BNC1 (basonuclin zinc finger protein 1) - Rat Genome Database

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Gene: BNC1 (basonuclin zinc finger protein 1) Homo sapiens
Analyze
Symbol: BNC1
Name: basonuclin zinc finger protein 1
RGD ID: 1319162
HGNC Page HGNC:1081
Description: Enables DNA-binding transcription activator activity and rDNA binding activity. Involved in positive regulation of oocyte maturation and positive regulation of transcription by RNA polymerase I. Located in nucleoplasm. Implicated in primary ovarian insufficiency 16.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: basonuclin 1; bn1; BNC; BSN1; HsT19447; POF16; zinc finger protein basonuclin; zinc finger protein basonuclin-1
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381583,255,884 - 83,284,664 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1583,255,884 - 83,284,664 (-)EnsemblGRCh38hg38GRCh38
GRCh371583,924,636 - 83,953,416 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361581,715,659 - 81,744,472 (-)NCBINCBI36Build 36hg18NCBI36
Build 341581,715,658 - 81,744,472NCBI
Celera1560,632,983 - 60,659,894 (+)NCBICelera
Cytogenetic Map15q25.2NCBI
HuRef1560,188,348 - 60,215,945 (-)NCBIHuRef
CHM1_11583,666,114 - 83,694,927 (-)NCBICHM1_1
T2T-CHM13v2.01581,123,798 - 81,152,590 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
nucleolus  (ISS)
nucleoplasm  (IDA,IEA)
nucleus  (IBA,IDA,IEA,TAS)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1332044   PMID:8034748   PMID:9099851   PMID:9151672   PMID:9223293   PMID:9687312   PMID:9727087   PMID:10449744   PMID:10462520   PMID:10524234   PMID:10839715   PMID:11076863  
PMID:11152639   PMID:11802773   PMID:12477932   PMID:15146197   PMID:15694340   PMID:16344560   PMID:16891417   PMID:19274049   PMID:19430199   PMID:20154727   PMID:20484983   PMID:20531302  
PMID:21741828   PMID:21873635   PMID:23707421   PMID:24088737   PMID:24454902   PMID:24662832   PMID:26821013   PMID:30010909   PMID:30021884   PMID:31065688   PMID:31767620   PMID:33961781  
PMID:34148047   PMID:34644201   PMID:36198708  


Genomics

Comparative Map Data
BNC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381583,255,884 - 83,284,664 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1583,255,884 - 83,284,664 (-)EnsemblGRCh38hg38GRCh38
GRCh371583,924,636 - 83,953,416 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361581,715,659 - 81,744,472 (-)NCBINCBI36Build 36hg18NCBI36
Build 341581,715,658 - 81,744,472NCBI
Celera1560,632,983 - 60,659,894 (+)NCBICelera
Cytogenetic Map15q25.2NCBI
HuRef1560,188,348 - 60,215,945 (-)NCBIHuRef
CHM1_11583,666,114 - 83,694,927 (-)NCBICHM1_1
T2T-CHM13v2.01581,123,798 - 81,152,590 (-)NCBIT2T-CHM13v2.0
Bnc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39781,616,401 - 81,642,047 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl781,616,401 - 81,642,055 (-)EnsemblGRCm39 Ensembl
GRCm38781,966,657 - 81,992,299 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl781,966,653 - 81,992,307 (-)EnsemblGRCm38mm10GRCm38
MGSCv37789,111,548 - 89,137,185 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36781,840,344 - 81,865,759 (-)NCBIMGSCv36mm8
Celera779,379,525 - 79,405,162 (-)NCBICelera
Cytogenetic Map7D3NCBI
cM Map745.71NCBI
Bnc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81145,326,881 - 145,352,534 (-)NCBIGRCr8
mRatBN7.21135,917,676 - 135,943,333 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1135,917,687 - 135,943,333 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1143,839,173 - 143,864,883 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01151,008,397 - 151,034,107 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01143,915,669 - 143,941,382 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01143,869,440 - 143,878,077 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01143,793,280 - 143,818,748 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1143,793,064 - 143,818,706 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01144,808,480 - 144,817,117 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01144,734,051 - 144,759,452 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41138,189,334 - 138,201,795 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11138,269,498 - 138,280,219 (-)NCBI
Celera1127,967,966 - 127,993,622 (-)NCBICelera
Cytogenetic Map1q31NCBI
Bnc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541613,428,760 - 13,440,921 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541613,428,760 - 13,440,837 (+)NCBIChiLan1.0ChiLan1.0
BNC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21672,603,533 - 72,632,390 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11576,765,127 - 76,792,466 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01562,316,229 - 62,345,123 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11581,146,417 - 81,174,007 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1581,146,417 - 81,174,007 (-)Ensemblpanpan1.1panPan2
BNC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1355,040,538 - 55,068,223 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl355,040,704 - 55,068,974 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha357,679,397 - 57,706,864 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0355,452,369 - 55,479,839 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl355,452,393 - 55,480,041 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1354,977,712 - 55,005,171 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0355,187,285 - 55,214,745 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0355,524,403 - 55,552,090 (-)NCBIUU_Cfam_GSD_1.0
Bnc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640128,422,595 - 128,434,352 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648317,900,189 - 17,911,948 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648317,900,189 - 17,911,925 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BNC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl751,652,542 - 51,679,775 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1751,651,179 - 51,679,781 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2757,139,471 - 57,168,062 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BNC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1292,331,958 - 2,360,832 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl292,349,650 - 2,360,804 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605944,740,636 - 44,766,600 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bnc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476819,013,480 - 19,024,025 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476819,011,971 - 19,035,717 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in BNC1
59 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 15q25.2(chr15:82558402-84121082)x3 copy number gain See cases [RCV000051826] Chr15:82558402..84121082 [GRCh38]
Chr15:83214012..84789834 [GRCh37]
Chr15:81011067..82580838 [NCBI36]
Chr15:15q25.2		 pathogenic
GRCh38/hg38 15q24.2-26.3(chr15:75307767-101723215)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052346]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052346]|See cases [RCV000052346] Chr15:75307767..101723215 [GRCh38]
Chr15:75600108..102263418 [GRCh37]
Chr15:73387161..100080941 [NCBI36]
Chr15:15q24.2-26.3		 pathogenic
GRCh38/hg38 15q24.3-26.3(chr15:77543797-101843411)x3 copy number gain See cases [RCV000052347] Chr15:77543797..101843411 [GRCh38]
Chr15:77836139..102383614 [GRCh37]
Chr15:75623194..100201137 [NCBI36]
Chr15:15q24.3-26.3		 pathogenic
NM_001717.3(BNC1):c.1576G>A (p.Glu526Lys) single nucleotide variant Malignant melanoma [RCV000070920] Chr15:83263675 [GRCh38]
Chr15:83932427 [GRCh37]
Chr15:81723431 [NCBI36]
Chr15:15q25.2		 not provided
NM_001717.3(BNC1):c.955C>T (p.His319Tyr) single nucleotide variant Malignant melanoma [RCV000070921] Chr15:83264296 [GRCh38]
Chr15:83933048 [GRCh37]
Chr15:81724052 [NCBI36]
Chr15:15q25.2		 not provided
NM_001717.4(BNC1):c.2917C>T (p.Arg973Ter) single nucleotide variant Premature ovarian failure 16 [RCV001331894] Chr15:83257510 [GRCh38]
Chr15:83926262 [GRCh37]
Chr15:15q25.2		 uncertain significance
GRCh38/hg38 15q25.2(chr15:83101364-83291966)x1 copy number loss See cases [RCV000137020] Chr15:83101364..83291966 [GRCh38]
Chr15:83770116..83960718 [GRCh37]
Chr15:81561120..81751722 [NCBI36]
Chr15:15q25.2		 benign
GRCh38/hg38 15q25.2-26.3(chr15:82859676-101810992)x3 copy number gain See cases [RCV000136849] Chr15:82859676..101810992 [GRCh38]
Chr15:83528428..102351195 [GRCh37]
Chr15:81325482..100168718 [NCBI36]
Chr15:15q25.2-26.3		 pathogenic
GRCh38/hg38 15q25.2-25.3(chr15:82560915-85185613)x1 copy number loss See cases [RCV000137052] Chr15:82560915..85185613 [GRCh38]
Chr15:83229665..85728844 [GRCh37]
Chr15:81026720..83529848 [NCBI36]
Chr15:15q25.2-25.3		 likely pathogenic|uncertain significance
GRCh38/hg38 15q22.2-26.3(chr15:59828460-101920998)x3 copy number gain See cases [RCV000142915] Chr15:59828460..101920998 [GRCh38]
Chr15:60120659..102461201 [GRCh37]
Chr15:57907951..100278724 [NCBI36]
Chr15:15q22.2-26.3		 pathogenic
GRCh38/hg38 15q23-26.3(chr15:72154949-101920998)x3 copy number gain See cases [RCV000143019] Chr15:72154949..101920998 [GRCh38]
Chr15:72447290..102461201 [GRCh37]
Chr15:70234344..100278724 [NCBI36]
Chr15:15q23-26.3		 pathogenic
GRCh38/hg38 15q25.2-25.3(chr15:82627214-85243616)x1 copy number loss See cases [RCV000143125] Chr15:82627214..85243616 [GRCh38]
Chr15:83083418..85786847 [GRCh37]
Chr15:80880473..83587851 [NCBI36]
Chr15:15q25.2-25.3		 likely pathogenic
GRCh37/hg19 15q25.2(chr15:83213963-84811815)x1 copy number loss Premature ovarian failure [RCV000225327] Chr15:83213963..84811815 [GRCh37]
Chr15:15q25.2		 likely pathogenic
GRCh37/hg19 15q24.2-26.3(chr15:76061144-102429112)x3 copy number gain See cases [RCV000511332] Chr15:76061144..102429112 [GRCh37]
Chr15:15q24.2-26.3		 pathogenic
GRCh37/hg19 15q22.31-26.3(chr15:64637227-102509910)x3 copy number gain See cases [RCV000240602] Chr15:64637227..102509910 [GRCh37]
Chr15:15q22.31-26.3		 pathogenic
GRCh37/hg19 15q22.1-26.3(chr15:59297293-102480888)x3 copy number gain not provided [RCV000415836] Chr15:59297293..102480888 [GRCh37]
Chr15:15q22.1-26.3		 likely pathogenic
GRCh37/hg19 15q25.1-25.2(chr15:80703867-83955596)x1 copy number loss See cases [RCV000446990] Chr15:80703867..83955596 [GRCh37]
Chr15:15q25.1-25.2		 pathogenic
GRCh37/hg19 15q15.1-26.3(chr15:41745084-102354798)x4 copy number gain See cases [RCV000447123] Chr15:41745084..102354798 [GRCh37]
Chr15:15q15.1-26.3		 pathogenic
GRCh37/hg19 15q25.1-26.3(chr15:80648093-102429112)x3 copy number gain See cases [RCV000445705] Chr15:80648093..102429112 [GRCh37]
Chr15:15q25.1-26.3		 pathogenic
GRCh37/hg19 15q11.2-26.3(chr15:20733395-102511616)x4 copy number gain See cases [RCV000447765] Chr15:20733395..102511616 [GRCh37]
Chr15:15q11.2-26.3		 pathogenic
GRCh37/hg19 15q25.2(chr15:83679705-84450756)x3 copy number gain See cases [RCV000448403] Chr15:83679705..84450756 [GRCh37]
Chr15:15q25.2		 uncertain significance
GRCh37/hg19 15q25.2(chr15:83169558-84847653)x1 copy number loss See cases [RCV000510435] Chr15:83169558..84847653 [GRCh37]
Chr15:15q25.2		 likely pathogenic
GRCh37/hg19 15q11.2-26.3(chr15:22770422-102429112)x3 copy number gain See cases [RCV000510717] Chr15:22770422..102429112 [GRCh37]
Chr15:15q11.2-26.3		 pathogenic
GRCh37/hg19 15q11.2-26.3(chr15:22770422-102429112) copy number gain See cases [RCV000512019] Chr15:22770422..102429112 [GRCh37]
Chr15:15q11.2-26.3		 pathogenic
Single allele duplication not provided [RCV000677926] Chr15:31115047..102354857 [GRCh37]
Chr15:15q13.2-26.3		 pathogenic
NM_001717.4(BNC1):c.1831C>A (p.Arg611Ser) single nucleotide variant not specified [RCV004320141] Chr15:83263420 [GRCh38]
Chr15:83932172 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1069G>A (p.Val357Met) single nucleotide variant not specified [RCV004303309] Chr15:83264182 [GRCh38]
Chr15:83932934 [GRCh37]
Chr15:15q25.2		 uncertain significance
GRCh37/hg19 15q25.2(chr15:82606408-84970771)x3 copy number gain See cases [RCV000512491] Chr15:82606408..84970771 [GRCh37]
Chr15:15q25.2		 uncertain significance
GRCh37/hg19 15q25.1-25.3(chr15:79023343-87158823)x1,2 copy number gain not provided [RCV000683712] Chr15:79023343..87158823 [GRCh37]
Chr15:15q25.1-25.3		 pathogenic
GRCh37/hg19 15q23-26.3(chr15:71329220-102270758)x3 copy number gain not provided [RCV000683703] Chr15:71329220..102270758 [GRCh37]
Chr15:15q23-26.3		 pathogenic
GRCh37/hg19 15q24.3-26.3(chr15:77479244-102429112)x3 copy number gain not provided [RCV000683710] Chr15:77479244..102429112 [GRCh37]
Chr15:15q24.3-26.3		 pathogenic
NC_000015.9:g.83214012_84812693del1598682 deletion Primary amenorrhea [RCV000754462] Chr15:83214012..84812693 [GRCh37]
Chr15:15q25.2		 likely pathogenic
GRCh37/hg19 15q11.1-26.3(chr15:20016811-102493540)x3 copy number gain not provided [RCV000751155] Chr15:20016811..102493540 [GRCh37]
Chr15:15q11.1-26.3		 pathogenic
GRCh37/hg19 15q11.1-26.3(chr15:20071673-102461162)x3 copy number gain not provided [RCV000751156] Chr15:20071673..102461162 [GRCh37]
Chr15:15q11.1-26.3		 pathogenic
NM_001717.4(BNC1):c.1065_1069del (p.Arg356fs) deletion Premature ovarian failure 16 [RCV000984865] Chr15:83264182..83264186 [GRCh38]
Chr15:83932934..83932938 [GRCh37]
Chr15:15q25.2		 pathogenic
NM_001717.4(BNC1):c.2359A>G (p.Ser787Gly) single nucleotide variant not provided [RCV000949803] Chr15:83258068 [GRCh38]
Chr15:83926820 [GRCh37]
Chr15:15q25.2		 benign
GRCh37/hg19 15q25.2-26.1(chr15:83883823-92165844) copy number loss not provided [RCV000767759] Chr15:83883823..92165844 [GRCh37]
Chr15:15q25.2-26.1		 pathogenic
GRCh37/hg19 15q25.2(chr15:83214012-84772030)x1 copy number loss not provided [RCV000856636] Chr15:83214012..84772030 [GRCh37]
Chr15:15q25.2		 pathogenic
NM_001717.4(BNC1):c.2284C>T (p.Arg762Cys) single nucleotide variant not specified [RCV004300184] Chr15:83262967 [GRCh38]
Chr15:83931719 [GRCh37]
Chr15:15q25.2		 uncertain significance
GRCh37/hg19 15q25.2(chr15:82688216-84796779)x1 copy number loss not provided [RCV000848551] Chr15:82688216..84796779 [GRCh37]
Chr15:15q25.2		 pathogenic
GRCh37/hg19 15q25.2(chr15:82468371-84797068)x3 copy number gain not provided [RCV000846337] Chr15:82468371..84797068 [GRCh37]
Chr15:15q25.2		 uncertain significance
GRCh37/hg19 15q25.1-25.2(chr15:80728654-84107646)x1 copy number loss not provided [RCV000849378] Chr15:80728654..84107646 [GRCh37]
Chr15:15q25.1-25.2		 pathogenic
NM_001717.4(BNC1):c.1319G>C (p.Cys440Ser) single nucleotide variant not specified [RCV004319056] Chr15:83263932 [GRCh38]
Chr15:83932684 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.576C>T (p.Ser192=) single nucleotide variant not provided [RCV000907857] Chr15:83264675 [GRCh38]
Chr15:83933427 [GRCh37]
Chr15:15q25.2		 benign
GRCh37/hg19 15q25.2-25.3(chr15:83201955-85786847)x1 copy number loss not provided [RCV001259716] Chr15:83201955..85786847 [GRCh37]
Chr15:15q25.2-25.3		 pathogenic
NC_000015.9:g.(?_32964879)_(91358519_?)dup duplication Bloom syndrome [RCV001343104]|Familial colorectal cancer [RCV001325176] Chr15:32964879..91358519 [GRCh37]
Chr15:15q13.3-26.1		 uncertain significance
NM_001717.4(BNC1):c.2273C>T (p.Thr758Ile) single nucleotide variant Premature ovarian failure [RCV001270232] Chr15:83262978 [GRCh38]
Chr15:83931730 [GRCh37]
Chr15:15q25.2		 likely pathogenic
NM_001717.4(BNC1):c.571C>A (p.Gln191Lys) single nucleotide variant not specified [RCV004078112] Chr15:83264680 [GRCh38]
Chr15:83933432 [GRCh37]
Chr15:15q25.2		 uncertain significance
GRCh37/hg19 15q24.3-26.3(chr15:77512817-102035027)x3 copy number gain not provided [RCV002475797] Chr15:77512817..102035027 [GRCh37]
Chr15:15q24.3-26.3		 pathogenic
NM_001717.4(BNC1):c.2078C>T (p.Ala693Val) single nucleotide variant not specified [RCV004162559] Chr15:83263173 [GRCh38]
Chr15:83931925 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1925T>C (p.Leu642Ser) single nucleotide variant Premature ovarian failure 16 [RCV003333808]|not specified [RCV004189999] Chr15:83263326 [GRCh38]
Chr15:83932078 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2155C>T (p.Arg719Cys) single nucleotide variant not specified [RCV004111624] Chr15:83263096 [GRCh38]
Chr15:83931848 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1657A>G (p.Ile553Val) single nucleotide variant not specified [RCV004089211] Chr15:83263594 [GRCh38]
Chr15:83932346 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1855G>A (p.Gly619Arg) single nucleotide variant not specified [RCV004104154] Chr15:83263396 [GRCh38]
Chr15:83932148 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.70C>T (p.Arg24Trp) single nucleotide variant not specified [RCV004206711] Chr15:83284559 [GRCh38]
Chr15:83953311 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1753C>T (p.His585Tyr) single nucleotide variant not specified [RCV004093086] Chr15:83263498 [GRCh38]
Chr15:83932250 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1966C>T (p.His656Tyr) single nucleotide variant not specified [RCV004216110] Chr15:83263285 [GRCh38]
Chr15:83932037 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.680C>G (p.Pro227Arg) single nucleotide variant not specified [RCV004140208] Chr15:83264571 [GRCh38]
Chr15:83933323 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.705C>G (p.Asn235Lys) single nucleotide variant not specified [RCV004078354] Chr15:83264546 [GRCh38]
Chr15:83933298 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1829A>G (p.His610Arg) single nucleotide variant not specified [RCV004210865] Chr15:83263422 [GRCh38]
Chr15:83932174 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.47C>T (p.Ala16Val) single nucleotide variant not specified [RCV004069815] Chr15:83284582 [GRCh38]
Chr15:83953334 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1031A>T (p.Lys344Met) single nucleotide variant not specified [RCV004178593] Chr15:83264220 [GRCh38]
Chr15:83932972 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1507A>G (p.Asn503Asp) single nucleotide variant not specified [RCV004167499] Chr15:83263744 [GRCh38]
Chr15:83932496 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2551A>G (p.Ser851Gly) single nucleotide variant not specified [RCV004174318] Chr15:83257876 [GRCh38]
Chr15:83926628 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1821G>T (p.Arg607Ser) single nucleotide variant not specified [RCV004131773] Chr15:83263430 [GRCh38]
Chr15:83932182 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.712A>G (p.Ser238Gly) single nucleotide variant not specified [RCV004092931] Chr15:83264539 [GRCh38]
Chr15:83933291 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2751G>C (p.Gln917His) single nucleotide variant not specified [RCV004094357] Chr15:83257676 [GRCh38]
Chr15:83926428 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.154A>T (p.Asn52Tyr) single nucleotide variant not specified [RCV004271574] Chr15:83268178 [GRCh38]
Chr15:83936930 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2030G>A (p.Arg677His) single nucleotide variant not specified [RCV004256796] Chr15:83263221 [GRCh38]
Chr15:83931973 [GRCh37]
Chr15:15q25.2		 likely benign
NM_001717.4(BNC1):c.2468G>C (p.Gly823Ala) single nucleotide variant not specified [RCV004260265] Chr15:83257959 [GRCh38]
Chr15:83926711 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1961A>G (p.His654Arg) single nucleotide variant not specified [RCV004253502] Chr15:83263290 [GRCh38]
Chr15:83932042 [GRCh37]
Chr15:15q25.2		 likely benign
NM_001717.4(BNC1):c.2723T>G (p.Ile908Ser) single nucleotide variant not specified [RCV004268010] Chr15:83257704 [GRCh38]
Chr15:83926456 [GRCh37]
Chr15:15q25.2		 uncertain significance
GRCh37/hg19 15q22.33-26.1(chr15:67358491-91644328)x3 copy number gain not provided [RCV003222839] Chr15:67358491..91644328 [GRCh37]
Chr15:15q22.33-26.1		 pathogenic
NM_001717.4(BNC1):c.559G>A (p.Glu187Lys) single nucleotide variant not specified [RCV004253287] Chr15:83264692 [GRCh38]
Chr15:83933444 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2857C>T (p.Arg953Trp) single nucleotide variant not specified [RCV004285097] Chr15:83257570 [GRCh38]
Chr15:83926322 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2846C>T (p.Thr949Ile) single nucleotide variant not specified [RCV004309990] Chr15:83257581 [GRCh38]
Chr15:83926333 [GRCh37]
Chr15:15q25.2		 uncertain significance
GRCh37/hg19 15q24.1-26.3(chr15:75165490-102520892)x3 copy number gain See cases [RCV003329502] Chr15:75165490..102520892 [GRCh37]
Chr15:15q24.1-26.3		 pathogenic
NM_001717.4(BNC1):c.791A>G (p.Tyr264Cys) single nucleotide variant not specified [RCV004345345] Chr15:83264460 [GRCh38]
Chr15:83933212 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1433T>C (p.Leu478Pro) single nucleotide variant not specified [RCV004346583] Chr15:83263818 [GRCh38]
Chr15:83932570 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2590A>T (p.Met864Leu) single nucleotide variant not specified [RCV004355277] Chr15:83257837 [GRCh38]
Chr15:83926589 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.38C>T (p.Ala13Val) single nucleotide variant not specified [RCV004342717] Chr15:83284591 [GRCh38]
Chr15:83953343 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2552G>A (p.Ser851Asn) single nucleotide variant not specified [RCV004360052] Chr15:83257875 [GRCh38]
Chr15:83926627 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.974C>T (p.Ser325Leu) single nucleotide variant not specified [RCV004358644] Chr15:83264277 [GRCh38]
Chr15:83933029 [GRCh37]
Chr15:15q25.2		 uncertain significance
GRCh37/hg19 15q25.2(chr15:83220107-84811774)x1 copy number loss not provided [RCV003483243] Chr15:83220107..84811774 [GRCh37]
Chr15:15q25.2		 pathogenic
GRCh37/hg19 15q25.2-25.3(chr15:83169558-85779567)x3 copy number gain not provided [RCV003485074] Chr15:83169558..85779567 [GRCh37]
Chr15:15q25.2-25.3		 uncertain significance
NM_001717.4(BNC1):c.2568G>C (p.Leu856=) single nucleotide variant not provided [RCV003400990] Chr15:83257859 [GRCh38]
Chr15:83926611 [GRCh37]
Chr15:15q25.2		 likely benign
NM_001717.4(BNC1):c.42C>T (p.Ala14=) single nucleotide variant not provided [RCV003400991] Chr15:83284587 [GRCh38]
Chr15:83953339 [GRCh37]
Chr15:15q25.2		 likely benign
NM_001717.4(BNC1):c.1043A>G (p.Asn348Ser) single nucleotide variant not provided [RCV003411208] Chr15:83264208 [GRCh38]
Chr15:83932960 [GRCh37]
Chr15:15q25.2		 likely benign
NM_001717.4(BNC1):c.621_637del (p.Phe207fs) deletion Male infertility with azoospermia or oligozoospermia due to single gene mutation [RCV003991643] Chr15:83264614..83264630 [GRCh38]
Chr15:83933366..83933382 [GRCh37]
Chr15:15q25.2		 likely pathogenic
NM_001717.4(BNC1):c.1874_1875del (p.Pro625fs) deletion Male infertility with azoospermia or oligozoospermia due to single gene mutation [RCV003991644] Chr15:83263376..83263377 [GRCh38]
Chr15:83932128..83932129 [GRCh37]
Chr15:15q25.2		 likely pathogenic
NM_001717.4(BNC1):c.2374C>T (p.Arg792Cys) single nucleotide variant not specified [RCV004433978] Chr15:83258053 [GRCh38]
Chr15:83926805 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2968C>G (p.Pro990Ala) single nucleotide variant not specified [RCV004433981] Chr15:83257459 [GRCh38]
Chr15:83926211 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.363A>C (p.Gln121His) single nucleotide variant not specified [RCV004433982] Chr15:83266908 [GRCh38]
Chr15:83935660 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.625G>A (p.Glu209Lys) single nucleotide variant not specified [RCV004433984] Chr15:83264626 [GRCh38]
Chr15:83933378 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1568T>G (p.Ile523Ser) single nucleotide variant not specified [RCV004433974] Chr15:83263683 [GRCh38]
Chr15:83932435 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.227T>C (p.Met76Thr) single nucleotide variant not specified [RCV004433977] Chr15:83267044 [GRCh38]
Chr15:83935796 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2387T>C (p.Leu796Pro) single nucleotide variant not specified [RCV004433979] Chr15:83258040 [GRCh38]
Chr15:83926792 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.566A>G (p.Glu189Gly) single nucleotide variant not specified [RCV004433983] Chr15:83264685 [GRCh38]
Chr15:83933437 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.749A>G (p.Asn250Ser) single nucleotide variant not specified [RCV004433985] Chr15:83264502 [GRCh38]
Chr15:83933254 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.174A>C (p.Gln58His) single nucleotide variant not specified [RCV004433975] Chr15:83268158 [GRCh38]
Chr15:83936910 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2143A>G (p.Ile715Val) single nucleotide variant not specified [RCV004433976] Chr15:83263108 [GRCh38]
Chr15:83931860 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2902T>G (p.Ser968Ala) single nucleotide variant not specified [RCV004433980] Chr15:83257525 [GRCh38]
Chr15:83926277 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.23G>A (p.Arg8Gln) single nucleotide variant not specified [RCV004600573] Chr15:83284606 [GRCh38]
Chr15:83953358 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1831C>G (p.Arg611Gly) single nucleotide variant not specified [RCV004600576] Chr15:83263420 [GRCh38]
Chr15:83932172 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.578T>A (p.Ile193Asn) single nucleotide variant not specified [RCV004600575] Chr15:83264673 [GRCh38]
Chr15:83933425 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1786G>A (p.Gly596Arg) single nucleotide variant not specified [RCV004600577] Chr15:83263465 [GRCh38]
Chr15:83932217 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.1886C>T (p.Thr629Ile) single nucleotide variant not specified [RCV004600582] Chr15:83263365 [GRCh38]
Chr15:83932117 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2068A>G (p.Arg690Gly) single nucleotide variant not specified [RCV004600579] Chr15:83263183 [GRCh38]
Chr15:83931935 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.784G>A (p.Glu262Lys) single nucleotide variant not specified [RCV004600578] Chr15:83264467 [GRCh38]
Chr15:83933219 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.847C>T (p.Pro283Ser) single nucleotide variant not specified [RCV004600574] Chr15:83264404 [GRCh38]
Chr15:83933156 [GRCh37]
Chr15:15q25.2		 uncertain significance
NM_001717.4(BNC1):c.2117T>C (p.Val706Ala) single nucleotide variant not specified [RCV004600581] Chr15:83263134 [GRCh38]
Chr15:83931886 [GRCh37]
Chr15:15q25.2		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:652
Count of miRNA genes:506
Interacting mature miRNAs:553
Transcripts:ENST00000345382, ENST00000569704
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407414776GWAS1063752_Hdiastolic blood pressure QTL GWAS1063752 (human)2e-11diastolic blood pressurediastolic blood pressure (CMO:0000005)158328071883280719Human
406970017GWAS618993_Hcannabis dependence QTL GWAS618993 (human)2e-08cannabis dependence158328099983281000Human
406975541GWAS624517_Hsmoking initiation QTL GWAS624517 (human)2e-12smoking initiation158326173483261735Human
407173549GWAS822525_Hattention deficit hyperactivity disorder, substance abuse, antisocial behaviour measurement QTL GWAS822525 (human)9e-12attention deficit hyperactivity disorder, substance abuse, antisocial behaviour measurement158328338683283387Human

Markers in Region
D15S670  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371583,937,257 - 83,937,360UniSTSGRCh37
Build 361581,728,261 - 81,728,364RGDNCBI36
Celera1560,649,127 - 60,649,230RGD
Cytogenetic Map15q25.2UniSTS
HuRef1560,201,094 - 60,201,197UniSTS
Whitehead-YAC Contig Map15 UniSTS
BNC1__4457  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371583,924,483 - 83,925,405UniSTSGRCh37
Build 361581,715,487 - 81,716,409RGDNCBI36
HuRef1560,188,176 - 60,189,098UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
1197 2230 2550 2001 4261 1533 2046 4 482 905 323 2203 5600 5169 35 3058 736 1632 1464 173 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001301206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011521893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011521894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054378620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054378621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC103876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH005176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI921950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK302992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN260997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB051299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HY045483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT585120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L03427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000345382   ⟹   ENSP00000307041
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1583,255,884 - 83,284,664 (-)Ensembl
Ensembl Acc Id: ENST00000569704   ⟹   ENSP00000456727
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1583,255,884 - 83,283,457 (-)Ensembl
RefSeq Acc Id: NM_001301206   ⟹   NP_001288135
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381583,255,884 - 83,283,457 (-)NCBI
CHM1_11583,666,114 - 83,693,668 (-)NCBI
T2T-CHM13v2.01581,123,798 - 81,151,383 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001717   ⟹   NP_001708
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381583,255,884 - 83,284,664 (-)NCBI
GRCh371583,924,655 - 83,953,468 (-)ENTREZGENE
Build 361581,715,659 - 81,744,472 (-)NCBI Archive
HuRef1560,188,348 - 60,215,945 (-)ENTREZGENE
CHM1_11583,666,114 - 83,694,927 (-)NCBI
T2T-CHM13v2.01581,123,798 - 81,152,590 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011521893   ⟹   XP_011520195
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381583,255,884 - 83,284,095 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011521894   ⟹   XP_011520196
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381583,255,884 - 83,266,921 (-)NCBI
Sequence:
RefSeq Acc Id: XM_054378620   ⟹   XP_054234595
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01581,123,798 - 81,152,031 (-)NCBI
RefSeq Acc Id: XM_054378621   ⟹   XP_054234596
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01581,123,798 - 81,134,836 (-)NCBI
RefSeq Acc Id: NP_001708   ⟸   NM_001717
- Peptide Label: isoform a
- UniProtKB: Q15840 (UniProtKB/Swiss-Prot),   Q01954 (UniProtKB/Swiss-Prot),   B7Z885 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001288135   ⟸   NM_001301206
- Peptide Label: isoform b
- UniProtKB: B7Z885 (UniProtKB/TrEMBL),   F5GY04 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011520195   ⟸   XM_011521893
- Peptide Label: isoform X1
- UniProtKB: B7Z885 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011520196   ⟸   XM_011521894
- Peptide Label: isoform X2
- UniProtKB: B7Z885 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000456727   ⟸   ENST00000569704
Ensembl Acc Id: ENSP00000307041   ⟸   ENST00000345382
RefSeq Acc Id: XP_054234595   ⟸   XM_054378620
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054234596   ⟸   XM_054378621
- Peptide Label: isoform X2
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q01954-F1-model_v2 AlphaFold Q01954 1-994 view protein structure

Promoters
RGD ID:7230375
Promoter ID:EPDNEW_H20933
Type:initiation region
Name:BNC1_1
Description:basonuclin 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381583,284,664 - 83,284,724EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:1081 AgrOrtholog
COSMIC BNC1 COSMIC
Ensembl Genes ENSG00000169594 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000345382 ENTREZGENE
  ENST00000345382.7 UniProtKB/Swiss-Prot
  ENST00000569704 ENTREZGENE
  ENST00000569704.2 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000169594 GTEx
HGNC ID HGNC:1081 ENTREZGENE
Human Proteome Map BNC1 Human Proteome Map
InterPro Disconnected-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:646 UniProtKB/Swiss-Prot
NCBI Gene 646 ENTREZGENE
OMIM 601930 OMIM
PANTHER PTHR15021 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC FINGER PROTEIN BASONUCLIN-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-met UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA25391 PharmGKB
PROSITE PROKAR_LIPOPROTEIN UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B7Z885 ENTREZGENE, UniProtKB/TrEMBL
  BNC1_HUMAN UniProtKB/Swiss-Prot
  F5GY04 ENTREZGENE, UniProtKB/TrEMBL
  Q01954 ENTREZGENE
  Q15840 ENTREZGENE
UniProt Secondary Q15840 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-06-05 BNC1  basonuclin zinc finger protein 1  BNC1  basonuclin 1  Symbol and/or name change 19259463 PROVISIONAL