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Gene: RWDD3 (RWD domain containing 3) Homo sapiens

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Symbol:

RWDD3

Name:

RWD domain containing 3

RGD ID:

1314557

HGNC Page

HGNC:21393

Description:

Involved in negative regulation of NF-kappaB transcription factor activity; positive regulation of hypoxia-inducible factor-1alpha signaling pathway; and positive regulation of protein sumoylation. Predicted to be located in cytoplasm and nucleus.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

DKFZp566K023; FLJ51225; RSUME; RWD domain-containing protein 3; RWD domain-containing sumoylation enhancer; RWD-containing sumoylation enhancer

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Mus musculus (house mouse):	Rwdd3 (RWD domain containing 3)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Rattus norvegicus (Norway rat):	Rwdd3 (RWD domain containing 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Chinchilla lanigera (long-tailed chinchilla):	Rwdd3 (RWD domain containing 3)	NCBI	Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):	RWDD3 (RWD domain containing 3)	NCBI	Ortholog
Canis lupus familiaris (dog):	RWDD3 (RWD domain containing 3)	HGNC	HomoloGene, NCBI
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rwdd3 (RWD domain containing 3)	NCBI	Ortholog
Sus scrofa (pig):	RWDD3 (RWD domain containing 3)	HGNC	Ensembl, NCBI, OrthoDB
Chlorocebus sabaeus (green monkey):	RWDD3 (RWD domain containing 3)	NCBI	Ortholog
Heterocephalus glaber (naked mole-rat):	Rwdd3 (RWD domain containing 3)	NCBI	Ortholog
Other homologs ²
Rattus norvegicus (Norway rat):	Rwdd2b (RWD domain containing 2B)	HGNC	Panther
Mus musculus (house mouse):	Rwdd2b (RWD domain containing 2B)	HGNC	Panther
Canis lupus familiaris (dog):	RWDD2B (RWD domain containing 2B)	HGNC	Panther
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Rwdd3 (RWD domain containing 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rwdd3 (RWD domain containing 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rwdd3 (RWD domain containing 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Xenopus tropicalis (tropical clawed frog):	rwdd3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus laevis (African clawed frog):	rwdd3.L	Alliance	DIOPT (Xenbase)
Xenopus laevis (African clawed frog):	rwdd3.S	Alliance	DIOPT (Xenbase)

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	95,234,155 - 95,247,225 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	95,234,210 - 95,247,225 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	95,699,711 - 95,712,781 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	95,472,299 - 95,485,369 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	95,411,787 - 95,424,794	NCBI
Celera	1	93,954,133 - 93,967,204 (+)	NCBI		Celera
Cytogenetic Map	1	p21.3	NCBI
HuRef	1	93,821,651 - 93,834,724 (+)	NCBI		HuRef
CHM1_1	1	95,814,224 - 95,827,606 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	95,082,240 - 95,095,318 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RWDD3	Human	17beta-estradiol	affects expression	EXP		6480464	Estradiol affects the expression of RWDD3 mRNA	CTD	PMID:22574217
RWDD3	Human	17beta-estradiol	decreases expression	ISO	Rwdd3 (Mus musculus)	6480464	Estradiol results in decreased expression of RWDD3 mRNA	CTD	PMID:39298647
RWDD3	Human	17beta-estradiol	decreases expression	EXP		6480464	Estradiol results in decreased expression of RWDD3 mRNA	CTD	PMID:23019147
RWDD3	Human	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Rwdd3 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of RWDD3 mRNA	CTD	PMID:21570461
RWDD3	Human	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	Rwdd3 (Rattus norvegicus)	6480464	Tetrachlorodibenzodioxin results in increased expression of RWDD3 mRNA	CTD	PMID:33387578
RWDD3	Human	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	ISO	Rwdd3 (Mus musculus)	6480464	Tetrachlorodibenzodioxin results in decreased expression of RWDD3 mRNA	CTD	PMID:25975270
RWDD3	Human	2,6-dinitrotoluene	affects expression	ISO	Rwdd3 (Rattus norvegicus)	6480464	2 and 6-dinitrotoluene affects the expression of RWDD3 mRNA	CTD	PMID:21346803
RWDD3	Human	3-isobutyl-1-methyl-7H-xanthine	multiple interactions	EXP		6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of RWDD3 mRNA	CTD	PMID:28628672
RWDD3	Human	4,4'-sulfonyldiphenol	multiple interactions	EXP		6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of RWDD3 mRNA	CTD	PMID:28628672
RWDD3	Human	4,4'-sulfonyldiphenol	decreases expression	ISO	Rwdd3 (Mus musculus)	6480464	bisphenol S results in decreased expression of RWDD3 mRNA	CTD	PMID:39298647
RWDD3	Human	6-propyl-2-thiouracil	decreases expression	ISO	Rwdd3 (Rattus norvegicus)	6480464	Propylthiouracil results in decreased expression of RWDD3 mRNA	CTD	PMID:30047161
RWDD3	Human	amitrole	decreases expression	ISO	Rwdd3 (Rattus norvegicus)	6480464	Amitrole results in decreased expression of RWDD3 mRNA	CTD	PMID:30047161
RWDD3	Human	benzo[a]pyrene	decreases expression	ISO	Rwdd3 (Mus musculus)	6480464	Benzo(a)pyrene results in decreased expression of RWDD3 mRNA	CTD	PMID:19770486
RWDD3	Human	benzo[a]pyrene	affects methylation	EXP		6480464	Benzo(a)pyrene affects the methylation of RWDD3 promoter	CTD	PMID:27901495
RWDD3	Human	bisphenol A	increases expression	ISO	Rwdd3 (Rattus norvegicus)	6480464	bisphenol A results in increased expression of RWDD3 mRNA	CTD	PMID:25181051
RWDD3	Human	bisphenol F	decreases expression	ISO	Rwdd3 (Mus musculus)	6480464	bisphenol F results in decreased expression of RWDD3 mRNA	CTD	PMID:38685157
RWDD3	Human	calcium silicate	increases expression	ISO	Rwdd3 (Mus musculus)	6480464	calcium silicate results in increased expression of RWDD3 mRNA	CTD	PMID:29279043
RWDD3	Human	camptothecin	increases expression	EXP		6480464	Camptothecin results in increased expression of RWDD3 mRNA	CTD	PMID:33770205
RWDD3	Human	carbon nanotube	decreases expression	ISO	Rwdd3 (Mus musculus)	6480464	Nanotubes and Carbon results in decreased expression of RWDD3 mRNA	CTD	PMID:25554681
RWDD3	Human	chlorpyrifos	decreases expression	ISO	Rwdd3 (Mus musculus)	6480464	Chlorpyrifos results in decreased expression of RWDD3 mRNA	CTD	PMID:32715474
RWDD3	Human	clofibrate	decreases expression	ISO	Rwdd3 (Mus musculus)	6480464	Clofibrate results in decreased expression of RWDD3 mRNA	CTD	PMID:23811191
RWDD3	Human	copper(II) sulfate	decreases expression	EXP		6480464	Copper Sulfate results in decreased expression of RWDD3 mRNA	CTD	PMID:19549813
RWDD3	Human	cyclosporin A	decreases expression	EXP		6480464	Cyclosporine results in decreased expression of RWDD3 mRNA	CTD	PMID:20106945 and PMID:25562108
RWDD3	Human	dexamethasone	multiple interactions	EXP		6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of RWDD3 mRNA	CTD	PMID:28628672
RWDD3	Human	dicrotophos	decreases expression	EXP		6480464	dicrotophos results in decreased expression of RWDD3 mRNA	CTD	PMID:28302478
RWDD3	Human	furan	increases methylation	ISO	Rwdd3 (Rattus norvegicus)	6480464	furan results in increased methylation of RWDD3 gene	CTD	PMID:22079235
RWDD3	Human	gentamycin	increases expression	ISO	Rwdd3 (Rattus norvegicus)	6480464	Gentamicins results in increased expression of RWDD3 mRNA	CTD	PMID:33387578
RWDD3	Human	indometacin	multiple interactions	EXP		6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of RWDD3 mRNA	CTD	PMID:28628672
RWDD3	Human	methamphetamine	decreases expression	ISO	Rwdd3 (Rattus norvegicus)	6480464	Methamphetamine results in decreased expression of RWDD3 mRNA	CTD	PMID:19564919
RWDD3	Human	methimazole	decreases expression	ISO	Rwdd3 (Rattus norvegicus)	6480464	Methimazole results in decreased expression of RWDD3 mRNA	CTD	PMID:30047161
RWDD3	Human	methotrexate	increases expression	EXP		6480464	Methotrexate results in increased expression of RWDD3 mRNA	CTD	PMID:33770205
RWDD3	Human	methylparaben	decreases expression	EXP		6480464	methylparaben results in decreased expression of RWDD3 mRNA	CTD	PMID:31745603
RWDD3	Human	niclosamide	decreases expression	EXP		6480464	Niclosamide results in decreased expression of RWDD3 mRNA	CTD	PMID:36318118
RWDD3	Human	okadaic acid	decreases expression	EXP		6480464	Okadaic Acid results in decreased expression of RWDD3 mRNA	CTD	PMID:38832940
RWDD3	Human	phenobarbital	decreases expression	ISO	Rwdd3 (Rattus norvegicus)	6480464	Phenobarbital results in decreased expression of RWDD3 mRNA	CTD	PMID:30047161
RWDD3	Human	silicon dioxide	decreases expression	ISO	Rwdd3 (Mus musculus)	6480464	Silicon Dioxide results in decreased expression of RWDD3 mRNA	CTD	PMID:19073995
RWDD3	Human	sodium fluoride	increases expression	ISO	Rwdd3 (Mus musculus)	6480464	Sodium Fluoride results in increased expression of RWDD3 mRNA	CTD	PMID:27862939
RWDD3	Human	Soman	decreases expression	ISO	Rwdd3 (Rattus norvegicus)	6480464	Soman results in decreased expression of RWDD3 mRNA	CTD	PMID:19281266
RWDD3	Human	sulfadimethoxine	decreases expression	ISO	Rwdd3 (Rattus norvegicus)	6480464	Sulfadimethoxine results in decreased expression of RWDD3 mRNA	CTD	PMID:30047161
RWDD3	Human	sunitinib	decreases expression	EXP		6480464	Sunitinib results in decreased expression of RWDD3 mRNA	CTD	PMID:31533062
RWDD3	Human	tetraphene	increases expression	ISO	Rwdd3 (Mus musculus)	6480464	benz(a)anthracene results in increased expression of RWDD3 mRNA	CTD	PMID:26377693
RWDD3	Human	thioacetamide	decreases expression	ISO	Rwdd3 (Rattus norvegicus)	6480464	Thioacetamide results in decreased expression of RWDD3 mRNA	CTD	PMID:34492290
RWDD3	Human	titanium dioxide	increases expression	ISO	Rwdd3 (Mus musculus)	6480464	titanium dioxide results in increased expression of RWDD3 mRNA	CTD	PMID:23557971
RWDD3	Human	trichloroethene	increases expression	ISO	Rwdd3 (Rattus norvegicus)	6480464	Trichloroethylene results in increased expression of RWDD3 mRNA	CTD	PMID:33387578
RWDD3	Human	trichostatin A	affects expression	EXP		6480464	trichostatin A affects the expression of RWDD3 mRNA	CTD	PMID:28542535
RWDD3	Human	triphenyl phosphate	affects expression	EXP		6480464	triphenyl phosphate affects the expression of RWDD3 mRNA	CTD	PMID:37042841
RWDD3	Human	valproic acid	decreases expression	EXP		6480464	Valproic Acid results in decreased expression of RWDD3 mRNA	CTD	PMID:23179753
RWDD3	Human	vorinostat	decreases expression	EXP		6480464	Vorinostat results in decreased expression of RWDD3 mRNA	CTD	PMID:33770205

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RWDD3	Human	negative regulation of NF-kappaB transcription factor activity	involved_in	IDA		150520179	PMID:23469069	UniProt	PMID:23469069
RWDD3	Human	positive regulation of hypoxia-inducible factor-1alpha signaling pathway	acts_upstream_of_or_within	ISO	Rwdd3 (Mus musculus)	9068941	PMID:22009797	MGI	PMID:22009797
RWDD3	Human	positive regulation of hypoxia-inducible factor-1alpha signaling pathway	involved_in	IDA		150520179	PMID:23469069	UniProt	PMID:23469069
RWDD3	Human	positive regulation of hypoxia-inducible factor-1alpha signaling pathway	involved_in	IEA	InterPro:IPR038840	150520179		InterPro	GO_REF:0000002
RWDD3	Human	positive regulation of protein sumoylation	involved_in	IEA	InterPro:IPR038840	150520179		InterPro	GO_REF:0000002
RWDD3	Human	positive regulation of protein sumoylation	involved_in	IDA		150520179	PMID:23469069	UniProt	PMID:23469069

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RWDD3	Human	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	150520179		UniProt	GO_REF:0000043
RWDD3	Human	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	150520179		UniProt	GO_REF:0000044
RWDD3	Human	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	150520179		UniProt	GO_REF:0000044
RWDD3	Human	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	150520179		UniProt	GO_REF:0000043

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RWDD3	Human	protein binding	enables	IPI	UniProtKB:P63165 and UniProtKB:P63279	150520179	PMID:17956732	IntAct	PMID:17956732
RWDD3	Human	protein binding	enables	IPI	UniProtKB:P25963 more ...	150520179	PMID:23469069	UniProt	PMID:23469069

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:7566098	PMID:11076863	PMID:11230166	PMID:12477932	PMID:15146197	PMID:15489334	PMID:15489336	PMID:16381901	PMID:16710414	PMID:17956732	PMID:19407504	PMID:21873635
PMID:22009797	PMID:22658674	PMID:22877241	PMID:23362303	PMID:23469069	PMID:23508108	PMID:25500545	PMID:25549536	PMID:26297826	PMID:27506944	PMID:27989771	PMID:29622689
PMID:29977365	PMID:30890701	PMID:31476572	PMID:31586073	PMID:35528020

RWDD3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	95,234,155 - 95,247,225 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	95,234,210 - 95,247,225 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	95,699,711 - 95,712,781 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	95,472,299 - 95,485,369 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	95,411,787 - 95,424,794	NCBI
Celera	1	93,954,133 - 93,967,204 (+)	NCBI		Celera
Cytogenetic Map	1	p21.3	NCBI
HuRef	1	93,821,651 - 93,834,724 (+)	NCBI		HuRef
CHM1_1	1	95,814,224 - 95,827,606 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	95,082,240 - 95,095,318 (+)	NCBI		T2T-CHM13v2.0

Rwdd3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	120,949,046 - 120,965,427 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	120,949,047 - 120,965,344 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	121,155,397 - 121,171,781 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	121,155,398 - 121,171,695 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	120,858,318 - 120,874,613 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	121,163,006 - 121,163,717 (-)	NCBI		MGSCv36	mm8
Celera	3	127,503,418 - 127,519,689 (-)	NCBI		Celera
Cytogenetic Map	3	G1	NCBI
cM Map	3	52.94	NCBI

Rwdd3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	211,918,361 - 211,933,644 (-)	NCBI		GRCr8
mRatBN7.2	2	209,233,622 - 209,254,842 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	209,233,622 - 209,248,853 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	216,874,398 - 216,890,050 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	214,800,350 - 214,815,993 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	209,641,329 - 209,657,063 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	224,710,351 - 224,723,136 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	224,710,348 - 224,723,112 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	242,756,616 - 242,769,365 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	217,738,411 - 217,753,572 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	217,703,915 - 217,704,175 (-)	NCBI
Celera	2	201,668,749 - 201,684,356 (-)	NCBI		Celera
Cytogenetic Map	2	q42	NCBI

Rwdd3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955435	398,718 - 412,466 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955435	398,707 - 412,476 (+)	NCBI	ChiLan1.0	ChiLan1.0

RWDD3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	131,774,332 - 131,792,072 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	130,930,176 - 130,944,559 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	97,895,972 - 97,909,114 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	96,622,134 - 96,634,902 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	96,622,140 - 96,634,894 (+)	Ensembl	panpan1.1		panPan2

RWDD3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	54,082,061 - 54,094,218 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	54,079,751 - 54,086,489 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	56,778,401 - 56,791,978 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	54,451,562 - 54,465,141 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	54,453,931 - 54,465,403 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	54,126,117 - 54,139,693 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	54,113,046 - 54,126,612 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	54,565,794 - 54,579,372 (-)	NCBI		UU_Cfam_GSD_1.0

Rwdd3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	104,916,011 - 104,928,636 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936537	4,017,661 - 4,031,981 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936537	4,019,337 - 4,031,951 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RWDD3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	122,187,952 - 122,203,115 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	122,187,949 - 122,203,146 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	133,994,941 - 133,997,650 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RWDD3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	38,004,334 - 38,021,344 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666033	80,048,896 - 80,063,445 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rwdd3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624742	2,407,512 - 2,458,249 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624742	2,407,055 - 2,420,425 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in RWDD3
22 total Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 1p31.1-13.3(chr1:72661709-107456880)x3	copy number gain	Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051825]\|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051825]\|See cases [RCV000051825]	Chr1:72661709..107456880 [GRCh38] Chr1:73127392..107999502 [GRCh37] Chr1:72899980..107801025 [NCBI36] Chr1:1p31.1-13.3	pathogenic
GRCh38/hg38 1p31.1-21.1(chr1:83457325-104273917)x3	copy number gain	See cases [RCV000135654]	Chr1:83457325..104273917 [GRCh38] Chr1:83923008..104816539 [GRCh37] Chr1:83695596..104618062 [NCBI36] Chr1:1p31.1-21.1	pathogenic
GRCh38/hg38 1p21.3(chr1:95230768-95286879)x1	copy number loss	See cases [RCV000141275]	Chr1:95230768..95286879 [GRCh38] Chr1:95696324..95752435 [GRCh37] Chr1:95468912..95525023 [NCBI36] Chr1:1p21.3	uncertain significance
GRCh37/hg19 1p36.12-12(chr1:20608823-120546301)x3	copy number loss	not provided [RCV000762767]	Chr1:20608823..120546301 [GRCh37] Chr1:1p36.12-12	likely benign
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3	copy number gain	See cases [RCV000510383]	Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)	copy number gain	See cases [RCV000510926]	Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44	pathogenic
NM_015485.5(RWDD3):c.26T>G (p.Leu9Arg)	single nucleotide variant	not specified [RCV004291746]	Chr1:95234256 [GRCh38] Chr1:95699812 [GRCh37] Chr1:1p21.3	uncertain significance
GRCh37/hg19 1p22.1-11.2(chr1:93837992-121343783)x3	copy number gain	See cases [RCV000512354]	Chr1:93837992..121343783 [GRCh37] Chr1:1p22.1-11.2	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3	copy number gain	not provided [RCV000736295]	Chr1:47851..249228449 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3	copy number gain	not provided [RCV000736305]	Chr1:82154..249218992 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p21.3(chr1:95656619-95782533)x3	copy number gain	not provided [RCV000736575]	Chr1:95656619..95782533 [GRCh37] Chr1:1p21.3	benign
GRCh37/hg19 1p22.1-13.3(chr1:94054724-111671707)x3	copy number gain	not provided [RCV000749068]	Chr1:94054724..111671707 [GRCh37] Chr1:1p22.1-13.3	pathogenic
GRCh37/hg19 1p36.22-21.1(chr1:103343285-103455144)x3	copy number gain	Global developmental delay [RCV000787285]	Chr1:103343285..103455144 [GRCh37] Chr1:1p36.22-21.1	uncertain significance
GRCh37/hg19 1p21.3(chr1:95638426-95750723)x1	copy number loss	not provided [RCV001005121]	Chr1:95638426..95750723 [GRCh37] Chr1:1p21.3	uncertain significance
GRCh37/hg19 1p22.1-21.3(chr1:93863518-96108930)x1	copy number loss	not provided [RCV001005120]	Chr1:93863518..96108930 [GRCh37] Chr1:1p22.1-21.3	uncertain significance
GRCh37/hg19 1p21.3-13.2(chr1:95046805-114714931)	copy number loss	not specified [RCV002053503]	Chr1:95046805..114714931 [GRCh37] Chr1:1p21.3-13.2	pathogenic
NM_015485.5(RWDD3):c.206C>G (p.Ser69Trp)	single nucleotide variant	not specified [RCV004092589]	Chr1:95244331 [GRCh38] Chr1:95709887 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.576G>C (p.Glu192Asp)	single nucleotide variant	not specified [RCV004110013]	Chr1:95246544 [GRCh38] Chr1:95712100 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.451G>A (p.Ala151Thr)	single nucleotide variant	not specified [RCV004106032]	Chr1:95244576 [GRCh38] Chr1:95710132 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.665C>T (p.Thr222Ile)	single nucleotide variant	not specified [RCV004152006]	Chr1:95246633 [GRCh38] Chr1:95712189 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.403A>G (p.Met135Val)	single nucleotide variant	not specified [RCV004323934]	Chr1:95244528 [GRCh38] Chr1:95710084 [GRCh37] Chr1:1p21.3	likely benign
NM_015485.5(RWDD3):c.391A>G (p.Thr131Ala)	single nucleotide variant	not specified [RCV004365298]	Chr1:95244516 [GRCh38] Chr1:95710072 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.172C>T (p.Pro58Ser)	single nucleotide variant	not specified [RCV004363708]	Chr1:95244297 [GRCh38] Chr1:95709853 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.138T>G (p.Asp46Glu)	single nucleotide variant	not specified [RCV004447104]	Chr1:95244263 [GRCh38] Chr1:95709819 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.92A>G (p.Asp31Gly)	single nucleotide variant	not specified [RCV004447106]	Chr1:95244217 [GRCh38] Chr1:95709773 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.182A>G (p.Tyr61Cys)	single nucleotide variant	not specified [RCV004447105]	Chr1:95244307 [GRCh38] Chr1:95709863 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.697G>A (p.Ala233Thr)	single nucleotide variant	not specified [RCV004661214]	Chr1:95246763 [GRCh38] Chr1:95712319 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.537A>G (p.Ile179Met)	single nucleotide variant	not specified [RCV004661215]	Chr1:95244662 [GRCh38] Chr1:95710218 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.342C>G (p.Ile114Met)	single nucleotide variant	not specified [RCV004863373]	Chr1:95244467 [GRCh38] Chr1:95710023 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.367G>A (p.Gly123Ser)	single nucleotide variant	not specified [RCV004863374]	Chr1:95244492 [GRCh38] Chr1:95710048 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.752C>T (p.Thr251Ile)	single nucleotide variant	not specified [RCV004863375]	Chr1:95246818 [GRCh38] Chr1:95712374 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.17A>G (p.Gln6Arg)	single nucleotide variant	not specified [RCV004863376]	Chr1:95234247 [GRCh38] Chr1:95699803 [GRCh37] Chr1:1p21.3	likely benign
NM_015485.5(RWDD3):c.185C>T (p.Pro62Leu)	single nucleotide variant	not specified [RCV004863372]	Chr1:95244310 [GRCh38] Chr1:95709866 [GRCh37] Chr1:1p21.3	uncertain significance
NM_001199691.1(TLCD4-RWDD3):c.580C>A (p.Arg194Ser)	single nucleotide variant	not specified [RCV004872366]	Chr1:95244224 [GRCh38] Chr1:95709780 [GRCh37] Chr1:1p21.3	uncertain significance
GRCh37/hg19 1p21.3(chr1:95554116-96359492)x3	copy number gain	not provided [RCV000684603]	Chr1:95554116..96359492 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.149C>A (p.Pro50His)	single nucleotide variant	not specified [RCV004234294]	Chr1:95244274 [GRCh38] Chr1:95709830 [GRCh37] Chr1:1p21.3	uncertain significance
NM_015485.5(RWDD3):c.220C>A (p.Gln74Lys)	single nucleotide variant	not specified [RCV004272729]	Chr1:95244345 [GRCh38] Chr1:95709901 [GRCh37] Chr1:1p21.3	uncertain significance
GRCh37/hg19 1p22.1-21.3(chr1:94304238-97280301)x3	copy number gain	not specified [RCV003986895]	Chr1:94304238..97280301 [GRCh37] Chr1:1p22.1-21.3	uncertain significance

Predicted Target Of

	Summary Value
Count of predictions:	924
Count of miRNA genes:	431
Interacting mature miRNAs:	464
Transcripts:	ENST00000263893, ENST00000370202, ENST00000429514, ENST00000460571, ENST00000473397, ENST00000492639, ENST00000495272, ENST00000497058
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
597191738	GWAS1287812_H	level of Phosphatidylcholine (18:0_18:2) in blood serum QTL GWAS1287812 (human)		4e-08	level of Phosphatidylcholine (18:0_18:2) in blood serum		1	95237026	95237027	Human
1559226	SLEP4_H	Serum leptin concentration QTL 4 (human)	3.4		Hormone level	leptin	1	81532913	107532913	Human

AL033903

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	95,710,146 - 95,710,268	UniSTS	GRCh37
Build 36	1	95,482,734 - 95,482,856	RGD	NCBI36
Celera	1	93,964,569 - 93,964,691	RGD
Cytogenetic Map	1	p	UniSTS
Cytogenetic Map	1	p21.3	UniSTS
HuRef	1	93,832,089 - 93,832,211	UniSTS

AL009789

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	95,704,737 - 95,704,860	UniSTS	GRCh37
Build 36	1	95,477,325 - 95,477,448	RGD	NCBI36
Celera	1	93,959,160 - 93,959,283	RGD
Cytogenetic Map	1	p21.3	UniSTS
HuRef	1	93,826,680 - 93,826,803	UniSTS

RWDD3_9436

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	95,712,349 - 95,712,864	UniSTS	GRCh37
Build 36	1	95,484,937 - 95,485,452	RGD	NCBI36
Celera	1	93,966,772 - 93,967,287	RGD
HuRef	1	93,834,292 - 93,834,807	UniSTS

RH68937

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	95,712,527 - 95,712,656	UniSTS	GRCh37
Build 36	1	95,485,115 - 95,485,244	RGD	NCBI36
Celera	1	93,966,950 - 93,967,079	RGD
Cytogenetic Map	1	p21.3	UniSTS
HuRef	1	93,834,470 - 93,834,599	UniSTS
GeneMap99-GB4 RH Map	1	270.04	UniSTS
NCBI RH Map	1	652.0	UniSTS

SHGC-75187

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	95,711,265 - 95,711,394	UniSTS	GRCh37
Build 36	1	95,483,853 - 95,483,982	RGD	NCBI36
Celera	1	93,965,688 - 93,965,817	RGD
Cytogenetic Map	1	p21.3	UniSTS
HuRef	1	93,833,208 - 93,833,337	UniSTS
TNG Radiation Hybrid Map	1	52046.0	UniSTS
GeneMap99-GB4 RH Map	1	270.8	UniSTS
GeneMap99-GB4 RH Map	1	269.33	UniSTS
Whitehead-RH Map	1	282.1	UniSTS
NCBI RH Map	1	652.0	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	pharyngeal arch	renal system	reproductive system	respiratory system	sensory system	visual system
1204	2439	2788	2253	4971	1726	2351	6	624	1951	465	2269	7306	6472	53	3732	1	852	1744	1617	174	1


RefSeq Transcripts	NM_001128142	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001199682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001278247	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001278248	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_015485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_103483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_103484	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AA336253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AA336662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AA825527	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC092802	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK292665	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK292699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK296476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL050062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC010936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC016307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC065813	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC125142	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BU858771	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BX537497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BX648581	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CA454169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471097	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CN306675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CR533493	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DC409838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000263893 ⟹ ENSP00000263893

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	95,234,211 - 95,247,223 (+)	Ensembl

Ensembl Acc Id:

ENST00000370202 ⟹ ENSP00000359221

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	95,234,210 - 95,247,225 (+)	Ensembl

Ensembl Acc Id:

ENST00000460571

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	95,246,058 - 95,247,223 (+)	Ensembl

Ensembl Acc Id:

ENST00000473397

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	95,234,268 - 95,247,220 (+)	Ensembl

Ensembl Acc Id:

ENST00000492639

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	95,234,214 - 95,244,411 (+)	Ensembl

Ensembl Acc Id:

ENST00000495272

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	95,234,221 - 95,247,217 (+)	Ensembl

Ensembl Acc Id:

ENST00000497058

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	95,234,225 - 95,247,223 (+)	Ensembl

RefSeq Acc Id:

NM_001128142 ⟹ NP_001121614

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	95,234,210 - 95,247,225 (+)	NCBI
GRCh37	1	95,699,711 - 95,712,781 (+)	RGD
Celera	1	93,954,133 - 93,967,204 (+)	RGD
HuRef	1	93,821,651 - 93,834,724 (+)	ENTREZGENE
CHM1_1	1	95,814,224 - 95,827,606 (+)	NCBI
T2T-CHM13v2.0	1	95,082,295 - 95,095,318 (+)	NCBI

Sequence:

show sequence

GAGGCGGTGGGGCCCACAGCCATGGCGGAGCCTGTGCAGGAGGAGCTCTCGGTCCTGGCCGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGAGACAGATGGGACCGTGTTCAG
AATTCACACAAAAGCTGAAGGATTTATGGATGTGGATATACCTCTGGAATTGGTGTTCCATTTGCCAGTCAATTATCCTTCATGTCTACCTGGTATCTCGATTAACTCTGAACAGTTGACCAGGGCCC
AGTGTGTGACTGTGAAAGAGAATTTACTTGAGCAAGCAGAGAGCCTTTTGTCGGAGCCTATGGTTCATGAGCTGGTTCTCTGGATTCAGCAGAATCTCAGGCATATCCTCAGCCAACCAGAAACTGGC
AGTGGCAGTGAAAAGTGTACTTTTTCAACAAGCACGACCATGGATGATGGATTGTGGATAACTCTTTTGCATTTAGATCACATGAGAGCAAAGACTAAATATGTCAAAATTGTGGAGAAGTGGGCTTC
AGATTTAAGGCTGACAGGAAGACTGATGTTCATGGGTAAAATAATACTGATTTTACTACAGGGAGACAGAAACAACCTCAAGGTGCCAAAAAGTTAAATGTTTCTGGCATTTGAAGTCAAAGAGTATT
CAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACTTAAGAAGCTTTTCTCCGAATTTGTACTTGCTCTGGTAAAATGAAATGGAAGACAGGAATCTTTTAGTAAAATAGCAGTGTTTTTT
GTTGTTTTTGCATTGGATTTGGGGAGTGGTTAATTGAAATAGTCAATTTTAAAGTTTCTCTGAAGCAAAATGATAGGCATCATTCTAACTTCAGGAACAAAAGCCAGTTCTGTTTTATGAAATATTAA
ACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGTAGATGAGACATTATTTAAAAGATAAATTTAAAAAGATGGTAAATGAACACTTGTTTTTATAGACAATATTTGTTT
GAAACTATGTAATTTTCTGGCTAATTTTCTTGTAATTAAATGATTTTTTAAAAAAGA

hide sequence

RefSeq Acc Id:

NM_001199682 ⟹ NP_001186611

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	95,234,210 - 95,247,225 (+)	NCBI
GRCh37	1	95,699,711 - 95,712,781 (+)	ENTREZGENE
HuRef	1	93,821,651 - 93,834,724 (+)	ENTREZGENE
CHM1_1	1	95,814,224 - 95,827,606 (+)	NCBI
T2T-CHM13v2.0	1	95,082,295 - 95,095,318 (+)	NCBI

Sequence:

show sequence

GAGGCGGTGGGGCCCACAGCCATGGCGGAGCCTGTGCAGGAGGAGCTCTCGGTCCTGGCCGCGA
TTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGAGACAGATGGGACCGTGTTCAGAATTCACACAAAAGCTGAAGGATTTATGGATGTGGATATACCTCTGGAATTGGTGTTCCATTTG
CCAGTCAATTATCCTTCATGTCTACCTGGTATCTCGATTAACTCTGAACAGTTGACCAGGGCCCAGTGTGTGACTGTGAAAGAGAATTTACTTGAGCAAGCAGAGAGCCTTTTGTCGGAGCCTATGGT
TCATGAGCTGGTTCTCTGGATTCAGCAGAATCTCAGGCATATCCTCAGCCAACCAGAAACTGGCAGTGGCAGTGAAAAGTGTACTTTTTCAACAAGCACGACCATGGATGATGGATTGTGGATAACTC
TTTTGCATTTAGATCACATGAGAGCAAAGACTAAATATGTCAAAATTGTGGAGAAGTGGGCTTCAGATTTAAGGCTGACAGGAAGACTGATGTTCATGGGAGTACTTGATTCTTCAGAAAACCTCCAA
AGTAGATGTGGACTCAAGTGGAAAGAAATGCAAAGAGAAAATGATTAGTGTACTGTTTGAAACAAAAGTACAGACAGAACACAAAAGGTTTCTGGCATTTGAAGTCAAAGAGTATTCAGCGTTGGATG
AATTACAAAAGGAATTTGAAACTGCAGGACTTAAGAAGCTTTTCTCCGAATTTGTACTTGCTCTGGTAAAATGAAATGGAAGACAGGAATCTTTTAGTAAAATAGCAGTGTTTTTTGTTGTTTTTGCA
TTGGATTTGGGGAGTGGTTAATTGAAATAGTCAATTTTAAAGTTTCTCTGAAGCAAAATGATAGGCATCATTCTAACTTCAGGAACAAAAGCCAGTTCTGTTTTATGAAATATTAAACATGAAGAAAA
CTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGTAGATGAGACATTATTTAAAAGATAAATTTAAAAAGATGGTAAATGAACACTTGTTTTTATAGACAATATTTGTTTGAAACTATGTAA
TTTTCTGGCTAATTTTCTTGTAATTAAATGATTTTTTAAAAAAGA

hide sequence

RefSeq Acc Id:

NM_001278247 ⟹ NP_001265176

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	95,234,210 - 95,247,225 (+)	NCBI
GRCh37	1	95,699,711 - 95,712,781 (+)	NCBI
HuRef	1	93,821,651 - 93,834,724 (+)	NCBI
CHM1_1	1	95,814,224 - 95,827,606 (+)	NCBI
T2T-CHM13v2.0	1	95,082,295 - 95,095,318 (+)	NCBI

Sequence:

show sequence

GAGGCGGTGGGGCCCACAGCCATGGCGGAGCCTGTGCAGGAGGAGCTCTCGGTCCTGGCCGCGA
TTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGGACCAGAAAATAACACAGAGAAAAATGAAAATTGGTAAGGACTGACATGGCTGGCTCAGTAGCTTTTCAAGACTTTCCCCCTGGAC
TACCAACATGTTTCTTTCCTGTGGTTCCCTGCACCAGAGAGGACCCGAGACAGATGGGACCGTGTTCAGAATTCACACAAAAGCTGAAGGATTTATGGATGTGGATATACCTCTGGAATTGGTGTTCC
ATTTGCCAGTCAATTATCCTTCATGTCTACCTGGTATCTCGATTAACTCTGAACAGTTGACCAGGGCCCAGTGTGTGACTGTGAAAGAGAATTTACTTGAGCAAGCAGAGAGCCTTTTGTCGGAGCCT
ATGGTTCATGAGCTGGTTCTCTGGATTCAGCAGAATCTCAGGCATATCCTCAGCCAACCAGAAACTGGCAGTGGCAGTGAAAAGTGTACTTTTTCAACAAGCACGACCATGGATGATGGATTGTGGAT
AACTCTTTTGCATTTAGATCACATGAGAGCAAAGACTAAATATGTCAAAATTGTGGAGAAGTGGGCTTCAGATTTAAGGCTGACAGGAAGACTGATGTTCATGGGAGTACTTGATTCTTCAGAAAACC
TCCAAAGTAGATGTGGACTCAAGTGGAAAGAAATGCAAAGAGAAAATGATTAGTGTACTGTTTGAAACAAAAGTACAGACAGAACACAAAAGGTTTCTGGCATTTGAAGTCAAAGAGTATTCAGCGTT
GGATGAATTACAAAAGGAATTTGAAACTGCAGGACTTAAGAAGCTTTTCTCCGAATTTGTACTTGCTCTGGTAAAATGAAATGGAAGACAGGAATCTTTTAGTAAAATAGCAGTGTTTTTTGTTGTTT
TTGCATTGGATTTGGGGAGTGGTTAATTGAAATAGTCAATTTTAAAGTTTCTCTGAAGCAAAATGATAGGCATCATTCTAACTTCAGGAACAAAAGCCAGTTCTGTTTTATGAAATATTAAACATGAA
GAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGTAGATGAGACATTATTTAAAAGATAAATTTAAAAAGATGGTAAATGAACACTTGTTTTTATAGACAATATTTGTTTGAAACTA
TGTAATTTTCTGGCTAATTTTCTTGTAATTAAATGATTTTTTAAAAAAGA

hide sequence

RefSeq Acc Id:

NM_001278248 ⟹ NP_001265177

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	95,234,210 - 95,247,225 (+)	NCBI
GRCh37	1	95,699,711 - 95,712,781 (+)	NCBI
HuRef	1	93,821,651 - 93,834,724 (+)	NCBI
CHM1_1	1	95,814,224 - 95,827,606 (+)	NCBI
T2T-CHM13v2.0	1	95,082,295 - 95,095,318 (+)	NCBI

Sequence:

show sequence

GAGGCGGTGGGGCCCACAGCCATGGCGGAGCCTGTGCAGGAGGAGCTCTCGGTCCTGGCCGCGA
TTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGGACCAGAAAATAACACAGAGAAAAATGAAAATTGGTAAGGACTGACATGGCTGGCTCAGTAGCTTTTCAAGACTTTCCCCCTGGAC
TACCAACATGTTTCTTTCCTGTGGTTCCCTGCACCAGAGAGGACCCGAGACAGATGGGACCGTGTTCAGAATTCACACAAAAGCTGAAGGATTTATGGATGTGGATATACCTCTGGAATTGGTGTTCC
ATTTGCCAGTCAATTATCCTTCATGTCTACCTGGTATCTCGATTAACTCTGAACAGTTGACCAGGGCCCAGTGTGTGACTGTGAAAGAGAATTTACTTGAGCAAGCAGAGAGCCTTTTGTCGGAGCCT
ATGGTTCATGAGCTGGTTCTCTGGATTCAGCAGAATCTCAGGCATATCCTCAGCCAACCAGAAACTGGCAGTGGCAGTGAAAAGTGTACTTTTTCAACAAGCACGACCATGGATGATGGATTGTGGAT
AACTCTTTTGCATTTAGATCACATGAGAGCAAAGACTAAATATGTCAAAATTGTGGAGAAGTGGGCTTCAGATTTAAGGCTGACAGGAAGACTGATGTTCATGGGTAAAATAATACTGATTTTACTAC
AGGGAGACAGAAACAACCTCAAGGAGTACTTGATTCTTCAGAAAACCTCCAAAGTAGATGTGGACTCAAGTGGAAAGAAATGCAAAGAGAAAATGATTAGTGTACTGTTTGAAACAAAAGTACAGACA
GAACACAAAAGGTTTCTGGCATTTGAAGTCAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACTTAAGAAGCTTTTCTCCGAATTTGTACTTGCTCTGGTAAAATGAAA
TGGAAGACAGGAATCTTTTAGTAAAATAGCAGTGTTTTTTGTTGTTTTTGCATTGGATTTGGGGAGTGGTTAATTGAAATAGTCAATTTTAAAGTTTCTCTGAAGCAAAATGATAGGCATCATTCTAA
CTTCAGGAACAAAAGCCAGTTCTGTTTTATGAAATATTAAACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGTAGATGAGACATTATTTAAAAGATAAATTTAAAAAG
ATGGTAAATGAACACTTGTTTTTATAGACAATATTTGTTTGAAACTATGTAATTTTCTGGCTAATTTTCTTGTAATTAAATGATTTTTTAAAAAAGA

hide sequence

RefSeq Acc Id:

NM_015485 ⟹ NP_056300

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	95,234,210 - 95,247,225 (+)	NCBI
GRCh37	1	95,699,711 - 95,712,781 (+)	RGD
Build 36	1	95,472,299 - 95,485,369 (+)	NCBI Archive
Celera	1	93,954,133 - 93,967,204 (+)	RGD
HuRef	1	93,821,651 - 93,834,724 (+)	ENTREZGENE
CHM1_1	1	95,814,224 - 95,827,606 (+)	NCBI
T2T-CHM13v2.0	1	95,082,295 - 95,095,318 (+)	NCBI

Sequence:

show sequence

GAGGCGGTGGGGCCCACAGCCATGGCGGAGCCTGTGCAGGAGGAGCTCTCGGTCCTGGCCGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGAGACAGATGGGACCGTGTTCAG
AATTCACACAAAAGCTGAAGGATTTATGGATGTGGATATACCTCTGGAATTGGTGTTCCATTTGCCAGTCAATTATCCTTCATGTCTACCTGGTATCTCGATTAACTCTGAACAGTTGACCAGGGCCC
AGTGTGTGACTGTGAAAGAGAATTTACTTGAGCAAGCAGAGAGCCTTTTGTCGGAGCCTATGGTTCATGAGCTGGTTCTCTGGATTCAGCAGAATCTCAGGCATATCCTCAGCCAACCAGAAACTGGC
AGTGGCAGTGAAAAGTGTACTTTTTCAACAAGCACGACCATGGATGATGGATTGTGGATAACTCTTTTGCATTTAGATCACATGAGAGCAAAGACTAAATATGTCAAAATTGTGGAGAAGTGGGCTTC
AGATTTAAGGCTGACAGGAAGACTGATGTTCATGGGTAAAATAATACTGATTTTACTACAGGGAGACAGAAACAACCTCAAGGAGTACTTGATTCTTCAGAAAACCTCCAAAGTAGATGTGGACTCAA
GTGGAAAGAAATGCAAAGAGAAAATGATTAGTGTACTGTTTGAAACAAAAGTACAGACAGAACACAAAAGGTTTCTGGCATTTGAAGTCAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTT
GAAACTGCAGGACTTAAGAAGCTTTTCTCCGAATTTGTACTTGCTCTGGTAAAATGAAATGGAAGACAGGAATCTTTTAGTAAAATAGCAGTGTTTTTTGTTGTTTTTGCATTGGATTTGGGGAGTGG
TTAATTGAAATAGTCAATTTTAAAGTTTCTCTGAAGCAAAATGATAGGCATCATTCTAACTTCAGGAACAAAAGCCAGTTCTGTTTTATGAAATATTAAACATGAAGAAAACTTGTATATTCTAATGT
TTGCCAGGAAAGGCTAGGTTCAGTAGATGAGACATTATTTAAAAGATAAATTTAAAAAGATGGTAAATGAACACTTGTTTTTATAGACAATATTTGTTTGAAACTATGTAATTTTCTGGCTAATTTTC
TTGTAATTAAATGATTTTTTAAAAAAGA

hide sequence

RefSeq Acc Id:

NR_103483

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	95,234,210 - 95,247,225 (+)	NCBI
GRCh37	1	95,699,711 - 95,712,781 (+)	NCBI
HuRef	1	93,821,651 - 93,834,724 (+)	NCBI
CHM1_1	1	95,814,224 - 95,827,606 (+)	NCBI
T2T-CHM13v2.0	1	95,082,295 - 95,095,318 (+)	NCBI

Sequence:

show sequence

GAGGCGGTGGGGCCCACAGCCATGGCGGAGCCTGTGCAGGAGGAGCTCTCGGTCCTGGCCGCGA
TTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGAGACAGATGGGACCGTGTTCAGAATTCACACAAAAGCTGAAGGATTTATGGATGTGGATATACCTCTGGAATTGGTGTTCCATTTG
CCAGTCAATTATCCTTCATGTCTACCTGGTATCTCGATTAACTCTGAACAGTTGACCAGGGCCCAGTGTGTGACTGTGAAAGAGAATTTACTTGAGCAAGCAGAGAGCCTTTTGTCGGAGCCTATGGT
TCATGAGCTGGTTCTCTGGATTCAGCAGAATCTCAGGCATATCCTCAGCCAACCAGAAACTGGCAGTGGCAGTGAAAAGTGTACTTTTTCAACAAGCACGACCATGGATGATGGATTGTGGATAACTC
TTTTGCATTTAGATCACATGAGAGCAAAGACTAAATATGTCAAAATTGTGGAGAAGTGGGCTTCAGATTTAAGGCTGACAGGAAGACTGATGTTCATGGGTAAAATAATACTGATTTTACTACAGGGA
GACAGAAACAACCTCAAGGTGCCAAAAAGTTAAATGAGTACTTGATTCTTCAGAAAACCTCCAAAGTAGATGTGGACTCAAGTGGAAAGAAATGCAAAGAGAAAATGATTAGTGTACTGTTTGAAACA
AAAGTACAGACAGAACACAAAAGGTTTCTGGCATTTGAAGTCAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACTTAAGAAGCTTTTCTCCGAATTTGTACTTGCTCT
GGTAAAATGAAATGGAAGACAGGAATCTTTTAGTAAAATAGCAGTGTTTTTTGTTGTTTTTGCATTGGATTTGGGGAGTGGTTAATTGAAATAGTCAATTTTAAAGTTTCTCTGAAGCAAAATGATAG
GCATCATTCTAACTTCAGGAACAAAAGCCAGTTCTGTTTTATGAAATATTAAACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGTAGATGAGACATTATTTAAAAGAT
AAATTTAAAAAGATGGTAAATGAACACTTGTTTTTATAGACAATATTTGTTTGAAACTATGTAATTTTCTGGCTAATTTTCTTGTAATTAAATGATTTTTTAAAAAAGA

hide sequence

RefSeq Acc Id:

NR_103484

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	95,234,155 - 95,247,225 (+)	NCBI
GRCh37	1	95,699,711 - 95,712,781 (+)	NCBI
HuRef	1	93,821,651 - 93,834,724 (+)	NCBI
CHM1_1	1	95,814,224 - 95,827,606 (+)	NCBI
T2T-CHM13v2.0	1	95,082,240 - 95,095,318 (+)	NCBI

Sequence:

show sequence

AGTGCTGCTCCTGGCCGGTGGAGGCGGCGGCTGCGGCAGCGGAAGGGGAAGCGCTGAGGCGGTGGGGCCCACAGCCATGGCGGAGCCTGTGCAGGAGGAGCTCTCGGTCCTGGCCGCGATTTTCTGCA
GGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGGACCAGAAAATAACACAGAGAAAAATGAAAATTGATCACATGAGAGCAAAGACTAAATATGTCAAAATTGTGGAGAAGTGGGCTTCAGATTTAAG
GCTGACAGGAAGACTGATGTTCATGGGAGTACTTGATTCTTCAGAAAACCTCCAAAGTAGATGTGGACTCAAGTGGAAAGAAATGCAAAGAGAAAATGATTAGTGTACTGTTTGAAACAAAAGTACAG
ACAGAACACAAAAGGTTTCTGGCATTTGAAGTCAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACTTAAGAAGCTTTTCTCCGAATTTGTACTTGCTCTGGTAAAATG
AAATGGAAGACAGGAATCTTTTAGTAAAATAGCAGTGTTTTTTGTTGTTTTTGCATTGGATTTGGGGAGTGGTTAATTGAAATAGTCAATTTTAAAGTTTCTCTGAAGCAAAATGATAGGCATCATTC
TAACTTCAGGAACAAAAGCCAGTTCTGTTTTATGAAATATTAAACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGTAGATGAGACATTATTTAAAAGATAAATTTAAA
AAGATGGTAAATGAACACTTGTTTTTATAGACAATATTTGTTTGAAACTATGTAATTTTCTGGCTAATTTTCTTGTAATTAAATGATTTTTTAAAAAAGAAAAAAAAAAAAAAAA

hide sequence


Protein RefSeqs	NP_001121614	(Get FASTA)	NCBI Sequence Viewer
	NP_001186611	(Get FASTA)	NCBI Sequence Viewer
	NP_001265176	(Get FASTA)	NCBI Sequence Viewer
	NP_001265177	(Get FASTA)	NCBI Sequence Viewer
	NP_056300	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI25143	(Get FASTA)	NCBI Sequence Viewer
	BAF85354	(Get FASTA)	NCBI Sequence Viewer
	BAF85388	(Get FASTA)	NCBI Sequence Viewer
	BAG59117	(Get FASTA)	NCBI Sequence Viewer
	CAB43254	(Get FASTA)	NCBI Sequence Viewer
	CAG38524	(Get FASTA)	NCBI Sequence Viewer
	EAW73019	(Get FASTA)	NCBI Sequence Viewer
	EAW73020	(Get FASTA)	NCBI Sequence Viewer
	EAW73021	(Get FASTA)	NCBI Sequence Viewer
	EAW73022	(Get FASTA)	NCBI Sequence Viewer
	EAW73023	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000263893
	ENSP00000263893.6
	ENSP00000359221
	ENSP00000359221.4
GenBank Protein	Q9Y3V2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001121614 ⟸ NM_001128142
- Peptide Label:	isoform b
- UniProtKB:	B4DKA5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGFMDADIPLELVFHLPVNYPSCLPGISINSEQLTRAQCVTVKENLLEQAESLLSEPMVHELVLWIQQNLRHILSQPETGSGSEKCT FSTSTTMDDGLWITLLHLDHMRAKTKYVKIVEKWASDLRLTGRLMFMGKIILILLQGDRNNLKVPKS hide sequence

RefSeq Acc Id:	NP_056300 ⟸ NM_015485
- Peptide Label:	isoform a
- UniProtKB:	Q9Y3V2 (UniProtKB/Swiss-Prot), Q6FID3 (UniProtKB/Swiss-Prot), Q08AJ7 (UniProtKB/Swiss-Prot), C9JI45 (UniProtKB/Swiss-Prot), C9J9L7 (UniProtKB/Swiss-Prot), A8K9F0 (UniProtKB/Swiss-Prot), A6NP44 (UniProtKB/Swiss-Prot), Q9BX35 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAEPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGFMDADIPLELVFHLPVNYPSCLPGISINSEQLTRAQCVTVKENLLEQAESLLSEPMVHELVLWIQQNLRHILSQPETGSGSEKCT FSTSTTMDDGLWITLLHLDHMRAKTKYVKIVEKWASDLRLTGRLMFMGKIILILLQGDRNNLKEYLILQKTSKVDVDSSGKKCKEKMISVLFETKVQTEHKRFLAFEVKEYSALDELQKEFETAGLKK LFSEFVLALVK hide sequence

RefSeq Acc Id:

NP_001186611 ⟸ NM_001199682

- Peptide Label:

isoform c

- Sequence:

show sequence

MAEPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGFMDADIPLELVFHLPVNYPSC
LPGISINSEQLTRAQCVTVKENLLEQAESLLSEPMVHELVLWIQQNLRHILSQPETGSGSEKCTFSTSTTMDDGLWITLLHLDHMRAKTKYVKIVEKWASDLRLTGRLMFMGVLDSSENLQSRCGLKW
KEMQREND

hide sequence

RefSeq Acc Id:

NP_001265177 ⟸ NM_001278248

- Peptide Label:

isoform e

- Sequence:

show sequence

MFLSCGSLHQRGPETDGTVFRIHTKAEGFMDADIPLELVFHLPVNYPSCLPGISINSEQLTRAQ
CVTVKENLLEQAESLLSEPMVHELVLWIQQNLRHILSQPETGSGSEKCTFSTSTTMDDGLWITLLHLDHMRAKTKYVKIVEKWASDLRLTGRLMFMGKIILILLQGDRNNLKEYLILQKTSKVDVDSS
GKKCKEKMISVLFETKVQTEHKRFLAFEVKEYSALDELQKEFETAGLKKLFSEFVLALVK

hide sequence

RefSeq Acc Id:	NP_001265176 ⟸ NM_001278247
- Peptide Label:	isoform d
- UniProtKB:	B4DKA5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFLSCGSLHQRGPETDGTVFRIHTKAEGFMDADIPLELVFHLPVNYPSCLPGISINSEQLTRAQ CVTVKENLLEQAESLLSEPMVHELVLWIQQNLRHILSQPETGSGSEKCTFSTSTTMDDGLWITLLHLDHMRAKTKYVKIVEKWASDLRLTGRLMFMGVLDSSENLQSRCGLKWKEMQREND hide sequence

Protein Domains

RWD

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9Y3V2-F1-model_v2	AlphaFold	Q9Y3V2	1-267	view protein structure

RGD ID:

6856304

Promoter ID:

EPDNEW_H1317

Type:

initiation region

Name:

RWDD3_1

Description:

RWD domain containing 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	95,234,225 - 95,234,285	EPDNEW

RGD ID:

6786790

Promoter ID:

HG_KWN:3748

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4

Transcripts:

NM_001128142, NM_015485, OTTHUMT00000029940, OTTHUMT00000029941, OTTHUMT00000030075, OTTHUMT00000030080, OTTHUMT00000030081, UC001DRG.2, UC001DRH.2, UC001DRI.2, UC009WDT.1, UC009WDV.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	1	95,472,114 - 95,472,614 (+)	MPROMDB

Database	Acc Id	Source(s)
COSMIC	RWDD3	COSMIC
Ensembl Genes	ENSG00000122481	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000263893	ENTREZGENE
	ENST00000263893.10	UniProtKB/Swiss-Prot
	ENST00000370202	ENTREZGENE
	ENST00000370202.5	UniProtKB/Swiss-Prot
	ENST00000495272	ENTREZGENE
	ENST00000497058	ENTREZGENE
Gene3D-CATH	3.10.110.10	UniProtKB/Swiss-Prot
GTEx	ENSG00000122481	GTEx
HGNC ID	HGNC:21393	ENTREZGENE
Human Proteome Map	RWDD3	Human Proteome Map
InterPro	RWD-domain	UniProtKB/Swiss-Prot
	RWDD3	UniProtKB/Swiss-Prot
	UBQ-conjugating_enzyme/RWD	UniProtKB/Swiss-Prot
KEGG Report	hsa:25950	UniProtKB/Swiss-Prot
NCBI Gene	25950	ENTREZGENE
OMIM	615875	OMIM
PANTHER	PTHR15628	UniProtKB/Swiss-Prot
	RWD DOMAIN-CONTAINING PROTEIN 3	UniProtKB/Swiss-Prot
Pfam	RWD	UniProtKB/Swiss-Prot
PharmGKB	PA134974302	PharmGKB
PROSITE	RWD	UniProtKB/Swiss-Prot
SMART	RWD	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF54495	UniProtKB/Swiss-Prot
UniProt	A6NP44	ENTREZGENE
	A8K9F0	ENTREZGENE
	B4DKA5	ENTREZGENE, UniProtKB/TrEMBL
	C9J9L7	ENTREZGENE
	C9JI45	ENTREZGENE
	Q08AJ7	ENTREZGENE
	Q6FID3	ENTREZGENE
	Q9BX35	ENTREZGENE
	Q9Y3V2	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	A6NP44	UniProtKB/Swiss-Prot
	A8K9F0	UniProtKB/Swiss-Prot
	C9J9L7	UniProtKB/Swiss-Prot
	C9JI45	UniProtKB/Swiss-Prot
	Q08AJ7	UniProtKB/Swiss-Prot
	Q6FID3	UniProtKB/Swiss-Prot
	Q9BX35	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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