ST13 (ST13 Hsp70 interacting protein) - Rat Genome Database

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Gene: ST13 (ST13 Hsp70 interacting protein) Sus scrofa
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Symbol: ST13
Name: ST13 Hsp70 interacting protein
RGD ID: 13990947
Description: ENCODES a protein that exhibits dATP binding (ortholog); Hsp70 protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN chaperone cofactor-dependent protein refolding (ortholog); negative regulation of protein refolding (ortholog); response to bacterium (ortholog); PARTICIPATES IN androgen signaling pathway; chaperone mediated autophagy pathway; ASSOCIATED WITH adenylosuccinase lyase deficiency (ortholog); Rubinstein-Taybi syndrome (ortholog); FOUND IN protein-containing complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: hsc70-interacting protein; suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl57,583,048 - 7,617,762 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.157,583,074 - 7,617,766 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.254,763,686 - 4,796,346 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ST13
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl57,583,048 - 7,617,762 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.157,583,074 - 7,617,766 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.254,763,686 - 4,796,346 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ST13
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382240,824,535 - 40,856,639 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2240,824,535 - 40,856,639 (-)EnsemblGRCh38hg38GRCh38
GRCh372241,220,539 - 41,252,643 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362239,550,545 - 39,582,633 (-)NCBINCBI36Build 36hg18NCBI36
Build 342239,545,102 - 39,577,187NCBI
Celera2225,024,269 - 25,056,358 (-)NCBICelera
Cytogenetic Map22q13.2NCBI
HuRef2224,182,572 - 24,215,046 (-)NCBIHuRef
CHM1_12241,179,290 - 41,211,764 (-)NCBICHM1_1
T2T-CHM13v2.02241,296,730 - 41,328,831 (-)NCBIT2T-CHM13v2.0
St13
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391581,247,869 - 81,284,278 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1581,247,870 - 81,284,278 (-)EnsemblGRCm39 Ensembl
GRCm381581,365,044 - 81,399,694 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1581,363,669 - 81,400,077 (-)EnsemblGRCm38mm10GRCm38
MGSCv371581,195,474 - 81,230,124 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361581,192,299 - 81,226,949 (-)NCBIMGSCv36mm8
Celera1583,483,114 - 83,517,731 (-)NCBICelera
Cytogenetic Map15E1NCBI
cM Map1538.07NCBI
St13
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87114,769,758 - 114,805,877 (-)NCBIGRCr8
mRatBN7.27112,891,007 - 112,925,727 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7112,844,375 - 112,925,945 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7114,653,298 - 114,688,067 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07116,876,850 - 116,911,568 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07116,846,210 - 116,880,977 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07122,585,770 - 122,635,731 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7122,585,771 - 122,635,731 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07122,561,392 - 122,612,277 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47119,694,123 - 119,728,936 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17119,728,353 - 119,763,166 (-)NCBI
Celera7109,210,016 - 109,245,175 (-)NCBICelera
Cytogenetic Map7q34NCBI
St13
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541326,476,469 - 26,507,671 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541326,478,579 - 26,507,671 (-)NCBIChiLan1.0ChiLan1.0
ST13
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22350,656,928 - 50,687,437 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12253,355,816 - 53,387,712 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02221,719,713 - 21,751,912 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12239,815,337 - 39,848,049 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2239,815,337 - 39,848,049 (-)Ensemblpanpan1.1panPan2
ST13
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11024,379,997 - 24,411,764 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1024,379,997 - 24,411,766 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1024,314,161 - 24,345,833 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01025,127,715 - 25,159,445 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1025,127,684 - 25,161,322 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11024,842,961 - 24,874,594 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01025,163,854 - 25,195,541 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01025,338,235 - 25,369,960 (+)NCBIUU_Cfam_GSD_1.0
St13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049457,966,770 - 7,998,826 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936492976,928 - 1,010,748 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ST13
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11923,373,970 - 23,413,054 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1923,375,723 - 23,412,742 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045102,161,727 - 102,195,149 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
St13
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247527,634,970 - 7,661,974 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247527,634,910 - 7,663,135 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ST13
1069 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000000077   ⟹   ENSSSCP00000000076
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl57,583,048 - 7,616,080 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000047691   ⟹   ENSSSCP00000052320
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl57,583,095 - 7,617,762 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000085517   ⟹   ENSSSCP00000063455
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl57,583,048 - 7,616,080 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000086118   ⟹   ENSSSCP00000071467
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl57,591,685 - 7,616,079 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000098740   ⟹   ENSSSCP00000075609
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl57,588,213 - 7,616,392 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000104502   ⟹   ENSSSCP00000080757
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl57,588,213 - 7,616,392 (+)Ensembl
RefSeq Acc Id: XM_003481531   ⟹   XP_003481579
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.157,583,074 - 7,617,766 (+)NCBI
Sequence:
RefSeq Acc Id: XP_003481579   ⟸   XM_003481531
- UniProtKB: A0A4X1VWC1 (UniProtKB/TrEMBL),   A0A0B8RVG5 (UniProtKB/TrEMBL),   A0A287B8B1 (UniProtKB/TrEMBL),   A0A8D1AE89 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000071467   ⟸   ENSSSCT00000086118
Ensembl Acc Id: ENSSSCP00000063455   ⟸   ENSSSCT00000085517
Ensembl Acc Id: ENSSSCP00000000076   ⟸   ENSSSCT00000000077
Ensembl Acc Id: ENSSSCP00000052320   ⟸   ENSSSCT00000047691
Ensembl Acc Id: ENSSSCP00000075609   ⟸   ENSSSCT00000098740
Ensembl Acc Id: ENSSSCP00000080757   ⟸   ENSSSCT00000104502
Protein Domains
STI1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000000071 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015062734 UniProtKB/TrEMBL
  ENSSSCG00025010543 UniProtKB/TrEMBL
  ENSSSCG00030005288 UniProtKB/TrEMBL
  ENSSSCG00035052455 UniProtKB/TrEMBL
  ENSSSCG00040019679 UniProtKB/TrEMBL
  ENSSSCG00045028863 UniProtKB/TrEMBL
  ENSSSCG00050053331 UniProtKB/TrEMBL
  ENSSSCG00055015752 UniProtKB/TrEMBL
  ENSSSCG00060049230 UniProtKB/TrEMBL
  ENSSSCG00065027260 UniProtKB/TrEMBL
  ENSSSCG00070028186 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000000077.4 UniProtKB/TrEMBL
  ENSSSCT00000047691 ENTREZGENE
  ENSSSCT00000047691.1 UniProtKB/TrEMBL
  ENSSSCT00000085517.1 UniProtKB/TrEMBL
  ENSSSCT00000086118.2 UniProtKB/TrEMBL
  ENSSSCT00000098740.1 UniProtKB/TrEMBL
  ENSSSCT00000104502.1 UniProtKB/TrEMBL
  ENSSSCT00015083908.1 UniProtKB/TrEMBL
  ENSSSCT00015084059.1 UniProtKB/TrEMBL
  ENSSSCT00025013893.1 UniProtKB/TrEMBL
  ENSSSCT00025013919.1 UniProtKB/TrEMBL
  ENSSSCT00025013932.1 UniProtKB/TrEMBL
  ENSSSCT00025013960.1 UniProtKB/TrEMBL
  ENSSSCT00030007252.1 UniProtKB/TrEMBL
  ENSSSCT00030007257.1 UniProtKB/TrEMBL
  ENSSSCT00035069924.1 UniProtKB/TrEMBL
  ENSSSCT00035069925.1 UniProtKB/TrEMBL
  ENSSSCT00035069933.1 UniProtKB/TrEMBL
  ENSSSCT00035069938.1 UniProtKB/TrEMBL
  ENSSSCT00035069944.1 UniProtKB/TrEMBL
  ENSSSCT00040026566.1 UniProtKB/TrEMBL
  ENSSSCT00040026581.1 UniProtKB/TrEMBL
  ENSSSCT00040026632.1 UniProtKB/TrEMBL
  ENSSSCT00045049302.1 UniProtKB/TrEMBL
  ENSSSCT00045049438.1 UniProtKB/TrEMBL
  ENSSSCT00045049597.1 UniProtKB/TrEMBL
  ENSSSCT00050072650.1 UniProtKB/TrEMBL
  ENSSSCT00050072654.1 UniProtKB/TrEMBL
  ENSSSCT00050072658.1 UniProtKB/TrEMBL
  ENSSSCT00055031359.1 UniProtKB/TrEMBL
  ENSSSCT00055031424.1 UniProtKB/TrEMBL
  ENSSSCT00055031614.1 UniProtKB/TrEMBL
  ENSSSCT00055031676.1 UniProtKB/TrEMBL
  ENSSSCT00060066853.1 UniProtKB/TrEMBL
  ENSSSCT00060066860.1 UniProtKB/TrEMBL
  ENSSSCT00060066862.1 UniProtKB/TrEMBL
  ENSSSCT00060066868.1 UniProtKB/TrEMBL
  ENSSSCT00065036710.1 UniProtKB/TrEMBL
  ENSSSCT00065036717.1 UniProtKB/TrEMBL
  ENSSSCT00065036732.1 UniProtKB/TrEMBL
  ENSSSCT00065036736.1 UniProtKB/TrEMBL
  ENSSSCT00070056553.1 UniProtKB/TrEMBL
  ENSSSCT00070056555.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.260.100 UniProtKB/TrEMBL
  1.25.40.10 UniProtKB/TrEMBL
  6.10.250.3420 UniProtKB/TrEMBL
InterPro Hip_N UniProtKB/TrEMBL
  STI1 UniProtKB/TrEMBL
  STI1_HS-bd UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/TrEMBL
  TPR_repeat UniProtKB/TrEMBL
KEGG Report ssc:100624451 UniProtKB/TrEMBL
NCBI Gene ST13 ENTREZGENE
PANTHER HSC70-INTERACTING PROTEIN UniProtKB/TrEMBL
  HSC70-INTERACTING PROTEIN UniProtKB/TrEMBL
Pfam HipN UniProtKB/TrEMBL
  STI1 UniProtKB/TrEMBL
  TPR_8 UniProtKB/TrEMBL
PROSITE TPR UniProtKB/TrEMBL
SMART STI1 UniProtKB/TrEMBL
  TPR UniProtKB/TrEMBL
Superfamily-SCOP SSF48452 UniProtKB/TrEMBL
UniProt A0A0B8RVG5 ENTREZGENE
  A0A287B8B1 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1VWC1 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1W1N6_PIG UniProtKB/TrEMBL
  A0A5G2R2Q0_PIG UniProtKB/TrEMBL
  A0A8D1A8A6_PIG UniProtKB/TrEMBL
  A0A8D1AE89 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1CXT3_PIG UniProtKB/TrEMBL
  A0A8D1DRT9_PIG UniProtKB/TrEMBL
  A0A8D1DSV2_PIG UniProtKB/TrEMBL
  A0A8D1DTX0_PIG UniProtKB/TrEMBL
  A0A8D1N233_PIG UniProtKB/TrEMBL
  A0A8D1VQK7_PIG UniProtKB/TrEMBL
  A0A8D1VSK8_PIG UniProtKB/TrEMBL
  A0A8D1Y4K6_PIG UniProtKB/TrEMBL
  A0A8W4F8G9_PIG UniProtKB/TrEMBL
  A0A8W4FNI4_PIG UniProtKB/TrEMBL
UniProt Secondary A0A5G2QYZ3 UniProtKB/TrEMBL
  F1SRB9 UniProtKB/TrEMBL
VGNC ID VGNC:112551 ENTREZGENE