Gmppb (GDP-mannose pyrophosphorylase B)

Gene: Gmppb (GDP-mannose pyrophosphorylase B) Rattus norvegicus

Analyze

Symbol:

Gmppb

Name:

GDP-mannose pyrophosphorylase B

RGD ID:

1560458

Description:

Predicted to enable mannose-1-phosphate guanylyltransferase (GTP) activity. Predicted to be involved in GDP-mannose biosynthetic process and protein glycosylation. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in autosomal recessive limb-girdle muscular dystrophy type 2T; congenital muscular dystrophy-dystroglycanopathy A14; muscular dystrophy-dystroglycanopathy; and muscular dystrophy-dystroglycanopathy type B14. Orthologous to human GMPPB (GDP-mannose pyrophosphorylase B); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC363145; mannose-1-phosphate guanyltransferase beta; RGD1560458; similar to GDP-mannose pyrophosphorylase B

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GMPPB (GDP-mannose pyrophosphorylase B)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Gmppb (GDP-mannose pyrophosphorylase B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Gmppb (GDP-mannose pyrophosphorylase B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GMPPB (GDP-mannose pyrophosphorylase B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GMPPB (GDP-mannose pyrophosphorylase B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Gmppb (GDP-mannose pyrophosphorylase B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GMPPB (GDP-mannose pyrophosphorylase B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GMPPB (GDP-mannose pyrophosphorylase B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Gmppb (GDP-mannose pyrophosphorylase B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	GMPPB (GDP-mannose pyrophosphorylase B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Gmppb (GDP-mannose pyrophosphorylase B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	gmppb (GDP-mannose pyrophosphorylase B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG1129	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PSA1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	tag-335	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	gmppb	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	117,616,029 - 117,622,866 (+)	NCBI		GRCr8
mRatBN7.2	8	108,737,429 - 108,740,437 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	108,693,060 - 108,767,286 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	114,364,088 - 114,366,720 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	112,563,412 - 112,566,044 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	110,406,052 - 110,408,684 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	116,826,251 - 116,856,159 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	116,826,680 - 116,856,159 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	116,180,562 - 116,210,240 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	113,317,165 - 113,346,646 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	8	108,042,518 - 108,071,499 (+)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Aicardi-Goutieres Syndrome 1 (ISO)

autosomal recessive limb-girdle muscular dystrophy type 2T (ISO)

congenital muscular dystrophy-dystroglycanopathy A14 (ISO)

developmental and epileptic encephalopathy (ISO)

Developmental Disabilities (ISO)

early infantile epileptic encephalopathy (ISO)

genetic disease (ISO)

isolated elevated serum creatine phosphokinase levels (ISO)

muscular dystrophy (ISO)

muscular dystrophy-dystroglycanopathy (ISO)

muscular dystrophy-dystroglycanopathy type B14 (ISO)

Walker-Warburg syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(2,4,5-trichlorophenoxy)acetic acid (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,6-tribromophenol (ISO)

2,4,6-trinitrotoluene (EXP)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

2-methylcholine (ISO)

2-palmitoylglycerol (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

aldrin (ISO)

amitrole (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

carbon nanotube (ISO)

chloroethene (ISO)

ciguatoxin CTX1B (ISO)

clofibrate (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

diazinon (ISO)

endosulfan (EXP)

folic acid (ISO)

formaldehyde (ISO)

gentamycin (EXP)

glafenine (EXP)

indometacin (ISO)

ivermectin (ISO)

mercury atom (ISO)

mercury(0) (ISO)

metformin (EXP)

methidathion (ISO)

methimazole (EXP)

nickel atom (ISO)

paracetamol (ISO)

phenobarbital (EXP)

pirinixic acid (ISO)

poly(I:C) (EXP)

propiconazole (ISO)

quercetin (ISO)

resveratrol (EXP)

silicon dioxide (ISO)

sodium fluoride (ISO)

sulfadimethoxine (EXP)

testosterone (ISO)

Testosterone propionate (ISO)

tetrachloroethene (ISO)

tetrachloromethane (EXP,ISO)

tetrahydropalmatine (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triphenyl phosphate (EXP)

tunicamycin (ISO)

valproic acid (ISO)

vincristine (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

GDP-mannose biosynthetic process (IBA,ISO)

protein glycosylation (IBA)

Cellular Component

cytoplasm (IBA,ISO)

Molecular Function

GTP binding (IEA)

mannose-1-phosphate guanylyltransferase (GTP) activity (IBA,ISO)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

amino sugar metabolic pathway (IEA)

fructose and mannose metabolic pathway (IEA,ISO)

fructosuria pathway (ISO)

hereditary fructose intolerance syndrome pathway (ISO)

nucleotide sugar metabolic pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GMPPB-Associated Dystroglycanopathy: Emerging Common Variants with Phenotype Correlation.	Jensen BS, etal., Hum Mutat. 2015 Dec;36(12):1159-63. doi: 10.1002/humu.22898. Epub 2015 Sep 23.
3.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
4.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
5.	SMPDB Annotation Import Pipeline	Pipeline to import SMPDB annotations from SMPDB into RGD
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:11082198	PMID:18614015	PMID:23376485	PMID:23768512

Genomics

Comparative Map Data

Gmppb
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	117,616,029 - 117,622,866 (+)	NCBI		GRCr8
mRatBN7.2	8	108,737,429 - 108,740,437 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	108,693,060 - 108,767,286 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	114,364,088 - 114,366,720 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	112,563,412 - 112,566,044 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	110,406,052 - 110,408,684 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	116,826,251 - 116,856,159 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	116,826,680 - 116,856,159 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	116,180,562 - 116,210,240 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	113,317,165 - 113,346,646 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	8	108,042,518 - 108,071,499 (+)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

GMPPB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	49,719,916 - 49,723,951 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	49,716,844 - 49,723,973 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	49,757,349 - 49,761,384 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	49,733,936 - 49,736,388 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	49,723,623 - 49,726,075 (-)	NCBI		Celera
Cytogenetic Map	3	p21.31	NCBI
HuRef	3	49,817,885 - 49,820,383 (-)	NCBI		HuRef
CHM1_1	3	49,710,967 - 49,713,465 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	49,749,202 - 49,753,237 (-)	NCBI		T2T-CHM13v2.0

Gmppb
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	107,926,490 - 107,929,119 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	107,926,441 - 107,930,000 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	108,049,239 - 108,051,923 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	108,049,242 - 108,052,801 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	107,951,621 - 107,954,267 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	107,907,410 - 107,909,802 (+)	NCBI		MGSCv36	mm8
Celera	9	107,659,146 - 107,661,786 (+)	NCBI		Celera
Cytogenetic Map	9	F1	NCBI
cM Map	9	59.07	NCBI

Gmppb
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955532	1,622,605 - 1,624,900 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955532	1,622,605 - 1,624,900 (-)	NCBI	ChiLan1.0	ChiLan1.0

GMPPB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	49,708,098 - 49,710,630 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	49,712,872 - 49,715,115 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	49,653,638 - 49,656,135 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	50,889,479 - 50,891,969 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	50,889,479 - 50,891,969 (-)	Ensembl	panpan1.1		panPan2

GMPPB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	39,550,799 - 39,553,045 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	39,550,799 - 39,553,045 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	39,471,723 - 39,473,969 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	39,908,319 - 39,910,564 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	39,908,072 - 39,911,799 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	39,275,391 - 39,277,636 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	39,678,760 - 39,681,006 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	39,958,590 - 39,960,836 (+)	NCBI		UU_Cfam_GSD_1.0

Gmppb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	64,574,309 - 64,577,997 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936529	1,336,002 - 1,338,400 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936529	1,336,002 - 1,338,615 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GMPPB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	32,246,466 - 32,249,619 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1 Ensembl	13	32,248,268 - 32,253,155 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	32,246,471 - 32,253,162 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	35,425,664 - 35,432,367 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GMPPB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	11,116,497 - 11,118,980 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	11,116,752 - 11,118,926 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	155,881,479 - 155,885,552 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gmppb
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	3,645,768 - 3,648,165 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	3,645,768 - 3,648,157 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Gmppb
9 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	114
Count of miRNA genes:	82
Interacting mature miRNAs:	99
Transcripts:	ENSRNOT00000026854
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1581557	Eae16	Experimental allergic encephalomyelitis QTL 16	3.8		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	8	8462195	110921472	Rat
631650	Stl6	Serum triglyceride level QTL 6	4	0.0019	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	10378157	112202585	Rat
1554321	Bmd3	Bone mineral density QTL 3	7.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	40952565	123900184	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	46531639	119088626	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	8	46531639	119088626	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	absolute change in systolic blood pressure (CMO:0000607)	8	46531639	119088626	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	46531639	119088626	Rat
2303171	Bp331	Blood pressure QTL 331	5.57	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	61290298	119084929	Rat
631653	Bp125	Blood pressure QTL 125	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	66142385	111142385	Rat
631210	Bw3	Body weight QTL3	5.9		mesenteric fat pad mass (VT:0010427)	mesenteric fat pad weight to body weight ratio (CMO:0000654)	8	69349194	112783834	Rat
1300171	Bp184	Blood pressure QTL 184	3.66		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	8	70513503	118219066	Rat
8694446	Bw170	Body weight QTL 170	12.07	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	8	71888757	116888757	Rat
9590292	Uminl3	Urine mineral level QTL 3	3.62	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	8	71888757	116888757	Rat
8694200	Abfw4	Abdominal fat weight QTL 4	9.07	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	8	71888757	116888757	Rat
8694392	Bw161	Body weight QTL 161	8.06	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	8	71888757	116888757	Rat
1549909	Stresp11	Stress response QTL 11	6.83	0.0019	stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	8	73473045	118473045	Rat
2300181	Bmd55	Bone mineral density QTL 55	5.7	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	76468691	121468691	Rat
61437	Cia6	Collagen induced arthritis QTL 6			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	82460758	122812818	Rat
2313400	Anxrr25	Anxiety related response QTL 25			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	8	89265192	114019816	Rat
738011	Anxrr9	Anxiety related response QTL 9	6.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	8	93535351	123900184	Rat
1358893	Bp263	Blood pressure QTL 263	5.01		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	93965141	123900184	Rat
1358903	Bp252	Blood pressure QTL 252	7	0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	93965141	123900184	Rat
738014	Anxrr15	Anxiety related response QTL 15	3.6	0.005	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	8	95718998	123900184	Rat
2300182	Bmd56	Bone mineral density QTL 56	5.4		femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	95718998	123900184	Rat
724539	Cm19	Cardiac mass QTL 19	2.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	8	100149864	120994388	Rat
631217	Activ1	Activity QTL 1	15.9		voluntary movement trait (VT:0003491)	number of photobeam interruptions in an experimental apparatus (CMO:0001517)	8	102370617	108923645	Rat

Markers in Region

RH127749

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	108,736,738 - 108,736,923 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	116,825,613 - 116,825,797	NCBI	Rnor6.0
Rnor_5.0	8	116,179,935 - 116,180,119	UniSTS	Rnor5.0
RGSC_v3.4	8	113,316,098 - 113,316,282	UniSTS	RGSC3.4
Celera	8	108,041,451 - 108,041,635	UniSTS
RH 3.4 Map	8	1118.6	UniSTS
Cytogenetic Map	8	q32	UniSTS

RH129768

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	108,744,055 - 108,744,231 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	116,832,930 - 116,833,105	NCBI	Rnor6.0
Rnor_5.0	8	116,187,252 - 116,187,427	UniSTS	Rnor5.0
RGSC_v3.4	8	113,323,415 - 113,323,590	UniSTS	RGSC3.4
Celera	8	108,048,768 - 108,048,943	UniSTS
Cytogenetic Map	8	q32	UniSTS

RH139593

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	108,741,840 - 108,742,025 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	116,830,715 - 116,830,899	NCBI	Rnor6.0
Rnor_5.0	8	116,185,037 - 116,185,221	UniSTS	Rnor5.0
RGSC_v3.4	8	113,321,200 - 113,321,384	UniSTS	RGSC3.4
Celera	8	108,046,553 - 108,046,737	UniSTS
RH 3.4 Map	8	1118.6	UniSTS
Cytogenetic Map	8	q32	UniSTS

RH140652

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	108,738,658 - 108,739,067 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	116,827,533 - 116,827,941	NCBI	Rnor6.0
Rnor_5.0	8	116,181,855 - 116,182,263	UniSTS	Rnor5.0
RGSC_v3.4	8	113,318,018 - 113,318,426	UniSTS	RGSC3.4
Celera	8	108,043,371 - 108,043,779	UniSTS
RH 3.4 Map	8	1118.4	UniSTS
Cytogenetic Map	8	q32	UniSTS

BE119447

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	108,742,655 - 108,742,810 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	116,831,530 - 116,831,684	NCBI	Rnor6.0
Rnor_5.0	8	116,185,852 - 116,186,006	UniSTS	Rnor5.0
RGSC_v3.4	8	113,322,015 - 113,322,169	UniSTS	RGSC3.4
Celera	8	108,047,368 - 108,047,522	UniSTS
RH 3.4 Map	8	1119.2	UniSTS
Cytogenetic Map	8	q32	UniSTS

MARC_17265-17266:1024683815:1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	108,758,229 - 108,758,740 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	116,847,103 - 116,847,613	NCBI	Rnor6.0
Rnor_5.0	8	116,201,425 - 116,201,935	UniSTS	Rnor5.0
RGSC_v3.4	8	113,337,588 - 113,338,098	UniSTS	RGSC3.4
Celera	8	108,062,960 - 108,063,470	UniSTS
Cytogenetic Map	8	q32	UniSTS

Amigo3

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	108,742,329 - 108,743,321 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	116,831,204 - 116,832,195	NCBI	Rnor6.0
Rnor_5.0	8	116,185,526 - 116,186,517	UniSTS	Rnor5.0
RGSC_v3.4	8	113,321,689 - 113,322,680	UniSTS	RGSC3.4
Celera	8	108,047,042 - 108,048,033	UniSTS
Cytogenetic Map	8	q32	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	26	43	36	18	36			62	30	32	11
Low		17	14	5	1	5	8	11	12	5	9		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006243811	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC128059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000026854 ⟹ ENSRNOP00000026854

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	108,693,060 - 108,767,286 (+)	Ensembl
Rnor_6.0 Ensembl	8	116,826,680 - 116,856,159 (+)	Ensembl

RefSeq Acc Id:

NM_001108781 ⟹ NP_001102251

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	117,616,405 - 117,619,037 (+)	NCBI
mRatBN7.2	8	108,737,805 - 108,740,437 (+)	NCBI
Rnor_6.0	8	116,826,680 - 116,856,159 (+)	NCBI
Rnor_5.0	8	116,180,562 - 116,210,240 (+)	NCBI
RGSC_v3.4	8	113,317,165 - 113,346,646 (+)	RGD
Celera	8	108,042,518 - 108,071,499 (+)	RGD

Sequence:

show sequence

ACTCCGGGCCAGCCGGTCTCCAACCAGTTCCTCCTCCTCCTGTGTTCTGGCTGCCCCTAGACCC
CCACATCAAGGTAGAGCAGGCGGACGAGGTGACACCAGAGTTGGTCACTCTAGCTGGTGAAGGG
TGCAGTCAGGGCACGGCAGCGGGAGTGCGCAGCAGGGGTTGGTCAGACGGCCTGTAAGTACTTT
GGACCGAGGGATCCACTTCTATCATCTGCAGACGCCATGAAGGCACTGATCTTGGTGGGTGGGT
ATGGGACACGGTTGCGGCCGCTGACGCTGAGCACTCCGAAGCCATTGGTGGACTTCTGCAATAA
GCCCATTTTGCTGCACCAAGTGGAGGCACTTGCCGCGGCGGGTGTAGACCATGTGATCCTAGCA
GTGAGCTACATGTCACAGATGTTGGAGAAGGAAATGAAGGCACAAGAGCAAAGGCTTGGAATCC
GAATCTCTATGTCTCATGAAGAGGAGCCTTTGGGAACAGCTGGGCCTCTGGCCTTGGCCCGAGA
CCTACTCTCTGAGACTGCCGATCCTTTCTTCGTTCTCAACAGTGATGTGATATGTGATTTCCCC
TTCCAAGCCATGGTGCAGTTTCATCGACACCATGGCCAAGAGGGCTCCATCTTGGTAACCAAGG
TGGAAGAGCCTTCCAAGTACGGTGTGGTGGTGTGCGAGGCTGACACAGGCCGCATTCACCGTTT
TGTTGAGAAGCCGCAGGTATTTGTGTCCAATAAGATCAATGCAGGCATGTACATCCTGAGCCCT
GCTGTGCTGCAGCGCATCCAGCTGAAGCCTACATCCATTGAGAAGGAGATCTTCCCAGTTATGG
CCAAGGAGGGGCAGCTATATGCCATGGAGCTGCAGGGCTTCTGGATGGACATTGGACAGCCTAA
GGACTTCCTCACTGGCATGTGCCTCTTCCTACAGTCACTGAGACAGAAGCATCCAGAGAGACTG
TACTCAGGCCCTGGCGTTGTGGGGAATGTGCTTGTGGACCCAAGTGCCCGTATCGGTCAGAACT
GCAGCATTGGCCCCAATGTGAGCCTGGGTCCCGGTGTGGTGGTGGAGGACGGCGTGTGCATCCG
GCGGTGCACGGTGCTTCGTGATGCTCACATCCGCTCCCATTCCTGGCTTGAGTCATGCATCGTG
GGCTGGCGCTGCCGTGTAGGCCAATGGGTGCGCATGGAGAATGTCACAGTGCTGGGTGAGGATG
TCATAGTTAATGATGAACTTTACCTCAACGGAGCCAGCGTGCTGCCCCACAAGTCTATCGGGGA
GTCGGTGCCAGAACCTCGTATTATCATGTGAAGGATATGCAGGGCTGGCCAAGCCCCCACTTTA
CCATTGGCAGGGTAGGACTCAGTGCTTCAGAAGGCTCTGGACTTGGTGCCACTTGTATAGGGAG
GAGTGGATGGCTCTGAAGCTGTTGGACATCTACCTTCTGGTGGAGACAGAAGTGGACAGGATCC
TGCTGGGCATAGCACACAGGCCCCCACTCCCTCAAGAAGCACTGGGCCAGGGCTGAAGGGAATA
ATAATTTAATGCTCACTGTGGCCTGGACTGGACTCAGGCTCCCTCCCACCAGTGAGGCTATGCA
CACACAGGCAGATGGGTGGGAGTGGTAAGAGCGAGGGAATTCAGAGCTCACACAGGACGGCACT
GAACTGCAAGGCAAGGTGTGCCATCACCGCCACCGCCACAGAAAGTTCTATTAGCGCCTGTCCA
GAGCTTGGCCTTTATTCACTGCCTGAGCAAGCACTTCTTTTTCTGCAGCCTACTCTTATCACAC
CCCAAACGGGCCCTCAGCTCCCGCCACAAACCCTTGCCTGCCTGCATCATACCAGGCTCGCTCG
GGAAGGTGATTCTGCCGCTGTGCCGCCCTCCGGGGGCCCTCGATGGACATCCACAACCAGTCCC
TCT

hide sequence

RefSeq Acc Id:

XM_006243811 ⟹ XP_006243873

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	117,616,029 - 117,622,866 (+)	NCBI
mRatBN7.2	8	108,737,429 - 108,740,437 (+)	NCBI
Rnor_6.0	8	116,826,251 - 116,829,308 (+)	NCBI
Rnor_5.0	8	116,180,562 - 116,210,240 (+)	NCBI

Sequence:

show sequence

GAAGGACCCGGTTGAACTGGGTCGGGACAGGTGCTGCGGGACGGTGCCATAGCAGGGGGTGGGG
AGAGGCAGCACGGGAGGGTTGGAGATGGGGGTCAGAGCAAGTATTGAGGGCGGAGTCATCAGGG
CGGACCCGGAGTGGATTTTGAGGGAGGGGAGGGGCGGGGCGGATGGCAGCTGCCGCGTGGCGGA
CCGGGTTCCGATAGGAAGTTAAGCTTGCTTTTTCCGTTCCGCCTTTAGATCCGCCAATGGGCTT
CTGACTCGCGAGTTCTCCGGGTCCCCATGGCAGTCCAGCGCGTGGGAAATCCAATTGGCTACGT
CTGCCGCAGCGTAAAGCCTGGGCGATCGGCTGCGGGCGGCCCTGCCACGTAGTTAACAGCCGAT
TGGCTCGCCCCTGTTACGTCACTGGATGCGCCGCCTCCGGCCGGAACTCCGGGCCAGCCGGTCT
CCAACCAGTTCCTCCTCCTCCTGTGTTCTGGCTGCCCCTAGACCCCCACATCAAGACGCCATGA
AGGCACTGATCTTGGTGGGTGGGTATGGGACACGGTTGCGGCCGCTGACGCTGAGCACTCCGAA
GCCATTGGTGGACTTCTGCAATAAGCCCATTTTGCTGCACCAAGTGGAGGCACTTGCCGCGGCG
GGTGTAGACCATGTGATCCTAGCAGTGAGCTACATGTCACAGATGTTGGAGAAGGAAATGAAGG
CACAAGAGCAAAGGCTTGGAATCCGAATCTCTATGTCTCATGAAGAGGAGCCTTTGGGAACAGC
TGGGCCTCTGGCCTTGGCCCGAGACCTACTCTCTGAGACTGCCGATCCTTTCTTCGTTCTCAAC
AGTGATGTGATATGTGATTTCCCCTTCCAAGCCATGGTGCAGTTTCATCGACACCATGGCCAAG
AGGGCTCCATCTTGGTAACCAAGGTGGAAGAGCCTTCCAAGTACGGTGTGGTGGTGTGCGAGGC
TGACACAGGCCGCATTCACCGTTTTGTTGAGAAGCCGCAGGTATTTGTGTCCAATAAGATCAAT
GCAGGCATGTACATCCTGAGCCCTGCTGTGCTGCAGCGCATCCAGCTGAAGCCTACATCCATTG
AGAAGGAGATCTTCCCAGTTATGGCCAAGGAGGGGCAGCTATATGCCATGGAGCTGCAGGGCTT
CTGGATGGACATTGGACAGCCTAAGGACTTCCTCACTGGCATGTGCCTCTTCCTACAGTCACTG
AGACAGAAGCATCCAGAGAGACTGTACTCAGGCCCTGGCGTTGTGGGGAATGTGCTTGTGGACC
CAAGTGCCCGTATCGGTCAGAACTGCAGCATTGGCCCCAATGTGAGCCTGGGTCCCGGTGTGGT
GGTGGAGGACGGCGTGTGCATCCGGCGGTGCACGGTGCTTCGTGATGCTCACATCCGCTCCCAT
TCCTGGCTTGAGTCATGCATCGTGGGCTGGCGCTGCCGTGTAGGCCAATGGGTGCGCATGGAGA
ATGTCACAGTGCTGGGTGAGGATGTCATAGTTAATGATGAACTTTACCTCAACGGAGCCAGCGT
GCTGCCCCACAAGTCTATCGGGGAGTCGGTGCCAGAACCTCGTATTATCATGTGAAGGATATGC
AGGGCTGGCCAAGCCCCCACTTTACCATTGGCAGGGTAGGACTCAGTGCTTCAGAAGGCTCTGG
ACTTGGTGCCACTTGTATAGGGAGGAGTGGATGGCTCTGAAGCTGTTGGACATCTACCTTCTGG
TGGAGACAGAAGTGGACAGGATCCTGCTGGGCATAGCACACAGGCCCCCACTCCCTCAAGAAGC
ACTGGGCCAGGGCTGAAGGGAATAATAATTTAATGCTCACTGTGGCCTGGACTGGACTCAGGCT
CCCTCCCACCAGTGAGGCTATGCACACACAGGCAGATGGGTGGGAGTGGTAAGAGCGAGGGTGA
TGGGGACAGGGCCAAGGGAGCTCATAAATAGGACTCGGACTGCGTCTGATGGTGGGTTTCCAGG
ACAGCCTAGGCAGCTGAGGATGTGGCACTTGTGCTGGCTGCCTTGTCCCAGTCCTCTACAGATA
CAATGGTGGCTTTGCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001102251	(Get FASTA)	NCBI Sequence Viewer
	XP_006243873	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL77196	(Get FASTA)	NCBI Sequence Viewer
	EDL77197	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000026854.6

RefSeq Acc Id:

NP_001102251 ⟸ NM_001108781

- UniProtKB:

D4A746 (UniProtKB/TrEMBL), A6I329 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MKALILVGGYGTRLRPLTLSTPKPLVDFCNKPILLHQVEALAAAGVDHVILAVSYMSQMLEKEM
KAQEQRLGIRISMSHEEEPLGTAGPLALARDLLSETADPFFVLNSDVICDFPFQAMVQFHRHHG
QEGSILVTKVEEPSKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLQRIQLKPTS
IEKEIFPVMAKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKHPERLYSGPGVVGNVLV
DPSARIGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRM
ENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM

hide sequence

RefSeq Acc Id:

XP_006243873 ⟸ XM_006243811

- Peptide Label:

isoform X1

- Sequence:

show sequence

MRRLRPELRASRSPTSSSSSCVLAAPRPPHQDAMKALILVGGYGTRLRPLTLSTPKPLVDFCNK
PILLHQVEALAAAGVDHVILAVSYMSQMLEKEMKAQEQRLGIRISMSHEEEPLGTAGPLALARD
LLSETADPFFVLNSDVICDFPFQAMVQFHRHHGQEGSILVTKVEEPSKYGVVVCEADTGRIHRF
VEKPQVFVSNKINAGMYILSPAVLQRIQLKPTSIEKEIFPVMAKEGQLYAMELQGFWMDIGQPK
DFLTGMCLFLQSLRQKHPERLYSGPGVVGNVLVDPSARIGQNCSIGPNVSLGPGVVVEDGVCIR
RCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGE
SVPEPRIIM

hide sequence

RefSeq Acc Id:

ENSRNOP00000026854 ⟸ ENSRNOT00000026854

Protein Domains

Nucleotidyl transferase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A746-F1-model_v2	AlphaFold	D4A746	1-360	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696287

Promoter ID:

EPDNEW_R6812

Type:

initiation region

Name:

Gmppb_1

Description:

GDP-mannose pyrophosphorylase B

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	8	116,826,705 - 116,826,765	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1560458	AgrOrtholog
BioCyc Gene	G2FUF-29161	BioCyc
Ensembl Genes	ENSRNOG00000037229	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000026854.6	UniProtKB/TrEMBL
Gene3D-CATH	Hexapeptide repeat proteins	UniProtKB/TrEMBL
InterPro	GMPPB_N	UniProtKB/TrEMBL
	Hexapep_transf	UniProtKB/TrEMBL
	Hexapep_transf_CS	UniProtKB/TrEMBL
	NTP_transferase	UniProtKB/TrEMBL
	Nucleotide-diphossugar_trans	UniProtKB/TrEMBL
KEGG Report	rno:363145	UniProtKB/TrEMBL
NCBI Gene	363145	ENTREZGENE
PANTHER	MANNOSE-1-PHOSPHATE GUANYLTRANSFERASE BETA	UniProtKB/TrEMBL
	SUGAR-1-PHOSPHATE GUANYL TRANSFERASE	UniProtKB/TrEMBL
Pfam	Hexapep	UniProtKB/TrEMBL
	NTP_transferase	UniProtKB/TrEMBL
PhenoGen	Gmppb	PhenoGen
PROSITE	HEXAPEP_TRANSFERASES	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000037229	RatGTEx
Superfamily-SCOP	SSF53448	UniProtKB/TrEMBL
UniProt	A6I329	ENTREZGENE, UniProtKB/TrEMBL
	D4A746	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Gmppb	GDP-mannose pyrophosphorylase B	Gmppb_predicted	GDP-mannose pyrophosphorylase B (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Gmppb_predicted	GDP-mannose pyrophosphorylase B (predicted)	RGD1560458_predicted	similar to GDP-mannose pyrophosphorylase B (predicted)	Symbol and Name updated	1299863	APPROVED
2006-03-07	RGD1560458_predicted	similar to GDP-mannose pyrophosphorylase B (predicted)	LOC363145	similar to GDP-mannose pyrophosphorylase B	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC363145	similar to GDP-mannose pyrophosphorylase B			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)