Amfr (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 19 | 11,002,451 - 11,038,182 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 19 | 10,996,705 - 11,032,260 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 19 | 10,996,099 - 11,032,247 (+) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 19 | 11,473,538 - 11,509,500 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 19 | 11,473,541 - 11,508,102 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 19 | 11,447,902 - 11,483,881 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 19 | 11,434,553 - 11,467,592 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 19 | 11,417,443 - 11,471,813 (+) | NCBI | | | | | Celera | 19 | 10,881,564 - 10,916,023 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | p12 | NCBI | | | | |
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AMFR (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 16 | 56,361,452 - 56,425,545 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 16 | 56,361,452 - 56,425,545 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 16 | 56,395,364 - 56,459,457 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 16 | 54,952,865 - 55,016,945 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 16 | 54,952,864 - 55,016,804 | NCBI | | | | | Celera | 16 | 40,892,193 - 40,957,463 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | q13 | NCBI | | | | | HuRef | 16 | 42,266,003 - 42,329,606 (-) | NCBI | | HuRef | | | CHM1_1 | 16 | 57,802,735 - 57,866,433 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 16 | 62,156,498 - 62,220,616 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Amfr (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 8 | 94,698,216 - 94,739,301 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 94,698,216 - 94,739,470 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 93,971,588 - 94,012,640 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 93,971,588 - 94,012,842 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 96,495,488 - 96,536,540 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 96,861,055 - 96,901,971 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 98,301,641 - 98,335,290 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | C5 | NCBI | | | | | cM Map | 8 | 45.96 | NCBI | | | | |
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Amfr (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955433 | 14,172,808 - 14,212,110 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955433 | 14,172,871 - 14,205,484 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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AMFR (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 18 | 65,843,225 - 65,907,259 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 16 | 71,762,368 - 71,826,081 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 16 | 36,647,792 - 36,711,782 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 16 | 55,780,633 - 55,843,738 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 16 | 55,780,633 - 55,843,744 (-) | Ensembl | panpan1.1 | | panPan2 | |
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AMFR (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 2 | 59,766,910 - 59,803,292 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 2 | 59,767,324 - 59,801,883 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 2 | 56,392,079 - 56,436,972 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 2 | 60,303,688 - 60,348,369 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 2 | 60,303,780 - 60,348,358 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 2 | 57,133,765 - 57,178,394 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 2 | 58,142,842 - 58,187,484 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 2 | 59,035,835 - 59,080,467 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Amfr (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024409349 | 50,861,780 - 50,896,114 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936475 | 8,692,844 - 8,727,385 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936475 | 8,692,969 - 8,727,252 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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AMFR (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 6 | 29,366,936 - 29,413,697 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 29,366,812 - 29,417,800 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 26,739,205 - 26,753,523 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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AMFR (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 5 | 42,276,672 - 42,334,508 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 5 | 42,275,584 - 42,334,207 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666047 | 34,030,673 - 34,088,632 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Amfr (Heterocephalus glaber - naked mole-rat) |
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