MRPL55 (mitochondrial ribosomal protein L55) - Rat Genome Database

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Gene: MRPL55 (mitochondrial ribosomal protein L55) Homo sapiens
Analyze
Symbol: MRPL55
Name: mitochondrial ribosomal protein L55
RGD ID: 1317775
HGNC Page HGNC:16686
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Located in mitochondrion. Part of mitochondrial large ribosomal subunit.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: 39S ribosomal protein L55, mitochondrial; AAVG5835; bL31m; DKFZp686D1387; L55mt; L55nt; large ribosomal subunit protein mL55; MGC61802; mitochondrial large ribosomal subunit protein bL31m; mitochondrial large ribosomal subunit protein mL55; MRP-L55; PRO19675
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381228,106,685 - 228,109,299 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1228,106,679 - 228,109,312 (-)EnsemblGRCh38hg38GRCh38
GRCh371228,294,386 - 228,297,000 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361226,361,003 - 226,363,627 (-)NCBINCBI36Build 36hg18NCBI36
Celera1201,484,612 - 201,487,245 (-)NCBICelera
Cytogenetic Map1q42.13NCBI
HuRef1198,809,501 - 198,812,134 (-)NCBIHuRef
CHM1_11229,566,725 - 229,569,358 (-)NCBICHM1_1
T2T-CHM13v2.01227,295,671 - 227,315,175 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10737800   PMID:11551941   PMID:11943462   PMID:12477932   PMID:12706105   PMID:12975309   PMID:14702039   PMID:15489334   PMID:16710414   PMID:17207965   PMID:17567985  
PMID:20186120   PMID:20877624   PMID:21873635   PMID:22939629   PMID:25278503   PMID:26186194   PMID:26344197   PMID:26496610   PMID:27023846   PMID:28514442   PMID:28892042   PMID:29229926  
PMID:29491746   PMID:29540532   PMID:29568061   PMID:29802200   PMID:29845934   PMID:31056398   PMID:31617661   PMID:31822558   PMID:31871319   PMID:31980649   PMID:32628020   PMID:32877691  
PMID:33306668   PMID:33961781   PMID:34079125   PMID:34800366   PMID:35013218   PMID:35748872   PMID:35831314   PMID:35944360   PMID:35973513   PMID:36244648   PMID:36537216   PMID:37024974  
PMID:37071682   PMID:38697112  


Genomics

Comparative Map Data
MRPL55
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381228,106,685 - 228,109,299 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1228,106,679 - 228,109,312 (-)EnsemblGRCh38hg38GRCh38
GRCh371228,294,386 - 228,297,000 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361226,361,003 - 226,363,627 (-)NCBINCBI36Build 36hg18NCBI36
Celera1201,484,612 - 201,487,245 (-)NCBICelera
Cytogenetic Map1q42.13NCBI
HuRef1198,809,501 - 198,812,134 (-)NCBIHuRef
CHM1_11229,566,725 - 229,569,358 (-)NCBICHM1_1
T2T-CHM13v2.01227,295,671 - 227,315,175 (-)NCBIT2T-CHM13v2.0
Mrpl55
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391159,093,312 - 59,096,964 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1159,093,312 - 59,096,960 (+)EnsemblGRCm39 Ensembl
GRCm381159,202,486 - 59,206,138 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1159,202,486 - 59,206,134 (+)EnsemblGRCm38mm10GRCm38
MGSCv371159,016,019 - 59,019,504 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361159,018,712 - 59,022,197 (+)NCBIMGSCv36mm8
Celera1163,967,585 - 63,971,075 (+)NCBICelera
Cytogenetic Map11B1.3NCBI
cM Map1137.05NCBI
Mrpl55
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81044,488,252 - 44,491,401 (+)NCBIGRCr8
mRatBN7.21043,988,676 - 43,991,841 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1043,988,683 - 43,991,841 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1048,682,503 - 48,685,658 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01048,172,861 - 48,176,016 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01043,676,458 - 43,679,613 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01045,552,794 - 45,555,943 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1045,552,795 - 45,555,943 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01045,308,861 - 45,312,028 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41045,506,262 - 45,509,410 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11045,519,887 - 45,522,767 (+)NCBI
Celera1043,251,943 - 43,255,091 (+)NCBICelera
Cytogenetic Map10q22NCBI
Mrpl55
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955581312,256 - 314,138 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955581312,256 - 314,138 (+)NCBIChiLan1.0ChiLan1.0
MRPL55
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2121,497,118 - 21,499,779 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1121,435,362 - 21,437,964 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01203,508,861 - 203,511,486 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11208,720,030 - 208,722,666 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1208,720,030 - 208,722,668 (-)Ensemblpanpan1.1panPan2
MRPL55
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.114826,731 - 830,107 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl14826,726 - 830,107 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha14321,627 - 324,914 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.014547,149 - 550,437 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl14547,182 - 550,435 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.114737,958 - 741,246 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.014518,782 - 522,069 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.014504,671 - 507,961 (+)NCBIUU_Cfam_GSD_1.0
Mrpl55
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721387,766,963 - 87,770,562 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936864108,645 - 111,838 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MRPL55
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl251,243,294 - 51,247,594 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1251,243,257 - 51,247,626 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2278,534,029 - 78,535,135 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MRPL55
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1251,618,831 - 1,621,460 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl251,619,917 - 1,621,385 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660551,500,040 - 1,502,647 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mrpl55
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624937878,596 - 881,003 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624937878,596 - 881,098 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MRPL55
7 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 1q32.3-44(chr1:214023812-248918469)x3 copy number gain See cases [RCV000050981] Chr1:214023812..248918469 [GRCh38]
Chr1:214197155..249212668 [GRCh37]
Chr1:212263778..247179291 [NCBI36]
Chr1:1q32.3-44		 pathogenic
GRCh38/hg38 1q41-44(chr1:223347693-248918469)x3 copy number gain See cases [RCV000050581] Chr1:223347693..248918469 [GRCh38]
Chr1:223521035..249212668 [GRCh37]
Chr1:221587658..247179291 [NCBI36]
Chr1:1q41-44		 pathogenic
GRCh38/hg38 1q41-44(chr1:221902539-248918469)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051875]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051875]|See cases [RCV000051875] Chr1:221902539..248918469 [GRCh38]
Chr1:222075881..249212668 [GRCh37]
Chr1:220142504..247179291 [NCBI36]
Chr1:1q41-44		 pathogenic
GRCh38/hg38 1q41-44(chr1:223828500-248891309)x3 copy number gain See cases [RCV000051878] Chr1:223828500..248891309 [GRCh38]
Chr1:224016202..249185508 [GRCh37]
Chr1:222082825..247152131 [NCBI36]
Chr1:1q41-44		 pathogenic
GRCh38/hg38 1q41-44(chr1:223887780-248891309)x3 copy number gain See cases [RCV000051880] Chr1:223887780..248891309 [GRCh38]
Chr1:224075482..249185508 [GRCh37]
Chr1:222142105..247152131 [NCBI36]
Chr1:1q41-44		 pathogenic
GRCh38/hg38 1q42.11-44(chr1:224096488-248918469)x3 copy number gain See cases [RCV000051882] Chr1:224096488..248918469 [GRCh38]
Chr1:224284190..249212668 [GRCh37]
Chr1:222350813..247179291 [NCBI36]
Chr1:1q42.11-44		 pathogenic
GRCh38/hg38 1q32.2-44(chr1:209646207-248931113)x3 copy number gain See cases [RCV000051861] Chr1:209646207..248931113 [GRCh38]
Chr1:209819552..249225312 [GRCh37]
Chr1:207886175..247191935 [NCBI36]
Chr1:1q32.2-44		 pathogenic
GRCh38/hg38 1q41-42.13(chr1:221519280-228862141)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053955]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053955]|See cases [RCV000053955] Chr1:221519280..228862141 [GRCh38]
Chr1:221692622..228997888 [GRCh37]
Chr1:219759245..227064511 [NCBI36]
Chr1:1q41-42.13		 pathogenic
GRCh38/hg38 1q32.2-44(chr1:209963625-248918469)x3 copy number gain See cases [RCV000134979] Chr1:209963625..248918469 [GRCh38]
Chr1:210136970..249212668 [GRCh37]
Chr1:208203593..247179291 [NCBI36]
Chr1:1q32.2-44		 pathogenic
GRCh38/hg38 1q42.13(chr1:227613596-229249335)x4 copy number gain See cases [RCV000134940] Chr1:227613596..229249335 [GRCh38]
Chr1:227801297..229385082 [GRCh37]
Chr1:225867920..227451705 [NCBI36]
Chr1:1q42.13		 likely pathogenic|uncertain significance
GRCh38/hg38 1q41-44(chr1:223815147-248918469)x3 copy number gain See cases [RCV000135839] Chr1:223815147..248918469 [GRCh38]
Chr1:224002849..249212668 [GRCh37]
Chr1:222069472..247179291 [NCBI36]
Chr1:1q41-44		 pathogenic
GRCh38/hg38 1q42.12-42.2(chr1:226185124-232872488)x1 copy number loss See cases [RCV000135796] Chr1:226185124..232872488 [GRCh38]
Chr1:226372825..233008234 [GRCh37]
Chr1:224439448..231074857 [NCBI36]
Chr1:1q42.12-42.2		 pathogenic
GRCh38/hg38 1q41-42.13(chr1:223347693-228556332)x1 copy number loss See cases [RCV000136636] Chr1:223347693..228556332 [GRCh38]
Chr1:223521035..228744033 [GRCh37]
Chr1:221587658..226810656 [NCBI36]
Chr1:1q41-42.13		 pathogenic
GRCh38/hg38 1q42.11-44(chr1:224022862-248918469)x3 copy number gain See cases [RCV000137769] Chr1:224022862..248918469 [GRCh38]
Chr1:224210564..249212668 [GRCh37]
Chr1:222277187..247179291 [NCBI36]
Chr1:1q42.11-44		 pathogenic
GRCh38/hg38 1q42.12-44(chr1:225438480-248787200)x3 copy number gain See cases [RCV000142448] Chr1:225438480..248787200 [GRCh38]
Chr1:225626182..249060210 [GRCh37]
Chr1:223692805..247048022 [NCBI36]
Chr1:1q42.12-44		 pathogenic
GRCh38/hg38 1q42.12-42.13(chr1:225382172-230418801)x1 copy number loss See cases [RCV000143223] Chr1:225382172..230418801 [GRCh38]
Chr1:225569874..230554547 [GRCh37]
Chr1:223636497..228621170 [NCBI36]
Chr1:1q42.12-42.13		 pathogenic
GRCh38/hg38 1q32.2-44(chr1:207346642-248930485)x3 copy number gain See cases [RCV000143727] Chr1:207346642..248930485 [GRCh38]
Chr1:207519987..249224684 [GRCh37]
Chr1:205586610..247191307 [NCBI36]
Chr1:1q32.2-44		 pathogenic
GRCh37/hg19 1q31.3-42.13(chr1:197811907-228997888)x3 copy number gain See cases [RCV000240137] Chr1:197811907..228997888 [GRCh37]
Chr1:1q31.3-42.13		 pathogenic
GRCh37/hg19 1q42.12-42.13(chr1:226871745-229906954)x1 copy number loss See cases [RCV000240001] Chr1:226871745..229906954 [GRCh37]
Chr1:1q42.12-42.13		 uncertain significance
GRCh37/hg19 1q31.3-44(chr1:195483439-249213000)x3 copy number gain See cases [RCV000449172] Chr1:195483439..249213000 [GRCh37]
Chr1:1q31.3-44		 pathogenic
GRCh37/hg19 1q41-44(chr1:214697099-249224684)x3 copy number gain See cases [RCV000449210] Chr1:214697099..249224684 [GRCh37]
Chr1:1q41-44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1q42.11-44(chr1:224105294-249224684)x3 copy number gain See cases [RCV000510981] Chr1:224105294..249224684 [GRCh37]
Chr1:1q42.11-44		 pathogenic
GRCh37/hg19 1q42.13(chr1:227774916-228335196)x3 copy number gain See cases [RCV000511279] Chr1:227774916..228335196 [GRCh37]
Chr1:1q42.13		 uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
NM_181463.3(MRPL55):c.127G>A (p.Val43Met) single nucleotide variant not specified [RCV004323803] Chr1:228107769 [GRCh38]
Chr1:228295470 [GRCh37]
Chr1:1q42.13		 uncertain significance
GRCh37/hg19 1q41-44(chr1:218252551-249224684)x3 copy number gain not provided [RCV000684700] Chr1:218252551..249224684 [GRCh37]
Chr1:1q41-44		 pathogenic
GRCh37/hg19 1q42.13(chr1:227696109-229152386)x3 copy number gain not provided [RCV000684706] Chr1:227696109..229152386 [GRCh37]
Chr1:1q42.13		 likely pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1q42.13(chr1:228260287-228617063)x1 copy number loss not provided [RCV000736887] Chr1:228260287..228617063 [GRCh37]
Chr1:1q42.13		 benign
GRCh37/hg19 1q41-42.2(chr1:223653722-234591807)x1 copy number loss not provided [RCV001005180] Chr1:223653722..234591807 [GRCh37]
Chr1:1q41-42.2		 pathogenic
GRCh37/hg19 1q42.13(chr1:228297613-228703236) copy number gain Aortic valve disease 1 [RCV000770940] Chr1:228297613..228703236 [GRCh37]
Chr1:1q42.13		 uncertain significance
GRCh37/hg19 1q42.13(chr1:228235107-228983659)x3 copy number gain not provided [RCV000848102] Chr1:228235107..228983659 [GRCh37]
Chr1:1q42.13		 uncertain significance
GRCh37/hg19 1q42.13(chr1:227772973-228326173)x3 copy number gain not provided [RCV000847140] Chr1:227772973..228326173 [GRCh37]
Chr1:1q42.13		 uncertain significance
GRCh37/hg19 1q25.3-44(chr1:182388773-249111240)x3 copy number gain not provided [RCV000845852] Chr1:182388773..249111240 [GRCh37]
Chr1:1q25.3-44		 pathogenic
GRCh37/hg19 1q41-43(chr1:219916966-239004378)x3 copy number gain not provided [RCV001005175] Chr1:219916966..239004378 [GRCh37]
Chr1:1q41-43		 pathogenic
NM_181463.3(MRPL55):c.228G>A (p.Ala76=) single nucleotide variant not provided [RCV000955875] Chr1:228107668 [GRCh38]
Chr1:228295369 [GRCh37]
Chr1:1q42.13		 benign
GRCh37/hg19 1q32.1-44(chr1:204045948-249218992)x3 copy number gain See cases [RCV001007407] Chr1:204045948..249218992 [GRCh37]
Chr1:1q32.1-44		 pathogenic
GRCh37/hg19 1q32.2-44(chr1:210152794-249218992)x3 copy number gain See cases [RCV001194578] Chr1:210152794..249218992 [GRCh37]
Chr1:1q32.2-44		 pathogenic
NC_000001.10:g.(?_130980840)_(248900000_?)dup duplication Gastrointestinal stromal tumor [RCV001300221]|Parathyroid carcinoma [RCV001341077] Chr1:130980840..248900000 [GRCh37]
Chr1:1q12-44		 uncertain significance
GRCh37/hg19 1q42.13(chr1:227782268-229506509)x1 copy number loss not provided [RCV001795846] Chr1:227782268..229506509 [GRCh37]
Chr1:1q42.13		 uncertain significance
GRCh37/hg19 1q42.12-42.2(chr1:226131690-231908227) copy number loss not specified [RCV002052878] Chr1:226131690..231908227 [GRCh37]
Chr1:1q42.12-42.2		 likely pathogenic
GRCh37/hg19 1q42.13-42.2(chr1:228214912-231483538) copy number loss not specified [RCV002052889] Chr1:228214912..231483538 [GRCh37]
Chr1:1q42.13-42.2		 pathogenic
NC_000001.10:g.(?_228194830)_(228566496_?)dup duplication Multiple mitochondrial dysfunctions syndrome 3 [RCV001943243]|not provided [RCV001919147] Chr1:228194830..228566496 [GRCh37]
Chr1:1q42.13		 uncertain significance|no classifications from unflagged records
GRCh37/hg19 1q31.3-44(chr1:197867914-249224684)x3 copy number gain See cases [RCV002287837] Chr1:197867914..249224684 [GRCh37]
Chr1:1q31.3-44		 pathogenic
GRCh38/hg38 1q32.2-42.13(chr1:228006998-228061271)x2 copy number loss Orofacial cleft 2 [RCV002481175] Chr1:228006998..228061271 [GRCh38]
Chr1:1q32.2-42.13		 association
GRCh37/hg19 1q41-44(chr1:223972939-249224684)x3 copy number gain not provided [RCV002475745] Chr1:223972939..249224684 [GRCh37]
Chr1:1q41-44		 pathogenic
GRCh37/hg19 1q42.13-43(chr1:227992928-236659905)x3 copy number gain not provided [RCV002475638] Chr1:227992928..236659905 [GRCh37]
Chr1:1q42.13-43		 likely pathogenic
NM_181463.3(MRPL55):c.151C>T (p.Leu51Phe) single nucleotide variant not specified [RCV004119562] Chr1:228107745 [GRCh38]
Chr1:228295446 [GRCh37]
Chr1:1q42.13		 uncertain significance
GRCh37/hg19 1q42.11-43(chr1:224230307-243181599)x3 copy number gain not provided [RCV002509019] Chr1:224230307..243181599 [GRCh37]
Chr1:1q42.11-43		 not provided
NM_181463.3(MRPL55):c.130C>T (p.His44Tyr) single nucleotide variant not specified [RCV004231402] Chr1:228107766 [GRCh38]
Chr1:228295467 [GRCh37]
Chr1:1q42.13		 uncertain significance
NM_181463.3(MRPL55):c.319G>A (p.Glu107Lys) single nucleotide variant not specified [RCV004078041] Chr1:228106828 [GRCh38]
Chr1:228294529 [GRCh37]
Chr1:1q42.13		 uncertain significance
GRCh37/hg19 1q42.13(chr1:228215364-229747702)x1 copy number loss not specified [RCV003986606] Chr1:228215364..229747702 [GRCh37]
Chr1:1q42.13		 pathogenic
NM_181463.3(MRPL55):c.241C>A (p.Leu81Met) single nucleotide variant not specified [RCV004500335] Chr1:228106906 [GRCh38]
Chr1:228294607 [GRCh37]
Chr1:1q42.13		 uncertain significance
NM_181463.3(MRPL55):c.28C>T (p.Arg10Trp) single nucleotide variant not specified [RCV004500319] Chr1:228107868 [GRCh38]
Chr1:228295569 [GRCh37]
Chr1:1q42.13		 uncertain significance
NC_000001.10:g.(?_228194830)_(228566496_?)del deletion Multiple mitochondrial dysfunctions syndrome 3 [RCV004583928]|Spastic paraplegia [RCV004583927] Chr1:228194830..228566496 [GRCh37]
Chr1:1q42.13		 pathogenic
NM_181463.3(MRPL55):c.287G>A (p.Arg96His) single nucleotide variant not specified [RCV004638213] Chr1:228106860 [GRCh38]
Chr1:228294561 [GRCh37]
Chr1:1q42.13		 uncertain significance
NM_181463.3(MRPL55):c.27-123C>G single nucleotide variant not specified [RCV004631664] Chr1:228107992 [GRCh38]
Chr1:228295693 [GRCh37]
Chr1:1q42.13		 uncertain significance
NM_181463.3(MRPL55):c.26+176G>A single nucleotide variant not specified [RCV004638214] Chr1:228108059 [GRCh38]
Chr1:228295760 [GRCh37]
Chr1:1q42.13		 uncertain significance
NM_181463.3(MRPL55):c.64G>A (p.Ala22Thr) single nucleotide variant not specified [RCV004638211] Chr1:228107832 [GRCh38]
Chr1:228295533 [GRCh37]
Chr1:1q42.13		 uncertain significance
NM_181463.3(MRPL55):c.320A>G (p.Glu107Gly) single nucleotide variant not specified [RCV004638212] Chr1:228106827 [GRCh38]
Chr1:228294528 [GRCh37]
Chr1:1q42.13		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:11495
Count of miRNA genes:906
Interacting mature miRNAs:1115
Transcripts:ENST00000295008, ENST00000336300, ENST00000336520, ENST00000348259, ENST00000366731, ENST00000366732, ENST00000366733, ENST00000366734, ENST00000366735, ENST00000366736, ENST00000366738, ENST00000366739, ENST00000366740, ENST00000366741, ENST00000366742, ENST00000366744, ENST00000366746, ENST00000366747, ENST00000391867, ENST00000411464, ENST00000430433, ENST00000457264, ENST00000459783, ENST00000463898, ENST00000464148, ENST00000465268, ENST00000465397, ENST00000473066, ENST00000475832, ENST00000476267, ENST00000483159, ENST00000489430, ENST00000492170, ENST00000495434, ENST00000495899, ENST00000497758
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001321284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_181441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_181454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_181455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_181456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_181462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_181463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_181464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_181465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005273059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005273061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005273062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005273063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011544095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002959480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002959481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002959482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA479904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI301403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK056987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL136379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX405668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY358771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF945771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG475759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI458525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM706934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM975134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP871687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ011059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ012917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ684146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ771735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ920610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU594505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU597178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU601595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU956146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX647745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB529047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV572808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000295008   ⟹   ENSP00000295008
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,299 (-)Ensembl
Ensembl Acc Id: ENST00000336300   ⟹   ENSP00000337361
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,306 (-)Ensembl
Ensembl Acc Id: ENST00000336520   ⟹   ENSP00000337342
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,685 - 228,109,299 (-)Ensembl
Ensembl Acc Id: ENST00000348259   ⟹   ENSP00000338189
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,283 (-)Ensembl
Ensembl Acc Id: ENST00000366731   ⟹   ENSP00000355692
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,299 (-)Ensembl
Ensembl Acc Id: ENST00000366732   ⟹   ENSP00000355693
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,108,642 (-)Ensembl
Ensembl Acc Id: ENST00000366733   ⟹   ENSP00000355694
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,108,744 (-)Ensembl
Ensembl Acc Id: ENST00000366734   ⟹   ENSP00000355695
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,108,897 (-)Ensembl
Ensembl Acc Id: ENST00000366735   ⟹   ENSP00000355696
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,004 (-)Ensembl
Ensembl Acc Id: ENST00000366736   ⟹   ENSP00000355697
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,016 (-)Ensembl
Ensembl Acc Id: ENST00000366738   ⟹   ENSP00000355699
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,025 (-)Ensembl
Ensembl Acc Id: ENST00000366739   ⟹   ENSP00000355700
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,031 (-)Ensembl
Ensembl Acc Id: ENST00000366740   ⟹   ENSP00000355701
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,031 (-)Ensembl
Ensembl Acc Id: ENST00000366741   ⟹   ENSP00000355702
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,031 (-)Ensembl
Ensembl Acc Id: ENST00000366742   ⟹   ENSP00000355703
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,055 (-)Ensembl
Ensembl Acc Id: ENST00000366744   ⟹   ENSP00000355705
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,280 (-)Ensembl
Ensembl Acc Id: ENST00000366746   ⟹   ENSP00000355707
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,299 (-)Ensembl
Ensembl Acc Id: ENST00000366747   ⟹   ENSP00000355708
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,109,299 (-)Ensembl
Ensembl Acc Id: ENST00000391867   ⟹   ENSP00000375740
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,687 - 228,109,299 (-)Ensembl
Ensembl Acc Id: ENST00000411464   ⟹   ENSP00000401737
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,107,767 - 228,109,016 (-)Ensembl
Ensembl Acc Id: ENST00000430433   ⟹   ENSP00000403614
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,680 - 228,109,312 (-)Ensembl
Ensembl Acc Id: ENST00000457264   ⟹   ENSP00000409966
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,107,667 - 228,109,300 (-)Ensembl
Ensembl Acc Id: ENST00000459783   ⟹   ENSP00000482290
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,108,325 (-)Ensembl
Ensembl Acc Id: ENST00000464148   ⟹   ENSP00000484813
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,107,824 - 228,109,302 (-)Ensembl
Ensembl Acc Id: ENST00000465268
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,106,679 - 228,108,275 (-)Ensembl
Ensembl Acc Id: ENST00000473066
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,108,114 - 228,109,290 (-)Ensembl
Ensembl Acc Id: ENST00000475832
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,108,059 - 228,109,031 (-)Ensembl
Ensembl Acc Id: ENST00000476267
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,108,232 - 228,109,036 (-)Ensembl
Ensembl Acc Id: ENST00000483159   ⟹   ENSP00000479251
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,108,247 - 228,109,278 (-)Ensembl
Ensembl Acc Id: ENST00000489430
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,108,290 - 228,109,254 (-)Ensembl
Ensembl Acc Id: ENST00000492170
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,108,226 - 228,109,296 (-)Ensembl
Ensembl Acc Id: ENST00000495434   ⟹   ENSP00000479463
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,108,235 - 228,109,295 (-)Ensembl
Ensembl Acc Id: ENST00000495899
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,108,262 - 228,109,290 (-)Ensembl
Ensembl Acc Id: ENST00000497758
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1228,107,785 - 228,108,573 (-)Ensembl
RefSeq Acc Id: NM_001321284   ⟹   NP_001308213
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
CHM1_11229,566,725 - 229,569,358 (-)NCBI
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
Sequence:
RefSeq Acc Id: NM_181441   ⟹   NP_852106
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
GRCh371228,294,380 - 228,297,037 (-)NCBI
Build 361226,361,003 - 226,363,627 (-)NCBI Archive
Celera1201,484,612 - 201,487,245 (-)RGD
HuRef1198,809,501 - 198,812,134 (-)RGD
CHM1_11229,566,725 - 229,569,358 (-)NCBI
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
Sequence:
RefSeq Acc Id: NM_181454   ⟹   NP_852119
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
GRCh371228,294,380 - 228,297,037 (-)NCBI
Build 361226,361,003 - 226,363,627 (-)NCBI Archive
Celera1201,484,612 - 201,487,245 (-)RGD
HuRef1198,809,501 - 198,812,134 (-)RGD
CHM1_11229,566,725 - 229,569,358 (-)NCBI
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
Sequence:
RefSeq Acc Id: NM_181455   ⟹   NP_852120
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
GRCh371228,294,380 - 228,297,037 (-)NCBI
Build 361226,361,003 - 226,363,627 (-)NCBI Archive
Celera1201,484,612 - 201,487,245 (-)RGD
HuRef1198,809,501 - 198,812,134 (-)RGD
CHM1_11229,566,725 - 229,569,358 (-)NCBI
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
Sequence:
RefSeq Acc Id: NM_181456   ⟹   NP_852121
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
GRCh371228,294,380 - 228,297,037 (-)NCBI
Build 361226,361,003 - 226,363,627 (-)NCBI Archive
Celera1201,484,612 - 201,487,245 (-)RGD
HuRef1198,809,501 - 198,812,134 (-)RGD
CHM1_11229,566,725 - 229,569,358 (-)NCBI
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
Sequence:
RefSeq Acc Id: NM_181462   ⟹   NP_852127
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
GRCh371228,294,380 - 228,297,037 (-)NCBI
Build 361226,361,003 - 226,363,627 (-)NCBI Archive
Celera1201,484,612 - 201,487,245 (-)RGD
HuRef1198,809,501 - 198,812,134 (-)RGD
CHM1_11229,566,725 - 229,569,358 (-)NCBI
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
Sequence:
RefSeq Acc Id: NM_181463   ⟹   NP_852128
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
GRCh371228,294,380 - 228,297,037 (-)NCBI
Build 361226,361,003 - 226,363,627 (-)NCBI Archive
Celera1201,484,612 - 201,487,245 (-)RGD
HuRef1198,809,501 - 198,812,134 (-)RGD
CHM1_11229,566,725 - 229,569,358 (-)NCBI
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
Sequence:
RefSeq Acc Id: NM_181464   ⟹   NP_852129
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
GRCh371228,294,380 - 228,297,037 (-)NCBI
Build 361226,361,003 - 226,363,627 (-)NCBI Archive
Celera1201,484,612 - 201,487,245 (-)RGD
HuRef1198,809,501 - 198,812,134 (-)RGD
CHM1_11229,566,725 - 229,569,358 (-)NCBI
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
Sequence:
RefSeq Acc Id: NM_181465   ⟹   NP_852130
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
GRCh371228,294,380 - 228,297,037 (-)NCBI
Build 361226,361,003 - 226,363,627 (-)NCBI Archive
Celera1201,484,612 - 201,487,245 (-)RGD
HuRef1198,809,501 - 198,812,134 (-)RGD
CHM1_11229,566,725 - 229,569,358 (-)NCBI
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005273059   ⟹   XP_005273116
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
GRCh371228,294,380 - 228,297,037 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005273061   ⟹   XP_005273118
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
GRCh371228,294,380 - 228,297,037 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005273062   ⟹   XP_005273119
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
GRCh371228,294,380 - 228,297,037 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005273063   ⟹   XP_005273120
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
GRCh371228,294,380 - 228,297,037 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011544095   ⟹   XP_011542397
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047446079   ⟹   XP_047302035
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
RefSeq Acc Id: XM_047446095   ⟹   XP_047302051
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
RefSeq Acc Id: XM_047446096   ⟹   XP_047302052
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
RefSeq Acc Id: XM_047446098   ⟹   XP_047302054
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
RefSeq Acc Id: XM_047446106   ⟹   XP_047302062
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
RefSeq Acc Id: XM_047446113   ⟹   XP_047302069
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
RefSeq Acc Id: XM_047446123   ⟹   XP_047302079
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
RefSeq Acc Id: XM_047446133   ⟹   XP_047302089
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
RefSeq Acc Id: XM_047446137   ⟹   XP_047302093
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
RefSeq Acc Id: XM_047446139   ⟹   XP_047302095
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
RefSeq Acc Id: XM_047446143   ⟹   XP_047302099
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,106,685 - 228,109,299 (-)NCBI
RefSeq Acc Id: XM_054334431   ⟹   XP_054190406
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334432   ⟹   XP_054190407
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334433   ⟹   XP_054190408
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334434   ⟹   XP_054190409
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334435   ⟹   XP_054190410
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334436   ⟹   XP_054190411
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334437   ⟹   XP_054190412
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334438   ⟹   XP_054190413
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334439   ⟹   XP_054190414
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334440   ⟹   XP_054190415
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334441   ⟹   XP_054190416
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334442   ⟹   XP_054190417
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334443   ⟹   XP_054190418
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,315,175 (-)NCBI
RefSeq Acc Id: XM_054334444   ⟹   XP_054190419
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334445   ⟹   XP_054190420
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334446   ⟹   XP_054190421
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334447   ⟹   XP_054190422
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
RefSeq Acc Id: XM_054334448   ⟹   XP_054190423
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01227,295,671 - 227,298,285 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001308213 (Get FASTA)   NCBI Sequence Viewer  
  NP_852106 (Get FASTA)   NCBI Sequence Viewer  
  NP_852119 (Get FASTA)   NCBI Sequence Viewer  
  NP_852120 (Get FASTA)   NCBI Sequence Viewer  
  NP_852121 (Get FASTA)   NCBI Sequence Viewer  
  NP_852127 (Get FASTA)   NCBI Sequence Viewer  
  NP_852128 (Get FASTA)   NCBI Sequence Viewer  
  NP_852129 (Get FASTA)   NCBI Sequence Viewer  
  NP_852130 (Get FASTA)   NCBI Sequence Viewer  
  XP_005273116 (Get FASTA)   NCBI Sequence Viewer  
  XP_005273118 (Get FASTA)   NCBI Sequence Viewer  
  XP_005273119 (Get FASTA)   NCBI Sequence Viewer  
  XP_005273120 (Get FASTA)   NCBI Sequence Viewer  
  XP_011542397 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302035 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302051 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302052 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302054 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302062 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302069 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302079 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302089 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302093 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302095 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302099 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190406 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190407 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190408 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190409 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190410 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190411 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190412 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190413 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190414 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190415 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190416 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190417 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190418 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190419 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190420 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190421 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190422 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190423 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH52806 (Get FASTA)   NCBI Sequence Viewer  
  AAQ89131 (Get FASTA)   NCBI Sequence Viewer  
  CAD34775 (Get FASTA)   NCBI Sequence Viewer  
  EAW69840 (Get FASTA)   NCBI Sequence Viewer  
  EAW69841 (Get FASTA)   NCBI Sequence Viewer  
  EAW69842 (Get FASTA)   NCBI Sequence Viewer  
  EAW69843 (Get FASTA)   NCBI Sequence Viewer  
  EAW69844 (Get FASTA)   NCBI Sequence Viewer  
  EAW69845 (Get FASTA)   NCBI Sequence Viewer  
  EAW69846 (Get FASTA)   NCBI Sequence Viewer  
  EAW69847 (Get FASTA)   NCBI Sequence Viewer  
  EAW69848 (Get FASTA)   NCBI Sequence Viewer  
  EAW69849 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000295008
  ENSP00000295008.4
  ENSP00000337342
  ENSP00000337342.3
  ENSP00000337361
  ENSP00000337361.5
  ENSP00000338189
  ENSP00000338189.5
  ENSP00000355692.6
  ENSP00000355693.2
  ENSP00000355694
  ENSP00000355694.1
  ENSP00000355695
  ENSP00000355695.1
  ENSP00000355696.1
  ENSP00000355697.1
  ENSP00000355699.1
  ENSP00000355700
  ENSP00000355700.1
  ENSP00000355701.1
  ENSP00000355702.1
  ENSP00000355703
  ENSP00000355703.1
  ENSP00000355705
  ENSP00000355705.1
  ENSP00000355707
  ENSP00000355707.3
  ENSP00000355708
  ENSP00000355708.3
  ENSP00000375740
  ENSP00000375740.3
  ENSP00000401737.3
  ENSP00000403614
  ENSP00000403614.1
  ENSP00000409966.1
  ENSP00000479463.1
  ENSP00000482290.1
  ENSP00000484813.1
GenBank Protein Q7Z7F7 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_852106   ⟸   NM_181441
- Peptide Label: isoform a
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_852121   ⟸   NM_181456
- Peptide Label: isoform a
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_852128   ⟸   NM_181463
- Peptide Label: isoform a
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_852127   ⟸   NM_181462
- Peptide Label: isoform b
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_852130   ⟸   NM_181465
- Peptide Label: isoform a
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_852129   ⟸   NM_181464
- Peptide Label: isoform a
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_852120   ⟸   NM_181455
- Peptide Label: isoform a
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_852119   ⟸   NM_181454
- Peptide Label: isoform a
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005273116   ⟸   XM_005273059
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005273119   ⟸   XM_005273062
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005273120   ⟸   XM_005273063
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005273118   ⟸   XM_005273061
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011542397   ⟸   XM_011544095
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001308213   ⟸   NM_001321284
- Peptide Label: isoform a
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSP00000484813   ⟸   ENST00000464148
Ensembl Acc Id: ENSP00000401737   ⟸   ENST00000411464
Ensembl Acc Id: ENSP00000338189   ⟸   ENST00000348259
Ensembl Acc Id: ENSP00000295008   ⟸   ENST00000295008
Ensembl Acc Id: ENSP00000337361   ⟸   ENST00000336300
Ensembl Acc Id: ENSP00000337342   ⟸   ENST00000336520
Ensembl Acc Id: ENSP00000479463   ⟸   ENST00000495434
Ensembl Acc Id: ENSP00000409966   ⟸   ENST00000457264
Ensembl Acc Id: ENSP00000479251   ⟸   ENST00000483159
Ensembl Acc Id: ENSP00000355701   ⟸   ENST00000366740
Ensembl Acc Id: ENSP00000355702   ⟸   ENST00000366741
Ensembl Acc Id: ENSP00000355707   ⟸   ENST00000366746
Ensembl Acc Id: ENSP00000355708   ⟸   ENST00000366747
Ensembl Acc Id: ENSP00000355703   ⟸   ENST00000366742
Ensembl Acc Id: ENSP00000355705   ⟸   ENST00000366744
Ensembl Acc Id: ENSP00000355700   ⟸   ENST00000366739
Ensembl Acc Id: ENSP00000355696   ⟸   ENST00000366735
Ensembl Acc Id: ENSP00000355697   ⟸   ENST00000366736
Ensembl Acc Id: ENSP00000355699   ⟸   ENST00000366738
Ensembl Acc Id: ENSP00000355692   ⟸   ENST00000366731
Ensembl Acc Id: ENSP00000355693   ⟸   ENST00000366732
Ensembl Acc Id: ENSP00000355694   ⟸   ENST00000366733
Ensembl Acc Id: ENSP00000355695   ⟸   ENST00000366734
Ensembl Acc Id: ENSP00000403614   ⟸   ENST00000430433
Ensembl Acc Id: ENSP00000375740   ⟸   ENST00000391867
Ensembl Acc Id: ENSP00000482290   ⟸   ENST00000459783
RefSeq Acc Id: XP_047302093   ⟸   XM_047446137
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302099   ⟸   XM_047446143
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302089   ⟸   XM_047446133
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302095   ⟸   XM_047446139
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302052   ⟸   XM_047446096
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302069   ⟸   XM_047446113
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302079   ⟸   XM_047446123
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302062   ⟸   XM_047446106
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302051   ⟸   XM_047446095
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302054   ⟸   XM_047446098
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302035   ⟸   XM_047446079
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190418   ⟸   XM_054334443
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190421   ⟸   XM_054334446
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190423   ⟸   XM_054334448
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190420   ⟸   XM_054334445
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190415   ⟸   XM_054334440
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190422   ⟸   XM_054334447
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190413   ⟸   XM_054334438
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190417   ⟸   XM_054334442
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190419   ⟸   XM_054334444
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190416   ⟸   XM_054334441
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190409   ⟸   XM_054334434
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190412   ⟸   XM_054334437
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190414   ⟸   XM_054334439
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190408   ⟸   XM_054334433
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190411   ⟸   XM_054334436
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190407   ⟸   XM_054334432
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190410   ⟸   XM_054334435
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190406   ⟸   XM_054334431
- Peptide Label: isoform X1
- UniProtKB: Q7Z7F7 (UniProtKB/Swiss-Prot),   Q6UWI8 (UniProtKB/Swiss-Prot),   Q5TBY6 (UniProtKB/Swiss-Prot),   Q5TBY3 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7Z7F7-F1-model_v2 AlphaFold Q7Z7F7 1-128 view protein structure

Promoters
RGD ID:6815766
Promoter ID:HG_SPT:5850
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:AA482453,   AA532627,   AI042254,   AI074994,   AI206775,   AI261835,   AI369601,   AI370680,   AI800014,   AI813413,   AW327781,   AW439353,   BF840139,   BF966831,   BF967627,   BG775400,   BI489456,   BM041305,   BM701102,   BM715880,   BM973768,   BM974751,   BM975134,   BM977969,   BQ001279,   BQ011059,   BQ011973,   BQ012038,   BQ012917,   BQ013158,   BQ015629,   BQ015684,   BQ574999,   BQ771735,   BU620495,   BU681921,   BU728253,   BU728321,   BU730983,   BU733622,   BU753445,   BU754015,   BX448449,   CA311917,   CA444802,   CA447633,   CB305737,   CB529047,   CF528457,   CF528684,   CF529051,   CF529340,   CF529734,   CF529884,   CN272246,   DB330928,   N54740,   W58698
Position:
Human AssemblyChrPosition (strand)Source
Build 361226,359,866 - 226,360,366 (+)MPROMDB
RGD ID:6786069
Promoter ID:HG_KWN:7684
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000366731,   ENST00000366732,   ENST00000366733,   ENST00000366734,   ENST00000366735,   ENST00000366736,   ENST00000366738,   ENST00000366739,   ENST00000366740,   ENST00000366741,   ENST00000366742,   ENST00000366744,   NM_181441,   NM_181454,   NM_181455,   NM_181456,   NM_181462,   NM_181463,   NM_181464,   NM_181465,   OTTHUMT00000092807,   OTTHUMT00000092809,   OTTHUMT00000092810,   OTTHUMT00000092813,   OTTHUMT00000092814,   OTTHUMT00000092815,   OTTHUMT00000092816,   OTTHUMT00000092818,   OTTHUMT00000092820,   OTTHUMT00000092823,   OTTHUMT00000092826,   OTTHUMT00000092828,   OTTHUMT00000092830,   OTTHUMT00000092831,   OTTHUMT00000092836,   UC009XEX.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361226,362,736 - 226,363,712 (-)MPROMDB
RGD ID:6859182
Promoter ID:EPDNEW_H2756
Type:initiation region
Name:MRPL55_1
Description:mitochondrial ribosomal protein L55
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381228,109,299 - 228,109,359EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:16686 AgrOrtholog
COSMIC MRPL55 COSMIC
Ensembl Genes ENSG00000162910 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000295008 ENTREZGENE
  ENST00000295008.8 UniProtKB/Swiss-Prot
  ENST00000336300 ENTREZGENE
  ENST00000336300.9 UniProtKB/Swiss-Prot
  ENST00000336520 ENTREZGENE
  ENST00000336520.8 UniProtKB/Swiss-Prot
  ENST00000348259 ENTREZGENE
  ENST00000348259.9 UniProtKB/Swiss-Prot
  ENST00000366731.9 UniProtKB/TrEMBL
  ENST00000366732.5 UniProtKB/TrEMBL
  ENST00000366733 ENTREZGENE
  ENST00000366733.5 UniProtKB/Swiss-Prot
  ENST00000366734 ENTREZGENE
  ENST00000366734.5 UniProtKB/Swiss-Prot
  ENST00000366735.5 UniProtKB/Swiss-Prot
  ENST00000366736.5 UniProtKB/Swiss-Prot
  ENST00000366738.5 UniProtKB/Swiss-Prot
  ENST00000366739 ENTREZGENE
  ENST00000366739.5 UniProtKB/Swiss-Prot
  ENST00000366740.5 UniProtKB/Swiss-Prot
  ENST00000366741.5 UniProtKB/Swiss-Prot
  ENST00000366742 ENTREZGENE
  ENST00000366742.5 UniProtKB/Swiss-Prot
  ENST00000366744 ENTREZGENE
  ENST00000366744.5 UniProtKB/Swiss-Prot
  ENST00000366746 ENTREZGENE
  ENST00000366746.7 UniProtKB/Swiss-Prot
  ENST00000366747 ENTREZGENE
  ENST00000366747.7 UniProtKB/Swiss-Prot
  ENST00000391867 ENTREZGENE
  ENST00000391867.8 UniProtKB/Swiss-Prot
  ENST00000411464.3 UniProtKB/TrEMBL
  ENST00000430433 ENTREZGENE
  ENST00000430433.5 UniProtKB/Swiss-Prot
  ENST00000457264.5 UniProtKB/TrEMBL
  ENST00000459783.5 UniProtKB/TrEMBL
  ENST00000464148.2 UniProtKB/TrEMBL
  ENST00000495434.1 UniProtKB/TrEMBL
Gene3D-CATH 6.20.130.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000162910 GTEx
HGNC ID HGNC:16686 ENTREZGENE
Human Proteome Map MRPL55 Human Proteome Map
InterPro Ribosomal_L55_mit UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ribosomal_L55_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:128308 UniProtKB/Swiss-Prot
NCBI Gene MRPL55 ENTREZGENE
OMIM 611859 OMIM
PANTHER 39S RIBOSOMAL PROTEIN L55, MITOCHONDRIAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR34095 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Mitoc_L55 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA30988 PharmGKB
UniProt A0A087X2A2_HUMAN UniProtKB/TrEMBL
  A0A0A0MST4_HUMAN UniProtKB/TrEMBL
  A0A0G2JMK5_HUMAN UniProtKB/TrEMBL
  Q5TBY3 ENTREZGENE
  Q5TBY6 ENTREZGENE
  Q6UWI8 ENTREZGENE
  Q7Z7F7 ENTREZGENE, UniProtKB/Swiss-Prot
  X6R631_HUMAN UniProtKB/TrEMBL
  X6RIW1_HUMAN UniProtKB/TrEMBL
UniProt Secondary Q5TBY3 UniProtKB/Swiss-Prot
  Q5TBY6 UniProtKB/Swiss-Prot
  Q6UWI8 UniProtKB/Swiss-Prot