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Gene: Emg1 (EMG1 N1-specific pseudouridine methyltransferase) Rattus norvegicus
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Symbol: Emg1
Name: EMG1 N1-specific pseudouridine methyltransferase
Description: Predicted to have rRNA (pseudouridine) methyltransferase activity and rRNA binding activity. Predicted to be involved in blastocyst development; nucleologenesis; and rRNA base methylation. Predicted to localize to the nucleolus; nucleoplasm; and small-subunit processome. Human ortholog(s) of this gene implicated in Bowen-Conradi syndrome. Orthologous to human EMG1 (EMG1 N1-specific pseudouridine methyltransferase); PARTICIPATES IN ribosome biogenesis pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: EMG1 nucleolar protein homolog; EMG1 nucleolar protein homolog (S. cerevisiae); gene rich cluster, C2f; gene rich cluster, C2f gene; Grcc2f; LOC312706; probable ribosome biogenesis protein NEP1; ribosomal RNA small subunit methyltransferase NEP1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04157,222,366 - 157,230,647 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4157,222,385 - 157,230,647 (-)Ensembl
Rnor_5.04224,239,962 - 224,248,243 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44160,826,925 - 160,835,206 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14161,072,842 - 161,080,012 (-)NCBI
Celera4146,247,921 - 146,256,202 (-)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Emg1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307665
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.