BTK (Bruton tyrosine kinase) - Rat Genome Database

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Gene: BTK (Bruton tyrosine kinase) Sus scrofa
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Symbol: BTK
Name: Bruton tyrosine kinase
RGD ID: 14174315
Description: ENCODES a protein that exhibits protein tyrosine kinase activity (ortholog); INVOLVED IN B cell affinity maturation (ortholog); cell maturation (ortholog); cellular response to interleukin-7 (ortholog); PARTICIPATES IN erythropoietin signaling pathway; FasL mediated signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Adenoviridae Infections (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 1 (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Bruton agammaglobulinemia tyrosine kinase; tyrosine-protein kinase BTK
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX82,981,515 - 83,014,573 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X82,981,512 - 83,014,475 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
adaptive immune response  (IBA)
B cell affinity maturation  (IEA,ISO)
B cell receptor signaling pathway  (IBA,IEA)
cell maturation  (IEA,ISO)
cellular response to interleukin-7  (IEA,ISO)
cellular response to molecule of fungal origin  (ISO)
cellular response to reactive oxygen species  (ISO)
eosinophil homeostasis  (ISO)
histamine secretion by mast cell  (ISO)
intracellular signal transduction  (IEA)
monocyte proliferation  (ISO)
negative regulation of B cell activation  (ISO)
negative regulation of B cell proliferation  (IEA,ISO)
negative regulation of cytokine production  (IEA)
negative regulation of interleukin-10 production  (ISO)
negative regulation of leukocyte proliferation  (ISO)
neutrophil homeostasis  (ISO)
peptidyl-tyrosine autophosphorylation  (ISO)
peptidyl-tyrosine phosphorylation  (ISO)
positive regulation of B cell proliferation  (ISO)
positive regulation of cGAS/STING signaling pathway  (ISO)
positive regulation of immunoglobulin production  (ISO)
positive regulation of interleukin-17A production  (ISO)
positive regulation of interleukin-6 production  (ISO)
positive regulation of NLRP3 inflammasome complex assembly  (IEA)
positive regulation of phagocytosis  (ISO)
positive regulation of synoviocyte proliferation  (ISO)
positive regulation of tumor necrosis factor production  (ISO)
positive regulation of type I hypersensitivity  (ISO)
positive regulation of type III hypersensitivity  (ISO)
protein autophosphorylation  (ISO)
protein phosphorylation  (ISO)
proteoglycan catabolic process  (ISO)
response to lipopolysaccharide  (ISO)
T cell receptor signaling pathway  (IBA)

Cellular Component

References
Additional References at PubMed
PMID:14681463   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
BTK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX82,981,515 - 83,014,573 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X82,981,512 - 83,014,475 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
BTK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X101,349,450 - 101,390,796 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX101,349,338 - 101,390,796 (-)EnsemblGRCh38hg38GRCh38
GRCh37X100,604,438 - 100,645,784 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X100,491,098 - 100,527,838 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X100,410,586 - 100,447,327NCBI
CeleraX101,123,894 - 101,160,669 (-)NCBICelera
Cytogenetic MapXq22.1NCBI
HuRefX90,410,583 - 90,447,505 (-)NCBIHuRef
CHM1_1X100,497,918 - 100,534,692 (-)NCBICHM1_1
T2T-CHM13v2.0X99,793,571 - 99,834,908 (-)NCBIT2T-CHM13v2.0
Btk
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X133,443,083 - 133,484,366 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX133,443,085 - 133,484,319 (-)EnsemblGRCm39 Ensembl
GRCm38X134,542,334 - 134,583,628 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX134,542,336 - 134,583,570 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X131,076,880 - 131,117,679 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X129,888,761 - 129,929,466 (-)NCBIMGSCv36mm8
CeleraX117,421,885 - 117,462,725 (-)NCBICelera
Cytogenetic MapXE3NCBI
cM MapX56.18NCBI
Btk
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X102,016,070 - 102,055,448 (-)NCBIGRCr8
mRatBN7.2X97,722,796 - 97,762,315 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX97,722,802 - 97,761,853 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX99,397,016 - 99,436,088 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X102,907,749 - 102,946,794 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X100,410,180 - 100,449,237 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X105,360,922 - 105,390,580 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX105,360,922 - 105,390,580 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X105,250,666 - 105,279,934 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X121,998,935 - 122,030,289 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X122,072,367 - 122,103,722 (-)NCBI
CeleraX98,764,036 - 98,794,122 (-)NCBICelera
Cytogenetic MapXq32NCBI
Btk
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555037,482,793 - 7,515,120 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555037,483,819 - 7,515,085 (-)NCBIChiLan1.0ChiLan1.0
BTK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X100,948,666 - 100,985,544 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X100,952,265 - 100,989,149 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X90,551,874 - 90,588,786 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X100,684,017 - 100,720,868 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX100,684,017 - 100,725,187 (-)Ensemblpanpan1.1panPan2
BTK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X75,270,952 - 75,302,663 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX75,270,979 - 75,302,562 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0X76,691,359 - 76,723,087 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX76,691,367 - 76,723,042 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X74,255,464 - 74,287,205 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X75,915,885 - 75,947,610 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X75,678,325 - 75,710,045 (-)NCBIUU_Cfam_GSD_1.0
Btk
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X63,007,672 - 63,045,710 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936813429,224 - 463,441 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936813429,400 - 467,481 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BTK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X89,690,569 - 89,727,420 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606514,609,796 - 14,647,019 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Btk
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249021,182,682 - 1,216,171 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249021,173,101 - 1,216,662 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in BTK
421 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000013662   ⟹   ENSSSCP00000013290
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX82,981,515 - 83,014,573 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000025835   ⟹   ENSSSCP00000025530
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX82,981,515 - 83,014,573 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000097469   ⟹   ENSSSCP00000077524
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX82,981,518 - 83,014,463 (-)Ensembl
RefSeq Acc Id: NM_001243576   ⟹   NP_001230505
RefSeq Status: VALIDATED
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X82,981,512 - 83,014,475 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001230505   ⟸   NM_001243576
- UniProtKB: A0A8D1AME0 (UniProtKB/TrEMBL),   A0A8W4FDY6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000025530   ⟸   ENSSSCT00000025835
Ensembl Acc Id: ENSSSCP00000013290   ⟸   ENSSSCT00000013662
Ensembl Acc Id: ENSSSCP00000077524   ⟸   ENSSSCT00000097469
Protein Domains
PH   Protein kinase   SH2   SH3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000026742 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005014014 UniProtKB/TrEMBL
  ENSSSCG00015018253 UniProtKB/TrEMBL
  ENSSSCG00025048323 UniProtKB/TrEMBL
  ENSSSCG00030033633 UniProtKB/TrEMBL
  ENSSSCG00035060034 UniProtKB/TrEMBL
  ENSSSCG00040050338 UniProtKB/TrEMBL
  ENSSSCG00045014738 UniProtKB/TrEMBL
  ENSSSCG00050039216 UniProtKB/TrEMBL
  ENSSSCG00055010356 UniProtKB/TrEMBL
  ENSSSCG00060072862 UniProtKB/TrEMBL
  ENSSSCG00065019790 UniProtKB/TrEMBL
  ENSSSCG00070028800 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000013662.5 UniProtKB/TrEMBL
  ENSSSCT00000025835 ENTREZGENE
  ENSSSCT00000025835.3 UniProtKB/TrEMBL
  ENSSSCT00000097469.1 UniProtKB/TrEMBL
  ENSSSCT00005022743.1 UniProtKB/TrEMBL
  ENSSSCT00005022793.1 UniProtKB/TrEMBL
  ENSSSCT00015024195.1 UniProtKB/TrEMBL
  ENSSSCT00015024297.1 UniProtKB/TrEMBL
  ENSSSCT00015024428.1 UniProtKB/TrEMBL
  ENSSSCT00025065809.1 UniProtKB/TrEMBL
  ENSSSCT00025066094.1 UniProtKB/TrEMBL
  ENSSSCT00025066359.1 UniProtKB/TrEMBL
  ENSSSCT00030046587.1 UniProtKB/TrEMBL
  ENSSSCT00030046642.1 UniProtKB/TrEMBL
  ENSSSCT00030046708.1 UniProtKB/TrEMBL
  ENSSSCT00035080507.1 UniProtKB/TrEMBL
  ENSSSCT00035080512.1 UniProtKB/TrEMBL
  ENSSSCT00035080524.1 UniProtKB/TrEMBL
  ENSSSCT00040068039.1 UniProtKB/TrEMBL
  ENSSSCT00040068173.1 UniProtKB/TrEMBL
  ENSSSCT00040068339.1 UniProtKB/TrEMBL
  ENSSSCT00045025128.1 UniProtKB/TrEMBL
  ENSSSCT00045025235.1 UniProtKB/TrEMBL
  ENSSSCT00050052901.1 UniProtKB/TrEMBL
  ENSSSCT00050052908.1 UniProtKB/TrEMBL
  ENSSSCT00050052910.1 UniProtKB/TrEMBL
  ENSSSCT00055020293.1 UniProtKB/TrEMBL
  ENSSSCT00055020378.1 UniProtKB/TrEMBL
  ENSSSCT00060099623.1 UniProtKB/TrEMBL
  ENSSSCT00060099705.1 UniProtKB/TrEMBL
  ENSSSCT00060099761.1 UniProtKB/TrEMBL
  ENSSSCT00065026406.1 UniProtKB/TrEMBL
  ENSSSCT00070057778.1 UniProtKB/TrEMBL
  ENSSSCT00070057784.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
  3.30.505.10 UniProtKB/TrEMBL
  SH3 Domains UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro BTK_SH3 UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  Non-receptor_tyrosine_kinases UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  PH_domain UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/TrEMBL
  SH2 UniProtKB/TrEMBL
  SH2_dom_sf UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
  Tyr_kinase_AS UniProtKB/TrEMBL
  Tyr_kinase_cat_dom UniProtKB/TrEMBL
  Znf_Btk_motif UniProtKB/TrEMBL
NCBI Gene BTK ENTREZGENE
PANTHER TYROSINE-PROTEIN KINASE UniProtKB/TrEMBL
  TYROSINE-PROTEIN KINASE BTK UniProtKB/TrEMBL
Pfam BTK UniProtKB/TrEMBL
  PF00169 UniProtKB/TrEMBL
  Pkinase_Tyr UniProtKB/TrEMBL
  SH2 UniProtKB/TrEMBL
  SH3_1 UniProtKB/TrEMBL
PRINTS SH2DOMAIN UniProtKB/TrEMBL
  SH3DOMAIN UniProtKB/TrEMBL
  TECBTKDOMAIN UniProtKB/TrEMBL
  TYRKINASE UniProtKB/TrEMBL
PROSITE PH_DOMAIN UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_TYR UniProtKB/TrEMBL
  SH2 UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
  ZF_BTK UniProtKB/TrEMBL
SMART BTK UniProtKB/TrEMBL
  SH2 UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
  SM00233 UniProtKB/TrEMBL
  TyrKc UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF50044 UniProtKB/TrEMBL
  SSF55550 UniProtKB/TrEMBL
  SSF56112 UniProtKB/TrEMBL
UniProt A0A4X1VZ31_PIG UniProtKB/TrEMBL
  A0A8D0S7Y0_PIG UniProtKB/TrEMBL
  A0A8D1AME0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1XTQ8_PIG UniProtKB/TrEMBL
  A0A8W4FDY6 ENTREZGENE, UniProtKB/TrEMBL
  I3LN58_PIG UniProtKB/TrEMBL
UniProt Secondary A0A4X1W3S0 UniProtKB/TrEMBL
  F1S1L0 UniProtKB/TrEMBL
VGNC ID VGNC:85914 ENTREZGENE