Hook1 (hook microtubule tethering protein 1) - Rat Genome Database

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Gene: Hook1 (hook microtubule tethering protein 1) Mus musculus
Analyze
Symbol: Hook1
Name: hook microtubule tethering protein 1
RGD ID: 1320627
MGI Page MGI
Description: Enables actin binding activity and microtubule binding activity. Acts upstream of or within Golgi organization; cytoplasmic microtubule organization; and manchette assembly. Located in microtubule cytoskeleton. Is expressed in embryo; forelimb bud; spermatid; and testis. Orthologous to human HOOK1 (hook microtubule tethering protein 1).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: A930033L17Rik; abnormal spermatozoon head shape; az; azh; hook homolog 1; mHK1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39495,855,418 - 95,913,649 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl495,855,477 - 95,913,650 (+)EnsemblGRCm39 Ensembl
GRCm38495,967,181 - 96,025,412 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl495,967,240 - 96,025,413 (+)EnsemblGRCm38mm10GRCm38
MGSCv37495,634,070 - 95,690,968 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36495,459,397 - 95,516,295 (+)NCBIMGSCv36mm8
Celera494,347,244 - 94,404,130 (+)NCBICelera
Cytogenetic Map4C5NCBI
cM Map444.17NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Mammalian late vacuole protein sorting orthologues participate in early endosomal fusion and interact with the cytoskeleton. Richardson SC, etal., Mol Biol Cell 2004 Mar;15(3):1197-210. Epub 2003 Dec 10.
Additional References at PubMed
PMID:1552159   PMID:1759685   PMID:2346121   PMID:8129933   PMID:9674995   PMID:10092124   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11133681   PMID:12075009   PMID:12477932  
PMID:13129914   PMID:14610273   PMID:15489334   PMID:15823567   PMID:16141072   PMID:16141073   PMID:16540102   PMID:17314312   PMID:19091768   PMID:21779533   PMID:21873635   PMID:23426694  
PMID:26238476   PMID:27365401   PMID:28283191   PMID:28671696   PMID:29423001   PMID:31234534   PMID:33230847  


Genomics

Comparative Map Data
Hook1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39495,855,418 - 95,913,649 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl495,855,477 - 95,913,650 (+)EnsemblGRCm39 Ensembl
GRCm38495,967,181 - 96,025,412 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl495,967,240 - 96,025,413 (+)EnsemblGRCm38mm10GRCm38
MGSCv37495,634,070 - 95,690,968 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36495,459,397 - 95,516,295 (+)NCBIMGSCv36mm8
Celera494,347,244 - 94,404,130 (+)NCBICelera
Cytogenetic Map4C5NCBI
cM Map444.17NCBI
HOOK1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38159,814,949 - 59,876,322 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl159,814,786 - 59,876,322 (+)EnsemblGRCh38hg38GRCh38
GRCh37160,280,621 - 60,341,994 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36160,053,121 - 60,114,638 (+)NCBINCBI36Build 36hg18NCBI36
Build 34159,992,553 - 60,050,663NCBI
Celera158,569,347 - 58,630,858 (+)NCBICelera
Cytogenetic Map1p32.1NCBI
HuRef158,391,575 - 58,453,086 (+)NCBIHuRef
CHM1_1160,396,048 - 60,457,518 (+)NCBICHM1_1
T2T-CHM13v2.0159,693,392 - 59,754,772 (+)NCBIT2T-CHM13v2.0
Hook1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85115,940,199 - 116,003,482 (+)NCBIGRCr8
mRatBN7.25110,824,501 - 110,887,791 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5110,824,501 - 110,887,787 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5113,398,070 - 113,461,456 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05115,123,588 - 115,186,837 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05115,186,126 - 115,249,371 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05114,940,053 - 115,000,691 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5114,940,053 - 115,000,691 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05118,887,278 - 118,948,329 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45116,324,845 - 116,397,148 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15116,330,192 - 116,401,230 (+)NCBI
Celera5109,429,863 - 109,492,144 (+)NCBICelera
Cytogenetic Map5q33NCBI
Hook1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546447,732 - 129,414 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546447,895 - 129,414 (-)NCBIChiLan1.0ChiLan1.0
HOOK1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21166,976,173 - 167,037,934 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11166,127,368 - 166,188,994 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0159,072,565 - 59,134,191 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1160,777,771 - 60,839,384 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl160,777,769 - 60,839,384 (+)Ensemblpanpan1.1panPan2
HOOK1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1549,994,930 - 50,060,513 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl549,998,241 - 50,060,525 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha550,061,824 - 50,127,440 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0550,174,930 - 50,240,548 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl550,151,823 - 50,240,588 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1550,126,351 - 50,191,713 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0550,071,546 - 50,137,133 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0550,354,297 - 50,419,906 (-)NCBIUU_Cfam_GSD_1.0
Hook1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505873,256,734 - 73,310,248 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365222,102,787 - 2,159,525 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HOOK1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.16152,636,118 - 152,709,422 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26140,117,269 - 140,192,068 (+)NCBISscrofa10.2Sscrofa10.2susScr3
HOOK1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12073,137,181 - 73,198,389 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2073,133,522 - 73,198,205 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603344,188,365 - 44,257,809 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hook1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624862544,156 - 593,919 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624862540,971 - 594,087 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Hook1
2060 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1679
Count of miRNA genes:782
Interacting mature miRNAs:1005
Transcripts:ENSMUST00000030306, ENSMUST00000107083, ENSMUST00000124202, ENSMUST00000125584, ENSMUST00000125627, ENSMUST00000140128, ENSMUST00000141448, ENSMUST00000143326, ENSMUST00000146947, ENSMUST00000148291, ENSMUST00000156910
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
4142047Mvwf3_mmodifier of von Willebrand factor 3 (mouse)Not determined14010457117072206Mouse
26884449Sklq2_mskull length QTL 2, 5 week (mouse)436700000128993793Mouse
27226724Tibw2_mtibia width 2, proximal, 10 week (mouse)443000000108357197Mouse
1558948Ath8_matherosclerosis 8 (mouse)Not determined445658442105156995Mouse
1357895Ctrcts_mcataract severity (mouse)Not determined445709925138342753Mouse
1300966Pabr2_mplasma apolipoprotein B (human) regulator 2 (mouse)Not determined446332646105801860Mouse
11532714Sluc43_msusceptibility to lung cancer 43 (mouse)446642108123127211Mouse
4141900Skts-fp1_mskin tumor susceptibility in FVB and PWK 1 (mouse)Not determined453550839124055180Mouse
26884434Zlq1_mzygomatic length QTL 1, 5 week (mouse)453700000103257197Mouse
27095905Scvln3_msacral vertebrae length 2, 5 week (mouse)455600000128993793Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
1357870Pfat1_mpredicted fat percentage 1 (mouse)Not determined46361952697619685Mouse
12879903Berr8_mberghei resistance locus 8 (mouse)46422246098222460Mouse
27095939Ulnl9_mulna length 9, 16 week (mouse)465318237118857197Mouse
13506251Cytrq1_mcytokine response QTL 1 (mouse)46571808699718086Mouse
25314312Syncl2_msynaptonemal complex length 2 (mouse)465718237146584457Mouse
12880404Embq1_memotional behavior QTL 1 (mouse)46575720395921546Mouse
27095938Ulnl6_mulna length 6, 10 week (mouse)46671823798588237Mouse
1301757Tlsr4_mthymic lymphoma suppressor region 4 (mouse)Not determined466757130100757258Mouse
1357561Mbsyd_mmetabolic syndrome (mouse)Not determined466888445100888588Mouse
27095900Scvln9_msacral vertebrae length 2, 10 week (mouse)468018237107157197Mouse
27095917Scvln14_msacral vertebrae length 2, 16 week (mouse)468018237130277062Mouse
26884445Sklq7_mskull length QTL 7, 10 week (mouse)468018237150884457Mouse
27095924Pglq2_mpelvic girdle length QTL 2, 5 week (mouse)469118237130727311Mouse
1302057Pgia27_mproteoglycan induced arthritis 27 (mouse)Not determined470067227104067464Mouse
12879897Berr4_mberghei resistance locus 4 (mouse)471982069105982216Mouse
1302044Nss1_mNOD Sjogren's syndrome 1 (mouse)Not determined471982069105982216Mouse
1301739Pitm2_mprion incubation time 2 (mouse)Not determined471982069105982216Mouse
1302031Bulb1_mbulb size 1 (mouse)Not determined474033887108034029Mouse
1301597Anxty_manxiety (mouse)Not determined474137574128009280Mouse
10412193Plep_mplasma lepin levels (mouse)Not determined474444699108444983Mouse
11532700Sluc43d_msusceptibility to lung cancer 43d (mouse)474444699108444983Mouse
11532701Sluc43e_msusceptibility to lung cancer 43e (mouse)474444699108444983Mouse
11532702Sluc43f_msusceptibility to lung cancer 43f (mouse)474444699108444983Mouse
11532703Sluc43g_msusceptibility to lung cancer 43g (mouse)474444699108444983Mouse
11532704Sluc43a_msusceptibility to lung cancer 43a (mouse)474444699108444983Mouse
11532705Sluc43b_msusceptibility to lung cancer 43b (mouse)474444699108444983Mouse
11532706Sluc43c_msusceptibility to lung cancer 43c (mouse)474444699108444983Mouse
11532707Sluc43h_msusceptibility to lung cancer 43h (mouse)474444699108444983Mouse
11532708Sluc43i_msusceptibility to lung cancer 43i (mouse)474444699108444983Mouse
26884431Zlq8_mzygomatic length QTL 8, 16 week (mouse)474718237108357197Mouse
26884406Huml3_mhumerus length 3, 10 week (mouse)475618237100157197Mouse
1301545Gauc_mglucose area under curve (mouse)Not determined476763107110763305Mouse
1300697Sle2_msystemic lupus erythmatosus susceptibility 2 (mouse)Not determined477957579111957775Mouse
11039504Ltpr4a_mLeishmania tropica response 4a (mouse)479365751113365867Mouse
11039505Ltpr4c_mLeishmania tropica response 4c (mouse)479365751113365867Mouse
11039506Ltpr4b_mLeishmania tropica response 4b (mouse)479365751113365867Mouse
11039517Ltpr4_mLeishmania tropica response 4 (mouse)479365751113365867Mouse
12904933Edlmmq3_mextensor digitorum longus muscle mass QTL 3 (mouse)481213991115213991Mouse
1302204Spm1_msplenomegaly modifier (mouse)Not determined482244395116244582Mouse
27095921Pglq12_mpelvic girdle length QTL 12, 16 week (mouse)483118237108357197Mouse
1301867Idd11_minsulin dependent diabetes susceptibility 11 (mouse)Not determined483604870117605006Mouse
27226787Feml14_mfemur length 14, 10 week (mouse)484918237107157197Mouse
26884435Zlq4_mzygomatic length QTL 4, 10 week (mouse)485118237104957197Mouse
1357726Lnopy1_mlens opacity 1 (mouse)Not determined485428838119429037Mouse
1301556Cd4vts1_mCD4 virgin T cell subset 1 (mouse)Not determined485428838119429037Mouse
1301930Papg1_mpulmonary adenoma progression 1 (mouse)Not determined485781167119781279Mouse
1301118Bbaa23_mB.burgdorferi-associated arthritis 23 (mouse)Not determined485781167119781279Mouse
27226801Feml6_mfemur length 6, 5 week (mouse)487518237103257197Mouse
27226746Metcl8_mmetatarsal-calcaneal length 8, 10 week (mouse)487518237107157197Mouse
27226739Metcl14_mmetatarsal-calcaneal length 14, 16 week (mouse)487518237108357197Mouse
27095927Pglq7_mpelvic girdle length QTL 7, 10 week (mouse)488118237108357197Mouse
27226716Metcl2_mmetatarsal-calcaneal length 2, 5 week (mouse)488118237118557197Mouse
27226770Tibl11_mtibia length 11, 10 week (mouse)488518237108357197Mouse
27226766Tibl17_mtibia length 17, 16 week (mouse)488518237108457197Mouse
11532738Abd1_mautoimmune biliary disease 1 (mouse)488982069116271120Mouse
4141623W6q13_mweight 6 weeks QTL 13 (mouse)Not determined88982069140468203Mouse
4141549W10q10_mweight 10 weeks QTL 10 (mouse)Not determined88982069140468203Mouse
4141093W3q17_mweight 3 weeks QTL 17 (mouse)Not determined88982069140468203Mouse
39128212Lwq21_mliver weight QTL 21 (mouse)488982069140468203Mouse
1301823Bmd7_mbone mineral density 7 (mouse)Not determined488982069151654550Mouse
13824979Epid1_mepididymis and vas deferens weight 1 (mouse)48988823799857197Mouse
13824982Svwq1_mseminal vesicle weight QTL 1 (mouse)489888237118857197Mouse
1300918Stheal4_msoft tissue heal 4 (mouse)Not determined489969627123969747Mouse
11553870Cmmm_mcarcinoma modifier of MSM (mouse)490590668124590781Mouse
15039368Nmrs19_mNAFLD-associated magnetic resonance shift 19 (mouse)490882780124882780Mouse
27226760Feml19_mfemur length 19, 16 week (mouse)490888237108457197Mouse
27226782Tibl2_mtibia length 2, 5 week (mouse)490888237111257197Mouse
13208562Wght7_mweight 7 (mouse)490888237148084457Mouse
12904002Opfaq9_mopen field activity QTL 9 (mouse)492975790126975790Mouse
1301731Cafq2_mcaffeine metabolism QTL 2 (mouse)Not determined494732255128732454Mouse
1301233Sbw2_msplenomegaly-NZB x NZW 2 (mouse)Not determined494957579128009280Mouse
1301815Sles2_msystemic lupus erythmatosus suppressor 2 (mouse)Not determined494957579150676858Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_030014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_376374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_376377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF487912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK020924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL772212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC061688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000030306   ⟹   ENSMUSP00000030306
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl495,855,477 - 95,913,650 (+)Ensembl
GRCm38.p6 Ensembl495,967,240 - 96,025,413 (+)Ensembl
RefSeq Acc Id: ENSMUST00000107083   ⟹   ENSMUSP00000102698
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl495,855,606 - 95,887,775 (+)Ensembl
GRCm38.p6 Ensembl495,967,369 - 95,999,538 (+)Ensembl
RefSeq Acc Id: ENSMUST00000124202
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl495,891,857 - 95,898,155 (+)Ensembl
GRCm38.p6 Ensembl496,003,620 - 96,009,918 (+)Ensembl
RefSeq Acc Id: ENSMUST00000125584
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl495,904,421 - 95,905,914 (+)Ensembl
GRCm38.p6 Ensembl496,016,184 - 96,017,677 (+)Ensembl
RefSeq Acc Id: ENSMUST00000125627
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl495,855,600 - 95,903,717 (+)Ensembl
GRCm38.p6 Ensembl495,967,363 - 96,015,480 (+)Ensembl
RefSeq Acc Id: ENSMUST00000140128
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl495,908,248 - 95,910,468 (+)Ensembl
GRCm38.p6 Ensembl496,020,011 - 96,022,231 (+)Ensembl
RefSeq Acc Id: ENSMUST00000141448
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl495,862,623 - 95,910,579 (+)Ensembl
GRCm38.p6 Ensembl495,974,386 - 96,022,342 (+)Ensembl
RefSeq Acc Id: ENSMUST00000143326
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl495,901,530 - 95,907,864 (+)Ensembl
GRCm38.p6 Ensembl496,013,293 - 96,019,627 (+)Ensembl
RefSeq Acc Id: ENSMUST00000146947
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl495,890,683 - 95,897,762 (+)Ensembl
GRCm38.p6 Ensembl496,002,446 - 96,009,525 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148291
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl495,892,572 - 95,910,721 (+)Ensembl
GRCm38.p6 Ensembl496,004,335 - 96,022,484 (+)Ensembl
RefSeq Acc Id: ENSMUST00000156910
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl495,909,478 - 95,913,628 (+)Ensembl
GRCm38.p6 Ensembl496,021,241 - 96,025,391 (+)Ensembl
RefSeq Acc Id: NM_030014   ⟹   NP_084290
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39495,855,616 - 95,912,514 (+)NCBI
GRCm38495,967,379 - 96,024,277 (+)NCBI
MGSCv37495,634,070 - 95,690,968 (+)RGD
Celera494,347,244 - 94,404,130 (+)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006503487   ⟹   XP_006503550
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39495,855,418 - 95,905,262 (+)NCBI
GRCm38495,967,181 - 96,017,025 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006503488   ⟹   XP_006503551
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39495,855,418 - 95,905,927 (+)NCBI
GRCm38495,967,181 - 96,017,690 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030253920   ⟹   XP_030109780
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39495,858,031 - 95,913,649 (+)NCBI
GRCm38495,969,792 - 96,024,936 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001784219
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39495,855,418 - 95,913,649 (+)NCBI
GRCm38495,967,181 - 96,025,412 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001784220
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39495,855,418 - 95,913,649 (+)NCBI
GRCm38495,967,181 - 96,025,412 (+)NCBI
Sequence:
RefSeq Acc Id: XR_376374
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39495,855,418 - 95,905,914 (+)NCBI
GRCm38495,967,181 - 96,017,677 (+)NCBI
Sequence:
RefSeq Acc Id: XR_376377
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39495,855,418 - 95,913,649 (+)NCBI
GRCm38495,967,181 - 96,025,412 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_084290   ⟸   NM_030014
- UniProtKB: Q8K454 (UniProtKB/Swiss-Prot),   Q8K0P1 (UniProtKB/Swiss-Prot),   Q8BIZ2 (UniProtKB/Swiss-Prot),   Q9CTN6 (UniProtKB/Swiss-Prot),   Q8BIL5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006503551   ⟸   XM_006503488
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006503550   ⟸   XM_006503487
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_030109780   ⟸   XM_030253920
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000102698   ⟸   ENSMUST00000107083
RefSeq Acc Id: ENSMUSP00000030306   ⟸   ENSMUST00000030306
Protein Domains
Calponin-homology (CH)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BIL5-F1-model_v2 AlphaFold Q8BIL5 1-728 view protein structure

Promoters
RGD ID:6835476
Promoter ID:MM_KWN:38514
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:ENSMUST00000107083,   OTTMUST00000018458,   OTTMUST00000018460
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36495,633,724 - 95,634,224 (+)MPROMDB
RGD ID:6883886
Promoter ID:EPDNEW_M5394
Type:initiation region
Name:Hook1_1
Description:Mus musculus hook microtubule tethering protein 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38495,967,361 - 95,967,421EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1925213 AgrOrtholog
Ensembl Genes ENSMUSG00000028572 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000030306 ENTREZGENE
  ENSMUST00000030306.14 UniProtKB/Swiss-Prot
  ENSMUST00000107083.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CH-domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CH_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Hook-like_fam UniProtKB/Swiss-Prot
  HOOK_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:77963 UniProtKB/Swiss-Prot
MGD MGI:1925213 ENTREZGENE
NCBI Gene 77963 ENTREZGENE
PANTHER HOOK PROTEINS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN HOOK HOMOLOG 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HOOK UniProtKB/Swiss-Prot
  HOOK_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Hook1 PhenoGen
PROSITE PS50021 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Hook domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt HOOK1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8BIZ2 ENTREZGENE
  Q8BJ23_MOUSE UniProtKB/TrEMBL
  Q8K0P1 ENTREZGENE
  Q8K454 ENTREZGENE
  Q9CTN6 ENTREZGENE
UniProt Secondary Q8BIZ2 UniProtKB/Swiss-Prot
  Q8K0P1 UniProtKB/Swiss-Prot
  Q8K454 UniProtKB/Swiss-Prot
  Q9CTN6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-29 Hook1  hook microtubule tethering protein 1    hook homolog 1 (Drosophila)  Symbol and/or name change 5135510 APPROVED