Coq8a (coenzyme Q8A) - Rat Genome Database

Name: Coq8a
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: Coq8a (coenzyme Q8A) Ictidomys tridecemlineatus

Analyze

Symbol:

Coq8a

Name:

coenzyme Q8A

RGD ID:

12658131

Description:

ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN phosphorylation (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH autosomal recessive cerebellar ataxia (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); cerebellar ataxia (ortholog); FOUND IN membrane (inferred); mitochondrion (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

aarF domain containing kinase 3; Adck3; atypical kinase ADCK3, mitochondrial; atypical kinase COQ8A, mitochondrial; coenzyme Q8A, transcript variant X1; coenzyme Q8A, transcript variant X2; coenzyme Q8A, transcript variant X3; coenzyme Q8A, transcript variant X4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	COQ8A (coenzyme Q8A)	NCBI	Ortholog
Mus musculus (house mouse):	Coq8a (coenzyme Q8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Coq8a (coenzyme Q8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Coq8a (coenzyme Q8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	COQ8A (coenzyme Q8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	COQ8A (coenzyme Q8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	COQ8A (coenzyme Q8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	COQ8A (coenzyme Q8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Coq8a (coenzyme Q8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	51,063,067 - 51,098,871 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936526	3,648,386 - 3,684,238 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936526	3,648,447 - 3,684,230 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive cerebellar ataxia (ISO)

autosomal recessive nonsyndromic deafness 9 (ISO)

cerebellar ataxia (ISO)

coenzyme Q10 deficiency disease (ISO)

Developmental Disabilities (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

Joubert Syndrome 17 (ISO)

mitochondrial metabolism disease (ISO)

Nervous System Malformations (ISO)

parathyroid carcinoma (ISO)

pathologic nystagmus (ISO)

primary coenzyme Q10 deficiency 1 (ISO)

primary coenzyme Q10 deficiency 4 (ISO)

Spinocerebellar Ataxias (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

phosphorylation (ISO)

protein phosphorylation (ISO)

ubiquinone biosynthetic process (IEA)

Cellular Component

membrane (IEA)

mitochondrion (IEA)

Molecular Function

ADP binding (IEA)

kinase activity (IEA)

protein binding (ISO)

protein kinase activity (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Coq8a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	51,063,067 - 51,098,871 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936526	3,648,386 - 3,684,238 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936526	3,648,447 - 3,684,230 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

COQ8A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	226,940,294 - 226,987,544 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	226,940,286 - 226,987,544 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	227,127,995 - 227,175,245 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	225,194,561 - 225,241,869 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	223,434,723 - 223,481,979	NCBI
Celera	1	200,318,754 - 200,366,064 (+)	NCBI		Celera
Cytogenetic Map	1	q42.13	NCBI
HuRef	1	197,644,481 - 197,691,835 (+)	NCBI		HuRef
CHM1_1	1	228,400,721 - 228,447,734 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	226,128,212 - 226,175,909 (+)	NCBI		T2T-CHM13v2.0

Coq8a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	179,992,803 - 180,023,585 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	179,992,803 - 180,027,167 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	180,165,238 - 180,196,020 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	180,165,238 - 180,199,602 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	182,095,369 - 182,126,151 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	182,001,815 - 182,032,687 (-)	NCBI		MGSCv36	mm8
Celera	1	187,227,199 - 187,260,762 (-)	NCBI		Celera
Cytogenetic Map	1	H4	NCBI
cM Map	1	84.15	NCBI

Coq8a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	94,436,680 - 94,465,535 (-)	NCBI		GRCr8
mRatBN7.2	13	91,904,731 - 91,933,588 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	91,904,739 - 91,931,431 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	94,409,919 - 94,436,615 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	95,810,087 - 95,836,779 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	92,984,796 - 93,011,486 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	98,451,629 - 98,480,438 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	98,451,637 - 98,480,419 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	103,459,488 - 103,488,382 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	95,869,376 - 95,896,742 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	96,058,311 - 96,085,678 (-)	NCBI
Celera	13	91,452,681 - 91,479,411 (-)	NCBI		Celera
Cytogenetic Map	13	q26	NCBI

Coq8a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	10,180,415 - 10,217,505 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	10,180,415 - 10,217,450 (-)	NCBI	ChiLan1.0	ChiLan1.0

COQ8A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	22,552,550 - 22,600,426 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	22,500,916 - 22,548,235 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	202,398,986 - 202,446,255 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	207,390,883 - 207,436,008 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	207,390,883 - 207,436,008 (+)	Ensembl	panpan1.1		panPan2

COQ8A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	38,085,441 - 38,123,037 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	38,085,885 - 38,122,974 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	37,568,104 - 37,605,640 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	37,920,065 - 37,957,603 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	37,919,586 - 37,957,561 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	37,759,043 - 37,796,576 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	37,766,177 - 37,803,725 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	38,036,583 - 38,074,123 (-)	NCBI		UU_Cfam_GSD_1.0

COQ8A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	14,596,599 - 14,643,772 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	14,597,237 - 14,643,394 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	17,096,715 - 17,114,950 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

COQ8A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	2,780,593 - 2,827,565 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	2,779,504 - 2,826,538 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	2,745,315 - 2,814,504 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Coq8a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624771	12,274,812 - 12,316,587 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624771	12,274,812 - 12,315,007 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005326548	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005326549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013359201	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013359202	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040276923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040276924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010004404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000015410 ⟹ ENSSTOP00000013800

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936526	3,648,386 - 3,684,238 (+)	Ensembl

RefSeq Acc Id:

XM_005326548 ⟹ XP_005326605

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	51,063,067 - 51,098,871 (-)	NCBI
SpeTri2.0	NW_004936526	3,648,447 - 3,684,230 (+)	NCBI

Sequence:

show sequence

CCAGTCAACGCGGGGCCTCATAGGGCGCCAGCGAGTATGGTAAACAGACCCCGAGCGCGTGTTA
GGCGCCCGCGTTGGCACGTACGGAGCGGCGCGAAGGTGACCGAGATCTCAGCTTAGTGCCTCCG
GGTCCCCTCCTACCGTGTGTCTGGGAACTCTAACTGCTTGTGCTGCAGCCCTGAAGGACGGCTG
CCATGTTGGGGGATGCCATAATGGTGGCCAAAGGCCTTGCCAAGCTGACCCAGGCGGCCATGGA
AACCCACCTGCAGCACTTGGGCCTTGGTGGGGAGCTCATCATGGCCGCCAGAGCTCTGCAGTCC
ACAGCTGTGGAGCAGATTGGCACGGTCTTGGGGAAGGTACAGGGTCGGGATATGTATGGAGAGA
CTGAGGCCACTGAGAGCTTTGACGACCTGGAAGCAGAGGTCCACTTCTCAGGGACACAGGCGTC
TGGATCTTCTGCAGACTTCTCTGTCACCTCCTCTCTTGACCAGTCACTGTCTCCTCCTCTGGGT
CACGCCCACAGCGAGGGCCCAGCTCCTGCCTATGTTGCCAGTGGACCCTTTAGGGAAACTGGGC
TCCCGGACCAGGGAGCCTCCCCTCTGGGCAGAGTTAACGGGAAGCTCTTTGCAGAACCCAGAGA
CTTATTCTCTGCTCCCGGCTTCCAGCGAAGGTTCTTCCACCAGGACCAGTCCCCACTGGGGGGC
CTCACGGCTGAGGACATTGAGAAGGCTCGGCAGGCCAAGGGTCGCCCTGAGAGCAAACCACACA
AGCAGATGCTCAGTGAGCGGGCTCGGGAGCGGAAGGTGCCAGTTACACGAATTGGGCGGCTGGC
CAACTTTGGAGGTCTGGCCGTGGGCCTGGGCTTTGGGGCACTGGCGGAGGTTGCCAAGAAGAGT
CTGCGCCCTGAGACCACAGGGAAGAAAGCTGTGCTGGATTCCAGCCCCTTCCTGTCAGAAGCGA
ATGCAGAGCGCATTGTGAGCACGCTGTGCAAGGTGCGTGGGGCAGCGCTGAAGCTGGGCCAGAT
GCTGAGCATCCAGGACGACGCCTTCATCAACCCCCATCTGGCCAGGATCTTCGAGCGGGTGCGG
CAGAGTGCTGACTTCATGCCACTGAAGCAGATGACGAAAACTCTCAACAATGATCTGGGCCCCA
ACTGGAGGGACAAGCTCGAGTACTTTGAGGAACGTCCCTTTGCAGCCGCCTCCATTGGGCAGGT
GCACTTGGCCCGCATGAAGGGTGGCCGTGAGGTGGCCATGAAGATTCAGTACCCTGGTGTGGCC
CAGAGCATCAACAGTGACGTCAACAACCTCATGACTGTGCTGAACATGAGCAACATGCTTCCAG
AAGGCCTGTTCCCTGAGCACCTGATCGATGTGCTGAGGCGTGAGCTGGCCTTGGAGTGTGACTA
CCAGCGGGAAGCCGCCTGTGCCAAGAAGTTTAGGGAGCTGCTGAAAGGCCACCCCTTCTTCTAC
GTGCCTGAGATCGTGGATGAGCTCTGCAGCCCCCATGTGCTGACCACAGACCTGGTGTCCGGCT
TCCCTCTGGACCAGGCTGAAGGGCTAAGCCAGGAGGTTCGGAATGAGATCTGCTACAACATACT
GGTCCTGTGTCTGAGGGAGCTGTTCGAGTTCCACTTCATGCAGACCGACCCCAACTGGTCCAAC
TTCTTTTATGACCCTGAGCAGCACAAGGTGGCTCTTCTGGACTTCGGGGCAACACGGGAATATG
ACAGATCCTTCACTGACCTCTATATTCAGATCATTAGGGCTGCTGCTGACAGGGACAGGGAGGC
TGTGAAGCAGAAGTCCATAGAGATGAAGTTTCTCACGGGCTATGAAGTCAAGGCCATGGAAGAT
GCCCATTTGGATGCCATCCTCATCCTAGGAGAGGCCTTTGCCTCTGATGAGCCCTTTGATTTTG
GCACCCAGAGCACCACTGAGAAGATCCACAATCTGATCCCCATCATGCTGAAGCACCGCCTCGT
TCCCCCACCTGAGGAGACCTACTCCCTGCACAGGAAGATGGGTGGCTCCTTCCTCATCTGCTCC
AAGCTGAAGGCCCGGTTCTCTTGCAAAGCCATGTTTGAAGAGGCCTACAGCAACTACTGCAGGA
GGCAGGCCGAGCAGCAGTAGCCAGCTGCTCTGTCATCAGCAGGTGGCCAGCAGATGTGGCTGTG
CTGGTGCTCTGCTCGCTCCTCTGCCTGGAGGGAGGGAGTGGGGTGGGTTCTGAGTGGGAGAGGA
GGGTGGAGAGCCCACAGTGCTCTAGTGGTTTCCACTGCTGGAGGAGTGGAGGAGAAGTCCAGGA
AGGAAAATGAGACCCCACTATTCCATCAGAACCTGCCTGTTATATATTCAGCCCCTGAAATAAC
TAGGAAAAAAGGCAGTTTTATTTTTTCCCCTTTTTCTAAAGTGAATGTTAACCAGAAAAGAGGG
GGTTCTTACTTCCTTCAAATCCCTGCCACTTGAAACAAAATGAAAAATGGAAGCAGAGAAGCAC
TTTTGGATTTTGTGTGTGTTTCTAGATGAGATTTGTGTTTCTGCTGTTTTTGACTCCAGCCTGT
GGTCTGGAGCTGGGAGAAATGCCACTCCGAACAGTGCCGGTGACTGTAGCCATGTCACCTGGGC
CTGCTCTGGTTGGGACATCTGAATGTTTCCAGAGAACTGCTGCCACAAGGGGAGAGCCAGGAGC
AGCAGAGGGAGAGAGGCCTGCTGTACCCACTAGGGCCTGAGAGGAGATGCACTGCTGCCACCCA
CACACCAAAAGGGTCAGCAGTCAGCATAGGCTGGTTTTTTTTTGTACAAATCTTGTTATCAAAT
TTCAGTTCAATTAAAAAGAAGTGCTTGTGAAAAGTC

hide sequence

RefSeq Acc Id:

XM_005326549 ⟹ XP_005326606

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	51,063,067 - 51,098,789 (-)	NCBI
SpeTri2.0	NW_004936526	3,648,495 - 3,684,230 (+)	NCBI

Sequence:

show sequence

CCCCGAGCGCGTGTTAGGCGCCCGCGTTGGCACGTACGGAGCGGCGCGAAGGTGACCGAGATCT
CAGCTTAGTGCCTCCGGGTAAGGCTGCCACCCGCGGGCCTACAGCGTGCTCGGGCGCCTTCCGG
CTGCGGCAAGTGCTGGCCTCACCACCTGTCCAGGCCATTCTTGCAGCCTCAGGTCCCCTCCTAC
CGTGTGTCTGGGAACTCTAACTGCTTGTGCTGCAGCCCTGAAGGACGGCTGCCATGTTGGGGGA
TGCCATAATGGTGGCCAAAGGCCTTGCCAAGCTGACCCAGGCGGCCATGGAAACCCACCTGCAG
CACTTGGGCCTTGGTGGGGAGCTCATCATGGCCGCCAGAGCTCTGCAGTCCACAGCTGTGGAGC
AGATTGGCACGGTCTTGGGGAAGGTACAGGGTCGGGATATGTATGGAGAGACTGAGGCCACTGA
GAGCTTTGACGACCTGGAAGCAGAGGTCCACTTCTCAGGGACACAGGCGTCTGGATCTTCTGCA
GACTTCTCTGTCACCTCCTCTCTTGACCAGTCACTGTCTCCTCCTCTGGGTCACGCCCACAGCG
AGGGCCCAGCTCCTGCCTATGTTGCCAGTGGACCCTTTAGGGAAACTGGGCTCCCGGACCAGGG
AGCCTCCCCTCTGGGCAGAGTTAACGGGAAGCTCTTTGCAGAACCCAGAGACTTATTCTCTGCT
CCCGGCTTCCAGCGAAGGTTCTTCCACCAGGACCAGTCCCCACTGGGGGGCCTCACGGCTGAGG
ACATTGAGAAGGCTCGGCAGGCCAAGGGTCGCCCTGAGAGCAAACCACACAAGCAGATGCTCAG
TGAGCGGGCTCGGGAGCGGAAGGTGCCAGTTACACGAATTGGGCGGCTGGCCAACTTTGGAGGT
CTGGCCGTGGGCCTGGGCTTTGGGGCACTGGCGGAGGTTGCCAAGAAGAGTCTGCGCCCTGAGA
CCACAGGGAAGAAAGCTGTGCTGGATTCCAGCCCCTTCCTGTCAGAAGCGAATGCAGAGCGCAT
TGTGAGCACGCTGTGCAAGGTGCGTGGGGCAGCGCTGAAGCTGGGCCAGATGCTGAGCATCCAG
GACGACGCCTTCATCAACCCCCATCTGGCCAGGATCTTCGAGCGGGTGCGGCAGAGTGCTGACT
TCATGCCACTGAAGCAGATGACGAAAACTCTCAACAATGATCTGGGCCCCAACTGGAGGGACAA
GCTCGAGTACTTTGAGGAACGTCCCTTTGCAGCCGCCTCCATTGGGCAGGTGCACTTGGCCCGC
ATGAAGGGTGGCCGTGAGGTGGCCATGAAGATTCAGTACCCTGGTGTGGCCCAGAGCATCAACA
GTGACGTCAACAACCTCATGACTGTGCTGAACATGAGCAACATGCTTCCAGAAGGCCTGTTCCC
TGAGCACCTGATCGATGTGCTGAGGCGTGAGCTGGCCTTGGAGTGTGACTACCAGCGGGAAGCC
GCCTGTGCCAAGAAGTTTAGGGAGCTGCTGAAAGGCCACCCCTTCTTCTACGTGCCTGAGATCG
TGGATGAGCTCTGCAGCCCCCATGTGCTGACCACAGACCTGGTGTCCGGCTTCCCTCTGGACCA
GGCTGAAGGGCTAAGCCAGGAGGTTCGGAATGAGATCTGCTACAACATACTGGTCCTGTGTCTG
AGGGAGCTGTTCGAGTTCCACTTCATGCAGACCGACCCCAACTGGTCCAACTTCTTTTATGACC
CTGAGCAGCACAAGGTGGCTCTTCTGGACTTCGGGGCAACACGGGAATATGACAGATCCTTCAC
TGACCTCTATATTCAGATCATTAGGGCTGCTGCTGACAGGGACAGGGAGGCTGTGAAGCAGAAG
TCCATAGAGATGAAGTTTCTCACGGGCTATGAAGTCAAGGCCATGGAAGATGCCCATTTGGATG
CCATCCTCATCCTAGGAGAGGCCTTTGCCTCTGATGAGCCCTTTGATTTTGGCACCCAGAGCAC
CACTGAGAAGATCCACAATCTGATCCCCATCATGCTGAAGCACCGCCTCGTTCCCCCACCTGAG
GAGACCTACTCCCTGCACAGGAAGATGGGTGGCTCCTTCCTCATCTGCTCCAAGCTGAAGGCCC
GGTTCTCTTGCAAAGCCATGTTTGAAGAGGCCTACAGCAACTACTGCAGGAGGCAGGCCGAGCA
GCAGTAGCCAGCTGCTCTGTCATCAGCAGGTGGCCAGCAGATGTGGCTGTGCTGGTGCTCTGCT
CGCTCCTCTGCCTGGAGGGAGGGAGTGGGGTGGGTTCTGAGTGGGAGAGGAGGGTGGAGAGCCC
ACAGTGCTCTAGTGGTTTCCACTGCTGGAGGAGTGGAGGAGAAGTCCAGGAAGGAAAATGAGAC
CCCACTATTCCATCAGAACCTGCCTGTTATATATTCAGCCCCTGAAATAACTAGGAAAAAAGGC
AGTTTTATTTTTTCCCCTTTTTCTAAAGTGAATGTTAACCAGAAAAGAGGGGGTTCTTACTTCC
TTCAAATCCCTGCCACTTGAAACAAAATGAAAAATGGAAGCAGAGAAGCACTTTTGGATTTTGT
GTGTGTTTCTAGATGAGATTTGTGTTTCTGCTGTTTTTGACTCCAGCCTGTGGTCTGGAGCTGG
GAGAAATGCCACTCCGAACAGTGCCGGTGACTGTAGCCATGTCACCTGGGCCTGCTCTGGTTGG
GACATCTGAATGTTTCCAGAGAACTGCTGCCACAAGGGGAGAGCCAGGAGCAGCAGAGGGAGAG
AGGCCTGCTGTACCCACTAGGGCCTGAGAGGAGATGCACTGCTGCCACCCACACACCAAAAGGG
TCAGCAGTCAGCATAGGCTGGTTTTTTTTTGTACAAATCTTGTTATCAAATTTCAGTTCAATTA
AAAAGAAGTGCTTGTGAAAAGTC

hide sequence

RefSeq Acc Id:

XM_013359201 ⟹ XP_013214655

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	51,063,067 - 51,098,871 (-)	NCBI
SpeTri2.0	NW_004936526	3,648,469 - 3,684,230 (+)	NCBI

Sequence:

show sequence

GGGCGCCAGCGAGTATGGTAAACAGACCCCGAGCGCGTGTTAGGCGCCCGCGTTGGCACGTACG
GAGCGGCGCGAAGGTGACCGAGATCTCAGCTTAGTGCCTCCGGGTCCCCTCCTACCGTGTGTCT
GGGAACTCTAACTGCTTGTGCTGCAGGTTTGTAAGAACTTTGATCTCCTTAAGGGGATCCAGCT
GTTGGGTTTCACAGCCCTGAAGGACGGCTGCCATGTTGGGGGATGCCATAATGGTGGCCAAAGG
CCTTGCCAAGCTGACCCAGGCGGCCATGGAAACCCACCTGCAGCACTTGGGCCTTGGTGGGGAG
CTCATCATGGCCGCCAGAGCTCTGCAGTCCACAGCTGTGGAGCAGATTGGCACGGTCTTGGGGA
AGGTACAGGGTCGGGATATGTATGGAGAGACTGAGGCCACTGAGAGCTTTGACGACCTGGAAGC
AGAGGTCCACTTCTCAGGGACACAGGCGTCTGGATCTTCTGCAGACTTCTCTGTCACCTCCTCT
CTTGACCAGTCACTGTCTCCTCCTCTGGGTCACGCCCACAGCGAGGGCCCAGCTCCTGCCTATG
TTGCCAGTGGACCCTTTAGGGAAACTGGGCTCCCGGACCAGGGAGCCTCCCCTCTGGGCAGAGT
TAACGGGAAGCTCTTTGCAGAACCCAGAGACTTATTCTCTGCTCCCGGCTTCCAGCGAAGGTTC
TTCCACCAGGACCAGTCCCCACTGGGGGGCCTCACGGCTGAGGACATTGAGAAGGCTCGGCAGG
CCAAGGGTCGCCCTGAGAGCAAACCACACAAGCAGATGCTCAGTGAGCGGGCTCGGGAGCGGAA
GGTGCCAGTTACACGAATTGGGCGGCTGGCCAACTTTGGAGGTCTGGCCGTGGGCCTGGGCTTT
GGGGCACTGGCGGAGGTTGCCAAGAAGAGTCTGCGCCCTGAGACCACAGGGAAGAAAGCTGTGC
TGGATTCCAGCCCCTTCCTGTCAGAAGCGAATGCAGAGCGCATTGTGAGCACGCTGTGCAAGGT
GCGTGGGGCAGCGCTGAAGCTGGGCCAGATGCTGAGCATCCAGGACGACGCCTTCATCAACCCC
CATCTGGCCAGGATCTTCGAGCGGGTGCGGCAGAGTGCTGACTTCATGCCACTGAAGCAGATGA
CGAAAACTCTCAACAATGATCTGGGCCCCAACTGGAGGGACAAGCTCGAGTACTTTGAGGAACG
TCCCTTTGCAGCCGCCTCCATTGGGCAGGTGCACTTGGCCCGCATGAAGGGTGGCCGTGAGGTG
GCCATGAAGATTCAGTACCCTGGTGTGGCCCAGAGCATCAACAGTGACGTCAACAACCTCATGA
CTGTGCTGAACATGAGCAACATGCTTCCAGAAGGCCTGTTCCCTGAGCACCTGATCGATGTGCT
GAGGCGTGAGCTGGCCTTGGAGTGTGACTACCAGCGGGAAGCCGCCTGTGCCAAGAAGTTTAGG
GAGCTGCTGAAAGGCCACCCCTTCTTCTACGTGCCTGAGATCGTGGATGAGCTCTGCAGCCCCC
ATGTGCTGACCACAGACCTGGTGTCCGGCTTCCCTCTGGACCAGGCTGAAGGGCTAAGCCAGGA
GGTTCGGAATGAGATCTGCTACAACATACTGGTCCTGTGTCTGAGGGAGCTGTTCGAGTTCCAC
TTCATGCAGACCGACCCCAACTGGTCCAACTTCTTTTATGACCCTGAGCAGCACAAGGTGGCTC
TTCTGGACTTCGGGGCAACACGGGAATATGACAGATCCTTCACTGACCTCTATATTCAGATCAT
TAGGGCTGCTGCTGACAGGGACAGGGAGGCTGTGAAGCAGAAGTCCATAGAGATGAAGTTTCTC
ACGGGCTATGAAGTCAAGGCCATGGAAGATGCCCATTTGGATGCCATCCTCATCCTAGGAGAGG
CCTTTGCCTCTGATGAGCCCTTTGATTTTGGCACCCAGAGCACCACTGAGAAGATCCACAATCT
GATCCCCATCATGCTGAAGCACCGCCTCGTTCCCCCACCTGAGGAGACCTACTCCCTGCACAGG
AAGATGGGTGGCTCCTTCCTCATCTGCTCCAAGCTGAAGGCCCGGTTCTCTTGCAAAGCCATGT
TTGAAGAGGCCTACAGCAACTACTGCAGGAGGCAGGCCGAGCAGCAGTAGCCAGCTGCTCTGTC
ATCAGCAGGTGGCCAGCAGATGTGGCTGTGCTGGTGCTCTGCTCGCTCCTCTGCCTGGAGGGAG
GGAGTGGGGTGGGTTCTGAGTGGGAGAGGAGGGTGGAGAGCCCACAGTGCTCTAGTGGTTTCCA
CTGCTGGAGGAGTGGAGGAGAAGTCCAGGAAGGAAAATGAGACCCCACTATTCCATCAGAACCT
GCCTGTTATATATTCAGCCCCTGAAATAACTAGGAAAAAAGGCAGTTTTATTTTTTCCCCTTTT
TCTAAAGTGAATGTTAACCAGAAAAGAGGGGGTTCTTACTTCCTTCAAATCCCTGCCACTTGAA
ACAAAATGAAAAATGGAAGCAGAGAAGCACTTTTGGATTTTGTGTGTGTTTCTAGATGAGATTT
GTGTTTCTGCTGTTTTTGACTCCAGCCTGTGGTCTGGAGCTGGGAGAAATGCCACTCCGAACAG
TGCCGGTGACTGTAGCCATGTCACCTGGGCCTGCTCTGGTTGGGACATCTGAATGTTTCCAGAG
AACTGCTGCCACAAGGGGAGAGCCAGGAGCAGCAGAGGGAGAGAGGCCTGCTGTACCCACTAGG
GCCTGAGAGGAGATGCACTGCTGCCACCCACACACCAAAAGGGTCAGCAGTCAGCATAGGCTGG
TTTTTTTTTGTACAAATCTTGTTATCAAATTTCAGTTCAATTAAAAAGAAGTGCTTGTGAAAAG
TC

hide sequence

RefSeq Acc Id:

XM_013359202 ⟹ XP_013214656

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	51,063,067 - 51,098,791 (-)	NCBI
SpeTri2.0	NW_004936526	3,648,571 - 3,684,230 (+)	NCBI

Sequence:

show sequence

TCCGGGTAAGGCTGCCACCCGCGGGCCTACAGCGTGCTCGGGCGCCTTCCGGCTGCGGCAAGTG
CTGGCCTCACCACCTGTCCAGGCCATTCTTGCAGCCTCAGGTCCCCTCCTACCGTGTGTCTGGG
AACTCTAACTGCTTGTGCTGCAGGTTTGTAAGAACTTTGATCTCCTTAAGGGGATCCAGCTGTT
GGGTTTCACAGCCCTGAAGGACGGCTGCCATGTTGGGGGATGCCATAATGGTGGCCAAAGGCCT
TGCCAAGCTGACCCAGGCGGCCATGGAAACCCACCTGCAGCACTTGGGCCTTGGTGGGGAGCTC
ATCATGGCCGCCAGAGCTCTGCAGTCCACAGCTGTGGAGCAGATTGGCACGGTCTTGGGGAAGG
TACAGGGTCGGGATATGTATGGAGAGACTGAGGCCACTGAGAGCTTTGACGACCTGGAAGCAGA
GGTCCACTTCTCAGGGACACAGGCGTCTGGATCTTCTGCAGACTTCTCTGTCACCTCCTCTCTT
GACCAGTCACTGTCTCCTCCTCTGGGTCACGCCCACAGCGAGGGCCCAGCTCCTGCCTATGTTG
CCAGTGGACCCTTTAGGGAAACTGGGCTCCCGGACCAGGGAGCCTCCCCTCTGGGCAGAGTTAA
CGGGAAGCTCTTTGCAGAACCCAGAGACTTATTCTCTGCTCCCGGCTTCCAGCGAAGGTTCTTC
CACCAGGACCAGTCCCCACTGGGGGGCCTCACGGCTGAGGACATTGAGAAGGCTCGGCAGGCCA
AGGGTCGCCCTGAGAGCAAACCACACAAGCAGATGCTCAGTGAGCGGGCTCGGGAGCGGAAGGT
GCCAGTTACACGAATTGGGCGGCTGGCCAACTTTGGAGGTCTGGCCGTGGGCCTGGGCTTTGGG
GCACTGGCGGAGGTTGCCAAGAAGAGTCTGCGCCCTGAGACCACAGGGAAGAAAGCTGTGCTGG
ATTCCAGCCCCTTCCTGTCAGAAGCGAATGCAGAGCGCATTGTGAGCACGCTGTGCAAGGTGCG
TGGGGCAGCGCTGAAGCTGGGCCAGATGCTGAGCATCCAGGACGACGCCTTCATCAACCCCCAT
CTGGCCAGGATCTTCGAGCGGGTGCGGCAGAGTGCTGACTTCATGCCACTGAAGCAGATGACGA
AAACTCTCAACAATGATCTGGGCCCCAACTGGAGGGACAAGCTCGAGTACTTTGAGGAACGTCC
CTTTGCAGCCGCCTCCATTGGGCAGGTGCACTTGGCCCGCATGAAGGGTGGCCGTGAGGTGGCC
ATGAAGATTCAGTACCCTGGTGTGGCCCAGAGCATCAACAGTGACGTCAACAACCTCATGACTG
TGCTGAACATGAGCAACATGCTTCCAGAAGGCCTGTTCCCTGAGCACCTGATCGATGTGCTGAG
GCGTGAGCTGGCCTTGGAGTGTGACTACCAGCGGGAAGCCGCCTGTGCCAAGAAGTTTAGGGAG
CTGCTGAAAGGCCACCCCTTCTTCTACGTGCCTGAGATCGTGGATGAGCTCTGCAGCCCCCATG
TGCTGACCACAGACCTGGTGTCCGGCTTCCCTCTGGACCAGGCTGAAGGGCTAAGCCAGGAGGT
TCGGAATGAGATCTGCTACAACATACTGGTCCTGTGTCTGAGGGAGCTGTTCGAGTTCCACTTC
ATGCAGACCGACCCCAACTGGTCCAACTTCTTTTATGACCCTGAGCAGCACAAGGTGGCTCTTC
TGGACTTCGGGGCAACACGGGAATATGACAGATCCTTCACTGACCTCTATATTCAGATCATTAG
GGCTGCTGCTGACAGGGACAGGGAGGCTGTGAAGCAGAAGTCCATAGAGATGAAGTTTCTCACG
GGCTATGAAGTCAAGGCCATGGAAGATGCCCATTTGGATGCCATCCTCATCCTAGGAGAGGCCT
TTGCCTCTGATGAGCCCTTTGATTTTGGCACCCAGAGCACCACTGAGAAGATCCACAATCTGAT
CCCCATCATGCTGAAGCACCGCCTCGTTCCCCCACCTGAGGAGACCTACTCCCTGCACAGGAAG
ATGGGTGGCTCCTTCCTCATCTGCTCCAAGCTGAAGGCCCGGTTCTCTTGCAAAGCCATGTTTG
AAGAGGCCTACAGCAACTACTGCAGGAGGCAGGCCGAGCAGCAGTAGCCAGCTGCTCTGTCATC
AGCAGGTGGCCAGCAGATGTGGCTGTGCTGGTGCTCTGCTCGCTCCTCTGCCTGGAGGGAGGGA
GTGGGGTGGGTTCTGAGTGGGAGAGGAGGGTGGAGAGCCCACAGTGCTCTAGTGGTTTCCACTG
CTGGAGGAGTGGAGGAGAAGTCCAGGAAGGAAAATGAGACCCCACTATTCCATCAGAACCTGCC
TGTTATATATTCAGCCCCTGAAATAACTAGGAAAAAAGGCAGTTTTATTTTTTCCCCTTTTTCT
AAAGTGAATGTTAACCAGAAAAGAGGGGGTTCTTACTTCCTTCAAATCCCTGCCACTTGAAACA
AAATGAAAAATGGAAGCAGAGAAGCACTTTTGGATTTTGTGTGTGTTTCTAGATGAGATTTGTG
TTTCTGCTGTTTTTGACTCCAGCCTGTGGTCTGGAGCTGGGAGAAATGCCACTCCGAACAGTGC
CGGTGACTGTAGCCATGTCACCTGGGCCTGCTCTGGTTGGGACATCTGAATGTTTCCAGAGAAC
TGCTGCCACAAGGGGAGAGCCAGGAGCAGCAGAGGGAGAGAGGCCTGCTGTACCCACTAGGGCC
TGAGAGGAGATGCACTGCTGCCACCCACACACCAAAAGGGTCAGCAGTCAGCATAGGCTGGTTT
TTTTTTGTACAAATCTTGTTATCAAATTTCAGTTCAATTAAAAAGAAGTGCTTGTGAAAAGTC

hide sequence

RefSeq Acc Id:

XM_040276923 ⟹ XP_040132857

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	51,063,067 - 51,098,688 (-)	NCBI

RefSeq Acc Id:

XM_040276924 ⟹ XP_040132858

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	51,063,067 - 51,098,845 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005326605	(Get FASTA)	NCBI Sequence Viewer
	XP_005326606	(Get FASTA)	NCBI Sequence Viewer
	XP_013214655	(Get FASTA)	NCBI Sequence Viewer
	XP_013214656	(Get FASTA)	NCBI Sequence Viewer
	XP_040132857	(Get FASTA)	NCBI Sequence Viewer
	XP_040132858	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000013800.3
GenBank Protein	KAG3257985	(Get FASTA)	NCBI Sequence Viewer
	KAG3257986	(Get FASTA)	NCBI Sequence Viewer
	KAG3257987	(Get FASTA)	NCBI Sequence Viewer
	KAG3257988	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005326605 ⟸ XM_005326548

- UniProtKB:

I3MPP6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLGDAIMVAKGLAKLTQAAMETHLQHLGLGGELIMAARALQSTAVEQIGTVLGKVQGRDMYGET
EATESFDDLEAEVHFSGTQASGSSADFSVTSSLDQSLSPPLGHAHSEGPAPAYVASGPFRETGL
PDQGASPLGRVNGKLFAEPRDLFSAPGFQRRFFHQDQSPLGGLTAEDIEKARQAKGRPESKPHK
QMLSERARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKSLRPETTGKKAVLDSSPFLSEAN
AERIVSTLCKVRGAALKLGQMLSIQDDAFINPHLARIFERVRQSADFMPLKQMTKTLNNDLGPN
WRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNLMTVLNMSNMLPE
GLFPEHLIDVLRRELALECDYQREAACAKKFRELLKGHPFFYVPEIVDELCSPHVLTTDLVSGF
PLDQAEGLSQEVRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPEQHKVALLDFGATREYD
RSFTDLYIQIIRAAADRDREAVKQKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASDEPFDFG
TQSTTEKIHNLIPIMLKHRLVPPPEETYSLHRKMGGSFLICSKLKARFSCKAMFEEAYSNYCRR
QAEQQ

hide sequence

RefSeq Acc Id:

XP_013214655 ⟸ XM_013359201

- UniProtKB:

I3MPP6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLGDAIMVAKGLAKLTQAAMETHLQHLGLGGELIMAARALQSTAVEQIGTVLGKVQGRDMYGET
EATESFDDLEAEVHFSGTQASGSSADFSVTSSLDQSLSPPLGHAHSEGPAPAYVASGPFRETGL
PDQGASPLGRVNGKLFAEPRDLFSAPGFQRRFFHQDQSPLGGLTAEDIEKARQAKGRPESKPHK
QMLSERARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKSLRPETTGKKAVLDSSPFLSEAN
AERIVSTLCKVRGAALKLGQMLSIQDDAFINPHLARIFERVRQSADFMPLKQMTKTLNNDLGPN
WRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNLMTVLNMSNMLPE
GLFPEHLIDVLRRELALECDYQREAACAKKFRELLKGHPFFYVPEIVDELCSPHVLTTDLVSGF
PLDQAEGLSQEVRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPEQHKVALLDFGATREYD
RSFTDLYIQIIRAAADRDREAVKQKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASDEPFDFG
TQSTTEKIHNLIPIMLKHRLVPPPEETYSLHRKMGGSFLICSKLKARFSCKAMFEEAYSNYCRR
QAEQQ

hide sequence

RefSeq Acc Id:

XP_005326606 ⟸ XM_005326549

- UniProtKB:

I3MPP6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLGDAIMVAKGLAKLTQAAMETHLQHLGLGGELIMAARALQSTAVEQIGTVLGKVQGRDMYGET
EATESFDDLEAEVHFSGTQASGSSADFSVTSSLDQSLSPPLGHAHSEGPAPAYVASGPFRETGL
PDQGASPLGRVNGKLFAEPRDLFSAPGFQRRFFHQDQSPLGGLTAEDIEKARQAKGRPESKPHK
QMLSERARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKSLRPETTGKKAVLDSSPFLSEAN
AERIVSTLCKVRGAALKLGQMLSIQDDAFINPHLARIFERVRQSADFMPLKQMTKTLNNDLGPN
WRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNLMTVLNMSNMLPE
GLFPEHLIDVLRRELALECDYQREAACAKKFRELLKGHPFFYVPEIVDELCSPHVLTTDLVSGF
PLDQAEGLSQEVRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPEQHKVALLDFGATREYD
RSFTDLYIQIIRAAADRDREAVKQKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASDEPFDFG
TQSTTEKIHNLIPIMLKHRLVPPPEETYSLHRKMGGSFLICSKLKARFSCKAMFEEAYSNYCRR
QAEQQ

hide sequence

RefSeq Acc Id:

XP_013214656 ⟸ XM_013359202

- UniProtKB:

I3MPP6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLGDAIMVAKGLAKLTQAAMETHLQHLGLGGELIMAARALQSTAVEQIGTVLGKVQGRDMYGET
EATESFDDLEAEVHFSGTQASGSSADFSVTSSLDQSLSPPLGHAHSEGPAPAYVASGPFRETGL
PDQGASPLGRVNGKLFAEPRDLFSAPGFQRRFFHQDQSPLGGLTAEDIEKARQAKGRPESKPHK
QMLSERARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKSLRPETTGKKAVLDSSPFLSEAN
AERIVSTLCKVRGAALKLGQMLSIQDDAFINPHLARIFERVRQSADFMPLKQMTKTLNNDLGPN
WRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNLMTVLNMSNMLPE
GLFPEHLIDVLRRELALECDYQREAACAKKFRELLKGHPFFYVPEIVDELCSPHVLTTDLVSGF
PLDQAEGLSQEVRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPEQHKVALLDFGATREYD
RSFTDLYIQIIRAAADRDREAVKQKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASDEPFDFG
TQSTTEKIHNLIPIMLKHRLVPPPEETYSLHRKMGGSFLICSKLKARFSCKAMFEEAYSNYCRR
QAEQQ

hide sequence

RefSeq Acc Id:	XP_040132858 ⟸ XM_040276924
- UniProtKB:	I3MPP6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040132857 ⟸ XM_040276923
- UniProtKB:	I3MPP6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000013800 ⟸ ENSSTOT00000015410

Protein Domains

ABC1 atypical kinase-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000015395	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000015410.3	UniProtKB/TrEMBL
InterPro	ADCK3_UbiB	UniProtKB/TrEMBL
	Atypical_kinase_ADCK	UniProtKB/TrEMBL
	Kinase-like_dom_sf	UniProtKB/TrEMBL
	UbiB_dom	UniProtKB/TrEMBL
NCBI Gene	Coq8a	ENTREZGENE
PANTHER	PTHR43851	UniProtKB/TrEMBL
	PTHR43851:SF1	UniProtKB/TrEMBL
Pfam	ABC1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF56112	UniProtKB/TrEMBL
UniProt	I3MPP6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM