Slc26a7 (solute carrier family 26 member 7) - Rat Genome Database

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Gene: Slc26a7 (solute carrier family 26 member 7) Rattus norvegicus
Analyze
Symbol: Slc26a7
Name: solute carrier family 26 member 7
RGD ID: 1310846
Description: Predicted to enable inorganic anion transmembrane transporter activity and oxalate transmembrane transporter activity. Predicted to be involved in several processes, including nitrate transmembrane transport; organic anion transport; and thyroid hormone generation. Predicted to act upstream of or within chloride transport. Located in basolateral plasma membrane. Orthologous to human SLC26A7 (solute carrier family 26 member 7); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: anion exchange transporter; LOC297910; solute carrier family 26 (anion exchanger), member 7; solute carrier family 26, member 7
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8532,681,653 - 32,819,110 (-)NCBIGRCr8
mRatBN7.2527,884,400 - 28,021,865 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl527,887,042 - 28,021,658 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx530,028,810 - 30,164,100 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0531,621,448 - 31,756,752 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0531,581,606 - 31,716,918 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0527,986,656 - 28,131,294 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl527,986,663 - 28,177,340 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0532,676,375 - 32,816,664 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4528,899,539 - 29,035,178 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1528,899,654 - 29,034,843 (-)NCBI
Celera527,155,652 - 27,282,161 (-)NCBICelera
Cytogenetic Map5q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Regulation of the basolateral chloride/base exchangers AE1 and SLC26A7 in the kidney collecting duct in potassium depletion. Barone S, etal., Nephrol Dial Transplant. 2007 Dec;22(12):3462-70. Epub 2007 Sep 5.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1183472   PMID:11834742   PMID:12736153   PMID:15591059   PMID:16352747   PMID:16524946   PMID:17404755   PMID:18663336   PMID:26671068   PMID:35644541  


Genomics

Comparative Map Data
Slc26a7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8532,681,653 - 32,819,110 (-)NCBIGRCr8
mRatBN7.2527,884,400 - 28,021,865 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl527,887,042 - 28,021,658 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx530,028,810 - 30,164,100 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0531,621,448 - 31,756,752 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0531,581,606 - 31,716,918 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0527,986,656 - 28,131,294 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl527,986,663 - 28,177,340 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0532,676,375 - 32,816,664 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4528,899,539 - 29,035,178 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1528,899,654 - 29,034,843 (-)NCBI
Celera527,155,652 - 27,282,161 (-)NCBICelera
Cytogenetic Map5q13NCBI
SLC26A7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38891,209,496 - 91,398,155 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl891,209,494 - 91,398,155 (+)EnsemblGRCh38hg38GRCh38
GRCh37892,221,724 - 92,410,383 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36892,330,692 - 92,479,554 (+)NCBINCBI36Build 36hg18NCBI36
Build 34892,330,691 - 92,476,122NCBI
Celera888,455,583 - 88,604,581 (+)NCBICelera
Cytogenetic Map8q21.3NCBI
HuRef887,472,771 - 87,621,653 (+)NCBIHuRef
CHM1_1892,302,075 - 92,450,906 (+)NCBICHM1_1
T2T-CHM13v2.0892,334,433 - 92,523,083 (+)NCBIT2T-CHM13v2.0
Slc26a7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39414,502,430 - 14,621,946 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl414,502,430 - 14,621,805 (-)EnsemblGRCm39 Ensembl
GRCm38414,502,430 - 14,621,946 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl414,502,430 - 14,621,805 (-)EnsemblGRCm38mm10GRCm38
MGSCv37414,432,344 - 14,548,925 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36414,432,344 - 14,548,904 (-)NCBIMGSCv36mm8
Celera414,304,930 - 14,422,336 (-)NCBICelera
Cytogenetic Map4A1NCBI
cM Map46.24NCBI
Slc26a7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554177,987,835 - 8,127,729 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554177,977,292 - 8,127,241 (+)NCBIChiLan1.0ChiLan1.0
SLC26A7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27108,615,431 - 108,764,187 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1884,154,648 - 84,303,490 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0887,908,807 - 88,057,623 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1889,861,300 - 90,009,899 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl889,861,279 - 90,009,899 (+)Ensemblpanpan1.1panPan2
SLC26A7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12936,616,054 - 36,729,705 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2936,615,676 - 36,726,803 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2936,768,037 - 36,881,698 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02936,817,996 - 36,931,302 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2936,818,069 - 36,931,262 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12936,836,949 - 36,950,596 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02936,818,733 - 36,931,876 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02937,257,966 - 37,371,852 (+)NCBIUU_Cfam_GSD_1.0
Slc26a7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530342,849,303 - 42,949,574 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365444,843,116 - 4,945,789 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365444,843,156 - 4,943,402 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC26A7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl445,448,889 - 45,637,389 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1445,410,795 - 45,637,500 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2449,029,845 - 49,138,217 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC26A7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1886,281,314 - 86,454,970 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl886,311,373 - 86,454,960 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603954,408,693 - 54,582,100 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc26a7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624744603,123 - 750,121 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624744600,137 - 750,505 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc26a7
891 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:335
Count of miRNA genes:205
Interacting mature miRNAs:234
Transcripts:ENSRNOT00000067331
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)572947086724018Rat
2312562Pur18Proteinuria QTL 182.60.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)5213896532656739Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5228222669540447Rat
1300117Hrtrt8Heart rate QTL 83.49heart pumping trait (VT:2000009)heart rate (CMO:0000002)5384401847869213Rat
61462Niddm10Non-insulin dependent diabetes mellitus QTL 103.90.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)5511215947171491Rat
2293666Bmd38Bone mineral density QTL 384.4femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)5894822853948228Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
1641903Alcrsp3Alcohol response QTL 3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)51268928557689285Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
1600358Mamtr5Mammary tumor resistance QTL 5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)51887394763873947Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)51887394774251464Rat
8552954Pigfal14Plasma insulin-like growth factor 1 level QTL 149blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)52122674466226744Rat
1549901Neudeg2Neurodegradation QTL 240nervous system integrity trait (VT:0010566)mononuclear cell count (CMO:0002119)52483871044045280Rat
1578767Stresp17Stress response QTL 174.30.01blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)52795544072955440Rat
1578776Stresp18Stress response QTL 182.9thymus mass (VT:0004954)thymus wet weight (CMO:0000855)52795544072955440Rat

Markers in Region
D5Arb22  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2528,013,259 - 28,013,437 (+)MAPPERmRatBN7.2
Rnor_6.0528,122,739 - 28,122,916NCBIRnor6.0
Rnor_5.0532,808,069 - 32,808,246UniSTSRnor5.0
RGSC_v3.4529,026,739 - 29,026,917RGDRGSC3.4
RGSC_v3.4529,026,740 - 29,026,917UniSTSRGSC3.4
RGSC_v3.1529,026,739 - 29,026,917RGD
Celera527,273,782 - 27,273,959UniSTS
Cytogenetic Map5q13UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 8 14
Low 2 6 3 3 63 27 26 3
Below cutoff 1 16 22 8 9 8 4 4 7 1 7 4

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001106638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006237911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006237912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006237913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008763530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008763531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039109418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039109419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039109421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039109422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063287289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063287290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063287291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063287292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000067331   ⟹   ENSRNOP00000058989
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl527,887,042 - 28,021,658 (-)Ensembl
Rnor_6.0 Ensembl527,989,298 - 28,131,133 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000088165   ⟹   ENSRNOP00000074966
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl527,986,663 - 28,164,326 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000093186   ⟹   ENSRNOP00000076092
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl527,887,042 - 28,021,658 (-)Ensembl
Rnor_6.0 Ensembl527,987,414 - 28,130,803 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000093409   ⟹   ENSRNOP00000076107
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl527,887,042 - 28,021,658 (-)Ensembl
Rnor_6.0 Ensembl528,006,549 - 28,177,340 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000106456   ⟹   ENSRNOP00000094547
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl527,935,356 - 28,021,658 (-)Ensembl
RefSeq Acc Id: NM_001106638   ⟹   NP_001100108
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8532,684,271 - 32,818,905 (-)NCBI
mRatBN7.2527,887,025 - 28,021,658 (-)NCBI
Rnor_6.0527,989,281 - 28,131,133 (-)NCBI
Rnor_5.0532,676,375 - 32,816,664 (-)NCBI
RGSC_v3.4528,899,539 - 29,035,178 (-)RGD
Celera527,155,652 - 27,282,161 (-)RGD
Sequence:
RefSeq Acc Id: XM_006237911   ⟹   XP_006237973
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8532,681,653 - 32,819,108 (-)NCBI
mRatBN7.2527,884,400 - 28,021,863 (-)NCBI
Rnor_6.0527,986,656 - 28,131,293 (-)NCBI
Rnor_5.0532,676,375 - 32,816,664 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008763531   ⟹   XP_008761753
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8532,681,653 - 32,819,110 (-)NCBI
mRatBN7.2527,884,400 - 28,021,865 (-)NCBI
Rnor_6.0527,986,656 - 28,131,294 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039109418   ⟹   XP_038965346
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8532,681,653 - 32,819,107 (-)NCBI
mRatBN7.2527,884,400 - 28,021,862 (-)NCBI
RefSeq Acc Id: XM_039109419   ⟹   XP_038965347
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8532,681,653 - 32,819,107 (-)NCBI
mRatBN7.2527,884,400 - 28,021,862 (-)NCBI
RefSeq Acc Id: XM_039109421   ⟹   XP_038965349
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8532,681,653 - 32,796,062 (-)NCBI
mRatBN7.2527,884,400 - 27,998,783 (-)NCBI
RefSeq Acc Id: XM_039109422   ⟹   XP_038965350
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8532,681,653 - 32,782,153 (-)NCBI
mRatBN7.2527,884,400 - 27,984,875 (-)NCBI
RefSeq Acc Id: XM_063287289   ⟹   XP_063143359
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8532,681,653 - 32,818,815 (-)NCBI
RefSeq Acc Id: XM_063287290   ⟹   XP_063143360
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8532,681,653 - 32,818,815 (-)NCBI
RefSeq Acc Id: XM_063287291   ⟹   XP_063143361
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8532,681,653 - 32,819,108 (-)NCBI
RefSeq Acc Id: XM_063287292   ⟹   XP_063143362
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8532,681,653 - 32,819,109 (-)NCBI
RefSeq Acc Id: NP_001100108   ⟸   NM_001106638
- UniProtKB: D3Z8P6 (UniProtKB/TrEMBL),   A6II93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006237973   ⟸   XM_006237911
- Peptide Label: isoform X2
- UniProtKB: A0A1W2Q625 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008761753   ⟸   XM_008763531
- Peptide Label: isoform X4
- UniProtKB: D3Z8P6 (UniProtKB/TrEMBL),   A6II93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000058989   ⟸   ENSRNOT00000067331
RefSeq Acc Id: ENSRNOP00000076107   ⟸   ENSRNOT00000093409
RefSeq Acc Id: ENSRNOP00000076092   ⟸   ENSRNOT00000093186
RefSeq Acc Id: ENSRNOP00000074966   ⟸   ENSRNOT00000088165
RefSeq Acc Id: XP_038965347   ⟸   XM_039109419
- Peptide Label: isoform X1
- UniProtKB: A0A1W2Q610 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038965346   ⟸   XM_039109418
- Peptide Label: isoform X1
- UniProtKB: A0A1W2Q610 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038965349   ⟸   XM_039109421
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038965350   ⟸   XM_039109422
- Peptide Label: isoform X6
RefSeq Acc Id: ENSRNOP00000094547   ⟸   ENSRNOT00000106456
RefSeq Acc Id: XP_063143362   ⟸   XM_063287292
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063143361   ⟸   XM_063287291
- Peptide Label: isoform X2
- UniProtKB: A0A1W2Q625 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063143360   ⟸   XM_063287290
- Peptide Label: isoform X2
- UniProtKB: A0A1W2Q625 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063143359   ⟸   XM_063287289
- Peptide Label: isoform X1
- UniProtKB: A0A1W2Q610 (UniProtKB/TrEMBL)
Protein Domains
SLC26A/SulP transporter   STAS

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A1W2Q610-F1-model_v2 AlphaFold A0A1W2Q610 1-656 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693574
Promoter ID:EPDNEW_R4099
Type:single initiation site
Name:Slc26a7_1
Description:solute carrier family 26 member 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0528,131,154 - 28,131,214EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310846 AgrOrtholog
BioCyc Gene G2FUF-41893 BioCyc
Ensembl Genes ENSRNOG00000006096 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000067331 ENTREZGENE
  ENSRNOT00000067331.4 UniProtKB/TrEMBL
  ENSRNOT00000093186.2 UniProtKB/TrEMBL
  ENSRNOT00000093409.2 UniProtKB/TrEMBL
  ENSRNOT00000106456.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.750.24 UniProtKB/TrEMBL
InterPro SO4_transptr/STAS UniProtKB/TrEMBL
  STAS_dom_sf UniProtKB/TrEMBL
  Sul_anion_transpt UniProtKB/TrEMBL
  Sulph_transpt UniProtKB/TrEMBL
KEGG Report rno:297910 UniProtKB/TrEMBL
NCBI Gene 297910 ENTREZGENE
PANTHER PTHR11814 UniProtKB/TrEMBL
  PTHR11814:SF75 UniProtKB/TrEMBL
Pfam STAS UniProtKB/TrEMBL
  Sulfate_transp UniProtKB/TrEMBL
PhenoGen Slc26a7 PhenoGen
PROSITE STAS UniProtKB/TrEMBL
RatGTEx ENSRNOG00000006096 RatGTEx
Superfamily-SCOP STAS UniProtKB/TrEMBL
UniProt A0A1W2Q610 ENTREZGENE, UniProtKB/TrEMBL
  A0A1W2Q625 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AL80_RAT UniProtKB/TrEMBL
  A6II93 ENTREZGENE, UniProtKB/TrEMBL
  D3Z8P6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-24 Slc26a7  solute carrier family 26 member 7  Slc26a7  solute carrier family 26 (anion exchanger), member 7  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-08-02 Slc26a7  solute carrier family 26 (anion exchanger), member 7  Slc26a7  solute carrier family 26, member 7  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Slc26a7  solute carrier family 26, member 7   Slc26a7_predicted  solute carrier family 26, member 7 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Slc26a7_predicted  solute carrier family 26, member 7 (predicted)      Symbol and Name status set to approved 70820 APPROVED