CD68 (CD68 molecule) - Rat Genome Database

Name: CD68
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: CD68 (CD68 molecule) Canis lupus familiaris

Analyze

Symbol:

CD68

Name:

CD68 molecule

RGD ID:

13246215

Description:

INVOLVED IN autocrine signaling (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to nutrient levels (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); adult T-cell leukemia/lymphoma (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN cytoplasm (inferred); endosome (inferred); endosome membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

macrosialin

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CD68 (CD68 molecule)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Cd68 (CD68 antigen)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Cd68 (Cd68 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cd68 (CD68 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CD68 (CD68 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cd68 (CD68 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CD68 (CD68 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CD68 (CD68 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cd68 (CD68 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	32,500,899 - 32,503,355 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	32,501,380 - 32,503,183 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	32,640,582 - 32,642,831 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	32,606,269 - 32,608,583 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	32,606,541 - 32,608,348 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	32,573,887 - 32,576,133 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	32,530,349 - 32,532,594 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	32,709,456 - 32,711,701 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acquired immunodeficiency syndrome (ISO)

adult T-cell leukemia/lymphoma (ISO)

amyotrophic lateral sclerosis type 1 (ISO)

common variable immunodeficiency (ISO)

congenital myasthenic syndrome 2A (ISO)

COVID-19 (ISO)

diverticulitis of colon (ISO)

dyskeratosis congenita (ISO)

end stage renal disease (ISO)

endometriosis of pelvic peritoneum (ISO)

Epstein-Barr virus infectious disease (ISO)

Experimental Colitis (ISO)

Experimental Diabetes Mellitus (ISO)

Experimental Liver Cirrhosis (ISO)

extrahepatic cholestasis (ISO)

hepatitis B (ISO)

hepatocellular carcinoma (ISO)

HIV Encephalitis (ISO)

Hodgkin's lymphoma (ISO)

human immunodeficiency virus infectious disease (ISO)

hyperinsulinism (ISO)

Insulin Resistance (ISO)

ischemia (ISO)

Li-Fraumeni syndrome (ISO)

Merkel cell carcinoma (ISO)

metabolic dysfunction and alcohol associated liver disease (ISO)

metabolic dysfunction-associated steatohepatitis (ISO)

obesity (ISO)

primary biliary cholangitis (ISO)

psoriatic arthritis (ISO)

severe acute respiratory syndrome (ISO)

Spontaneous Abortions (ISO)

very long chain acyl-CoA dehydrogenase deficiency (ISO)

viral pneumonia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

autocrine signaling (ISO)

cellular response to lipopolysaccharide (ISO)

cellular response to nutrient levels (ISO)

cellular response to oxidised low-density lipoprotein particle stimulus (ISO)

inflammatory response to antigenic stimulus (ISO)

negative regulation of dendritic cell antigen processing and presentation (ISO)

response to ethanol (ISO)

Cellular Component

cytoplasm (IEA)

endosome (IEA)

endosome membrane (IEA)

intracellular membrane-bounded organelle (IEA)

lysosomal membrane (IEA)

lysosome (IEA)

membrane (IEA)

plasma membrane (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

CD68
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	32,500,899 - 32,503,355 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	32,501,380 - 32,503,183 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	32,640,582 - 32,642,831 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	32,606,269 - 32,608,583 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	32,606,541 - 32,608,348 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	32,573,887 - 32,576,133 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	32,530,349 - 32,532,594 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	32,709,456 - 32,711,701 (+)	NCBI		UU_Cfam_GSD_1.0

CD68
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	7,579,638 - 7,582,111 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	7,579,491 - 7,582,111 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	7,482,956 - 7,485,429 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	7,423,529 - 7,426,153 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	7,423,707 - 7,426,150	NCBI
Celera	17	7,509,128 - 7,511,752 (+)	NCBI		Celera
Cytogenetic Map	17	p13.1	NCBI
HuRef	17	7,376,970 - 7,379,593 (+)	NCBI		HuRef
CHM1_1	17	7,491,734 - 7,494,362 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	7,483,886 - 7,486,361 (+)	NCBI		T2T-CHM13v2.0

Cd68
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	69,555,039 - 69,556,996 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	69,555,039 - 69,556,979 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	69,664,213 - 69,666,170 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	69,664,213 - 69,666,153 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	69,477,873 - 69,479,564 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	70,248,478 - 70,250,169 (-)	NCBI		MGSCv36	mm8
MGSCv36	11	69,480,566 - 69,482,257 (-)	NCBI		MGSCv36	mm8
Cytogenetic Map	11	B3	NCBI
cM Map	11	42.86	NCBI

Cd68
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	54,880,562 - 54,882,441 (-)	NCBI		GRCr8
mRatBN7.2	10	54,381,814 - 54,383,693 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	54,381,815 - 54,383,697 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	59,044,451 - 59,046,330 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	58,533,003 - 58,534,882 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	54,040,608 - 54,042,465 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	56,268,726 - 56,270,605 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	56,268,720 - 56,270,640 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	56,014,364 - 56,016,243 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	56,481,701 - 56,483,580 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	56,495,323 - 56,497,228 (-)	NCBI
Celera	10	53,536,351 - 53,538,212 (-)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

Cd68
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955467	9,341,364 - 9,343,836 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955467	9,340,490 - 9,343,912 (-)	NCBI	ChiLan1.0	ChiLan1.0

CD68
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	15,174,231 - 15,176,798 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	17,140,359 - 17,142,865 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	7,610,725 - 7,613,696 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	7,596,995 - 7,599,981 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	7,596,947 - 7,599,981 (+)	Ensembl	panpan1.1		panPan2

Cd68
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	47,384,190 - 47,386,943 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936595	858,289 - 861,131 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CD68
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	52,874,785 - 52,877,695 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	52,874,754 - 52,877,256 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	55,296,987 - 55,299,491 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CD68
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	6,956,633 - 6,959,645 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	6,957,212 - 6,959,042 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	14,448,764 - 14,451,756 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cd68
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624786	10,195,337 - 10,197,963 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CD68
26 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022418524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038475537	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038536706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038600882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038665425	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000026361 ⟹ ENSCAFP00000024483

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	32,501,380 - 32,503,183 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845041659 ⟹ ENSCAFP00845032669

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	5	32,606,541 - 32,608,348 (+)	Ensembl

RefSeq Acc Id:

XM_022418524 ⟹ XP_022274232

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	32,500,899 - 32,503,355 (+)	NCBI
Dog10K_Boxer_Tasha	5	32,640,582 - 32,642,831 (+)	NCBI

Sequence:

show sequence

GTCCCTCAAGTTTCCCTTGGGTTTCCTTTTTTTGTTATCCTCTCCCTGCTGACCCGCTAATGGG
GTAGCATTTGTTGGCTAGTGACCCACTCTAAAGGCCAAGACGCAAGCACCATCATAAGTGCCTC
ACATGTTCTGTCAAGAGGAAGTGACAAATGGAAAAGAGGGAATAGAAACACTTAACCCCTAGAA
CTGGAGGACATAAGCAAGGGGTGGGGTGCTGTTCCCCGCTGGTTCTGTAACCCCTCCGGCCCAC
CAAACAGGCTGAAGTAGACAAGTAGGTCCGCAAGGACCAACTGTCCCCAAACTCCGCATCTACC
TGTGATATTGAGGCTGGTGACCCATCCCCTCACTTGGTGACAGGGGTTCAATGACTAAGTGATT
GGTGGCTGGGGCTGAGGTGCCTGAGTCAGGCTGGGGGTGGACTGGGCTGCCACAGGAAGTCAGA
CACTTAATTCCTCTTCCAAAAGAAGGCAGAGGCTACAGGCTGGTGTTGAACACACCGTCCCGCA
CCGACTGGGGTGAGGCCGATCGGTTATGAGGCCAGCCGTGTTTTTCTTGGGGGCCTTGGTGGGG
CTGCTAGCAGCCCAGGGGACCCGGAGCGACTGTCCCCATAAAAAGTCGGCCACCCTGCTGCCCT
CCTTCACGGTGACCCCTACGGCTACAGAGAGCACAGGAAGCCCTGGGACCACCAGCCACAGCAC
CACCACCGCGGAGACCACCAGCCATGCGCCCAACACCACCACTCACCAGGCCCCGACAACCCCG
GGGCACAGAAACACCACCATTCACCCAACCACGAGCAACAGCACAAGCAACACCACGGGCACCA
CGGGCACCGGCAAACCCCACACCTCCACCAGCTACACCCAGCCGGGGCCAGGGCCAAGGCCACC
ACCTCCCAGTCCCGGCCCTGGCCCCCAGGACGCCATAGGAGACTACACTTGGACTACGGGTTCC
CAGCCCTGCGCCCGGCTCCAAGCCCGGATTCAGATCGGGGTTGTGTACCCAACCCAGGCCGGAG
GCCAGGCCTGGGGCATCTCGGTGCTGAACCCCAACAGTACCAAGCCCTGGGGGGACTGTGACGG
GGCCCGCCCCCATCTGCTTCTCTCCTTCCCTTTCGGGCAGCTCAGCTTCGGGTTCACACAGGAG
CCGCAGCAGGGTTCAGTCTACCTCGACTACCTGGCTCTGCAGTACAACGTGTCCTTTCCGCAGG
CGGCGCAGTGGACATTCTCAGGTCAGAACGCATCCCTCCGAGCTCTCCAAGCCCCCCTGGGCCA
GAGCTTCAGCTGCAGAAATGCAAGCATCCTTCTTACGCCAGCTCTGCGCCTTGACCTGCTCCAC
CTGAAGCTGCAGGCTGCTCAGCTGCCCCCTTCAGGGGCCTTTGGGCCAAGTTTCTCTTGTCCCA
GCGAACACTTCAACCTGCTGCCCCTCATCGTCGGCGTGATCTCACTCGGCCTCCTCGCCCTGGC
ACTGGTTACATTCTGCATTATCAGGAGACGCCCACCCACCTACCAGCCCCTCTGAGCATGTCCC
CATCCTTGATACCAGTATCAAGCTTGGCGGCGGGGGGGGGGGGGGCATTCTCATCACCCAACTG
ACTCAGAAACAAAGTTACCTTCCTTCTCAGTCTTCTGGAACAAAAATAGAACTAATGCCATCTG
AAGGGATGCAGGAGAGAGAAAGGGTCATAAACATGACATAGTTCTCCTCCCCCATCCCCAGCAT
AATAAAACCTGCTCGAAACACTGTC

hide sequence

RefSeq Acc Id:

XM_038475537 ⟹ XP_038331465

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	32,573,887 - 32,576,133 (+)	NCBI

RefSeq Acc Id:

XM_038536706 ⟹ XP_038392634

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	32,709,456 - 32,711,701 (+)	NCBI

RefSeq Acc Id:

XM_038600882 ⟹ XP_038456810

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	32,530,349 - 32,532,594 (+)	NCBI

RefSeq Acc Id:

XM_038665425 ⟹ XP_038521353

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	32,606,269 - 32,608,583 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_022274232	(Get FASTA)	NCBI Sequence Viewer
	XP_038331465	(Get FASTA)	NCBI Sequence Viewer
	XP_038392634	(Get FASTA)	NCBI Sequence Viewer
	XP_038456810	(Get FASTA)	NCBI Sequence Viewer
	XP_038521353	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000024483.2
	ENSCAFP00040009127.1
	ENSCAFP00845032669
	ENSCAFP00845032669.1

RefSeq Acc Id:

XP_022274232 ⟸ XM_022418524

- UniProtKB:

A0A8C0Q9Z4 (UniProtKB/TrEMBL), A0A8P0NHV1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MRPAVFFLGALVGLLAAQGTRSDCPHKKSATLLPSFTVTPTATESTGSPGTTSHSTTTAETTSH
APNTTTHQAPTTPGHRNTTIHPTTSNSTSNTTGTTGTGKPHTSTSYTQPGPGPRPPPPSPGPGP
QDAIGDYTWTTGSQPCARLQARIQIGVVYPTQAGGQAWGISVLNPNSTKPWGDCDGARPHLLLS
FPFGQLSFGFTQEPQQGSVYLDYLALQYNVSFPQAAQWTFSGQNASLRALQAPLGQSFSCRNAS
ILLTPALRLDLLHLKLQAAQLPPSGAFGPSFSCPSEHFNLLPLIVGVISLGLLALALVTFCIIR
RRPPTYQPL

hide sequence

Ensembl Acc Id:

ENSCAFP00000024483 ⟸ ENSCAFT00000026361

RefSeq Acc Id:

XP_038331465 ⟸ XM_038475537

RefSeq Acc Id:

XP_038456810 ⟸ XM_038600882

RefSeq Acc Id:	XP_038521353 ⟸ XM_038665425
- UniProtKB:	A0A8C0K4Q1 (UniProtKB/TrEMBL), A0A8I3PFD2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038392634 ⟸ XM_038536706
- UniProtKB:	A0A8C0Q9Z4 (UniProtKB/TrEMBL), A0A8P0NHV1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845032669 ⟸ ENSCAFT00845041659

Protein Domains

Lysosome-associated membrane glycoprotein 2-like

Promoters

RGD ID:

13683230

Promoter ID:

EPDNEW_C1297

Type:

initiation region

Name:

CD68_1

Description:

CD68 molecule

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	32,501,374 - 32,501,434	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000016641	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00040005597	UniProtKB/TrEMBL
	ENSCAFG00845023581	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000026361.4	UniProtKB/TrEMBL
	ENSCAFT00040010522.1	UniProtKB/TrEMBL
	ENSCAFT00845041659	ENTREZGENE
	ENSCAFT00845041659.1	UniProtKB/TrEMBL
Gene3D-CATH	2.40.160.110	UniProtKB/TrEMBL
InterPro	Lamp2-like_luminal	UniProtKB/TrEMBL
	Lysosome-assoc_membr_glycop	UniProtKB/TrEMBL
NCBI Gene	CD68	ENTREZGENE
PANTHER	MACROSIALIN	UniProtKB/TrEMBL
	PTHR11506	UniProtKB/TrEMBL
Pfam	Lamp	UniProtKB/TrEMBL
PRINTS	LYSASSOCTDMP	UniProtKB/TrEMBL
PROSITE	LAMP_3	UniProtKB/TrEMBL
UniProt	A0A8C0K4Q1	ENTREZGENE
	A0A8C0Q9Z4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PFD2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0NHV1	ENTREZGENE
UniProt Secondary	A0A8P0NHV1	UniProtKB/TrEMBL
VGNC ID	VGNC:49704	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD