Epha1 (Eph receptor A1) - Rat Genome Database

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Gene: Epha1 (Eph receptor A1) Mus musculus
Analyze
Symbol: Epha1
Name: Eph receptor A1
RGD ID: 1312266
MGI Page MGI
Description: Enables ephrin receptor activity. Involved in positive regulation of stress fiber assembly. Predicted to be part of receptor complex. Predicted to be active in plasma membrane. Is expressed in several structures, including alimentary system; central nervous system; egg cylinder; genitourinary system; and unsegmented mesenchyme. Orthologous to human EPHA1 (EPH receptor A1).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 5730453L17Rik; AL033318; embryonic stem cell kinase; Ep; Eph; ephrin type-A receptor 1; Es; Esk; mEpha1; tyrosine-protein kinase receptor ESK
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39642,335,421 - 42,350,249 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl642,335,421 - 42,350,202 (-)EnsemblGRCm39 Ensembl
GRCm38642,358,487 - 42,373,314 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl642,358,487 - 42,373,268 (-)EnsemblGRCm38mm10GRCm38
MGSCv37642,308,486 - 42,323,267 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36642,288,094 - 42,302,875 (-)NCBIMGSCv36mm8
Celera642,303,129 - 42,317,914 (-)NCBICelera
Cytogenetic Map6B2.1NCBI
cM Map620.65NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2-acetamidofluorene  (EXP)
2-hydroxypropanoic acid  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (ISO)
amphetamine  (ISO)
antimonite  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
atrazine  (ISO)
belinostat  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
benzo[e]pyrene  (ISO)
benzopyran  (ISO)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bortezomib  (ISO)
caffeine  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chrysene  (EXP)
ciguatoxin CTX1B  (EXP)
clofibrate  (EXP)
cocaine  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
daidzein  (ISO)
dioxygen  (EXP)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
dorsomorphin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
fulvestrant  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glycitein  (ISO)
gold atom  (EXP)
gold(0)  (EXP)
indole-3-methanol  (ISO)
methapyrilene  (ISO)
Monobutylphthalate  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (ISO)
pirinixic acid  (EXP)
ponatinib  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
propiconazole  (EXP)
rac-lactic acid  (ISO)
raloxifene  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
testosterone  (EXP,ISO)
tetraphene  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
triptonide  (EXP)
tunicamycin  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
activation of GTPase activity  (ISO,ISS)
angiogenesis  (IEA)
brain-derived neurotrophic factor receptor signaling pathway  (IEA)
cell surface receptor protein tyrosine kinase signaling pathway  (IBA)
cell surface receptor signaling pathway  (ISO,ISS)
chromatin remodeling  (IEA)
collagen-activated tyrosine kinase receptor signaling pathway  (IEA)
ephrin receptor signaling pathway  (IEA)
epidermal growth factor receptor signaling pathway  (IEA)
fibroblast growth factor receptor signaling pathway  (IEA)
hepatocyte growth factor receptor signaling pathway  (IEA)
insulin receptor signaling pathway  (IEA)
insulin-like growth factor receptor signaling pathway  (IEA)
Kit signaling pathway  (IEA)
macrophage colony-stimulating factor signaling pathway  (IEA)
negative regulation of cell migration  (ISO,ISS)
negative regulation of protein kinase activity  (ISO,ISS)
peptidyl-tyrosine phosphorylation  (ISO,ISS)
platelet-derived growth factor receptor-alpha signaling pathway  (IEA)
platelet-derived growth factor receptor-beta signaling pathway  (IEA)
positive regulation of angiogenesis  (ISO,ISS)
positive regulation of cell migration  (ISO,ISS)
positive regulation of cell population proliferation  (ISO,ISS)
positive regulation of cell-matrix adhesion  (ISO,ISS)
positive regulation of stress fiber assembly  (IDA)
protein autophosphorylation  (ISO,ISS)
substrate adhesion-dependent cell spreading  (ISO,ISS)
vascular endothelial growth factor receptor-1 signaling pathway  (IEA)
vascular endothelial growth factor signaling pathway  (IEA)

Cellular Component
plasma membrane  (IBA,ISO,ISS)
receptor complex  (IBA)

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7671812   PMID:8123468   PMID:8552593   PMID:9267020   PMID:9287490   PMID:10207129   PMID:10349636   PMID:10495276   PMID:10508149   PMID:11042159   PMID:11076861   PMID:11114734  
PMID:11439183   PMID:11519828   PMID:12217323   PMID:12477932   PMID:12528186   PMID:12775584   PMID:14681479   PMID:14715945   PMID:15254900   PMID:15761153   PMID:16141072   PMID:16141073  
PMID:16446123   PMID:16466970   PMID:16547242   PMID:16602821   PMID:17039519   PMID:17145500   PMID:18287559   PMID:18802966   PMID:19247962   PMID:19542359   PMID:19769959   PMID:20112066  
PMID:21135133   PMID:21267068   PMID:21677750   PMID:21795402   PMID:21873635   PMID:23686306   PMID:24056079   PMID:24952961   PMID:25073978   PMID:25480914   PMID:26024354   PMID:26644518  
PMID:26941654   PMID:28338017   PMID:28341121   PMID:28558017   PMID:33057926   PMID:35299237   PMID:35927240   PMID:36214254   PMID:37162645  


Genomics

Comparative Map Data
Epha1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39642,335,421 - 42,350,249 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl642,335,421 - 42,350,202 (-)EnsemblGRCm39 Ensembl
GRCm38642,358,487 - 42,373,314 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl642,358,487 - 42,373,268 (-)EnsemblGRCm38mm10GRCm38
MGSCv37642,308,486 - 42,323,267 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36642,288,094 - 42,302,875 (-)NCBIMGSCv36mm8
Celera642,303,129 - 42,317,914 (-)NCBICelera
Cytogenetic Map6B2.1NCBI
cM Map620.65NCBI
EPHA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387143,391,129 - 143,408,856 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7143,390,289 - 143,408,856 (-)EnsemblGRCh38hg38GRCh38
GRCh377143,088,222 - 143,105,949 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367142,798,327 - 142,816,107 (-)NCBINCBI36Build 36hg18NCBI36
Build 347142,605,042 - 142,622,822NCBI
Celera7137,925,469 - 137,943,251 (-)NCBICelera
Cytogenetic Map7q34-q35NCBI
HuRef7137,425,521 - 137,443,246 (-)NCBIHuRef
CHM1_17143,025,132 - 143,041,700 (-)NCBICHM1_1
T2T-CHM13v2.07144,746,556 - 144,764,287 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27142,490,337 - 142,508,118 (-)NCBI
Epha1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8472,213,022 - 72,227,543 (-)NCBIGRCr8
mRatBN7.2471,246,409 - 71,260,920 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl471,246,409 - 71,260,846 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx476,166,330 - 76,180,773 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0472,079,589 - 72,094,032 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0470,499,006 - 70,513,444 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0471,749,100 - 71,763,681 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl471,749,242 - 71,763,679 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04136,553,640 - 136,568,077 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4470,127,872 - 70,142,309 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1470,404,001 - 70,418,438 (-)NCBI
Celera466,176,888 - 66,191,325 (-)NCBICelera
Cytogenetic Map4q24NCBI
Epha1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955494255,162 - 268,777 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955494256,008 - 268,777 (+)NCBIChiLan1.0ChiLan1.0
EPHA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26180,243,561 - 180,261,720 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1732,253,818 - 32,271,977 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07135,385,894 - 135,403,632 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17147,875,028 - 147,892,064 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7147,875,363 - 147,892,745 (-)Ensemblpanpan1.1panPan2
EPHA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1166,287,757 - 6,304,082 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl166,287,910 - 6,304,090 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha167,276,373 - 7,292,601 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0166,141,123 - 6,157,305 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl166,141,091 - 6,157,301 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1166,089,005 - 6,105,222 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0165,940,565 - 5,956,781 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0166,015,778 - 6,032,015 (+)NCBIUU_Cfam_GSD_1.0
Epha1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511812,055,439 - 12,069,849 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936527830,112 - 848,512 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936527833,578 - 847,824 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EPHA1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl186,843,299 - 6,860,989 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1186,843,305 - 6,860,976 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2187,081,296 - 7,098,902 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EPHA1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121112,276,941 - 112,294,505 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21112,277,427 - 112,294,424 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660729,023,000 - 9,040,431 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Epha1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480011,364,848 - 11,380,725 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480011,364,685 - 11,380,725 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:372
Count of miRNA genes:278
Interacting mature miRNAs:308
Transcripts:ENSMUST00000073387
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396633110Mouse
1301266Lmr4_mleishmaniasis resistance 4 (mouse)Not determined64209335876093500Mouse
4140989Spqq2_msperm quality QTL 2 (mouse)Not determined1771159851711719Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080576983Mouse
1357520Axtq2_manxiety QTL 2 (mouse)Not determined6450382348703611Mouse
10043869Cia6a_mcollagen induced arthritis QTL 6a (mouse)Not determined61211797146118069Mouse
11252142Mom12_mModifier of Min 12 (mouse)63387226167872400Mouse
1301850Fglu_mfasting glucose (mouse)Not determined61771159851711719Mouse
4141749Obrq2_mobesity resistance QTL 2 (mouse)Not determined1275122146751333Mouse
1300959Lxw2_mlupus BXSB x NZW 2 (mouse)Not determined63387226167872400Mouse
1300767Aliq4_macute lung injury QTL 4 (mouse)Not determined63627333270273435Mouse
1301724Pcd4ts1_mp-glycoprotein positive CD4 T cell subset 1 (mouse)Not determined61771159851711719Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396633110Mouse
14746995Manh60_mmandible shape 60 (mouse)63720266271202662Mouse
10412107Desp4_mdespair 4 (mouse)Not determined62004983054049830Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414773364675Mouse
4141094Hrtr1_mheart rate 1 (mouse)Not determined3674146370741463Mouse
4141988Obrq3_mobesity resistance QTL 3 (mouse)Not determined2829099362291115Mouse
11353841Bmiq3_mbody mass index QTL 3 (mouse)6450382348703611Mouse
11353840Bmiq2_mbody mass index QTL 2 (mouse)6450382345291115Mouse
1301326Trbv4c2_mT cell receptor beta variable 4 (mouse)Not determined64086823071356155Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487403016Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63864656092584431Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396633110Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396633110Mouse
12904940Edlmmq5_mextensor digitorum longus muscle mass QTL 5 (mouse)61961634653616346Mouse
4141782Mrdq5_mmodifier of retinal degeneration QTL 5 (mouse)Not determined3282758578215957Mouse
12904943Tammq4_mtibialis anterior muscle mass QTL 4 (mouse)61961634653616346Mouse
10412213Sxbq2_mSGC/Knj cross B6 QTL 2 (mouse)Not determined61991268571299759Mouse
12880424V25Dq4_mvitamin D inactive form serum level QTL 4 (mouse)64157698575576985Mouse
12880425V25Dq5_mvitamin D inactive form serum level QTL 5 (mouse)63267698066676980Mouse
1302051Sluc7_msusceptibility to lung cancer 7 (mouse)Not determined6929707443297168Mouse
11040600Lmr4c_mleishmaniasis resistance 4c (mouse)64209335876093500Mouse
4141454Obrq4_mobesity resistance QTL 4 (mouse)Not determined3170349965703611Mouse
11040601Lmr4a_mleishmaniasis resistance 4a (mouse)64209335876093500Mouse
14700690Ccs6_mcolon cancer susceptibility 6 (mouse)62377693457776934Mouse
11533915Mts4_mmammary tumor susceptibility 4 (mouse)64209335876093500Mouse
1357539Bsbob3_mBSB obesity 3 (mouse)Not determined63644845670448576Mouse
27226726Tibmd7_mtibia midshaft diameter 7, 16 week (mouse)61769999953476985Mouse
12904952Gmmq4_mgastrocnemius muscle mass QTL 4 (mouse)61961634653616346Mouse
1357481Aaj2_manxiety in A/J 2 (mouse)Not determined6450382348703611Mouse
1301998Bts2_mbladder tumor susceptibility 2 (mouse)Not determined61275122146751333Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62499999979976983Mouse

Markers in Region
Epha1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37642,313,601 - 42,314,206UniSTSGRCm37
Celera642,308,248 - 42,308,853UniSTS
Cytogenetic Map6B2.1UniSTS
cM Map6 UniSTS
RH124207  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38642,358,577 - 42,358,677UniSTSGRCm38
GRCm381875,288,735 - 75,288,835UniSTSGRCm38
MGSCv371875,448,389 - 75,448,489UniSTSGRCm37
MGSCv37642,308,576 - 42,308,676UniSTSGRCm37
Celera1876,523,330 - 76,523,430UniSTS
Celera642,303,219 - 42,303,319UniSTS
Cytogenetic Map6B2.1UniSTS
Epha1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38642,363,602 - 42,364,207UniSTSGRCm38
MGSCv37642,313,601 - 42,314,206UniSTSGRCm37
Celera642,308,248 - 42,308,853UniSTS
Cytogenetic Map6B2.1UniSTS
cM Map6 UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000073387   ⟹   ENSMUSP00000073099
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl642,335,421 - 42,350,202 (-)Ensembl
GRCm38.p6 Ensembl642,358,487 - 42,373,268 (-)Ensembl
Ensembl Acc Id: ENSMUST00000204238
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl642,343,976 - 42,350,169 (-)Ensembl
GRCm38.p6 Ensembl642,367,042 - 42,373,235 (-)Ensembl
Ensembl Acc Id: ENSMUST00000204357   ⟹   ENSMUSP00000144763
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl642,335,650 - 42,350,202 (-)Ensembl
GRCm38.p6 Ensembl642,358,716 - 42,373,268 (-)Ensembl
RefSeq Acc Id: NM_023580   ⟹   NP_076069
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39642,335,421 - 42,350,202 (-)NCBI
GRCm38642,358,487 - 42,373,268 (-)NCBI
MGSCv37642,308,486 - 42,323,267 (-)RGD
Celera642,303,129 - 42,317,914 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011241203   ⟹   XP_011239505
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39642,339,601 - 42,350,249 (-)NCBI
GRCm38642,362,669 - 42,373,314 (-)NCBI
Sequence:
RefSeq Acc Id: NP_076069   ⟸   NM_023580
- Peptide Label: precursor
- UniProtKB: Q8CED9 (UniProtKB/Swiss-Prot),   Q9ESJ2 (UniProtKB/Swiss-Prot),   Q60750 (UniProtKB/Swiss-Prot),   Q6IR19 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011239505   ⟸   XM_011241203
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSMUSP00000144763   ⟸   ENSMUST00000204357
Ensembl Acc Id: ENSMUSP00000073099   ⟸   ENSMUST00000073387
Protein Domains
Eph LBD   Fibronectin type-III   Protein kinase   SAM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q60750-F1-model_v2 AlphaFold Q60750 1-977 view protein structure

Promoters
RGD ID:6847992
Promoter ID:MM_ACW:41065
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour,   Kidney
Transcripts:EPHA1.CSEP07,   EPHA1.DSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36642,308,851 - 42,309,351 (-)MPROMDB
RGD ID:6849197
Promoter ID:MM_XEF:5908
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:NM_204360
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36642,322,231 - 42,322,731 (-)MPROMDB
RGD ID:6839260
Promoter ID:MM_KWN:45787
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   ES_Cell,   Liver
Transcripts:NM_023580,   UC009BRD.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36642,322,724 - 42,323,224 (-)MPROMDB
RGD ID:6889542
Promoter ID:EPDNEW_M8222
Type:multiple initiation site
Name:Epha1_1
Description:Mus musculus Eph receptor A1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38642,373,268 - 42,373,328EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:107381 AgrOrtholog
Ensembl Genes ENSMUSG00000029859 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000073387 ENTREZGENE
  ENSMUST00000073387.5 UniProtKB/Swiss-Prot
  ENSMUST00000204357.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.50 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ephrin a2 ectodomain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Galactose-binding domain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tumor Necrosis Factor Receptor, subunit A, domain 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Eph_TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EphA1_rcpt_lig-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ephrin_rcpt_lig-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ephrin_rcpt_TKs UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Galactose-bd-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Growth_fac_rcpt_cys_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM/pointed_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr-kin_ephrin_A/B_rcpt-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_kinase_cat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_kinase_ephrin_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_kinase_rcpt_V_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:13835 UniProtKB/Swiss-Prot
MGD MGI:107381 ENTREZGENE
NCBI Gene 13835 ENTREZGENE
PANTHER EPH RECEPTOR A5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EPHRIN TYPE-A RECEPTOR 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam EphA2_TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ephrin_lbd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ephrin_rec_like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  fn3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase_Tyr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Epha1 PhenoGen
PIRSF TyrPK_ephrin_receptor UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS TYRKINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE EGF_2 UniProtKB/Swiss-Prot
  EPH_LBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_TYR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RECEPTOR_TYR_KIN_V_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RECEPTOR_TYR_KIN_V_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART EPH_lbd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ephrin_rec_like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TyrKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47769 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF49265 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF49785 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57184 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SUP4_MOUSE UniProtKB/TrEMBL
  EPHA1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q6IR19 ENTREZGENE, UniProtKB/TrEMBL
  Q8CED9 ENTREZGENE
  Q9CYI2_MOUSE UniProtKB/TrEMBL
  Q9ESJ2 ENTREZGENE
UniProt Secondary Q8CED9 UniProtKB/Swiss-Prot
  Q9ESJ2 UniProtKB/Swiss-Prot