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Gene: Sytl1 (synaptotagmin-like 1) Rattus norvegicus
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Symbol: Sytl1
Name: synaptotagmin-like 1
Description: Predicted to have neurexin family protein binding activity. Predicted to be involved in exocytosis. Predicted to localize to the exocytic vesicle; extrinsic component of plasma membrane; and melanosome. Orthologous to human SYTL1 (synaptotagmin like 1); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; amphetamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: exophilin-7; LOC297872; MGC112642; Slp-1; synaptotagmin-like protein 1
Orthologs:
Homo sapiens (human) : SYTL1 (synaptotagmin like 1)  HGNC  Alliance
Mus musculus (house mouse) : Sytl1 (synaptotagmin-like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sytl1 (synaptotagmin like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SYTL1 (synaptotagmin like 1)
Canis lupus familiaris (dog) : SYTL1 (synaptotagmin like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sytl1 (synaptotagmin like 1)
Sus scrofa (pig) : SYTL1 (synaptotagmin like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05151,448,639 - 151,459,870 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5151,448,617 - 151,459,093 (-)Ensembl
Rnor_5.05155,113,812 - 155,124,357 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45151,862,910 - 151,873,307 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15151,872,948 - 151,883,346 (+)NCBI
Celera5143,873,884 - 143,884,366 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sytl1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310715
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.