Pigp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 11 | 47,152,601 - 47,158,766 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 33,682,943 - 33,689,111 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 33,682,948 - 33,689,321 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 11 | 42,337,970 - 42,344,129 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 35,009,338 - 35,015,497 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 34,157,517 - 34,163,682 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 34,592,128 - 34,598,253 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 34,592,121 - 34,598,275 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 38,179,876 - 38,186,002 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 34,610,876 - 34,617,001 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 11 | 34,666,936 - 34,672,737 (-) | NCBI | | | | | Celera | 11 | 34,760,717 - 34,766,841 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q11 | NCBI | | | | |
|
PIGP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 21 | 37,065,364 - 37,073,071 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 21 | 37,062,846 - 37,073,170 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 21 | 38,437,664 - 38,445,371 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 21 | 37,359,534 - 37,367,328 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 21 | 37,359,546 - 37,367,264 | NCBI | | | | | Celera | 21 | 23,636,029 - 23,643,823 (-) | NCBI | | Celera | | | Cytogenetic Map | 21 | q22.13 | NCBI | | | | | HuRef | 21 | 23,913,288 - 23,921,071 (-) | NCBI | | HuRef | | | CHM1_1 | 21 | 37,999,410 - 38,007,205 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 21 | 35,447,555 - 35,455,253 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Pigp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 16 | 94,159,622 - 94,171,874 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 94,159,622 - 94,172,701 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 94,358,763 - 94,371,015 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 94,358,763 - 94,371,842 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 94,580,370 - 94,592,622 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 94,473,245 - 94,479,813 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 95,445,967 - 95,458,206 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | C4 | NCBI | | | | | cM Map | 16 | 55.18 | NCBI | | | | |
|
Pigp (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955407 | 36,178,323 - 36,185,317 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
PIGP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 22 | 33,176,303 - 33,185,563 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 21 | 28,036,496 - 28,045,755 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 21 | 23,427,190 - 23,435,170 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 21 | 36,781,890 - 36,789,844 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 21 | 36,781,890 - 36,789,748 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
PIGP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 31 | 32,222,284 - 32,230,633 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 31 | 32,220,152 - 32,230,656 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 31 | 31,282,953 - 31,292,422 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 31 | 31,524,882 - 31,534,157 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 31 | 31,522,483 - 31,533,793 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 31 | 31,392,816 - 31,402,103 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 31 | 31,405,905 - 31,415,164 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 31 | 31,896,193 - 31,905,666 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Pigp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404971 | 31,735,742 - 31,743,676 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936500 | 5,724,202 - 5,731,885 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936500 | 5,724,178 - 5,732,081 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
PIGP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 13 | 200,686,666 - 200,695,320 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 200,686,716 - 200,695,537 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 210,760,413 - 210,769,136 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
PIGP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 2 | 81,026,551 - 81,048,686 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 81,040,993 - 81,048,661 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666054 | 8,859,172 - 8,894,224 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Pigp (Heterocephalus glaber - naked mole-rat) |
|