LOC124901298 (uncharacterized LOC124901298) - Rat Genome Database

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Gene: LOC124901298 (uncharacterized LOC124901298) Homo sapiens
Analyze
Symbol: LOC124901298
Name: uncharacterized LOC124901298
RGD ID: 151673698
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38629,928,198 - 29,945,593 (-)NCBIGRCh38GRCh38hg38GRCh38
Cytogenetic Map6p22.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC124901298
42 total Variants

QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407210693GWAS859669_Hcholesterol:total lipids ratio, low density lipoprotein cholesterol measurement QTL GWAS859669 (human)5e-08cholesterol:total lipids ratio, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)62993621429936215Human
407200327GWAS849303_Hvery low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio QTL GWAS849303 (human)5e-18very low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)62993585329935854Human
407174599GWAS823575_Hmean platelet volume QTL GWAS823575 (human)3e-30mean platelet volumemean platelet volume (CMO:0001348)62992935229929353Human
407109574GWAS758550_Hcomparative body size at age 10, self-reported QTL GWAS758550 (human)6e-21comparative body size at age 10, self-reported62994390729943908Human
407219149GWAS868125_Hage at diagnosis, type 1 diabetes mellitus QTL GWAS868125 (human)0.0000008age at diagnosis, type 1 diabetes mellitus62993185029931851Human
407218253GWAS867229_Hblood protein measurement QTL GWAS867229 (human)5e-45blood protein measurementblood protein measurement (CMO:0000028)62994029929940300Human
1298458BW9_HBody weight QTL 9 (human)2.70.0002Body fat amount6691196032911960Human
407081928GWAS730904_Htriglycerides to total lipids in small VLDL percentage QTL GWAS730904 (human)3e-11triglycerides to total lipids in small VLDL percentage 62993621429936215Human
407147209GWAS796185_Hbody height QTL GWAS796185 (human)0.000007body height (VT:0001253)body height (CMO:0000106)62993899929939000Human
406967884GWAS616860_Hhemoglobin measurement QTL GWAS616860 (human)2e-11hemoglobin measurementhemoglobin measurement (CMO:0000508)62994029929940300Human
407118409GWAS767385_HOral ulcer QTL GWAS767385 (human)5e-23Oral ulcer62994260129942602Human
407220811GWAS869787_Hblood protein measurement QTL GWAS869787 (human)2e-08blood protein measurementblood protein measurement (CMO:0000028)62993793329937934Human
407145418GWAS794394_Hnasopharyngeal neoplasm QTL GWAS794394 (human)3e-31nasopharyngeal neoplasm62993891429938915Human
407204938GWAS853914_Hvery low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS853914 (human)4e-15very low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)62993621429936215Human
407013971GWAS662947_Hbipolar disorder, schizophrenia QTL GWAS662947 (human)0.0000005bipolar disorder, schizophrenia62993190029931901Human
407210452GWAS859428_Hvery low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio QTL GWAS859428 (human)5e-10very low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)62993585329935854Human
1358854MULTSCL4_HMultiple sclerosis susceptibility QTL 4 (human)Multiple sclerosis susceptibility6691196032911960Human
407159895GWAS808871_Htapasin-related protein measurement QTL GWAS808871 (human)4e-17tapasin-related protein measurement62993767529937676Human
407197651GWAS846627_Hvery low density lipoprotein cholesterol measurement, cholesterol:total lipids ratio QTL GWAS846627 (human)4e-17very low density lipoprotein cholesterol measurement, cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)62993585329935854Human
407157074GWAS806050_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS806050 (human)2e-08triglyceride measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)62993766029937661Human
407209564GWAS858540_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS858540 (human)3e-09triglyceride measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)62993766029937661Human
407108825GWAS757801_HEczematoid dermatitis, allergic rhinitis QTL GWAS757801 (human)2e-10Eczematoid dermatitis, allergic rhinitis62994011829940119Human
407158366GWAS807342_Hstreptococcus seropositivity QTL GWAS807342 (human)8e-10streptococcus seropositivity62994288629942887Human
407201241GWAS850217_Hvery low density lipoprotein cholesterol measurement, cholesterol:total lipids ratio QTL GWAS850217 (human)5e-08very low density lipoprotein cholesterol measurement, cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)62993585329935854Human
1358857MULTSCL19_HMultiple sclerosis susceptibility QTL 19 (human)Multiple sclerosis susceptibility61958431145584311Human
406964956GWAS613932_Heosinophil count QTL GWAS613932 (human)2e-74eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)62994471729944718Human
1643399BMD5_HBone mineral density QTL 5 (human)2.320.0005Bone mineral density6691196032911960Human
407082077GWAS731053_Hcholesteryl esters to total lipids in small VLDL percentage QTL GWAS731053 (human)2e-14triglycerides:total lipids ratio, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)62993585329935854Human
407131482GWAS780458_HBMI-adjusted waist-hip ratio QTL GWAS780458 (human)1e-09BMI-adjusted waist-hip ratio62994302429943025Human
407162980GWAS811956_Hplatelet count QTL GWAS811956 (human)7e-24platelet quantity (VT:0003179)platelet count (CMO:0000029)62993033929930340Human
406953575GWAS602551_Hprolyl endopeptidase FAP measurement QTL GWAS602551 (human)2e-12prolyl endopeptidase FAP measurement62993185029931851Human
407213154GWAS862130_Hgastric carcinoma QTL GWAS862130 (human)5e-09gastric carcinoma62993767529937676Human
1643569GLUCO21_HGlucose level QTL 21 (human)0.021Glucose levelnon-insulin-dependent6691196032911960Human
407066219GWAS715195_Heosinophil count QTL GWAS715195 (human)3e-55eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)62994471729944718Human
407156717GWAS805693_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS805693 (human)6e-09triglyceride measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)62993766029937661Human
407132910GWAS781886_Hbody fat percentage QTL GWAS781886 (human)8e-12body fat percentagebody fat percentage (CMO:0000302)62994270129942702Human
407131369GWAS780345_Htriglyceride measurement QTL GWAS780345 (human)7e-14triglyceride measurementblood triglyceride level (CMO:0000118)62994270129942702Human
407159146GWAS808122_Hlow density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS808122 (human)2e-09low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)62993585329935854Human
407039852GWAS688828_Hsusceptibility to pneumonia measurement QTL GWAS688828 (human)0.000005susceptibility to pneumonia measurement62994345129943452Human
407217002GWAS865978_Hblood protein measurement QTL GWAS865978 (human)5e-11blood protein measurementblood protein measurement (CMO:0000028)62993816829938169Human
407131371GWAS780347_Haspartate aminotransferase measurement, serum alanine aminotransferase measurement, low density lipoprotein triglyceride measurement, body fat percentage, high density lipoprotein cholesterol measurement, sex hormone-binding globulin measurement QTL GWAS780347 (human)3e-20aspartate aminotransferase measurement, serum alanine aminotransferase measurement, low density lipoprotein triglyceride measurement, body fat percentage, high density lipoprotein cholesterol measurement, sex hormone-binding globulin measurementblood high density lipoprotein cholesterol level (CMO:0000052)62994270129942702Human
407132907GWAS781883_Hhigh density lipoprotein cholesterol measurement QTL GWAS781883 (human)4e-13high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)62994270129942702Human
407197172GWAS846148_Hbreast cancer, lung cancer QTL GWAS846148 (human)4e-08breast cancer, lung cancer62993190029931901Human
407211767GWAS860743_Hvery low density lipoprotein cholesterol measurement, cholesterol:total lipids ratio QTL GWAS860743 (human)7e-11very low density lipoprotein cholesterol measurement, cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)62993585329935854Human
407130870GWAS779846_Hglycoprotein measurement QTL GWAS779846 (human)5e-17glycoprotein measurement62994468029944681Human
406978037GWAS627013_Hnasopharyngeal neoplasm QTL GWAS627013 (human)5e-67nasopharyngeal neoplasm62993891429938915Human
407170417GWAS819393_Herythrocyte measurement QTL GWAS819393 (human)4e-17erythrocyte measurementred blood cell measurement (CMO:0001356)62994129329941294Human
407137010GWAS785986_Hplatelet crit QTL GWAS785986 (human)1e-30platelet critplateletcrit (CMO:0001349)62994333729943338Human
407157747GWAS806723_Hphospholipid measurement, high density lipoprotein cholesterol measurement QTL GWAS806723 (human)9e-11phospholipid measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)62993766029937661Human
407164284GWAS813260_Heosinophil measurement QTL GWAS813260 (human)8e-10eosinophil measurement62994471729944718Human
407130493GWAS779469_Hanti-SARS-CoV-2 IgG measurement, response to COVID-19 vaccine QTL GWAS779469 (human)1e-09anti-SARS-CoV-2 IgG measurement, response to COVID-19 vaccineblood anti-SARS-CoV-2 antibody level (CMO:0003966)62994306229943063Human
407208703GWAS857679_Hphospholipid measurement, high density lipoprotein cholesterol measurement QTL GWAS857679 (human)3e-13phospholipid measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)62993766029937661Human
407178104GWAS827080_Hgrip strength measurement QTL GWAS827080 (human)2e-08grip strength measurement62993853629938537Human
407079549GWAS728525_Hcholesterol to total lipids in small VLDL percentage QTL GWAS728525 (human)5e-12cholesterol to total lipids in small VLDL percentage 62993621429936215Human
407294840GWAS943816_HSARS-CoV-2 antibody measurement, response to COVID-19 vaccine QTL GWAS943816 (human)2e-10SARS-CoV-2 antibody measurement, response to COVID-19 vaccineblood anti-SARS-CoV-2 antibody level (CMO:0003966)62993741629937417Human
407207047GWAS856023_Htriglycerides:total lipids ratio, very low density lipoprotein cholesterol measurement QTL GWAS856023 (human)8e-10triglycerides:total lipids ratio, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)62993585329935854Human
407134215GWAS783191_Herythrocyte count QTL GWAS783191 (human)6e-12erythrocyte countred blood cell count (CMO:0000025)62994270129942702Human
406953988GWAS602964_Hras-related protein Rab-26 measurement QTL GWAS602964 (human)2e-15ras-related protein Rab-26 measurement62994481729944818Human
407141379GWAS790355_Hbody mass index QTL GWAS790355 (human)9e-11body mass indexbody mass index (BMI) (CMO:0000105)62994144229941443Human
407166988GWAS815964_Heosinophil measurement QTL GWAS815964 (human)3e-19eosinophil measurement62994535829945359Human
407203468GWAS852444_Hvery low density lipoprotein cholesterol measurement, phospholipids:total lipids ratio QTL GWAS852444 (human)1e-08very low density lipoprotein cholesterol measurement, phospholipids:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)62993561229935613Human
407132429GWAS781405_Haspartate aminotransferase measurement QTL GWAS781405 (human)4e-17aspartate aminotransferase measurementblood aspartate aminotransferase activity level (CMO:0000580)62994270129942702Human
407198986GWAS847962_Htriglycerides:total lipids ratio, very low density lipoprotein cholesterol measurement QTL GWAS847962 (human)9e-12triglycerides:total lipids ratio, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)62993585329935854Human
406897553GWAS546529_Hskin aging measurement QTL GWAS546529 (human)4e-09skin aging measurement62993467229934673Human
407109653GWAS758629_Hheel bone mineral density QTL GWAS758629 (human)2e-17heel bone mineral densitybone mineral density (CMO:0001226)62994298229942983Human
407126037GWAS775013_HMHC class I polypeptide-related sequence A measurement QTL GWAS775013 (human)2e-11MHC class I polypeptide-related sequence A measurement62994357929943580Human
406955157GWAS604133_Htapasin-related protein measurement QTL GWAS604133 (human)2e-55tapasin-related protein measurement62993715229937153Human
407196946GWAS845922_Htriglycerides:total lipids ratio, very low density lipoprotein cholesterol measurement QTL GWAS845922 (human)8e-16triglycerides:total lipids ratio, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)62993585329935854Human
406900249GWAS549225_Hmosquito bite reaction itch intensity measurement QTL GWAS549225 (human)5e-08mosquito bite reaction itch intensity measurement62993283029932831Human
407196828GWAS845804_Hvery low density lipoprotein cholesterol measurement, phospholipids:total lipids ratio QTL GWAS845804 (human)1e-13very low density lipoprotein cholesterol measurement, phospholipids:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)62993585329935854Human
407084186GWAS733162_Hparental longevity QTL GWAS733162 (human)0.000007parental longevity62994150129941502Human
407299994GWAS948970_Hrheumatoid arthritis, hypothyroidism QTL GWAS948970 (human)2e-35rheumatoid arthritis, hypothyroidism62994089029940891Human
407081759GWAS730735_Hreticulocyte count QTL GWAS730735 (human)6e-21reticulocyte counttotal reticulocyte count (CMO:0003020)62994481729944818Human
407299995GWAS948971_Hrheumatoid arthritis, hypothyroidism QTL GWAS948971 (human)2e-35rheumatoid arthritis, hypothyroidism62993985529939856Human
407110681GWAS759657_Hbody height QTL GWAS759657 (human)2e-12body height (VT:0001253)body height (CMO:0000106)62994144029941441Human
406952860GWAS601836_Hneuronal pentraxin-1 measurement QTL GWAS601836 (human)1e-45neuronal pentraxin-1 measurement62994535829945359Human
407205925GWAS854901_Hvery low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS854901 (human)4e-09very low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)62993585329935854Human
407205412GWAS854388_Hblood protein measurement QTL GWAS854388 (human)3e-36blood protein measurementblood protein measurement (CMO:0000028)62994029929940300Human
1358839MULTSCL5_HMultiple sclerosis susceptibility QTL 5 (human)Multiple sclerosis susceptibility61958431145584311Human
407299493GWAS948469_Hrheumatoid arthritis, hypothyroidism QTL GWAS948469 (human)5e-36rheumatoid arthritis, hypothyroidism62994140429941405Human
407123104GWAS772080_Hchildhood onset asthma QTL GWAS772080 (human)8e-10childhood onset asthma62994102729941028Human
406974116GWAS623092_HC-peptide measurement QTL GWAS623092 (human)8e-08C-peptide measurement62994325329943254Human
1643377BW325_HBody weight QTL 325 (human)2.320.0005Body fat amount6691196032911960Human
407132972GWAS781948_Hmean reticulocyte volume QTL GWAS781948 (human)8e-17reticulocyte morphology trait (VT:0002424)mean corpuscular volume (CMO:0000038)62994258129942582Human
407014825GWAS663801_Hresponse to anticonvulsant QTL GWAS663801 (human)0.0000001response to anticonvulsant62994552129945522Human
1298431RA11_HRheumatoid arthritis QTL 11 (human)0.0000024Joint/bone inflammationrheumatoid arthritis61991188340191709Human
406999470GWAS648446_Hbody mass index QTL GWAS648446 (human)1e-21body mass indexbody mass index (BMI) (CMO:0000105)62994390729943908Human
407252137GWAS901113_HVaricose veins QTL GWAS901113 (human)1e-12Varicose veins62993190029931901Human
407104819GWAS753795_Heosinophil percentage of leukocytes QTL GWAS753795 (human)2e-20eosinophil percentage of leukocytesblood eosinophil count to total leukocyte count ratio (CMO:0000369)62994005829940059Human
407040690GWAS689666_Hhemoglobin measurement QTL GWAS689666 (human)1e-36hemoglobin measurementhemoglobin measurement (CMO:0000508)62994295429942955Human
407182388GWAS831364_Hblood protein measurement QTL GWAS831364 (human)3e-12blood protein measurementblood protein measurement (CMO:0000028)62994125629941257Human
407159600GWAS808576_Hcholesterol:total lipids ratio, intermediate density lipoprotein measurement QTL GWAS808576 (human)6e-10cholesterol:total lipids ratio, intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)62993621429936215Human
407053748GWAS702724_Hmonocyte percentage of leukocytes QTL GWAS702724 (human)8e-12monocyte percentage of leukocytesblood monocyte count to total leukocyte count ratio (CMO:0000374)62994299029942991Human
407104824GWAS753800_Hsystemic lupus erythematosus QTL GWAS753800 (human)2e-30systemic lupus erythematosus62994204629942047Human
407136319GWAS785295_Hlymphocyte count QTL GWAS785295 (human)2e-24lymphocyte countblood lymphocyte count (CMO:0000031)62994346229943463Human


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XR_007059541
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38629,928,198 - 29,945,593 (-)NCBI

Additional Information

Database Acc Id Source(s)
COSMIC LOC124901298 COSMIC
GTEx LOC124901298 GTEx
Human Proteome Map LOC124901298 Human Proteome Map
NCBI Gene LOC124901298 ENTREZGENE