDNCBI36
Celera2231,374,938 - 31,375,313RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,404,568 - 30,404,943UniSTS
G49366  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,460,438 - 47,460,689UniSTSGRCh37
Build 362245,839,102 - 45,839,353RGDNCBI36
Celera2231,375,110 - 31,375,361RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,404,740 - 30,404,991UniSTS
G49368  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,426,545 - 47,426,914UniSTSGRCh37
Build 362245,805,209 - 45,805,578RGDNCBI36
Celera2231,341,216 - 31,341,585RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,370,814 - 30,371,183UniSTS
G49369  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,430,037 - 47,430,387UniSTSGRCh37
Build 362245,808,701 - 45,809,051RGDNCBI36
Celera2231,344,708 - 31,345,060RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,374,304 - 30,374,656UniSTS
G49426  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,274,975 - 47,275,338UniSTSGRCh37
Build 362245,653,639 - 45,654,002RGDNCBI36
Celera2231,189,862 - 31,190,224RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,219,825 - 30,220,186UniSTS
D22S22  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,491,664 - 47,492,007UniSTSGRCh37
Build 362245,870,328 - 45,870,671RGDNCBI36
Celera2231,406,435 - 31,406,778RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,435,512 - 30,435,855UniSTS
D22S558  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,412,959 - 47,413,063UniSTSGRCh37
Build 362245,791,623 - 45,791,727RGDNCBI36
Celera2231,327,605 - 31,327,709RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,357,417 - 30,357,521UniSTS
G65365  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,388,461 - 47,388,811UniSTSGRCh37
Build 362245,767,125 - 45,767,475RGDNCBI36
Celera2231,303,106 - 31,303,458RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,332,976 - 30,333,328UniSTS
G65731  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,372,098 - 47,372,457UniSTSGRCh37
Build 362245,750,762 - 45,751,121RGDNCBI36
Celera2231,286,742 - 31,287,101RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,316,617 - 30,316,976UniSTS
SHGC-105075  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,327,631 - 47,327,918UniSTSGRCh37
Build 362245,706,295 - 45,706,582RGDNCBI36
Celera2231,242,518 - 31,242,805RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,272,397 - 30,272,684UniSTS
TNG Radiation Hybrid Map2211686.0UniSTS
SHGC-105969  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,219,143 - 47,219,455UniSTSGRCh37
Build 362245,597,807 - 45,598,119RGDNCBI36
Celera2231,134,594 - 31,134,906RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,163,894 - 30,164,206UniSTS
TNG Radiation Hybrid Map2211714.0UniSTS
SHGC-107488  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,254,425 - 47,254,745UniSTSGRCh37
Build 362245,633,089 - 45,633,409RGDNCBI36
Celera2231,169,875 - 31,170,195RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,199,531 - 30,199,851UniSTS
TNG Radiation Hybrid Map2211707.0UniSTS
A009K40  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,369,499 - 47,369,649UniSTSGRCh37
Build 362245,748,163 - 45,748,313RGDNCBI36
Celera2231,284,143 - 31,284,293RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,314,018 - 30,314,168UniSTS
GeneMap99-GB4 RH Map22154.74UniSTS
NCBI RH Map22223.5UniSTS
AL008663  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,422,208 - 47,422,387UniSTSGRCh37
Build 362245,800,872 - 45,801,051RGDNCBI36
Celera2231,336,879 - 31,337,058RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,366,648 - 30,366,827UniSTS
RH66495  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,309,416 - 47,309,519UniSTSGRCh37
Build 362245,688,080 - 45,688,183RGDNCBI36
Celera2231,224,306 - 31,224,409RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,254,179 - 30,254,282UniSTS
GeneMap99-GB4 RH Map22173.6UniSTS
D22S1592  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,311,091 - 47,311,388UniSTSGRCh37
Build 362245,689,755 - 45,690,052RGDNCBI36
Celera2231,225,980 - 31,226,277RGD
Cytogenetic Map22q13.31UniSTS
HuRef2230,255,853 - 30,256,150UniSTS
D22S1593  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,491,658 - 47,492,005UniSTSGRCh37
Build 362245,870,322 - 45,870,669RGDNCBI36
Celera2231,406,429 - 31,406,776RGD
HuRef2230,435,506 - 30,435,853UniSTS
D22S1599  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,313,915 - 47,314,177UniSTSGRCh37
Build 362245,692,579 - 45,692,841RGDNCBI36
Celera2231,228,804 - 31,229,066RGD
Cytogenetic Map22q13.31UniSTS
HuRef2230,258,677 - 30,258,939UniSTS
D22S295  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,302,618 - 47,302,888UniSTSGRCh37
Build 362245,681,282 - 45,681,552RGDNCBI36
Celera2231,217,508 - 31,217,778RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,247,456 - 30,247,726UniSTS
Whitehead-YAC Contig Map22 UniSTS
AL008673  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,284,494 - 47,284,632UniSTSGRCh37
Build 362245,663,158 - 45,663,296RGDNCBI36
Celera2231,199,379 - 31,199,517RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,229,325 - 30,229,463UniSTS
AL023601  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,229,107 - 47,229,296UniSTSGRCh37
Build 362245,607,771 - 45,607,960RGDNCBI36
Celera2231,144,558 - 31,144,747RGD
Cytogenetic Map22q13.3UniSTS
HuRef2230,173,858 - 30,174,047UniSTS
G32626  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372247,369,499 - 47,369,649UniSTSGRCh37
Celera2231,284,143 - 31,284,293UniSTS
Cytogenetic Map22q13.3UniSTS
HuRef2230,314,018 - 30,314,168UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1


1 to 30 of 79 rows
RefSeq Transcripts NM_001284303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001284304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001284305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410803 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_014346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_104292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005261496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011530099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011530100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011530101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011530102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017028742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017028743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017028744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017028746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017028747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024452198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047441306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047441307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047441308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047441309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054325473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 79 rows

Ensembl Acc Id: ENST00000337137   ⟹   ENSP00000336724
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2246,762,650 - 47,175,693 (+)Ensembl
Ensembl Acc Id: ENST00000355704   ⟹   ENSP00000347932
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2246,762,681 - 47,174,086 (+)Ensembl
Ensembl Acc Id: ENST00000380995   ⟹   ENSP00000370383
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2246,762,617 - 47,175,699 (+)Ensembl
Ensembl Acc Id: ENST00000394449   ⟹   ENSP00000377964
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2246,762,683 - 47,174,087 (+)Ensembl
Ensembl Acc Id: ENST00000406733   ⟹   ENSP00000385634
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2246,773,927 - 47,174,092 (+)Ensembl
Ensembl Acc Id: ENST00000407381   ⟹   ENSP00000384036
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2246,762,672 - 47,174,083 (+)Ensembl
Ensembl Acc Id: ENST00000441162   ⟹   ENSP00000406214
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2246,763,742 - 47,174,092 (+)Ensembl
Ensembl Acc Id: ENST00000441936   ⟹   ENSP00000398828
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2246,762,651 - 46,793,675 (+)Ensembl
Ensembl Acc Id: ENST00000472791
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2246,763,266 - 46,793,775 (+)Ensembl
Ensembl Acc Id: ENST00000486163
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2246,762,659 - 46,793,671 (+)Ensembl
Ensembl Acc Id: ENST00000496139
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2246,762,687 - 46,793,616 (+)Ensembl
RefSeq Acc Id: NM_001284303   ⟹   NP_001271232
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 47,175,693 (+)NCBI
HuRef2230,103,499 - 30,516,056 (+)NCBI
CHM1_12247,117,882 - 47,530,004 (+)NCBI
T2T-CHM13v2.02247,250,621 - 47,665,611 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001284304   ⟹   NP_001271233
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 47,175,693 (+)NCBI
HuRef2230,103,499 - 30,516,056 (+)NCBI
CHM1_12247,117,882 - 47,530,004 (+)NCBI
T2T-CHM13v2.02247,250,621 - 47,665,611 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001284305   ⟹   NP_001271234
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,774,098 - 47,175,693 (+)NCBI
HuRef2230,103,499 - 30,516,056 (+)NCBI
CHM1_12247,129,205 - 47,530,004 (+)NCBI
T2T-CHM13v2.02247,262,490 - 47,665,611 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001410803   ⟹   NP_001397732
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 47,175,693 (+)NCBI
T2T-CHM13v2.02247,250,621 - 47,665,611 (+)NCBI
RefSeq Acc Id: NM_014346   ⟹   NP_055161
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 47,175,693 (+)NCBI
GRCh372247,158,514 - 47,571,342 (+)NCBI
Build 362245,537,213 - 45,948,390 (+)NCBI Archive
Celera2231,074,220 - 31,486,114 (+)RGD
HuRef2230,103,499 - 30,516,056 (+)NCBI
CHM1_12247,117,882 - 47,530,004 (+)NCBI
T2T-CHM13v2.02247,250,621 - 47,665,611 (+)NCBI
Sequence:
RefSeq Acc Id: NR_104292
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,763,742 - 47,175,699 (+)NCBI
HuRef2230,103,499 - 30,516,056 (+)NCBI
CHM1_12247,119,002 - 47,530,004 (+)NCBI
T2T-CHM13v2.02247,251,709 - 47,665,617 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011530100   ⟹   XP_011528402
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 47,111,603 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011530101   ⟹   XP_011528403
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 46,976,200 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011530102   ⟹   XP_011528404
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 47,111,597 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017028742   ⟹   XP_016884231
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 47,175,693 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017028743   ⟹   XP_016884232
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 47,118,314 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017028746   ⟹   XP_016884235
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 46,989,072 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017028747   ⟹   XP_016884236
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 46,932,012 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047441306   ⟹   XP_047297262
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 47,118,314 (+)NCBI
RefSeq Acc Id: XM_047441307   ⟹   XP_047297263
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 47,111,597 (+)NCBI
RefSeq Acc Id: XM_047441308   ⟹   XP_047297264
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 47,037,114 (+)NCBI
RefSeq Acc Id: XM_047441309   ⟹   XP_047297265
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 47,037,114 (+)NCBI
RefSeq Acc Id: XM_054325465   ⟹   XP_054181440
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02247,250,621 - 47,603,161 (+)NCBI
RefSeq Acc Id: XM_054325466   ⟹   XP_054181441
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02247,250,621 - 47,665,611 (+)NCBI
RefSeq Acc Id: XM_054325467   ⟹   XP_054181442
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02247,250,621 - 47,603,155 (+)NCBI
RefSeq Acc Id: XM_054325468   ⟹   XP_054181443
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02247,250,621 - 47,600,879 (+)NCBI
RefSeq Acc Id: XM_054325469   ⟹   XP_054181444
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02247,250,621 - 47,600,885 (+)NCBI
RefSeq Acc Id: XM_054325470   ⟹   XP_054181445
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02247,250,621 - 47,478,355 (+)NCBI
RefSeq Acc Id: XM_054325471   ⟹   XP_054181446
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02247,250,621 - 47,467,810 (+)NCBI
RefSeq Acc Id: XM_054325472   ⟹   XP_054181447
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02247,250,621 - 47,403,041 (+)NCBI
RefSeq Acc Id: XM_054325473   ⟹   XP_054181448
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02247,250,621 - 47,427,124 (+)NCBI
RefSeq Acc Id: XM_054325474   ⟹   XP_054181449
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02247,250,621 - 47,526,399 (+)NCBI
RefSeq Acc Id: XM_054325475   ⟹   XP_054181450
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02247,250,621 - 47,600,879 (+)NCBI
RefSeq Acc Id: XM_054325476   ⟹   XP_054181451
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02247,250,621 - 47,526,399 (+)NCBI
RefSeq Acc Id: XR_007067970
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 46,927,366 (+)NCBI
RefSeq Acc Id: XR_007067971
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,650 - 46,932,012 (+)NCBI
RefSeq Acc Id: XR_008485383
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02247,250,621 - 47,427,079 (+)NCBI
1 to 30 of 54 rows
Protein RefSeqs NP_001271232 (Get FASTA)   NCBI Sequence Viewer  
  NP_001271233 (Get FASTA)   NCBI Sequence Viewer  
  NP_001271234 (Get FASTA)   NCBI Sequence Viewer  
  NP_001397732 (Get FASTA)   NCBI Sequence Viewer  
  NP_055161 (Get FASTA)   NCBI Sequence Viewer  
  XP_011528402 (Get FASTA)   NCBI Sequence Viewer  
  XP_011528403 (Get FASTA)   NCBI Sequence Viewer  
  XP_011528404 (Get FASTA)   NCBI Sequence Viewer  
  XP_016884231 (Get FASTA)   NCBI Sequence Viewer  
  XP_016884232 (Get FASTA)   NCBI Sequence Viewer  
  XP_016884235 (Get FASTA)   NCBI Sequence Viewer  
  XP_016884236 (Get FASTA)   NCBI Sequence Viewer  
  XP_047297262 (Get FASTA)   NCBI Sequence Viewer  
  XP_047297263 (Get FASTA)   NCBI Sequence Viewer  
  XP_047297264 (Get FASTA)   NCBI Sequence Viewer  
  XP_047297265 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181440 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181441 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181442 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181443 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181444 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181445 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181446 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181447 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181448 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181449 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181450 (Get FASTA)   NCBI Sequence Viewer  
  XP_054181451 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD12228 (Get FASTA)   NCBI Sequence Viewer  
  AAH01292 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 54 rows
1 to 5 of 36 rows
1 to 5 of 36 rows
RefSeq Acc Id: NP_055161   ⟸   NM_014346
- Peptide Label: isoform a
- UniProtKB: Q9UH25 (UniProtKB/Swiss-Prot),   Q9UGU6 (UniProtKB/Swiss-Prot),   Q9UGT2 (UniProtKB/Swiss-Prot),   Q9UGG0 (UniProtKB/Swiss-Prot),   Q9BVD6 (UniProtKB/Swiss-Prot),   Q92680 (UniProtKB/Swiss-Prot),   Q6ZUH2 (UniProtKB/Swiss-Prot),   Q5TE47 (UniProtKB/Swiss-Prot),   B9A6M3 (UniProtKB/Swiss-Prot),   B0QYI3 (UniProtKB/Swiss-Prot),   B0QYI2 (UniProtKB/Swiss-Prot),   Q9Y4W5 (UniProtKB/Swiss-Prot),   Q8WUA7 (UniProtKB/Swiss-Prot),   B2RE30 (UniProtKB/TrEMBL),   B3KP29 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001271233   ⟸   NM_001284304
- Peptide Label: isoform c
- UniProtKB: A0A0A0MRY0 (UniProtKB/TrEMBL),   B2RE30 (UniProtKB/TrEMBL),   B3KP29 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001271232   ⟸   NM_001284303
- Peptide Label: isoform b
- UniProtKB: B3KP29 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001271234   ⟸   NM_001284305
- Peptide Label: isoform d
- UniProtKB: B2RE30 (UniProtKB/TrEMBL),   B3KP29 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011528402   ⟸   XM_011530100
- Peptide Label: isoform X5
- Sequence:
Rab-GAP TBC

Name Modeler Protein Id AA Range Protein Structure
AF-Q8WUA7-F1-model_v2 AlphaFold Q8WUA7 1-517 view protein structure

RGD ID:6799850
Promoter ID:HG_KWN:43279
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000355704,   ENST00000380995,   OTTHUMT00000317600,   OTTHUMT00000317928,   OTTHUMT00000317930,   OTTHUMT00000317931,   OTTHUMT00000317932,   OTTHUMT00000317933,   UC003BIC.1,   UC003BID.1,   UC010HAF.1
Position:
Human AssemblyChrPosition (strand)Source
Build 362245,536,936 - 45,537,807 (+)MPROMDB
RGD ID:6812181
Promoter ID:HG_ACW:52490
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:BYTOR.AAPR07-UNSPLICED,   TBC1D22A.FAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 362245,543,851 - 45,544,351 (+)MPROMDB
RGD ID:6800403
Promoter ID:HG_KWN:43280
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   K562,   Lymphoblastoid
Transcripts:ENST00000406733
Position:
Human AssemblyChrPosition (strand)Source
Build 362245,547,746 - 45,548,927 (+)MPROMDB
RGD ID:13604476
Promoter ID:EPDNEW_H28422
Type:initiation region
Name:TBC1D22A_1
Description:TBC1 domain family member 22A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H28414  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382246,762,660 - 46,762,720EPDNEW


1 to 40 of 60 rows
Database
Acc Id
Source(s)
COSMIC TBC1D22A COSMIC
Ensembl Genes ENSG00000054611 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000337137 ENTREZGENE
  ENST00000337137.9 UniProtKB/Swiss-Prot
  ENST00000355704 ENTREZGENE
  ENST00000355704.7 UniProtKB/Swiss-Prot
  ENST00000380995 ENTREZGENE
  ENST00000406733 ENTREZGENE
  ENST00000406733.1 UniProtKB/Swiss-Prot
  ENST00000407381 ENTREZGENE
  ENST00000441162.5 UniProtKB/Swiss-Prot
Gene3D-CATH putative rabgap domain of human tbc1 domain family member 14 like domains UniProtKB/Swiss-Prot
  Ypt/Rab-GAP domain of gyp1p, domain 3 UniProtKB/Swiss-Prot
GTEx ENSG00000054611 GTEx
HGNC ID HGNC:1309 ENTREZGENE
Human Proteome Map TBC1D22A Human Proteome Map
InterPro Rab-GTPase-TBC_dom UniProtKB/Swiss-Prot
  Rab-GTPase_TBC_sf UniProtKB/Swiss-Prot
KEGG Report hsa:25771 UniProtKB/Swiss-Prot
NCBI Gene 25771 ENTREZGENE
OMIM 616879 OMIM
PANTHER TBC1 DOMAIN FAMILY MEMBER 22A UniProtKB/Swiss-Prot
  TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN UniProtKB/Swiss-Prot
Pfam RabGAP-TBC UniProtKB/Swiss-Prot
PharmGKB PA25888 PharmGKB
PROSITE TBC_RABGAP UniProtKB/Swiss-Prot
SMART TBC UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47923 UniProtKB/Swiss-Prot
UniProt A0A0A0MRY0 ENTREZGENE, UniProtKB/TrEMBL
  B0QYI1 ENTREZGENE, UniProtKB/TrEMBL
  B0QYI2 ENTREZGENE
  B0QYI3 ENTREZGENE
  B2RE30 ENTREZGENE, UniProtKB/TrEMBL
  B3KP29 ENTREZGENE, UniProtKB/TrEMBL
  B9A6M3 ENTREZGENE
  F8WBF7_HUMAN UniProtKB/TrEMBL
  F8WDP1_HUMAN UniProtKB/TrEMBL
  Q5TE47 ENTREZGENE
  Q6ZUH2 ENTREZGENE
  Q8WUA7 ENTREZGENE
1 to 40 of 60 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-24 TBC1D22A  TBC1 domain family member 22A    TBC1 domain family, member 22A  Symbol and/or name change 5135510 APPROVED