HSD11B1 (hydroxysteroid 11-beta dehydrogenase 1) - Rat Genome Database

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Gene: HSD11B1 (hydroxysteroid 11-beta dehydrogenase 1) Sus scrofa
Analyze
Symbol: HSD11B1
Name: hydroxysteroid 11-beta dehydrogenase 1
RGD ID: 13915790
Description: ENCODES a protein that exhibits NADP binding (ortholog); steroid binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); glucocorticoid biosynthetic process (ortholog); glucocorticoid catabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH Abdominal Obesity (ortholog); allergic contact dermatitis (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN apical part of cell (ortholog); nuclear membrane (ortholog); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 11-beta hydroxysteroid dehydrogenase; 11-beta-hydroxysteroid dehydrogenase 1; corticosteroid 11-beta-dehydrogenase isozyme 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9133,231,451 - 133,278,396 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19133,231,451 - 133,278,396 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 21 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
HSD11B1Pigcoronary artery disease sexual_dimorphismISORGD:7370919068941associated with obesity;mRNA,protein:increased expression:multiple (human)RGDPMID:23009206|REF_RGD_ID:329901914
HSD11B1Pigcortisone reductase deficiency  ISORGD:7370919068941DNA:insertion,transversion:intron:86557insA, 83597T>G (human)RGDPMID:12858176|REF_RGD_ID:1625067
HSD11B1PigDiabetic Nephropathies susceptibilityISORGD:7370919068941DNA:SNO:intron: (rs17389016, rs11799643) (human)RGDPMID:32453474|REF_RGD_ID:329902062
HSD11B1Pigessential hypertension susceptibilityISORGD:7370919068941DNA:SNP:insertion: ins4436A (rs45487298) (human)RGDPMID:26671915|REF_RGD_ID:11353457
HSD11B1Pigfamilial hyperlipidemia  ISORGD:28349068941mRNA,protein:increased expression:islet cells:diabetic but not prediabetic Zucker Diabetic Fatty (fa/fa) ratsRGDPMID:14697232|REF_RGD_ID:1625074
HSD11B1Pighypertension susceptibilityISORGD:7370919068941DNA:SNP:5'utr: (rs846910) (human)RGDPMID:15452033|REF_RGD_ID:329902060
HSD11B1PigLeft Ventricular Hypertrophy susceptibilityISORGD:7370919068941DNA:SNP:5'utr: (rs846910) (human)RGDPMID:21402901|REF_RGD_ID:329901915
HSD11B1PigMetabolic Syndrome  ISORGD:28349068941 RGDPMID:14697232|REF_RGD_ID:1625074
HSD11B1PigMetabolic Syndrome susceptibilityISORGD:7370919068941DNA:SNP: (rs12086634)T>G (human)RGDPMID:23869418|REF_RGD_ID:329901929
HSD11B1PigMetabolic Syndrome susceptibilityISORGD:7370919068941DNA:SNP:: (rs846910) (human)RGDPMID:28750217|REF_RGD_ID:329901909
HSD11B1PigMetabolic Syndrome disease_progressionISORGD:7370919068941mRNA:increased expression:ascending aorta,epicardial fat (human)RGDPMID:23007990|REF_RGD_ID:329901930
HSD11B1PigMetabolic Syndrome susceptibilityISORGD:7370919068941DNA:SNPs:5'utr,enhancer: (rs846910,rs12086634) (human)RGDPMID:21622477|REF_RGD_ID:329901919
HSD11B1Pigmyocardial infarction  ISORGD:107349068941 RGDPMID:28522730|REF_RGD_ID:329902054
HSD11B1Pigmyocardial infarction amelioratesISORGD:107349068941 RGDPMID:26465199|REF_RGD_ID:11087531
HSD11B1Pigobesity  ISORGD:7370919068941mRNA:increased expression:adipose tissue:13-fold higher in obese subjects than controls, protein expression also increasedRGDPMID:16914598|REF_RGD_ID:1625071
HSD11B1Pigobesity  ISORGD:28349068941 RGDPMID:15131764|REF_RGD_ID:1625073
HSD11B1Pigobesity  ISORGD:107349068941 RGDPMID:16612591|REF_RGD_ID:1625072
HSD11B1Pigpre-eclampsia susceptibilityISORGD:7370919068941DNA:SNPs,haplotype: (rs2235543,rs846910) (human)RGDPMID:23659736|REF_RGD_ID:329901926
HSD11B1Pigstatus epilepticus  ISORGD:28349068941mRNA:increased expression:hippocampusRGDPMID:22050960|REF_RGD_ID:5686281
HSD11B1Pigtype 2 diabetes mellitus  ISORGD:28349068941mRNA,protein:increased expression:islet cells:diabetic but not prediabetic Zucker Diabetic Fatty (fa/fa) ratsRGDPMID:14697232|REF_RGD_ID:1625074
1 to 20 of 21 rows
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Reference
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Source
Original Reference(s)
HSD11B1Pigbladder exstrophy-epispadias-cloacal exstrophy complex  ISORGD:7370918554872ClinVar Annotator: match by term: Exstrophy-epispadias complexClinVarPMID:25741868
HSD11B1Pigcortisone reductase deficiency 2  ISORGD:7370918554872ClinVar Annotator: match by term: Cortisone reductase deficiency 2 | ClinVar Annotator: match by term: more ...ClinVarPMID:21325058|PMID:25741868|PMID:28492532
HSD11B1Piggastrointestinal stromal tumor  ISORGD:7370918554872ClinVar Annotator: match by term: Gastrointestinal stromal tumorClinVarPMID:28492532
HSD11B1Pigparathyroid carcinoma  ISORGD:7370918554872ClinVar Annotator: match by term: Parathyroid carcinomaClinVarPMID:28492532
1 to 9 of 9 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
HSD11B1PigAbdominal Obesity  ISORGD:7370919068941CTD Direct Evidence: marker/mechanismCTDPMID:15199296
HSD11B1Pigallergic contact dermatitis  ISORGD:7370919068941CTD Direct Evidence: marker/mechanismCTDPMID:16033404
HSD11B1Pigcortisone reductase deficiency  ISORGD:7370919068941CTD Direct Evidence: marker/mechanismCTDPMID:25526675
HSD11B1PigExperimental Diabetes Mellitus  ISORGD:7370919068941CTD Direct Evidence: marker/mechanismCTDPMID:14697232
HSD11B1Pighyperglycemia  ISORGD:7370919068941CTD Direct Evidence: marker/mechanismCTDPMID:14697232
HSD11B1Pighypertension  ISORGD:7370919068941CTD Direct Evidence: marker/mechanismCTDPMID:15199296|PMID:21786805|PMID:9683905
HSD11B1PigInsulin Resistance  ISORGD:7370919068941CTD Direct Evidence: marker/mechanismCTDPMID:21786805
HSD11B1Pigobesity  ISORGD:7370919068941CTD Direct Evidence: marker/mechanismCTDPMID:17628001|PMID:21786805
HSD11B1Pigrheumatoid arthritis  ISORGD:7370919068941CTD Direct Evidence: marker/mechanismCTDPMID:19192274
1 to 9 of 9 rows
Object Symbol
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Source
Original Reference(s)
HSD11B1Pigcortisone reductase deficiency 2  ISORGD:7370917240710 OMIM 


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
HSD11B1Pigdeoxynivalenol decreases expressionEXP 6480464deoxynivalenol results in decreased expression of HSD11B1 mRNACTDPMID:35307453


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
HSD11B1Pigcellular response to estradiol stimulus  ISORGD:28349068941 RGDPMID:19380458|REF_RGD_ID:4891036
HSD11B1Pigglucocorticoid biosynthetic process  ISORGD:28349068941 RGDPMID:12460758|REF_RGD_ID:1625060
HSD11B1Pigglucocorticoid catabolic process  ISORGD:28349068941 RGDPMID:12460758|REF_RGD_ID:1625060
HSD11B1Piglung development acts_upstream_of_or_withinIEAUniProtKB:P50172|ensembl:ENSMUSP00000016338150520179 EnsemblGO_REF:0000107
HSD11B1Pigmineralocorticoid metabolic process  ISORGD:28349068941 RGDPMID:2808402|REF_RGD_ID:728825
HSD11B1Pigregulation of pentose-phosphate shunt  ISORGD:28349068941 RGDPMID:16234247|REF_RGD_ID:1625062
HSD11B1Pigresponse to nutrient levels  ISORGD:28349068941low protein dietRGDPMID:16941667|REF_RGD_ID:4891037
HSD11B1Pigsteroid catabolic process involved_inIBAPANTHER:PTN000674090|RGD:2834150520179 GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
HSD11B1Pigapical part of cell  ISORGD:28349068941 RGDPMID:12810566|REF_RGD_ID:1625059
HSD11B1Pigendoplasmic reticulum located_inIEAUniProtKB-KW:KW-0256150520179 UniProtGO_REF:0000043
HSD11B1Pigendoplasmic reticulum membrane is_active_inIBAPANTHER:PTN000674090|UniProtKB:P28845150520179 GO_CentralGO_REF:0000033
HSD11B1Pigendoplasmic reticulum membrane located_inIEAUniProtKB-SubCell:SL-0097150520179 UniProtGO_REF:0000044
HSD11B1Pigendoplasmic reticulum membrane located_inIEAUniProtKB:P28845|ensembl:ENSP00000355994150520179 EnsemblGO_REF:0000107
HSD11B1Pigmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
HSD11B1Pignuclear membrane  ISORGD:28349068941 RGDPMID:11250946|REF_RGD_ID:1625110

Molecular Function
1 to 9 of 9 rows

  
Object Symbol
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Term
Qualifier
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Reference
Notes
Source
Original Reference(s)
HSD11B1Pig11-beta-hydroxysteroid dehydrogenase (NADP+) activity enablesIBAMGI:103562|PANTHER:PTN000674090|UniProtKB:P28845150520179 GO_CentralGO_REF:0000033
HSD11B1Pig11-beta-hydroxysteroid dehydrogenase (NADP+) activity enablesIEAUniProtKB:P28845|UniProtKB:P50172|ensembl:ENSMUSP00000016338|ensembl:ENSP00000355994150520179 EnsemblGO_REF:0000107
HSD11B1PigNADP binding  ISORGD:28349068941 RGDPMID:15761036|REF_RGD_ID:1625105
HSD11B1PigNADP binding enablesIEAUniProtKB:P28845|ensembl:ENSP00000355994150520179 EnsemblGO_REF:0000107
HSD11B1Pigoxidoreductase activity enablesIEAUniProtKB-KW:KW-0560150520179 UniProtGO_REF:0000043
HSD11B1Pigoxidoreductase activity enablesIEAInterPro:IPR020904150520179 InterProGO_REF:0000002
HSD11B1Pigprotein homodimerization activity enablesIEAUniProtKB:P28845|ensembl:ENSP00000355994150520179 EnsemblGO_REF:0000107
HSD11B1Pigsteroid binding  ISOCHEBI:168279068941 RGDPMID:15761036|REF_RGD_ID:1625105
HSD11B1Pigsteroid binding enablesIBAPANTHER:PTN000674090|RGD:2834150520179 GO_CentralGO_REF:0000033
1 to 9 of 9 rows

Imported Annotations - SMPDB

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
HSD11B1Pig11-beta-hydroxylase deficiency pathway  ISORGD:7370919068941 SMPDBSMP:00575
HSD11B1Pig17-alpha-hydroxylase deficiency pathway  ISORGD:7370919068941 SMPDBSMP:00372
HSD11B1Pig21-alpha-hydroxylase deficiency pathway  ISORGD:7370919068941 SMPDBSMP:00373
HSD11B1Pigapparent mineralocorticoid excess syndrome pathway  ISORGD:7370919068941 SMPDBSMP:00717
HSD11B1Piglipoid congenital adrenal hyperplasia pathway  ISORGD:7370919068941 SMPDBSMP:00371
HSD11B1Pigsteroid hormone biosynthetic pathway   ISORGD:7370919068941 SMPDBSMP:00130
PMID:12904312   PMID:14681463   PMID:15926111   PMID:16271354   PMID:17145712   PMID:19500728   PMID:20020184   PMID:30032202  



HSD11B1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9133,231,451 - 133,278,396 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19133,231,451 - 133,278,396 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
HSD11B1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381209,686,179 - 209,734,929 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1209,686,178 - 209,734,949 (+)EnsemblGRCh38hg38GRCh38
GRCh371209,859,524 - 209,908,274 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361207,926,173 - 207,974,918 (+)NCBINCBI36Build 36hg18NCBI36
Build 341206,266,585 - 206,296,690NCBI
Celera1183,090,437 - 183,139,187 (+)NCBICelera
Cytogenetic Map1q32.2NCBI
HuRef1180,534,794 - 180,583,575 (+)NCBIHuRef
CHM1_11211,131,921 - 211,180,673 (+)NCBICHM1_1
T2T-CHM13v2.01208,932,934 - 208,981,687 (+)NCBIT2T-CHM13v2.0
Hsd11b1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391192,903,917 - 192,946,345 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1192,903,942 - 192,946,383 (-)EnsemblGRCm39 Ensembl
GRCm381193,221,640 - 193,264,045 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1193,221,634 - 193,264,075 (-)EnsemblGRCm38mm10GRCm38
MGSCv371195,047,834 - 195,090,239 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361194,922,413 - 194,964,769 (-)NCBIMGSCv36mm8
Celera1200,096,784 - 200,141,189 (-)NCBICelera
Cytogenetic Map1H6NCBI
cM Map197.67NCBI
Hsd11b1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr813107,277,526 - 107,327,462 (-)NCBIGRCr8
mRatBN7.213104,728,539 - 104,798,884 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl13104,728,539 - 104,788,687 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx13107,266,432 - 107,292,403 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.013108,650,289 - 108,676,261 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.013105,868,245 - 105,894,215 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.013111,946,626 - 111,996,536 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13111,926,442 - 111,972,603 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013116,502,230 - 116,551,778 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.413109,063,491 - 109,089,468 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.113109,252,609 - 109,278,318 (-)NCBI
Celera13104,178,893 - 104,204,865 (-)NCBICelera
Cytogenetic Map13q27NCBI
Hsd11b1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554892,497,680 - 2,524,805 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554892,500,928 - 2,524,715 (-)NCBIChiLan1.0ChiLan1.0
HSD11B1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2139,662,235 - 39,715,349 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1139,632,569 - 39,681,576 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01185,262,599 - 185,311,417 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11190,086,449 - 190,116,765 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1190,086,449 - 190,116,765 (+)Ensemblpanpan1.1panPan2
HSD11B1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.178,344,380 - 8,409,901 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl78,344,447 - 8,409,897 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha77,959,522 - 7,986,906 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.078,045,319 - 8,110,393 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl78,045,392 - 8,110,389 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.178,012,426 - 8,039,787 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.078,109,437 - 8,136,847 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.078,170,917 - 8,198,302 (+)NCBIUU_Cfam_GSD_1.0
Hsd11b1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934466,118,456 - 66,179,043 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365573,357,016 - 3,403,714 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365573,358,809 - 3,403,461 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HSD11B1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12519,720,096 - 19,772,806 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2519,719,848 - 19,750,200 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605520,319,360 - 20,369,697 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hsd11b1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248072,261,006 - 2,293,804 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248072,260,702 - 2,293,962 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in HSD11B1
1471 total Variants



alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3


1 to 20 of 20 rows
RefSeq Transcripts NM_001348961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_214248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021102234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021102235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021102237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021102238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021102239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF414124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK344628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK344692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK346211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK391330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK391467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK394626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK394749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK400759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU481895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01055005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP735788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 20 of 20 rows

Ensembl Acc Id: ENSSSCT00000017010   ⟹   ENSSSCP00000016556
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl9133,231,474 - 133,278,396 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000065438   ⟹   ENSSSCP00000050834
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl9133,231,451 - 133,257,318 (-)Ensembl
RefSeq Acc Id: NM_001348961   ⟹   NP_001335890
RefSeq Status: VALIDATED
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,231,451 - 133,257,318 (-)NCBI
Sequence:
RefSeq Acc Id: NM_214248   ⟹   NP_999413
RefSeq Status: VALIDATED
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,231,451 - 133,257,318 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021102234   ⟹   XP_020957893
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,231,464 - 133,278,345 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021102235   ⟹   XP_020957894
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,231,472 - 133,278,396 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021102237   ⟹   XP_020957896
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,231,475 - 133,278,394 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021102238   ⟹   XP_020957897
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,231,472 - 133,278,396 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021102239   ⟹   XP_020957898
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,231,481 - 133,267,332 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001335890   ⟸   NM_001348961
- Peptide Label: isoform 2
- UniProtKB: A0A4X1TDV6 (UniProtKB/TrEMBL),   A0A287B2Z3 (UniProtKB/TrEMBL),   A0A8D0TCF3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_999413   ⟸   NM_214248
- Peptide Label: isoform 1
- UniProtKB: A0A8D0Y7I8 (UniProtKB/TrEMBL),   A0A287AH74 (UniProtKB/TrEMBL),   A0A4X1TFL3 (UniProtKB/TrEMBL),   F1SF47 (UniProtKB/TrEMBL),   A0A8D1NHU4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020957893   ⟸   XM_021102234
- Peptide Label: isoform X1
- UniProtKB: A0A8D0Y7I8 (UniProtKB/TrEMBL),   A0A287AH74 (UniProtKB/TrEMBL),   A0A4X1TFL3 (UniProtKB/TrEMBL),   F1SF47 (UniProtKB/TrEMBL),   A0A8D1NHU4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020957894   ⟸   XM_021102235
- Peptide Label: isoform X1
- UniProtKB: A0A8D0Y7I8 (UniProtKB/TrEMBL),   A0A287AH74 (UniProtKB/TrEMBL),   A0A4X1TFL3 (UniProtKB/TrEMBL),   F1SF47 (UniProtKB/TrEMBL),   A0A8D1NHU4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020957897   ⟸   XM_021102238
- Peptide Label: isoform X1
- UniProtKB: A0A8D0Y7I8 (UniProtKB/TrEMBL),   A0A287AH74 (UniProtKB/TrEMBL),   A0A4X1TFL3 (UniProtKB/TrEMBL),   F1SF47 (UniProtKB/TrEMBL),   A0A8D1NHU4 (UniProtKB/TrEMBL)
- Sequence:



1 to 40 of 66 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSSSCG00000015616 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015058579 UniProtKB/TrEMBL
  ENSSSCG00025073409 UniProtKB/TrEMBL
  ENSSSCG00030070109 UniProtKB/TrEMBL
  ENSSSCG00035020128 UniProtKB/TrEMBL
  ENSSSCG00040068134 UniProtKB/TrEMBL
  ENSSSCG00045020651 UniProtKB/TrEMBL
  ENSSSCG00050065079 UniProtKB/TrEMBL
  ENSSSCG00055001039 UniProtKB/TrEMBL
  ENSSSCG00060075415 UniProtKB/TrEMBL
  ENSSSCG00065031141 UniProtKB/TrEMBL
  ENSSSCG00070009036 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000017010 ENTREZGENE
  ENSSSCT00000017010.4 UniProtKB/TrEMBL
  ENSSSCT00000065438 ENTREZGENE
  ENSSSCT00000065438.2 UniProtKB/TrEMBL
  ENSSSCT00015078600.1 UniProtKB/TrEMBL
  ENSSSCT00015078733.1 UniProtKB/TrEMBL
  ENSSSCT00025101088.1 UniProtKB/TrEMBL
  ENSSSCT00025101176.1 UniProtKB/TrEMBL
  ENSSSCT00030098091.1 UniProtKB/TrEMBL
  ENSSSCT00030098182.1 UniProtKB/TrEMBL
  ENSSSCT00035026167.1 UniProtKB/TrEMBL
  ENSSSCT00035026176.1 UniProtKB/TrEMBL
  ENSSSCT00040093270.1 UniProtKB/TrEMBL
  ENSSSCT00040093400.1 UniProtKB/TrEMBL
  ENSSSCT00045035325.1 UniProtKB/TrEMBL
  ENSSSCT00045035382.1 UniProtKB/TrEMBL
  ENSSSCT00050088645.1 UniProtKB/TrEMBL
  ENSSSCT00055001831.1 UniProtKB/TrEMBL
  ENSSSCT00055001848.1 UniProtKB/TrEMBL
  ENSSSCT00055001869.1 UniProtKB/TrEMBL
  ENSSSCT00055001913.1 UniProtKB/TrEMBL
  ENSSSCT00055001949.1 UniProtKB/TrEMBL
  ENSSSCT00060103266.1 UniProtKB/TrEMBL
  ENSSSCT00060103415.1 UniProtKB/TrEMBL
  ENSSSCT00065042110.1 UniProtKB/TrEMBL
  ENSSSCT00065042116.1 UniProtKB/TrEMBL
  ENSSSCT00070017519.1 UniProtKB/TrEMBL
  ENSSSCT00070017527.1 UniProtKB/TrEMBL
1 to 40 of 66 rows