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Gene: HNF1B (HNF1 homeobox B) Sus scrofa

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Symbol:

HNF1B

Name:

HNF1 homeobox B

RGD ID:

13918311

Description:

ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); embryonic morphogenesis (ortholog); endocrine pancreas development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Autosomal Dominant Tubulointerstitial Kidney Disease 2 (ortholog); FOUND IN nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

FPC-binding protein; FPCB; hepatocyte nuclear factor 1-beta; HNF-1-beta; HNF-1B; LF-B3; TCF-2; TCF2; transcription factor 2, hepatic; variant hepatic nuclear factor; variant hepatic nuclear factor 1; vHNF-1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	HNF1B (HNF1 homeobox B)	HGNC	Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Hnf1b (HNF1 homeobox B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Hnf1b (HNF1 homeobox B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Hnf1b (HNF1 homeobox B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	HNF1B (HNF1 homeobox B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	HNF1B (HNF1 homeobox B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Hnf1b (HNF1 homeobox B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	HNF1B (HNF1 homeobox B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Hnf1b (HNF1 homeobox B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	39,143,121 - 39,201,631 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	39,143,119 - 39,201,631 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	40,788,316 - 40,846,557 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HNF1B	Pig	kidney disease		ISO	HNF1B (Homo sapiens)	9068941	DNA:mutation and deletions::multiple	RGD	PMID:16971658 and REF_RGD_ID:10402549
HNF1B	Pig	kidney disease		ISO	HNF1B (Homo sapiens)	9068941	associated with Diabetes Mellitus more ...	RGD	PMID:17971380 and REF_RGD_ID:2312749
HNF1B	Pig	pancreas disease		ISO	HNF1B (Homo sapiens)	9068941	associated with Diabetes Mellitus more ...	RGD	PMID:15068978 and REF_RGD_ID:2312751
HNF1B	Pig	type 2 diabetes mellitus	susceptibility	ISO	HNF1B (Homo sapiens)	9068941	renal cysts and diabetes syndrome more ...	RGD	PMID:11317673 and REF_RGD_ID:1601484
HNF1B	Pig	type 2 diabetes mellitus	no_association	ISO	HNF1B (Homo sapiens)	9068941		RGD	PMID:15883474 and REF_RGD_ID:2312750

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HNF1B	Pig	autism spectrum disorder		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism spectrum disorder	ClinVar	PMID:21844811 more ...
HNF1B	Pig	autistic disorder		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism	ClinVar	PMID:21681106 and PMID:30208311
HNF1B	Pig	Autosomal Dominant Tubulointerstitial Kidney Disease 2		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autosomal dominant medullary cystic kidney disease with or without hyperuricemia	ClinVar	PMID:12148114 more ...
HNF1B	Pig	CAKUT		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital anomalies of kidney and urinary tract	ClinVar	PMID:15930087 more ...
HNF1B	Pig	chromophobe renal cell carcinoma		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Chromophobe renal cell carcinoma	ClinVar	PMID:15649945 more ...
HNF1B	Pig	chromosome 17q12 deletion syndrome		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Chromosome 17q12 deletion syndrome	ClinVar	PMID:17924346 more ...
HNF1B	Pig	diabetes mellitus		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Monogenic diabetes	ClinVar	PMID:15930087 more ...
HNF1B	Pig	Familial Juvenile Hyperuricemic Nephropathy 3		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Hyperuricemic nephropathy and familial juvenile type 3	ClinVar	PMID:19639018 more ...
HNF1B	Pig	genetic disease		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:11845237 more ...
HNF1B	Pig	hyperphosphatasia with impaired intellectual development syndrome 5		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: GLYCOSYLPHOSPHATIDYLINOSITOL BIOSYNTHESIS DEFECT 11	ClinVar	PMID:12148114 more ...
HNF1B	Pig	maturity-onset diabetes of the young		ISO	HNF1B (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10868855 more ...
HNF1B	Pig	maturity-onset diabetes of the young		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Maturity onset diabetes mellitus in young	ClinVar	PMID:10868855 more ...
HNF1B	Pig	maturity-onset diabetes of the young		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Maturity onset diabetes mellitus in young	ClinVar	PMID:10868855 more ...
HNF1B	Pig	maturity-onset diabetes of the young		ISO	HNF1B (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10868855 more ...
HNF1B	Pig	maturity-onset diabetes of the young		ISO	HNF1B (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10868855 more ...
HNF1B	Pig	maturity-onset diabetes of the young		ISO	HNF1B (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10868855 more ...
HNF1B	Pig	maturity-onset diabetes of the young		ISO	HNF1B (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10868855 more ...
HNF1B	Pig	maturity-onset diabetes of the young		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Maturity onset diabetes mellitus in young	ClinVar	PMID:10868855 more ...
HNF1B	Pig	maturity-onset diabetes of the young		ISO	HNF1B (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10868855 more ...
HNF1B	Pig	maturity-onset diabetes of the young type 1		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Type 2 diabetes mellitus	ClinVar	PMID:12148114 more ...
HNF1B	Pig	maturity-onset diabetes of the young type 5		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Renal cysts and diabetes syndrome	ClinVar	PMID:10484768 more ...
HNF1B	Pig	Neurodevelopmental Disorders		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868
HNF1B	Pig	nonpapillary renal cell carcinoma		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Nonpapillary renal cell carcinoma	ClinVar	PMID:12148114 more ...
HNF1B	Pig	ovarian cancer		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Ovarian cancer	ClinVar	PMID:12161522 more ...
HNF1B	Pig	polycystic liver disease		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital cystic disease of liver	ClinVar	PMID:15930087 more ...
HNF1B	Pig	polycystic liver disease 1		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Isolated autosomal dominant polycystic liver disease	ClinVar	PMID:15930087 more ...
HNF1B	Pig	schizophrenia		ISO	HNF1B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Schizophrenia	ClinVar	PMID:21681106 and PMID:30208311
HNF1B	Pig	type 2 diabetes mellitus		ISO	HNF1B (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:12148114 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HNF1B	Pig	Prostatic Neoplasms		ISO	HNF1B (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:18264096 and PMID:18758462

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HNF1B	Pig	maturity-onset diabetes of the young type 5		ISO	HNF1B (Homo sapiens)	7240710		OMIM
HNF1B	Pig	renal cell carcinoma		ISO	HNF1B (Homo sapiens)	7240710		OMIM
HNF1B	Pig	type 2 diabetes mellitus		ISO	HNF1B (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HNF1B	Pig	animal organ development	involved_in	IEA	ARBA:ARBA00029247	150520179		UniProt	GO_REF:0000117
HNF1B	Pig	anterior/posterior pattern specification	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	apoptotic process	acts_upstream_of	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	branching morphogenesis of an epithelial tube	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	circadian regulation of gene expression		ISO	Hnf1b (Rattus norvegicus)	9068941		RGD	PMID:9545279 and REF_RGD_ID:2312721
HNF1B	Pig	embryonic digestive tract morphogenesis	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	embryonic morphogenesis		ISO	Hnf1b (Rattus norvegicus)	9068941		RGD	PMID:12860991 and REF_RGD_ID:1599302
HNF1B	Pig	endocrine pancreas development	involved_in	ISS	UniProtKB:P35680-1	150520179		UniProt	GO_REF:0000024
HNF1B	Pig	endoderm development	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	endodermal cell fate specification	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	epithelial cell proliferation	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	epithelium development	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	gene expression	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	genitalia development	involved_in	ISS	UniProtKB:P35680-1	150520179		UniProt	GO_REF:0000024
HNF1B	Pig	hepatoblast differentiation	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	hepatocyte differentiation		ISO	Hnf1b (Rattus norvegicus)	9068941		RGD	PMID:18286537 and REF_RGD_ID:2312718
HNF1B	Pig	hindbrain development	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	inner cell mass cell differentiation	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	insulin secretion	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	insulin secretion	involved_in	IEA	InterPro:IPR039066	150520179		InterPro	GO_REF:0000002
HNF1B	Pig	kidney development	involved_in	ISS	UniProtKB:P35680	150520179		UniProt	GO_REF:0000024
HNF1B	Pig	kidney development	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	kidney development	involved_in	IEA	UniProtKB:P35680 and ensembl:ENSP00000480291	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	kidney morphogenesis	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	liver development	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	liver development	involved_in	IEA	InterPro:IPR039066	150520179		InterPro	GO_REF:0000002
HNF1B	Pig	mesenchymal cell apoptotic process involved in metanephros development	acts_upstream_of	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	mesonephric duct development	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	mesonephric duct formation	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	mesonephric tubule development	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	negative regulation of apoptotic process	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	negative regulation of mesenchymal cell apoptotic process involved in metanephros development	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	negative regulation of transcription by RNA polymerase II	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	nephric duct development	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	nephric duct formation	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	Notch signaling pathway	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	pancreas development	involved_in	IEA	InterPro:IPR039066	150520179		InterPro	GO_REF:0000002
HNF1B	Pig	positive regulation of DNA-templated transcription	involved_in	IEA	UniProtKB:P35680 and ensembl:ENSP00000480291	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	positive regulation of DNA-templated transcription	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	positive regulation of DNA-templated transcription	involved_in	IEA	InterPro:IPR006897 and InterPro:IPR006899	150520179		InterPro	GO_REF:0000002
HNF1B	Pig	positive regulation of DNA-templated transcription	involved_in	ISS	UniProtKB:P35680	150520179		UniProt	GO_REF:0000024
HNF1B	Pig	positive regulation of gene expression	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	positive regulation of transcription by RNA polymerase II		ISO	Hnf1b (Rattus norvegicus)	9068941		RGD	PMID:12860991 more ...
HNF1B	Pig	positive regulation of transcription by RNA polymerase II	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	positive regulation of transcription initiation by RNA polymerase II	involved_in	IEA	UniProtKB:P35680 and ensembl:ENSP00000480291	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	pronephric nephron tubule development	involved_in	IEA	UniProtKB:P35680 and ensembl:ENSP00000480291	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	pronephros development	involved_in	IEA	UniProtKB:P35680 and ensembl:ENSP00000480291	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	protein-DNA complex assembly		ISO	Hnf1b (Rattus norvegicus)	9068941		RGD	PMID:9545279 and REF_RGD_ID:2312721
HNF1B	Pig	regulation of branch elongation involved in ureteric bud branching	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	regulation of pronephros size	involved_in	IEA	UniProtKB:P35680 and ensembl:ENSP00000480291	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	regulation of transcription by RNA polymerase II	involved_in	IBA	MGI:98504 more ...	150520179		GO_Central	GO_REF:0000033
HNF1B	Pig	regulation of transcription by RNA polymerase II	involved_in	IEA	InterPro:IPR039066	150520179		InterPro	GO_REF:0000002
HNF1B	Pig	regulation of Wnt signaling pathway	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	response to biphenyl		ISO	Hnf1b (Rattus norvegicus)	9068941	PCB Arochlor 1254	RGD	PMID:12051991 and REF_RGD_ID:1599031
HNF1B	Pig	response to carbohydrate		ISO	Hnf1b (Rattus norvegicus)	9068941	DMSO	RGD	PMID:10580588 and REF_RGD_ID:2312720
HNF1B	Pig	response to glucose	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	response to xenobiotic stimulus		ISO	Hnf1b (Rattus norvegicus)	9068941	gentamycin	RGD	PMID:18656965 and REF_RGD_ID:2312717
HNF1B	Pig	system development	involved_in	IEA	ARBA:ARBA00027702	150520179		UniProt	GO_REF:0000117
HNF1B	Pig	ureteric bud elongation	acts_upstream_of_or_within	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HNF1B	Pig	cytosol	located_in	IEA	UniProtKB:P35680 more ...	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	intracellular membrane-bounded organelle	located_in	IEA	UniProtKB:P35680 more ...	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	nucleoplasm	located_in	IEA	UniProtKB:P35680 more ...	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	nucleus	is_active_in	IBA	MGI:98504 more ...	150520179		GO_Central	GO_REF:0000033
HNF1B	Pig	nucleus	located_in	IEA	UniProtKB:P27889 more ...	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	nucleus	located_in	IEA	InterPro:IPR006897 and InterPro:IPR006899	150520179		InterPro	GO_REF:0000002
HNF1B	Pig	nucleus	located_in	ISS	UniProtKB:P35680-1	150520179		UniProt	GO_REF:0000024
HNF1B	Pig	nucleus	located_in	IEA	UniRule:UR000401037	150520179		UniProt	GO_REF:0000104
HNF1B	Pig	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	150520179		UniProt	GO_REF:0000044
HNF1B	Pig	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	150520179		UniProt	GO_REF:0000043
HNF1B	Pig	transcription regulator complex	part_of	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HNF1B	Pig	cis-regulatory region sequence-specific DNA binding		ISO	Hnf1b (Rattus norvegicus)	9068941		RGD	PMID:1673926 and REF_RGD_ID:729944
HNF1B	Pig	cis-regulatory region sequence-specific DNA binding	enables	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	DNA binding	enables	IEA	InterPro:IPR001356 and InterPro:IPR010982	150520179		InterPro	GO_REF:0000002
HNF1B	Pig	DNA binding	enables	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	DNA binding	enables	IEA	UniRule:UR000401037	150520179		UniProt	GO_REF:0000104
HNF1B	Pig	DNA binding	enables	IEA	UniProtKB-KW:KW-0238 and UniProtKB-KW:KW-0371	150520179		UniProt	GO_REF:0000043
HNF1B	Pig	DNA-binding transcription factor activity	enables	IEA	UniProtKB:P27889 more ...	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	DNA-binding transcription factor activity	enables	IEA	ARBA:ARBA00028295	150520179		UniProt	GO_REF:0000117
HNF1B	Pig	DNA-binding transcription factor activity	enables	ISS	UniProtKB:P35680	150520179		UniProt	GO_REF:0000024
HNF1B	Pig	DNA-binding transcription factor activity, RNA polymerase II-specific	enables	IBA	MGI:98505 more ...	150520179		GO_Central	GO_REF:0000033
HNF1B	Pig	DNA-binding transcription factor activity, RNA polymerase II-specific	enables	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	DNA-binding transcription factor activity, RNA polymerase II-specific		ISO	Hnf1b (Rattus norvegicus)	9068941		RGD	PMID:12860991 and REF_RGD_ID:1599302
HNF1B	Pig	identical protein binding		ISO	Hnf1b (Rattus norvegicus)	9068941	homodimerization	RGD	PMID:1673926 and REF_RGD_ID:729944
HNF1B	Pig	identical protein binding	enables	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	promoter-specific chromatin binding	enables	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	protein binding	enables	ISO	UniProtKB:P29674	9068941	PMID:21281489	UniProt	PMID:21281489
HNF1B	Pig	protein binding	enables	ISO	PR:P22361	9068941	PMID:1673925 more ...	MGI	PMID:1673925 more ...
HNF1B	Pig	protein binding	enables	ISO	PR:P45481 and PR:Q9JHD1	9068941	PMID:15647252	MGI	PMID:15647252
HNF1B	Pig	protein binding	enables	ISO	PR:O09106 more ...	9068941	PMID:15509593	MGI	PMID:15509593
HNF1B	Pig	protein binding	enables	ISO	UniProtKB:O43186 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
HNF1B	Pig	protein binding	enables	ISO	UniProtKB:P20823 and UniProtKB:P61457	9068941	PMID:33961781 and PMID:35140242	IntAct	PMID:33961781 and PMID:35140242
HNF1B	Pig	protein binding	enables	ISO	UniProtKB:P61457	9068941	PMID:20211142	IntAct	PMID:20211142
HNF1B	Pig	protein binding	enables	ISO	UniProtKB:P20823-1	9068941	PMID:1677179	UniProt	PMID:1677179
HNF1B	Pig	protein homodimerization activity	enables	ISS	UniProtKB:P35680-1	150520179		UniProt	GO_REF:0000024
HNF1B	Pig	protein-containing complex binding		ISO	Hnf1b (Rattus norvegicus)	9068941		RGD	PMID:9523012 and REF_RGD_ID:2312722
HNF1B	Pig	protein-containing complex binding		ISO	Hnf1b (Rattus norvegicus)	9068941	heterodimerization	RGD	PMID:1673926 and REF_RGD_ID:729944
HNF1B	Pig	RNA polymerase II cis-regulatory region sequence-specific DNA binding	enables	IBA	MGI:98504 and PANTHER:PTN000170751	150520179		GO_Central	GO_REF:0000033
HNF1B	Pig	sequence-specific DNA binding		ISO	Hnf1b (Rattus norvegicus)	9068941		RGD	PMID:12860991 and REF_RGD_ID:1599302
HNF1B	Pig	transcription cis-regulatory region binding	enables	IEA	UniProtKB:P27889 and ensembl:ENSMUSP00000103749	150520179		Ensembl	GO_REF:0000107
HNF1B	Pig	transcription coregulator binding	enables	ISO	UniProtKB:Q13547 more ...	9068941	PMID:15509593	UniProt	PMID:15509593

Imported Annotations - PID (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HNF1B	Pig	forkhead class A signaling pathway		ISO	HNF1B (Homo sapiens)	9068941		PID	PID:200087

PMID:8388098	PMID:22301074	PMID:30032202

HNF1B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	39,143,121 - 39,201,631 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	39,143,119 - 39,201,631 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	40,788,316 - 40,846,557 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HNF1B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	37,686,431 - 37,745,059 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	37,686,431 - 37,745,059 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	36,046,434 - 36,105,050 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	33,120,547 - 33,179,209 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	33,162,728 - 33,179,182	NCBI
Celera	17	32,869,487 - 32,928,989 (-)	NCBI		Celera
Cytogenetic Map	17	q12	ENTREZGENE
HuRef	17	31,984,120 - 32,042,660 (-)	NCBI		HuRef
CHM1_1	17	36,077,994 - 36,136,668 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	38,673,401 - 38,732,032 (-)	NCBI		T2T-CHM13v2.0

Hnf1b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	83,741,035 - 83,796,743 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	83,740,889 - 83,796,645 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	83,850,209 - 83,905,917 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	83,850,063 - 83,905,819 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	83,664,371 - 83,719,317 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	83,667,244 - 83,721,542 (+)	NCBI		MGSCv36	mm8
Celera	11	93,455,173 - 93,510,691 (+)	NCBI		Celera
Cytogenetic Map	11	C	NCBI
cM Map	11	51.23	NCBI

Hnf1b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	69,233,377 - 69,287,360 (+)	NCBI		GRCr8
mRatBN7.2	10	68,735,894 - 68,789,888 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	68,735,894 - 68,789,888 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	73,355,884 - 73,409,885 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	72,860,897 - 72,914,896 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	68,325,325 - 68,379,318 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	71,159,863 - 71,218,902 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	71,159,869 - 71,218,902 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	70,778,492 - 70,829,745 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	72,081,091 - 72,187,014 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	72,095,460 - 72,201,382 (+)	NCBI
Celera	10	67,668,848 - 67,719,403 (+)	NCBI		Celera
Cytogenetic Map	10	q26	NCBI

Hnf1b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955451	320,283 - 371,420 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955451	320,283 - 371,420 (+)	NCBI	ChiLan1.0	ChiLan1.0

HNF1B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	27,010,609 - 27,069,149 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	28,894,053 - 28,952,591 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	19,333,485 - 19,392,147 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	19,633,424 - 19,691,863 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	19,633,424 - 19,691,863 (+)	Ensembl	panpan1.1		panPan2

HNF1B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	37,437,992 - 37,493,200 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	37,438,583 - 37,492,993 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	36,661,511 - 36,717,034 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	38,248,175 - 38,303,484 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	38,248,763 - 38,303,129 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	37,029,129 - 37,084,643 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	37,316,583 - 37,372,144 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	37,403,808 - 37,459,176 (-)	NCBI		UU_Cfam_GSD_1.0

Hnf1b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	36,371,915 - 36,425,499 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936490	649,546 - 702,672 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936490	649,551 - 702,448 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HNF1B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	30,033,486 - 30,097,106 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	30,036,766 - 30,097,088 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	760,378 - 820,920 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Hnf1b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624871	4,661,669 - 4,712,960 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624871	4,662,104 - 4,713,125 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in HNF1B
2423 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	ectoderm	mesenchyme	mesoderm	nervous system	renal system	reproductive system
8	7	7	1	7	3	2


RefSeq Transcripts	NM_213956	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021066204	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021066205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021066206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021066207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK393417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FJ968727	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP312903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP565765	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01117654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X69675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000023424 ⟹ ENSSSCP00000028034

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	39,143,121 - 39,201,601 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000067450 ⟹ ENSSSCP00000069206

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	39,152,497 - 39,201,548 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000072769 ⟹ ENSSSCP00000072148

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	39,188,324 - 39,313,511 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000077806 ⟹ ENSSSCP00000066526

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	39,144,006 - 39,201,601 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000090025 ⟹ ENSSSCP00000072714

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	39,144,006 - 39,201,631 (-)	Ensembl

RefSeq Acc Id:

NM_213956 ⟹ NP_999121

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	39,143,127 - 39,201,329 (-)	NCBI

Sequence:

show sequence

CCGGGACCCCGGGGAGTAACAGGTGTCTGGAGGCTAAAGGGTGGAGGGGGTTCCTGGACTTGGGGTTCGCCTGTGAAACTCCCCTCCACCCTCCTCACCGGCACCCACCCACCCACCCCCTCACCCCC
TTCTTTTTCTGTCCTTGGAAAATGGTGTCCAAGCTCACGTCGCTCCAACAAGAACTCCTGAGCGCCCTGCTGAGCTCCGGGGTCACCAAGGAGGTGCTGGTCCAGGCCTTGGAGGAGTTGCTGCCATC
CCCGAGTTTCGGGGTGAAGCTGGAGACGCTGCCCCTGTCCCCTGGGAGCGGGACTGAGCCGGACACCAAGCCGGTCTTCCACACTCTCACCAACGGCCACGCCAAGGGCCGCTTGTCCGGGGACGAGG
GCTCCGAGGACGGGGACGACTATGACACCCCTCCGATCCTCAAGGAGCTGCAAGCGCTCAACACCGAGGAGGCGGCGGACGACGGGGCGGAGGTGGACCGGATGCTCAGCGAGGACCCTTGGAGGGCT
GCCAAAATGATCAAGGGCTACATGCAGCAGCACAACATCCCCCAGAGGGAGGTGGTCGACGTCACCGGCCTCAACCAGTCCCACCTCTCCCAGCATCTCAACAAGGGCACCCCCATGAAGACCCAGAA
GCGCGCCGCCCTGTACACCTGGTACGTCCGAAAGCAACGGGAGATCCTCCGACAATTCAACCAGACAGTCCAGAGTTCTGGAAATTTGACAGACAAAAGCAGTCAGGATCAGCTGCTGTTTCTCTTTC
CAGAGTTCAGTCAACAGAGCCAGGGGCCTGGGCAGTCCGATGACGCCTGCTCTGAGCCCACCAACAAGAAGATGCGTCGCAACCGGTTCAAATGGGGGCCCGCGTCCCAGCAAATCTTGTACCAGGCC
TACGACCGGCAAAAGAACCCCAGCAAGGAAGAGAGGGAGGCCTTAGTGGAGGAATGCAACAGAGCAGAGTGTTTGCAGCGAGGCGTCTCCCCGTCCAAAGCCCACGGCCTGGGCTCCAACCTGGTCAC
TGAGGTCCGCGTCTACAACTGGTTTGCGAACCGCAGGAAGGAGGAGGAGGCGTTCCGGCAGAAGCTGGCCATGGACGCCTACAGCTCCAACCAGACGCACAGCCTGAACACCCTGCTCTCGCACAGCT
CCCCCCACCACCAGCCCAGCACCTCGCCTCCCAACAAGCTGCCAGGAGTGCGCTACAACCAGCAGGGAAACAATGAGGTCACTTCCTCCTCAACAATCAGTCACCATGGCAACAGTGCCATGGTGACC
AGCCAGTCCGTTTTACAGCAAGTCTCTCCAGCCAGCCTGGACCCGGGCCACAATCTCCTCTCACCTGATGGTAAAATGCAGATCTCAGTCTCAGGAGGAGGTTTGCCCCCCGTCAGCACCTTGACGAA
TATCCACAGCCTGTCCCACCACAATCCTCAGCAATCTCAAAACCTCATCATGACGCCCCTCTCTGGAGTCATGGCCATTGCACAAAGCCTCAACTCCTCCCAAGCTCAGAGTGTCCCTGTCATCAACA
GCGTGGCCGGCAGCCTGGCAGCCCTGCAGCCCGTGCAGTTCTCCCAGCAGCTGCACAGCCCTCACCAGCAGCCCCTCATGCAGCAGAGCCCAGGCAGCCACATGGCCCAGCAGCCCTTCATGGCTGCC
GTGACTCAGCTACAGAACTCACACATGTACACACACAAGCAGGAGCCCCCCCAGTATTCCCACACCTCCCGGTTTCCACCTGCAATGGTGGTCACAGATACCAGCAGCATCAGTACGCTCACCAACAT
GTCTTCCAGTAAACAGTGTCCTCTCCAAGCCTGGTGATGCCCACATGTCACTTACTTGGTGCACAGCAACAAGGACCCTATTTTCCGCACCATCACCCTCCAGGCAGCTGTTGCAGAAAAGCGCAGTG
ACCTGCCAAGCACCTGTGAGGTCCCTGTTCACCTGACATCCTGGCCGGCACCTCGGACAATCCACTCTGAGAGGTGCGGCCGAAGCCCAGCTTCCCTTCTATGCAGTATTGTCACGATGCCTCTCCCA
CGATGTCACGCGCTCCCGTCTGGTCTGTCCTCGAGGCGGGAGGCGACAAACCACGGAAGAGGAAGAGAGAAAGCCGTAGTGTCTACCTTGTGCTCCTTCGACGAACAAACTGATGCGAAAACTTGAAT
CTGTTACTGAAATGAGGAGAGGAGGACACGTGCTATTGAACTGAGCCAAACACACTGTAAACATCAGCCACCTCCCCCCCCTCCCCCATCCCAGCTGATCTGGAGATTTCTTTTAAAGAAGTAAATTT
GTCCAATGGGTGTAAACTATAAACTACTGTAATTAAGTGCAATTTGGGCCCTCCACTTCCTCCTCTGGCCCCTCTGCCCTGTATATAATACTAAAGTGTCTATCAGTTTTCTTTGTAAAGGTCAGAGT
TGAATTTTCAAAGTGATTTGCCTCCTCATCCCCCCTCCCACCCCCCCGGAGAAATATCTAAGGCAGAAGTGAAGCCCTTGCCCGCTTCCTCAGACCTGGACGCACACAGGGACTGTGTATTTTTGGAC
TGACTGCCAGCTCACTCCTCTCTGCTGATGTTAAGGACTGCTCTGGATGTTGAGACATGTTCCCTGGAAGCGCTGCACGTAGTGTCAGAGTAACACCCTAGCTTCCAGTGGAGCTAGGGGATCAGCCA
GCACCGCCCCCACCCCCCAATCCCAGGAAACCCTAAGGCAGGGACCCTGGCTGTTTGATAGTGCAAGAAAAAGTTGCCCTTTCAGGAAACCTCCCATTAAAACAATTTATTTTAAAAAAAAAAAAAAA
AAAAA

hide sequence

RefSeq Acc Id:

XM_021066204 ⟹ XP_020921863

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	39,143,119 - 39,201,601 (-)	NCBI

Sequence:

show sequence

AGCTAAAGTCTGGCTGCTAAACACAACCGGTGCAAGAAGGCCTTCAGCCCCCCGGGGTGAGTAC
AATGGACCCTGGCAGCCCCGCTCCCGGCCGGGTCTCCAGCTCTCCAGGTCTGCCTCTCGGGTTCTCCCTCATTCGGTTTTCCCCCCTCCCCACGCCATTTGCATCTTGCCGAAAGCCAGGCCCTCCCC
ACTAATTTGCATATCTTATATGGCCTAATGGTGGCGATCATGGCAAGTTAGAAGTTTTCTGACTCCTCTCGGAGGAGACTCCGGGACCCCGGGGAGTAACAGGTGTCTGGAGGCTAAAGGGTGGAGGG
GGTTCCTGGACTTGGGGTTCGCCTGTGAAACTCCCCTCCACCCTCCTCACCGGCACCCACCCACCCACCCCCTCACCCCCTTCTTTTTCTGTCCTTGGAAAATGGTGTCCAAGCTCACGTCGCTCCAA
CAAGAACTCCTGAGCGCCCTGCTGAGCTCCGGGGTCACCAAGGAGGTGCTGGTCCAGGCCTTGGAGGAGTTGCTGCCATCCCCGAGTTTCGGGGTGAAGCTGGAGACGCTGCCCCTGTCCCCTGGGAG
CGGGACTGAGCCGGACACCAAGCCGGTCTTCCACACTCTCACCAACGGCCACGCCAAGGGCCGCTTGTCCGGGGACGAGGGCTCCGAGGACGGGGACGACTATGACACCCCTCCGATCCTCAAGGAGC
TGCAAGCGCTCAACACCGAGGAGGCGGCGGAGCAGCGGGCGGAGGTGGACCGGATGCTCAGCGAGGACCCTTGGAGGGCTGCCAAAATGATCAAGGGCTACATGCAGCAGCACAACATCCCCCAGAGG
GAGGTGGTCGACGTCACCGGCCTCAACCAGTCCCACCTCTCCCAGCATCTCAACAAGGGCACCCCCATGAAGACCCAGAAGCGCGCCGCCCTGTACACCTGGTACGTCCGAAAGCAACGGGAGATCCT
CCGACAATTCAACCAGACAGTCCAGAGTTCTGGAAATTTGACAGACAAAAGCAGTCAGGATCAGCTGCTGTTTCTCTTTCCAGAGTTCAGTCAACAGAGCCAGGGGCCTGGGCAGTCCGATGACGCCT
GCTCTGAGCCCACCAACAAGAAGATGCGTCGCAACCGGTTCAAATGGGGGCCCGCGTCCCAGCAAATCTTGTACCAGGCCTACGACCGGCAAAAGAACCCCAGCAAGGAAGAGAGGGAGGCCTTAGTG
GAGGAATGCAACAGAGCAGAGTGTTTGCAGCGAGGCGTCTCCCCGTCCAAAGCCCACGGCCTGGGCTCCAACCTGGTCACTGAGGTCCGCGTCTACAACTGGTTTGCGAACCGCAGGAAGGAGGAGGC
GTTCCGGCAGAAGCTGGCCATGGACGCCTACAGCTCCAACCAGACGCACAGCCTGAACACCCTGCTCTCGCACAGCTCCCCCCACCACCAGCCCAGCACCTCGCCTCCCAACAAGCTGCCAGGAGTGC
GCTACAACCAGCAGGGAAACAATGAGGTCACTTCCTCCTCAACAATCAGTCACCATGGCAACAGTGCCATGGTGACCAGCCAGTCCGTTTTACAGCAAGTCTCTCCAGCCAGCCTGGACCCGGGCCAC
AATCTCCTCTCACCTGATGGTAAAATGATCTCAGTCTCAGGAGGAGGTTTGCCCCCCGTCAGCACCTTGACGAATATCCACAGCCTGTCCCACCACAATCCTCAGCAATCTCAAAACCTCATCATGAC
GCCCCTCTCTGGAGTCATGGCCATTGCACAAAGCCTCAACTCCTCCCAAGCTCAGAGTGTCCCTGTCATCAACAGCGTGGCCGGCAGCCTGGCAGCCCTGCAGCCCGTCCAGTTCTCCCAGCAGCTGC
ACAGCCCTCACCAGCAGCCCCTCATGCAGCAGAGCCCAGGCAGCCACATGGCCCAGCAGCCCTTCATGGCTGCCGTGACTCAGCTACAGAACTCACACATGTACACACACAAGCAGGAGCCCCCCCAG
TATTCCCACACCTCCCGGTTTCCACCTGCAATGGTGGTCACAGATACCAGCAGCATCAGTACGCTCACCAACATGTCTTCCAGTAAACAGTGTCCTCTCCAAGCCTGGTGATGCCCACATGTCACTTA
CTTGGTGCACAGCAACAAGGACCCTATTTTCCGCACCATCACCCTCCAGGCAGCTGTTGCAGAAAAGCGCAGTGACCTGCCAAGCACCTGTGAGAGGTCCCTGTTCACCTGACATCCTGCCGGCACCT
CGGACAATCCACTCTGAGAGGTGCGGCCGAAGCCCAGCTTCCCTTCTATGCAGTATTGTCACGATGCCTCTCCCACGATGTCACGCGCTCCCGTCTGGTCTGTCCTCGAGGCGGGAGGCGACAAACCA
CGGAAGAGGAAGAGAGAAAGCCGTAGTGTCTACCTTGTGCTCCTTCGACGAACAAACTGATGCGAAAACTTGAATCTGTTACTGAAATGAGGAGAGGAGGACACGTGCTATTGAACTGAGCCAAACAC
ACTGTAAATATCAGCCACCTCCCCCCCCTCCCCCATCCCAGCTGATCTGGAGATTTCTTTTAAAGAAGTAAATTTGTCCAATGGGTGTAAACTATAAACTACTGTAATTAAGTGCAATTTCCCCTCCA
CTTCCTCCTCTCCCCTCTGCCCTGTATATAATACTAAAGTGTCTATCAGTTTTCTTTGTAAAGGTCAGAGTTGAATTTTCAAAGTGATTTGCCTCCTCATCCCCCCTCCCACCCCCCCGGAGAAATAT
CTAAGGCAGAAGTGAAGCCCTTGCCCGCTTCCTCAGACCTGGACGCACACAGGGACTGTGTATTTTTGGACTGACTGCCAGCTCACTCCTCTCTCCTGATGTTAAGGCATGCCTCTGGATGTTGAGAC
ATGTTCCCTGGAAGCGCTGCACGTAGTGTCAGAGTAACACCCTAGCTTCCAGTGGAGCTAGGGGATCAGCCAGCACCGCCCCCACCCCCCAATCCCAGGAAACCCTAAGGCAGGGACCCTGGCTGTTT
GATAGTGCAAGAAAAAGTTGCCCTTTCAGGAAACCTCCCATTAAAACAATTTATTTTATCACTGCC

hide sequence

RefSeq Acc Id:

XM_021066205 ⟹ XP_020921864

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	39,143,119 - 39,201,390 (-)	NCBI

Sequence:

show sequence

ATGGCCTAATGGTGGCGATCATGGCAAGTTAGAAGTTTTCTGACTCCTCTCGGAGGAGACTCCGGGACCCCGGGGAGTAACAGGTGTCTGGAGGCTAAAGGGTGGAGGGGGTTCCTGGACTTGGGGTT
CGCCTGTGAAACTCCCCTCCACCCTCCTCACCGGCACCCACCCACCCACCCCCTCACCCCCTTCTTTTTCTGTCCTTGGAAAATGGTGTCCAAGCTCACGTCGCTCCAACAAGAACTCCTGAGCGCCC
TGCTGAGCTCCGGGGTCACCAAGGAGGTGCTGGTCCAGGCCTTGGAGGAGTTGCTGCCATCCCCGAGTTTCGGGGTGAAGCTGGAGACGCTGCCCCTGTCCCCTGGGAGCGGGACTGAGCCGGACACC
AAGCCGGTCTTCCACACTCTCACCAACGGCCACGCCAAGGGCCGCTTGTCCGGGGACGAGGGCTCCGAGGACGGGGACGACTATGACACCCCTCCGATCCTCAAGGAGCTGCAAGCGCTCAACACCGA
GGAGGCGGCGGAGCAGCGGGCGGAGGTGGACCGGATGCTCAGCGAGGACCCTTGGAGGGCTGCCAAAATGATCAAGGGCTACATGCAGCAGCACAACATCCCCCAGAGGGAGGTGGTCGACGTCACCG
GCCTCAACCAGTCCCACCTCTCCCAGCATCTCAACAAGGGCACCCCCATGAAGACCCAGAAGCGCGCCGCCCTGTACACCTGGTACGTCCGAAAGCAACGGGAGATCCTCCGACAGTTCAGTCAACAG
AGCCAGGGGCCTGGGCAGTCCGATGACGCCTGCTCTGAGCCCACCAACAAGAAGATGCGTCGCAACCGGTTCAAATGGGGGCCCGCGTCCCAGCAAATCTTGTACCAGGCCTACGACCGGCAAAAGAA
CCCCAGCAAGGAAGAGAGGGAGGCCTTAGTGGAGGAATGCAACAGAGCAGAGTGTTTGCAGCGAGGCGTCTCCCCGTCCAAAGCCCACGGCCTGGGCTCCAACCTGGTCACTGAGGTCCGCGTCTACA
ACTGGTTTGCGAACCGCAGGAAGGAGGAGGCGTTCCGGCAGAAGCTGGCCATGGACGCCTACAGCTCCAACCAGACGCACAGCCTGAACACCCTGCTCTCGCACAGCTCCCCCCACCACCAGCCCAGC
ACCTCGCCTCCCAACAAGCTGCCAGGAGTGCGCTACAACCAGCAGGGAAACAATGAGGTCACTTCCTCCTCAACAATCAGTCACCATGGCAACAGTGCCATGGTGACCAGCCAGTCCGTTTTACAGCA
AGTCTCTCCAGCCAGCCTGGACCCGGGCCACAATCTCCTCTCACCTGATGGTAAAATGCAGATCTCAGTCTCAGGAGGAGGTTTGCCCCCCGTCAGCACCTTGACGAATATCCACAGCCTGTCCCACC
ACAATCCTCAGCAATCTCAAAACCTCATCATGACGCCCCTCTCTGGAGTCATGGCCATTGCACAAAGCCTCAACTCCTCCCAAGCTCAGAGTGTCCCTGTCATCAACAGCGTGGCCGGCAGCCTGGCA
GCCCTGCAGCCCGTCCAGTTCTCCCAGCAGCTGCACAGCCCTCACCAGCAGCCCCTCATGCAGCAGAGCCCAGGCAGCCACATGGCCCAGCAGCCCTTCATGGCTGCCGTGACTCAGCTACAGAACTC
ACACATGTACACACACAAGCAGGAGCCCCCCCAGTATTCCCACACCTCCCGGTTTCCACCTGCAATGGTGGTCACAGATACCAGCAGCATCAGTACGCTCACCAACATGTCTTCCAGTAAACAGTGTC
CTCTCCAAGCCTGGTGATGCCCACATGTCACTTACTTGGTGCACAGCAACAAGGACCCTATTTTCCGCACCATCACCCTCCAGGCAGCTGTTGCAGAAAAGCGCAGTGACCTGCCAAGCACCTGTGAG
AGGTCCCTGTTCACCTGACATCCTGCCGGCACCTCGGACAATCCACTCTGAGAGGTGCGGCCGAAGCCCAGCTTCCCTTCTATGCAGTATTGTCACGATGCCTCTCCCACGATGTCACGCGCTCCCGT
CTGGTCTGTCCTCGAGGCGGGAGGCGACAAACCACGGAAGAGGAAGAGAGAAAGCCGTAGTGTCTACCTTGTGCTCCTTCGACGAACAAACTGATGCGAAAACTTGAATCTGTTACTGAAATGAGGAG
AGGAGGACACGTGCTATTGAACTGAGCCAAACACACTGTAAATATCAGCCACCTCCCCCCCCTCCCCCATCCCAGCTGATCTGGAGATTTCTTTTAAAGAAGTAAATTTGTCCAATGGGTGTAAACTA
TAAACTACTGTAATTAAGTGCAATTTCCCCTCCACTTCCTCCTCTCCCCTCTGCCCTGTATATAATACTAAAGTGTCTATCAGTTTTCTTTGTAAAGGTCAGAGTTGAATTTTCAAAGTGATTTGCCT
CCTCATCCCCCCTCCCACCCCCCCGGAGAAATATCTAAGGCAGAAGTGAAGCCCTTGCCCGCTTCCTCAGACCTGGACGCACACAGGGACTGTGTATTTTTGGACTGACTGCCAGCTCACTCCTCTCT
CCTGATGTTAAGGCATGCCTCTGGATGTTGAGACATGTTCCCTGGAAGCGCTGCACGTAGTGTCAGAGTAACACCCTAGCTTCCAGTGGAGCTAGGGGATCAGCCAGCACCGCCCCCACCCCCCAATC
CCAGGAAACCCTAAGGCAGGGACCCTGGCTGTTTGATAGTGCAAGAAAAAGTTGCCCTTTCAGGAAACCTCCCATTAAAACAATTTATTTTATCACTGCC

hide sequence

RefSeq Acc Id:

XM_021066206 ⟹ XP_020921865

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	39,143,119 - 39,201,631 (-)	NCBI

Sequence:

show sequence

CAAACGACTTGTTTAACAAGTCCAAAGTTCAGCTAAAGTCTGGCTGCTAAACACAACCGGTGCAAGAAGGCCTTCAGCCCCCCGGGGTGAGTACAATGGACCCTGGCAGCCCCGCTCCCGGCCGGGTC
TCCAGCTCTCCAGGTCTGCCTCTCGGGTTCTCCCTCATTCGGTTTTCCCCCCTCCCCACGCCATTTGCATCTTGCCGAAAGCCAGGCCCTCCCCACTAATTTGCATATCTTATATGGCCTAATGGTGG
CGATCATGGCAAGTTAGAAGTTTTCTGACTCCTCTCGGAGGAGACTCCGGGACCCCGGGGAGTAACAGGTGTCTGGAGGCTAAAGGGTGGAGGGGGTTCCTGGACTTGGGGTTCGCCTGTGAAACTCC
CCTCCACCCTCCTCACCGGCACCCACCCACCCACCCCCTCACCCCCTTCTTTTTCTGTCCTTGGAAAATGGTGTCCAAGCTCACGTCGCTCCAACAAGAACTCCTGAGCGCCCTGCTGAGCTCCGGGG
TCACCAAGGAGGTGCTGGTCCAGGCCTTGGAGGAGTTGCTGCCATCCCCGAGTTTCGGGGTGAAGCTGGAGACGCTGCCCCTGTCCCCTGGGAGCGGGACTGAGCCGGACACCAAGCCGGTCTTCCAC
ACTCTCACCAACGGCCACGCCAAGGGCCGCTTGTCCGGGGACGAGGGCTCCGAGGACGGGGACGACTATGACACCCCTCCGATCCTCAAGGAGCTGCAAGCGCTCAACACCGAGGAGGCGGCGGAGCA
GCGGGCGGAGGTGGACCGGATGCTCAGCGAGGACCCTTGGAGGGCTGCCAAAATGATCAAGGGCTACATGCAGCAGCACAACATCCCCCAGAGGGAGGTGGTCGACGTCACCGGCCTCAACCAGTCCC
ACCTCTCCCAGCATCTCAACAAGGGCACCCCCATGAAGACCCAGAAGCGCGCCGCCCTGTACACCTGGTACGTCCGAAAGCAACGGGAGATCCTCCGACAGTTCAGTCAACAGAGCCAGGGGCCTGGG
CAGTCCGATGACGCCTGCTCTGAGCCCACCAACAAGAAGATGCGTCGCAACCGGTTCAAATGGGGGCCCGCGTCCCAGCAAATCTTGTACCAGGCCTACGACCGGCAAAAGAACCCCAGCAAGGAAGA
GAGGGAGGCCTTAGTGGAGGAATGCAACAGAGCAGAGTGTTTGCAGCGAGGCGTCTCCCCGTCCAAAGCCCACGGCCTGGGCTCCAACCTGGTCACTGAGGTCCGCGTCTACAACTGGTTTGCGAACC
GCAGGAAGGAGGAGGCGTTCCGGCAGAAGCTGGCCATGGACGCCTACAGCTCCAACCAGACGCACAGCCTGAACACCCTGCTCTCGCACAGCTCCCCCCACCACCAGCCCAGCACCTCGCCTCCCAAC
AAGCTGCCAGGAGTGCGCTACAACCAGCAGGGAAACAATGAGGTCACTTCCTCCTCAACAATCAGTCACCATGGCAACAGTGCCATGGTGACCAGCCAGTCCGTTTTACAGCAAGTCTCTCCAGCCAG
CCTGGACCCGGGCCACAATCTCCTCTCACCTGATGGTAAAATGATCTCAGTCTCAGGAGGAGGTTTGCCCCCCGTCAGCACCTTGACGAATATCCACAGCCTGTCCCACCACAATCCTCAGCAATCTC
AAAACCTCATCATGACGCCCCTCTCTGGAGTCATGGCCATTGCACAAAGCCTCAACTCCTCCCAAGCTCAGAGTGTCCCTGTCATCAACAGCGTGGCCGGCAGCCTGGCAGCCCTGCAGCCCGTCCAG
TTCTCCCAGCAGCTGCACAGCCCTCACCAGCAGCCCCTCATGCAGCAGAGCCCAGGCAGCCACATGGCCCAGCAGCCCTTCATGGCTGCCGTGACTCAGCTACAGAACTCACACATGTACACACACAA
GCAGGAGCCCCCCCAGTATTCCCACACCTCCCGGTTTCCACCTGCAATGGTGGTCACAGATACCAGCAGCATCAGTACGCTCACCAACATGTCTTCCAGTAAACAGTGTCCTCTCCAAGCCTGGTGAT
GCCCACATGTCACTTACTTGGTGCACAGCAACAAGGACCCTATTTTCCGCACCATCACCCTCCAGGCAGCTGTTGCAGAAAAGCGCAGTGACCTGCCAAGCACCTGTGAGAGGTCCCTGTTCACCTGA
CATCCTGCCGGCACCTCGGACAATCCACTCTGAGAGGTGCGGCCGAAGCCCAGCTTCCCTTCTATGCAGTATTGTCACGATGCCTCTCCCACGATGTCACGCGCTCCCGTCTGGTCTGTCCTCGAGGC
GGGAGGCGACAAACCACGGAAGAGGAAGAGAGAAAGCCGTAGTGTCTACCTTGTGCTCCTTCGACGAACAAACTGATGCGAAAACTTGAATCTGTTACTGAAATGAGGAGAGGAGGACACGTGCTATT
GAACTGAGCCAAACACACTGTAAATATCAGCCACCTCCCCCCCCTCCCCCATCCCAGCTGATCTGGAGATTTCTTTTAAAGAAGTAAATTTGTCCAATGGGTGTAAACTATAAACTACTGTAATTAAG
TGCAATTTCCCCTCCACTTCCTCCTCTCCCCTCTGCCCTGTATATAATACTAAAGTGTCTATCAGTTTTCTTTGTAAAGGTCAGAGTTGAATTTTCAAAGTGATTTGCCTCCTCATCCCCCCTCCCAC
CCCCCCGGAGAAATATCTAAGGCAGAAGTGAAGCCCTTGCCCGCTTCCTCAGACCTGGACGCACACAGGGACTGTGTATTTTTGGACTGACTGCCAGCTCACTCCTCTCTCCTGATGTTAAGGCATGC
CTCTGGATGTTGAGACATGTTCCCTGGAAGCGCTGCACGTAGTGTCAGAGTAACACCCTAGCTTCCAGTGGAGCTAGGGGATCAGCCAGCACCGCCCCCACCCCCCAATCCCAGGAAACCCTAAGGCA
GGGACCCTGGCTGTTTGATAGTGCAAGAAAAAGTTGCCCTTTCAGGAAACCTCCCATTAAAACAATTTATTTTATCACTGCC

hide sequence

RefSeq Acc Id:

XM_021066207 ⟹ XP_020921866

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	39,143,119 - 39,201,390 (-)	NCBI

Sequence:

show sequence

ATGGCCTAATGGTGGCGATCATGGCAAGTTAGAAGTTTTCTGACTCCTCTCGGAGGAGACTCCGGGACCCCGGGGAGTAACAGGTGTCTGGAGGCTAAAGGGTGGAGGGGGTTCCTGGACTTGGGGTT
CGCCTGTGAAACTCCCCTCCACCCTCCTCACCGGCACCCACCCACCCACCCCCTCACCCCCTTCTTTTTCTGTCCTTGGAAAATGGTGTCCAAGCTCACGTCGCTCCAACAAGAACTCCTGAGCGCCC
TGCTGAGCTCCGGGGTCACCAAGGAGGTGCTGGTCCAGGCCTTGGAGGAGTTGCTGCCATCCCCGAGTTTCGGGGTGAAGCTGGAGACGCTGCCCCTGTCCCCTGGGAGCGGGACTGAGCCGGACACC
AAGCCGGTCTTCCACACTCTCACCAACGGCCACGCCAAGGGCCGCTTGTCCGGGGACGAGGGCTCCGAGGACGGGGACGACTATGACACCCCTCCGATCCTCAAGGAGCTGCAAGCGCTCAACACCGA
GGAGGCGGCGGAGCAGCGGGCGGAGGTGGACCGGATGCTCAGCGAGGACCCTTGGAGGGCTGCCAAAATGATCAAGGGCTACATGCAGCAGCACAACATCCCCCAGAGGGAGGTGGTCGACGTCACCG
GCCTCAACCAGTCCCACCTCTCCCAGCATCTCAACAAGGGCACCCCCATGAAGACCCAGAAGCGCGCCGCCCTGTACACCTGGTACGTCCGAAAGCAACGGGAGATCCTCCGACAGTTCAGTCAACAG
AGCCAGGGGCCTGGGCAGTCCGATGACGCCTGCTCTGAGCCCACCAACAAGAAGATGCGTCGCAACCGGTTCAAATGGGGGCCCGCGTCCCAGCAAATCTTGTACCAGGCCTACGACCGGCAAAAGAA
CCCCAGCAAGGAAGAGAGGGAGGCCTTAGTGGAGGAATGCAACAGAGCAGAGTGTTTGCAGCGAGGCGTCTCCCCGTCCAAAGCCCACGGCCTGGGCTCCAACCTGGTCACTGAGGTCCGCGTCTACA
ACTGGTTTGCGAACCGCAGGAAGGAGGAGGCGTTCCGGCAGAAGCTGGCCATGGACGCCTACAGCTCCAACCAGACGCACAGCCTGAACACCCTGCTCTCGCACAGCTCCCCCCACCACCAGCCCAGC
ACCTCGCCTCCCAACAAGCTGCCAGGAGTGCGCTACAACCAGCAGGGAAACAATGAGGTCACTTCCTCCTCAACAATCAGTCACCATGGCAACAGTGCCATGGTGACCAGCCAGTCCGTTTTACAGCA
AGTCTCTCCAGCCAGCCTGGACCCGGGCCACAATCTCCTCTCACCTGATGGTAAAATGATCTCAGTCTCAGGAGGAGGTTTGCCCCCCGTCAGCACCTTGACGAATATCCACAGCCTGTCCCACCACA
ATCCTCAGCAATCTCAAAACCTCATCATGACGCCCCTCTCTGGAGTCATGGCCATTGCACAAATGTCCTCTCCAAGCCTGGTGATGCCCACATGTCACTTACTTGGTGCACAGCAACAAGGACCCTAT
TTTCCGCACCATCACCCTCCAGGCAGCTGTTGCAGAAAAGCGCAGTGACCTGCCAAGCACCTGTGAGAGGTCCCTGTTCACCTGACATCCTGCCGGCACCTCGGACAATCCACTCTGAGAGGTGCGGC
CGAAGCCCAGCTTCCCTTCTATGCAGTATTGTCACGATGCCTCTCCCACGATGTCACGCGCTCCCGTCTGGTCTGTCCTCGAGGCGGGAGGCGACAAACCACGGAAGAGGAAGAGAGAAAGCCGTAGT
GTCTACCTTGTGCTCCTTCGACGAACAAACTGATGCGAAAACTTGAATCTGTTACTGAAATGAGGAGAGGAGGACACGTGCTATTGAACTGAGCCAAACACACTGTAAATATCAGCCACCTCCCCCCC
CTCCCCCATCCCAGCTGATCTGGAGATTTCTTTTAAAGAAGTAAATTTGTCCAATGGGTGTAAACTATAAACTACTGTAATTAAGTGCAATTTCCCCTCCACTTCCTCCTCTCCCCTCTGCCCTGTAT
ATAATACTAAAGTGTCTATCAGTTTTCTTTGTAAAGGTCAGAGTTGAATTTTCAAAGTGATTTGCCTCCTCATCCCCCCTCCCACCCCCCCGGAGAAATATCTAAGGCAGAAGTGAAGCCCTTGCCCG
CTTCCTCAGACCTGGACGCACACAGGGACTGTGTATTTTTGGACTGACTGCCAGCTCACTCCTCTCTCCTGATGTTAAGGCATGCCTCTGGATGTTGAGACATGTTCCCTGGAAGCGCTGCACGTAGT
GTCAGAGTAACACCCTAGCTTCCAGTGGAGCTAGGGGATCAGCCAGCACCGCCCCCACCCCCCAATCCCAGGAAACCCTAAGGCAGGGACCCTGGCTGTTTGATAGTGCAAGAAAAAGTTGCCCTTTC
AGGAAACCTCCCATTAAAACAATTTATTTTATCACTGCC

hide sequence


Protein RefSeqs	NP_999121	(Get FASTA)	NCBI Sequence Viewer
	XP_020921863	(Get FASTA)	NCBI Sequence Viewer
	XP_020921864	(Get FASTA)	NCBI Sequence Viewer
	XP_020921865	(Get FASTA)	NCBI Sequence Viewer
	XP_020921866	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	ACS88191	(Get FASTA)	NCBI Sequence Viewer
	CAA49356	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000028034
	ENSSSCP00000069206
	ENSSSCP00000072714
GenBank Protein	Q03365	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_020921865 ⟸ XM_021066206
- Peptide Label:	isoform X3
- UniProtKB:	A0A8D1CA49 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPSFGVKLETLPLSPGSGTEPDTKPVFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEEAAEQRAEVDRMLSEDPWRAAKMIKGY MQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILRQFSQQSQGPGQSDDACSEPTNKKMRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSK AHGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSSNQTHSLNTLLSHSSPHHQPSTSPPNKLPGVRYNQQGNNEVTSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHNLLSPDGKMISVSGGGL PPVSTLTNIHSLSHHNPQQSQNLIMTPLSGVMAIAQSLNSSQAQSVPVINSVAGSLAALQPVQFSQQLHSPHQQPLMQQSPGSHMAQQPFMAAVTQLQNSHMYTHKQEPPQYSHTSRFPPAMVVTDTS SISTLTNMSSSKQCPLQAW hide sequence

RefSeq Acc Id:	XP_020921863 ⟸ XM_021066204
- Peptide Label:	isoform X1
- UniProtKB:	I3LV82 (UniProtKB/TrEMBL), A0A4X1T5E6 (UniProtKB/TrEMBL), A0A8D1CA49 (UniProtKB/TrEMBL), A0A8D0ND60 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPSFGVKLETLPLSPGSGTEPDTKPVFHT LTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEEAAEQRAEVDRMLSEDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILRQFNQTVQSSGN LTDKSSQDQLLFLFPEFSQQSQGPGQSDDACSEPTNKKMRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSS NQTHSLNTLLSHSSPHHQPSTSPPNKLPGVRYNQQGNNEVTSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHNLLSPDGKMISVSGGGLPPVSTLTNIHSLSHHNPQQSQNLIMTPLSGVMAIAQSL NSSQAQSVPVINSVAGSLAALQPVQFSQQLHSPHQQPLMQQSPGSHMAQQPFMAAVTQLQNSHMYTHKQEPPQYSHTSRFPPAMVVTDTSSISTLTNMSSSKQCPLQAW hide sequence

RefSeq Acc Id:	XP_020921866 ⟸ XM_021066207
- Peptide Label:	isoform X4
- UniProtKB:	A0A4X1T4P3 (UniProtKB/TrEMBL), A0A5G2R6K9 (UniProtKB/TrEMBL), A0A8D1C9X0 (UniProtKB/TrEMBL), A0A8D1H054 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPSFGVKLETLPLSPGSGTEPDTKPVFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEEAAEQRAEVDRMLSEDPWRAAKMIKGY MQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILRQFSQQSQGPGQSDDACSEPTNKKMRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSK AHGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSSNQTHSLNTLLSHSSPHHQPSTSPPNKLPGVRYNQQGNNEVTSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHNLLSPDGKMISVSGGGL PPVSTLTNIHSLSHHNPQQSQNLIMTPLSGVMAIAQMSSPSLVMPTCHLLGAQQQGPYFPHHHPPGSCCRKAQ hide sequence

RefSeq Acc Id:	XP_020921864 ⟸ XM_021066205
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1CA49 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPSFGVKLETLPLSPGSGTEPDTKPVFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEEAAEQRAEVDRMLSEDPWRAAKMIKGY MQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILRQFSQQSQGPGQSDDACSEPTNKKMRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSK AHGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSSNQTHSLNTLLSHSSPHHQPSTSPPNKLPGVRYNQQGNNEVTSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHNLLSPDGKMQISVSGGG LPPVSTLTNIHSLSHHNPQQSQNLIMTPLSGVMAIAQSLNSSQAQSVPVINSVAGSLAALQPVQFSQQLHSPHQQPLMQQSPGSHMAQQPFMAAVTQLQNSHMYTHKQEPPQYSHTSRFPPAMVVTDT SSISTLTNMSSSKQCPLQAW hide sequence

RefSeq Acc Id:

NP_999121 ⟸ NM_213956

- UniProtKB:

Q03365 (UniProtKB/Swiss-Prot), A0A8D1CA49 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPSFGVKLETLPLSPGSGTEPDTKPVFHT
LTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEEAADDGAEVDRMLSEDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILRQFNQTVQSSGN
LTDKSSQDQLLFLFPEFSQQSQGPGQSDDACSEPTNKKMRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWFANRRKEEEAFRQKLAMDAYS
SNQTHSLNTLLSHSSPHHQPSTSPPNKLPGVRYNQQGNNEVTSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHNLLSPDGKMQISVSGGGLPPVSTLTNIHSLSHHNPQQSQNLIMTPLSGVMAIAQ
SLNSSQAQSVPVINSVAGSLAALQPVQFSQQLHSPHQQPLMQQSPGSHMAQQPFMAAVTQLQNSHMYTHKQEPPQYSHTSRFPPAMVVTDTSSISTLTNMSSSKQCPLQAW

hide sequence

Protein Domains

HNF-p1 Homeobox POU-specific atypical

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000022417	Ensembl, ENTREZGENE
Ensembl Transcript	ENSSSCT00000023424	ENTREZGENE
	ENSSSCT00000067450	ENTREZGENE
	ENSSSCT00000090025	ENTREZGENE
Gene3D-CATH	1.10.260.40	UniProtKB/Swiss-Prot
	Homeodomain-like	UniProtKB/Swiss-Prot
InterPro	HNF-1	UniProtKB/Swiss-Prot
	HNF-1_N	UniProtKB/Swiss-Prot
	HNF-1_POU	UniProtKB/Swiss-Prot
	HNF1_dimer_N_dom_sf	UniProtKB/Swiss-Prot
	HNF1b_C	UniProtKB/Swiss-Prot
	HNF_P1	UniProtKB/Swiss-Prot
	Homeobox-like_sf	UniProtKB/Swiss-Prot
	Homeobox_dom	UniProtKB/Swiss-Prot
	Lambda_DNA-bd_dom_sf	UniProtKB/Swiss-Prot
KEGG Report	ssc:397002	UniProtKB/Swiss-Prot
NCBI Gene	HNF1B	ENTREZGENE
PANTHER	HEPATOCYTE NUCLEAR FACTOR 1-BETA	UniProtKB/Swiss-Prot
	PTHR11568	UniProtKB/Swiss-Prot
Pfam	HNF-1_N	UniProtKB/Swiss-Prot
	HNF-1B_C	UniProtKB/Swiss-Prot
PROSITE	HNF_P1	UniProtKB/Swiss-Prot
	HOMEOBOX_2	UniProtKB/Swiss-Prot
	POU_4	UniProtKB/Swiss-Prot
SMART	HOX	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF100957	UniProtKB/Swiss-Prot
	SSF46689	UniProtKB/Swiss-Prot
	SSF47413	UniProtKB/Swiss-Prot
UniProt	A0A4X1T4P3	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1T5E6	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1T5F5_PIG	UniProtKB/TrEMBL
	A0A5G2QWH0_PIG	UniProtKB/TrEMBL
	A0A5G2R6K9	ENTREZGENE
	A0A8D0LPH0_PIG	UniProtKB/TrEMBL
	A0A8D0N8R2_PIG	UniProtKB/TrEMBL
	A0A8D0ND60	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0X4I5_PIG	UniProtKB/TrEMBL
	A0A8D0X4J7_PIG	UniProtKB/TrEMBL
	A0A8D1C9X0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1CA49	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1GXC1_PIG	UniProtKB/TrEMBL
	A0A8D1H054	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1NZW3_PIG	UniProtKB/TrEMBL
	A0A8D1S0K7_PIG	UniProtKB/TrEMBL
	C6GIK9_PIG	UniProtKB/TrEMBL
	HNF1B_PIG	UniProtKB/Swiss-Prot
	I3LV82	ENTREZGENE
	Q03365	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)