Or5p75-ps1 (olfactory receptor family 5 subfamily P member 75, pseudogene 1) - Rat Genome Database

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Gene: Or5p75-ps1 (olfactory receptor family 5 subfamily P member 75, pseudogene 1) Rattus norvegicus
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Symbol: Or5p75-ps1
Name: olfactory receptor family 5 subfamily P member 75, pseudogene 1
RGD ID: 1334304
Description: olfactory receptor pseudogene
Type: pseudo (Ensembl: pseudogene)
RefSeq Status: REVIEWED
Previously known as: ENSRNOG00000066644; olfactory receptor pseudogene 269; Olr269-ps
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81171,870,699 - 171,871,643 (+)NCBIGRCr8
mRatBN7.21162,438,130 - 162,439,074 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1162,438,130 - 162,439,074 (+)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl1162,438,130 - 162,439,074 (+)NCBImRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1170,746,968 - 170,747,911 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01177,932,975 - 177,933,918 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
Rnor_6.01172,769,896 - 172,770,840 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01179,768,845 - 179,769,789 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41165,977,027 - 165,977,971 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11166,087,589 - 166,088,734 (+)NCBI
Celera1160,359,985 - 160,360,929 (+)NCBICelera
Cytogenetic Map1q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



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Reference Title
Reference Citation
1. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs RA, etal., Nature 2004 Apr 1;428(6982):493-521.


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Variants in Or5p75-ps1
29 total Variants

1 to 10 of 76 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
61442Strs1Sensitivity to stroke QTL 17.4cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)1121767634166767634Rat
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
1598866Bp287Blood pressure QTL 2875.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1123350408182418476Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1144267353196383668Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
631199Cm23Cardiac mass QTL 234.60.0004heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1115585465172949803Rat

1 to 10 of 76 rows





RefSeq Transcripts NG_003633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC118350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000100863
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1162,438,130 - 162,439,074 (+)Ensembl

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-57914 BioCyc
Ensembl Genes ENSRNOG00000066644 Ensembl
NCBI Gene 405288 ENTREZGENE
PhenoGen Or5p75-ps1 PhenoGen
RatGTEx ENSRNOG00000066644 RatGTEx


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-16 Or5p75-ps1  olfactory receptor family 5 subfamily P member 75, pseudogene 1  Olr269-ps  olfactory receptor pseudogene 269  Symbol and Name Changed 1299863 APPROVED
2022-06-02 Olr269-ps  olfactory receptor pseudogene 269  ENSRNOG00000066644    Data merged from RGD:150344475 737654 PROVISIONAL
2021-08-31 ENSRNOG00000066644        Symbol and Name status set to provisional 45752 PROVISIONAL
2005-02-04 Olr269-ps  olfactory receptor pseudogene 269      Symbol and Name status set to approved 70820 APPROVED