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Gene: Lmcd1 (LIM and cysteine-rich domains 1) Rattus norvegicus
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Symbol: Lmcd1
Name: LIM and cysteine-rich domains 1
Description: Predicted to have transcription corepressor activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II; positive regulation of calcineurin-NFAT signaling cascade; and regulation of cardiac muscle hypertrophy. Predicted to localize to the nucleus. Orthologous to human LMCD1 (LIM and cysteine rich domains 1); INTERACTS WITH 1-naphthyl isothiocyanate; 3,3',4,4',5-pentachlorobiphenyl; 6-phenylpteridine-2,4,7-triamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: dyxin; LIM and cysteine-rich domains protein 1; LIMD1; LOC362411
Orthologs:
Homo sapiens (human) : LMCD1 (LIM and cysteine rich domains 1)  HGNC  Alliance
Mus musculus (house mouse) : Lmcd1 (LIM and cysteine-rich domains 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lmcd1 (LIM and cysteine rich domains 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LMCD1 (LIM and cysteine rich domains 1)
Canis lupus familiaris (dog) : LMCD1 (LIM and cysteine rich domains 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lmcd1 (LIM and cysteine rich domains 1)
Sus scrofa (pig) : LMCD1 (LIM and cysteine rich domains 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04144,192,989 - 144,252,554 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04207,494,655 - 207,554,220 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44148,071,431 - 148,130,313 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14148,316,271 - 148,375,153 (+)NCBI
Celera4133,994,893 - 134,022,583 (+)NCBICelera
Cytogenetic Map4q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Lmcd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308963
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.