CHRNA5 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 7 | 47,383,792 - 47,425,841 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 47,382,860 - 47,425,871 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 52,760,970 - 52,784,694 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CHRNA5 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 15 | 78,565,520 - 78,595,269 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 78,565,520 - 78,595,269 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 15 | 78,857,862 - 78,887,611 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 15 | 76,644,961 - 76,673,515 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 15 | 76,644,960 - 76,673,513 | NCBI | | | | | Celera | 15 | 55,794,174 - 55,823,924 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | q25.1 | NCBI | | | | | HuRef | 15 | 55,614,929 - 55,644,700 (+) | NCBI | | HuRef | | | CHM1_1 | 15 | 78,976,380 - 79,006,179 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 76,428,193 - 76,457,938 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Chrna5 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 54,888,112 - 54,918,704 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 54,888,164 - 54,915,063 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 54,980,827 - 55,011,420 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 54,980,880 - 55,007,779 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 54,828,687 - 54,855,586 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 54,784,760 - 54,804,712 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 52,224,119 - 52,251,187 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | B | NCBI | | | | | cM Map | 9 | 29.84 | NCBI | | | | |
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Chrna5 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 64,265,879 - 64,294,233 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 55,369,794 - 55,398,526 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 55,369,794 - 55,398,146 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 60,911,231 - 60,939,461 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 59,190,233 - 59,218,459 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 57,054,472 - 57,082,703 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 59,561,817 - 59,590,172 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 59,561,721 - 59,590,172 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 58,143,974 - 58,172,330 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 58,538,002 - 58,566,388 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 58,557,055 - 58,585,442 (+) | NCBI | | | | | Celera | 8 | 54,856,809 - 54,885,137 (+) | NCBI | | Celera | | | RH 3.4 Map | 8 | 615.2 | RGD | | | | | Cytogenetic Map | 8 | q24 | NCBI | | | | |
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Chrna5 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955450 | 946,898 - 974,457 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955450 | 945,400 - 974,129 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CHRNA5 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 16 | 67,777,939 - 67,807,732 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 15 | 71,943,824 - 71,971,602 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 15 | 57,493,730 - 57,530,463 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 15 | 76,457,459 - 76,486,376 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 15 | 76,455,165 - 76,486,376 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CHRNA5 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 13 | 38,343,966 - 38,355,534 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 13 | 38,346,104 - 38,355,468 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 13 | 38,303,745 - 38,339,919 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 13 | 38,817,161 - 38,853,192 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 13 | 38,819,299 - 38,851,688 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 13 | 38,508,310 - 38,544,251 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 13 | 38,617,724 - 38,654,019 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 13 | 39,092,761 - 39,127,369 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Chrna5 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 118,602,432 - 118,644,746 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936471 | 36,452,965 - 36,492,618 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936471 | 36,451,070 - 36,492,774 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CHRNA5 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 26 | 4,747,734 - 4,779,231 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 26 | 4,749,766 - 4,776,822 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 137,018,864 - 137,048,250 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Chrna5 (Heterocephalus glaber - naked mole-rat) |
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