Coq8a (coenzyme Q8A) - Rat Genome Database

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Gene: Coq8a (coenzyme Q8A) Rattus norvegicus
Analyze
Symbol: Coq8a
Name: coenzyme Q8A
RGD ID: 1308245
Description: Predicted to enable ADP binding activity and kinase activity. Predicted to be involved in phosphorylation and ubiquinone biosynthetic process. Predicted to be located in mitochondrion. Predicted to be extrinsic component of mitochondrial inner membrane. Human ortholog(s) of this gene implicated in primary coenzyme Q10 deficiency 4. Orthologous to human COQ8A (coenzyme Q8A); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 3,3',4,4',5-pentachlorobiphenyl.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: aarF domain containing kinase 3; aarF domain-containing protein kinase 3; Adck3; atypical kinase ADCK3, mitochondrial; atypical kinase COQ8A, mitochondrial; Cabc1; chaperone activity of bc1 complex-like; chaperone activity of bc1 complex-like, mitochondrial; chaperone, ABC1 activity of bc1 complex homolog; chaperone, ABC1 activity of bc1 complex homolog (S. pombe); chaperone, ABC1 activity of bc1 complex like; chaperone, ABC1 activity of bc1 complex like (S. pombe); chaperone-ABC1-like; coenzyme Q protein 8A; LOC360887; MGC109473
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21391,904,731 - 91,933,588 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1391,904,739 - 91,931,431 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1394,409,919 - 94,436,615 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01395,810,087 - 95,836,779 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01392,984,796 - 93,011,486 (-)NCBIRnor_WKY
Rnor_6.01398,451,629 - 98,480,438 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1398,451,637 - 98,480,419 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013103,459,488 - 103,488,382 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41395,869,376 - 95,896,742 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11396,058,311 - 96,085,678 (-)NCBI
Celera1391,452,681 - 91,479,411 (-)NCBICelera
Cytogenetic Map13q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (ISO)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
acetamide  (EXP)
aflatoxin B1  (ISO)
ammonium chloride  (EXP)
aristolochic acid  (ISO)
artesunate  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
beta-naphthoflavone  (EXP)
bisphenol A  (EXP)
bisphenol F  (ISO)
C60 fullerene  (EXP)
cadmium atom  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
carbonyl cyanide p-trifluoromethoxyphenylhydrazone  (ISO)
chrysene  (ISO)
cisplatin  (ISO)
clofibric acid  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
dibutyl phthalate  (EXP)
doxorubicin  (ISO)
endosulfan  (EXP)
epoxiconazole  (ISO)
ethanol  (ISO)
ethyl methanesulfonate  (ISO)
flutamide  (EXP)
formaldehyde  (ISO)
fulvestrant  (ISO)
furan  (EXP)
gentamycin  (EXP)
glafenine  (EXP)
hydrogen peroxide  (ISO)
ketamine  (EXP)
kojic acid  (ISO)
methamphetamine  (ISO)
methyl methanesulfonate  (ISO)
N-nitrosodiethylamine  (EXP)
nefazodone  (EXP)
nimesulide  (EXP)
paracetamol  (EXP,ISO)
phenobarbital  (ISO)
piperonyl butoxide  (EXP)
pirinixic acid  (ISO)
piroxicam  (ISO)
resveratrol  (ISO)
rotenone  (EXP)
silicon dioxide  (ISO)
sodium fluoride  (ISO)
Soman  (EXP)
tamoxifen  (ISO)
temozolomide  (ISO)
tetrachloromethane  (EXP,ISO)
tetraphene  (ISO)
thapsigargin  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
Tributyltin oxide  (ISO)
trichloroethene  (EXP)
tunicamycin  (ISO)
ubiquinones  (ISO)
valproic acid  (ISO)
vancomycin  (ISO)
vinclozolin  (EXP)
zinc atom  (EXP)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:15489334   PMID:18614015   PMID:20580948   PMID:25498144   PMID:26316108   PMID:27499294  


Genomics

Comparative Map Data
Coq8a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21391,904,731 - 91,933,588 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1391,904,739 - 91,931,431 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1394,409,919 - 94,436,615 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01395,810,087 - 95,836,779 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01392,984,796 - 93,011,486 (-)NCBIRnor_WKY
Rnor_6.01398,451,629 - 98,480,438 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1398,451,637 - 98,480,419 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013103,459,488 - 103,488,382 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41395,869,376 - 95,896,742 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11396,058,311 - 96,085,678 (-)NCBI
Celera1391,452,681 - 91,479,411 (-)NCBICelera
Cytogenetic Map13q26NCBI
COQ8A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381226,940,294 - 226,987,544 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1226,940,286 - 226,987,544 (+)EnsemblGRCh38hg38GRCh38
GRCh371227,127,995 - 227,175,245 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361225,194,561 - 225,241,869 (+)NCBINCBI36Build 36hg18NCBI36
Build 341223,434,723 - 223,481,979NCBI
Celera1200,318,754 - 200,366,064 (+)NCBICelera
Cytogenetic Map1q42.13NCBI
HuRef1197,644,481 - 197,691,835 (+)NCBIHuRef
CHM1_11228,400,721 - 228,447,734 (+)NCBICHM1_1
T2T-CHM13v2.01226,128,212 - 226,175,909 (+)NCBIT2T-CHM13v2.0
Coq8a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391179,992,803 - 180,023,585 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1179,992,803 - 180,027,167 (-)EnsemblGRCm39 Ensembl
GRCm381180,165,238 - 180,196,020 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1180,165,238 - 180,199,602 (-)EnsemblGRCm38mm10GRCm38
MGSCv371182,095,369 - 182,126,151 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361182,001,815 - 182,032,687 (-)NCBIMGSCv36mm8
Celera1187,227,199 - 187,260,762 (-)NCBICelera
Cytogenetic Map1H4NCBI
Coq8a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540610,180,415 - 10,217,505 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540610,180,415 - 10,217,450 (-)NCBIChiLan1.0ChiLan1.0
COQ8A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11207,390,883 - 207,436,008 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1207,390,883 - 207,436,008 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01202,398,986 - 202,446,255 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
COQ8A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1738,085,441 - 38,123,037 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl738,085,885 - 38,122,974 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha737,568,104 - 37,605,640 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0737,920,065 - 37,957,603 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl737,919,586 - 37,957,561 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1737,759,043 - 37,796,576 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0737,766,177 - 37,803,725 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0738,036,583 - 38,074,123 (-)NCBIUU_Cfam_GSD_1.0
Coq8a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934451,063,067 - 51,098,871 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365263,648,386 - 3,684,238 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049365263,648,447 - 3,684,230 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
COQ8A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1014,596,599 - 14,643,772 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11014,597,237 - 14,643,394 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21017,096,715 - 17,114,950 (+)NCBISscrofa10.2Sscrofa10.2susScr3
COQ8A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1252,780,593 - 2,827,565 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl252,779,504 - 2,826,538 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660552,745,315 - 2,814,504 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Coq8a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477112,274,812 - 12,316,587 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477112,274,812 - 12,315,007 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Coq8a
125 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:85
Count of miRNA genes:72
Interacting mature miRNAs:81
Transcripts:ENSRNOT00000030135
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)135236217197362171Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1361825626106807694Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1365103704106807694Rat
8655959Pur32Proteinuria QTL 328.4urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137402391897213863Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1374862117101339893Rat
4889606Gluco63Glucose level QTL 632.860.003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1380753256106807694Rat

Markers in Region
RH129588  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21391,904,738 - 91,904,921 (+)MAPPERmRatBN7.2
Rnor_6.01398,451,637 - 98,451,819NCBIRnor6.0
Rnor_5.013103,459,496 - 103,459,678UniSTSRnor5.0
RGSC_v3.41395,869,376 - 95,869,558UniSTSRGSC3.4
Celera1391,452,681 - 91,452,863UniSTS
RH 3.4 Map13616.1UniSTS
Cytogenetic Map13q26UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 29 51 35 19 35 8 11 29 29 32 11 8
Low 14 6 6 6 45 6 9
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000030135   ⟹   ENSRNOP00000036948
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1391,904,739 - 91,931,431 (-)Ensembl
Rnor_6.0 Ensembl1398,451,637 - 98,478,327 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000086306   ⟹   ENSRNOP00000070234
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1391,904,739 - 91,931,431 (-)Ensembl
Rnor_6.0 Ensembl1398,451,942 - 98,480,419 (-)Ensembl
RefSeq Acc Id: NM_001013185   ⟹   NP_001013203
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21391,904,739 - 91,931,431 (-)NCBI
Rnor_6.01398,451,637 - 98,478,327 (-)NCBI
Rnor_5.013103,459,488 - 103,488,382 (-)NCBI
RGSC_v3.41395,869,376 - 95,896,742 (-)RGD
Celera1391,452,681 - 91,479,411 (-)RGD
Sequence:
RefSeq Acc Id: XM_006250387   ⟹   XP_006250449
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21391,904,731 - 91,933,588 (-)NCBI
Rnor_6.01398,451,629 - 98,480,438 (-)NCBI
Rnor_5.013103,459,488 - 103,488,382 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039090922   ⟹   XP_038946850
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21391,904,731 - 91,932,321 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001013203 (Get FASTA)   NCBI Sequence Viewer  
  XP_006250449 (Get FASTA)   NCBI Sequence Viewer  
  XP_038946850 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH91388 (Get FASTA)   NCBI Sequence Viewer  
  EDL94818 (Get FASTA)   NCBI Sequence Viewer  
  Q5BJQ0 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001013203   ⟸   NM_001013185
- UniProtKB: Q5BJQ0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006250449   ⟸   XM_006250387
- Peptide Label: isoform X1
- UniProtKB: Q5BJQ0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSRNOP00000036948   ⟸   ENSRNOT00000030135
RefSeq Acc Id: ENSRNOP00000070234   ⟸   ENSRNOT00000086306
RefSeq Acc Id: XP_038946850   ⟸   XM_039090922
- Peptide Label: isoform X1
- UniProtKB: Q5BJQ0 (UniProtKB/Swiss-Prot)
Protein Domains
ABC1   Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5BJQ0-F1-model_v2 AlphaFold Q5BJQ0 1-649 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699056
Promoter ID:EPDNEW_R9581
Type:single initiation site
Name:Coq8a_2
Description:coenzyme Q8A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R9582  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01398,478,351 - 98,478,411EPDNEW
RGD ID:13699067
Promoter ID:EPDNEW_R9582
Type:initiation region
Name:Coq8a_1
Description:coenzyme Q8A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R9581  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01398,480,418 - 98,480,478EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308245 AgrOrtholog
BioCyc Gene G2FUF-17133 BioCyc
Ensembl Genes ENSRNOG00000043201 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000036948 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOP00000070234.2 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000030135 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOT00000086306.2 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7321446 IMAGE-MGC_LOAD
InterPro ABC1_dom UniProtKB/TrEMBL
  ADCK3_dom UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
  COQ8A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UbiB_dom UniProtKB/Swiss-Prot
KEGG Report rno:360887 UniProtKB/Swiss-Prot
MGC_CLONE MGC:109473 IMAGE-MGC_LOAD
NCBI Gene 360887 ENTREZGENE
PANTHER PTHR43851:SF1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ABC1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Coq8a PhenoGen
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8L2R303_RAT UniProtKB/TrEMBL
  COQ8A_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-07-21 Coq8a  coenzyme Q8A  Adck3  aarF domain containing kinase 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-07-29 Adck3  aarF domain containing kinase 3  Cabc1  chaperone, ABC1 activity of bc1 complex homolog (S. pombe)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-29 Cabc1  chaperone, ABC1 activity of bc1 complex homolog (S. pombe)  Cabc1  chaperone, ABC1 activity of bc1 complex like (S. pombe)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Cabc1  chaperone, ABC1 activity of bc1 complex like (S. pombe)  Cabc1_predicted  chaperone, ABC1 activity of bc1 complex like (S. pombe) (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Cabc1_predicted  chaperone, ABC1 activity of bc1 complex like (S. pombe) (predicted)      Symbol and Name status set to approved 70820 APPROVED