Mrpl2 (mitochondrial ribosomal protein L2) - Rat Genome Database

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Gene: Mrpl2 (mitochondrial ribosomal protein L2) Rattus norvegicus
Analyze
Symbol: Mrpl2
Name: mitochondrial ribosomal protein L2
RGD ID: 1307147
Description: Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be located in mitochondrion and nucleoplasm. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL2 (mitochondrial ribosomal protein L2); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 39S ribosomal protein L2, mitochondrial; L2mt; large ribosomal subunit protein uL2m; LOC301240; MGC112706; MRP-L2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8921,830,834 - 21,834,607 (-)NCBIGRCr8
mRatBN7.2914,333,233 - 14,337,006 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl914,333,234 - 14,337,040 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx922,917,097 - 22,920,866 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0927,979,914 - 27,983,679 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0926,280,472 - 26,284,241 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0916,643,621 - 16,647,394 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl916,643,619 - 16,647,458 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0915,550,236 - 15,554,009 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4910,016,260 - 10,020,033 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1910,013,556 - 10,017,354 (+)NCBI
Celera912,081,087 - 12,084,860 (-)NCBICelera
Cytogenetic Map9q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl2Ratinfantile Refsum disease  ISORGD:13161688554872ClinVar Annotator: match by term: ADRENOLEUKODYSTROPHY, AUTOSOMAL NEONATALClinVarPMID:19877282|PMID:21031596|PMID:28492532|PMID:8670792
Mrpl2RatZellweger syndrome  ISORGD:13161688554872ClinVar Annotator: match by term: Peroxisome biogenesis disorders, Zellweger syndrome spectrumClinVarPMID:19877282|PMID:21031596|PMID:28492532|PMID:8670792

1 to 20 of 65 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl2Rat(+)-schisandrin B multiple interactionsEXP 6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of MRPL2 mRNA]CTDPMID:31150632
Mrpl2Rat1,2-dimethylhydrazine multiple interactionsISORGD:13161696480464[1,2-Dimethylhydrazine co-treated with Folic Acid] results in increased expression of MRPL2 mRNACTDPMID:22206623
Mrpl2Rat1,2-dimethylhydrazine increases expressionISORGD:131616964804641,2-Dimethylhydrazine results in increased expression of MRPL2 mRNACTDPMID:22206623
Mrpl2Rat17alpha-ethynylestradiol increases expressionISORGD:13161696480464Ethinyl Estradiol results in increased expression of MRPL2 mRNACTDPMID:17942748
Mrpl2Rat17alpha-ethynylestradiol affects expressionISORGD:13161696480464Ethinyl Estradiol affects the expression of MRPL2 mRNACTDPMID:17555576
Mrpl2Rat17alpha-ethynylestradiol multiple interactionsISORGD:13161696480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of MRPL2 mRNACTDPMID:17942748
Mrpl2Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISORGD:13161696480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of MRPL2 mRNACTDPMID:17942748
Mrpl2Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of MRPL2 mRNACTDPMID:33387578
Mrpl2Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:13161696480464Tetrachlorodibenzodioxin affects the expression of MRPL2 mRNACTDPMID:21570461
Mrpl2Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of MRPL2 mRNACTDPMID:21215274
Mrpl2Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISORGD:13161696480464Tetrachlorodibenzodioxin results in decreased expression of MRPL2 mRNACTDPMID:21354282
Mrpl2Rat4,4'-sulfonyldiphenol multiple interactionsEXP 6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of more ...CTDPMID:36041667
Mrpl2Rat5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole affects expressionEXP 6480464Omeprazole affects the expression of MRPL2 mRNACTDPMID:19483382
Mrpl2Rat6-propyl-2-thiouracil affects expressionEXP 6480464Propylthiouracil affects the expression of MRPL2 mRNACTDPMID:19483382
Mrpl2Ratacrylamide decreases expressionISORGD:13161686480464Acrylamide results in decreased expression of MRPL2 mRNACTDPMID:32763439
Mrpl2Ratamiodarone affects expressionEXP 6480464Amiodarone affects the expression of MRPL2 mRNACTDPMID:19483382
Mrpl2Rataristolochic acid A increases expressionISORGD:13161686480464aristolochic acid I results in increased expression of MRPL2 mRNACTDPMID:33212167
Mrpl2Ratarsane multiple interactionsISORGD:13161686480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...CTDPMID:39836092
Mrpl2Ratarsenic atom multiple interactionsISORGD:13161686480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...CTDPMID:39836092
Mrpl2Ratarsenite(3-) multiple interactionsISORGD:13161686480464arsenite promotes the reaction [G3BP1 protein binds to MRPL2 mRNA]CTDPMID:32406909

1 to 20 of 65 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl2Ratmitochondrial translation involved_inIBAPANTHER:PTN008550512|SGD:S0000007761600115GO_REF:0000033GO_CentralGO_REF:0000033
Mrpl2Rattranslation involved_inIEAInterPro:IPR002171|InterPro:IPR022666|InterPro:IPR0226691600115GO_REF:0000002InterProGO_REF:0000002

Cellular Component
1 to 13 of 13 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl2Ratmitochondrial large ribosomal subunit part_ofISSUniProtKB:Q5T6531600115GO_REF:0000024UniProtGO_REF:0000024
Mrpl2Ratmitochondrial large ribosomal subunit part_ofIEAUniProtKB:Q5T653|ensembl:ENSP000003734041600115GO_REF:0000107EnsemblGO_REF:0000107
Mrpl2Ratmitochondrial large ribosomal subunit part_ofIBAPANTHER:PTN008550512|SGD:S000000776|UniProtKB:Q57Z57|UniProtKB:Q5T6531600115GO_REF:0000033GO_CentralGO_REF:0000033
Mrpl2Ratmitochondrial large ribosomal subunit part_ofISORGD:13161681624291 PMID:25278503, PMID:28892042RGDPMID:25278503|PMID:28892042
Mrpl2Ratmitochondrion located_inIEAUniProtKB:Q5T653|ensembl:ENSP000003734041600115GO_REF:0000107EnsemblGO_REF:0000107
Mrpl2Ratmitochondrion located_inIEAUniProtKB-KW:KW-04961600115GO_REF:0000043UniProtGO_REF:0000043
Mrpl2Ratmitochondrion located_inISORGD:13161681624291 PMID:28892042RGDGO_REF:0000052|PMID:28892042
Mrpl2Ratmitochondrion located_inIEAUniProtKB-SubCell:SL-01731600115GO_REF:0000044UniProtGO_REF:0000044
Mrpl2Ratnucleoplasm located_inIEAUniProtKB:Q5T653|ensembl:ENSP000003734041600115GO_REF:0000107EnsemblGO_REF:0000107
Mrpl2Ratnucleoplasm located_inISORGD:13161681624291 RGDGO_REF:0000052
Mrpl2Ratribonucleoprotein complex part_ofIEAUniProtKB-KW:KW-06871600115GO_REF:0000043UniProtGO_REF:0000043
Mrpl2Ratribosome located_inIEAUniProtKB-KW:KW-06891600115GO_REF:0000043UniProtGO_REF:0000043
Mrpl2Ratribosome located_inIEAInterPro:IPR002171|InterPro:IPR022666|InterPro:IPR0226691600115GO_REF:0000002InterProGO_REF:0000002
1 to 13 of 13 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl2RatRNA binding enablesIBAPANTHER:PTN000343556|RGD:619827|TAIR:locus:2060917|TAIR:locus:2122189|TAIR:locus:2828126|TAIR:locus:5049544831600115GO_REF:0000033GO_CentralGO_REF:0000033
Mrpl2Ratstructural constituent of ribosome enablesIBAFB:FBgn0261602|MGI:1350927|PANTHER:PTN000343556|SGD:S000000776|SGD:S000001280|SGD:S000002104|UniProtKB:P60422|UniProtKB:P62917|UniProtKB:Q8I3T91600115GO_REF:0000033GO_CentralGO_REF:0000033
Mrpl2Ratstructural constituent of ribosome enablesIEAInterPro:IPR002171|InterPro:IPR022666|InterPro:IPR0226691600115GO_REF:0000002InterProGO_REF:0000002


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
PMID:18614015   PMID:22658674   PMID:22681889   PMID:25278503   PMID:28892042  



Mrpl2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8921,830,834 - 21,834,607 (-)NCBIGRCr8
mRatBN7.2914,333,233 - 14,337,006 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl914,333,234 - 14,337,040 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx922,917,097 - 22,920,866 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0927,979,914 - 27,983,679 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0926,280,472 - 26,284,241 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0916,643,621 - 16,647,394 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl916,643,619 - 16,647,458 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0915,550,236 - 15,554,009 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4910,016,260 - 10,020,033 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1910,013,556 - 10,017,354 (+)NCBI
Celera912,081,087 - 12,084,860 (-)NCBICelera
Cytogenetic Map9q12NCBI
MRPL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38643,054,029 - 43,059,863 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl643,054,029 - 43,059,438 (-)EnsemblGRCh38hg38GRCh38
GRCh37643,021,767 - 43,027,172 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36643,129,745 - 43,135,220 (-)NCBINCBI36Build 36hg18NCBI36
Build 34643,129,744 - 43,135,220NCBI
Celera644,574,010 - 44,579,485 (-)NCBICelera
Cytogenetic Map6p21.1NCBI
HuRef642,738,760 - 42,744,234 (-)NCBIHuRef
CHM1_1643,024,212 - 43,029,687 (-)NCBICHM1_1
T2T-CHM13v2.0642,883,100 - 42,888,934 (-)NCBIT2T-CHM13v2.0
Mrpl2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391746,957,094 - 46,961,058 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1746,957,155 - 46,961,065 (+)EnsemblGRCm39 Ensembl
GRCm381746,646,172 - 46,650,132 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1746,646,229 - 46,650,139 (+)EnsemblGRCm38mm10GRCm38
MGSCv371746,783,197 - 46,787,081 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361746,109,437 - 46,113,323 (+)NCBIMGSCv36mm8
Celera1750,082,131 - 50,086,015 (+)NCBICelera
Cytogenetic Map17CNCBI
cM Map1722.9NCBI
Mrpl2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554379,017,939 - 9,022,760 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554379,018,491 - 9,022,998 (-)NCBIChiLan1.0ChiLan1.0
MRPL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2557,554,349 - 57,559,934 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1653,424,600 - 53,430,286 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0642,646,495 - 42,651,909 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1643,941,460 - 43,946,407 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl643,941,455 - 43,946,407 (-)Ensemblpanpan1.1panPan2
MRPL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11211,574,775 - 11,578,616 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1211,574,792 - 11,578,557 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1211,601,792 - 11,605,611 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01212,056,139 - 12,059,946 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1212,056,156 - 12,059,905 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11211,584,773 - 11,588,584 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01211,668,837 - 11,672,652 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01211,762,901 - 11,766,728 (-)NCBIUU_Cfam_GSD_1.0
Mrpl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494647,073,993 - 47,090,150 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647616,881,744 - 16,886,301 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647616,881,750 - 16,886,209 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MRPL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl738,116,179 - 38,121,756 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1738,116,172 - 38,121,593 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2743,616,539 - 43,621,036 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MRPL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11729,100,918 - 29,106,394 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1729,101,498 - 29,106,355 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604443,116,583 - 43,121,570 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

.

.
Variants in Mrpl2
12 total Variants


Assembly: Rnor_5.0

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain Variant Page
9 15550296 15550297 C A snv DOB/Oda (KyushuU) View more Information

Predicted Target Of
Summary Value
Count of predictions:35
Count of miRNA genes:34
Interacting mature miRNAs:35
Transcripts:ENSRNOT00000024380
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 18 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9510982650109826Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
7411609Foco16Food consumption QTL 1625.60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9895256053952560Rat
61450Ciaa3CIA Autoantibody QTL 36.5blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)9795472022071169Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9510982642921101Rat
70226Eae4Experimental allergic encephalomyelitis QTL 4nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)9125661317Rat

1 to 10 of 18 rows
RH128497  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8921,831,711 - 21,832,186 (+)Marker Load Pipeline
mRatBN7.2914,334,110 - 14,334,585 (+)MAPPERmRatBN7.2
Rnor_6.0916,644,499 - 16,644,973NCBIRnor6.0
Rnor_5.0915,551,114 - 15,551,588UniSTSRnor5.0
RGSC_v3.4910,018,681 - 10,019,155UniSTSRGSC3.4
Celera912,081,965 - 12,082,439UniSTS
RH 3.4 Map960.4UniSTS
Cytogenetic Map9q12UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000024380   ⟹   ENSRNOP00000024380
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl914,333,234 - 14,337,040 (-)Ensembl
Rnor_6.0 Ensembl916,643,619 - 16,647,458 (-)Ensembl
RefSeq Acc Id: NM_001034136   ⟹   NP_001029308
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8921,830,834 - 21,834,607 (-)NCBI
mRatBN7.2914,333,233 - 14,337,006 (-)NCBI
Rnor_6.0916,643,621 - 16,647,394 (-)NCBI
Rnor_5.0915,550,236 - 15,554,009 (-)NCBI
RGSC_v3.4910,016,260 - 10,020,033 (+)RGD
Celera912,081,087 - 12,084,860 (-)RGD
Sequence:
Protein RefSeqs NP_001029308 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI00082 (Get FASTA)   NCBI Sequence Viewer  
  EDM18833 (Get FASTA)   NCBI Sequence Viewer  
  EDM18834 (Get FASTA)   NCBI Sequence Viewer  
  EDM18835 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000024380
  ENSRNOP00000024380.5
GenBank Protein Q498T4 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001029308   ⟸   NM_001034136
- Peptide Label: precursor
- UniProtKB: Q498T4 (UniProtKB/Swiss-Prot),   A6JIP7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000024380   ⟸   ENSRNOT00000024380
Name Modeler Protein Id AA Range Protein Structure
AF-Q498T4-F1-model_v2 AlphaFold Q498T4 1-304 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13696513
Promoter ID:EPDNEW_R7037
Type:multiple initiation site
Name:Mrpl2_1
Description:mitochondrial ribosomal protein L2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0916,647,430 - 16,647,490EPDNEW


1 to 30 of 30 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-28235 BioCyc
Ensembl Genes ENSRNOG00000018057 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000024380 ENTREZGENE
  ENSRNOT00000024380.8 UniProtKB/Swiss-Prot
Gene3D-CATH 2.30.30.30 UniProtKB/Swiss-Prot
  2.40.50.140 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7325700 IMAGE-MGC_LOAD
InterPro NA-bd_OB-fold UniProtKB/Swiss-Prot
  Rbsml_prot_L2_RNA-bd_dom UniProtKB/Swiss-Prot
  Rib_L2_dom2 UniProtKB/Swiss-Prot
  Ribosomal_L2 UniProtKB/Swiss-Prot
  Ribosomal_L2_C UniProtKB/Swiss-Prot
  Translation_prot_SH3-like_sf UniProtKB/Swiss-Prot
KEGG Report rno:301240 UniProtKB/Swiss-Prot
MGC_CLONE MGC:112706 IMAGE-MGC_LOAD
NCBI Gene 301240 ENTREZGENE
PANTHER LARGE RIBOSOMAL SUBUNIT PROTEIN UL2M UniProtKB/Swiss-Prot
  PTHR13691 UniProtKB/Swiss-Prot
Pfam Ribosomal_L2 UniProtKB/Swiss-Prot
  Ribosomal_L2_C UniProtKB/Swiss-Prot
PhenoGen Mrpl2 PhenoGen
RatGTEx ENSRNOG00000018057 RatGTEx
SMART Ribosomal_L2 UniProtKB/Swiss-Prot
  Ribosomal_L2_C UniProtKB/Swiss-Prot
Superfamily-SCOP SSF50104 UniProtKB/Swiss-Prot
  SSF50249 UniProtKB/Swiss-Prot
UniProt A6JIP7 ENTREZGENE, UniProtKB/TrEMBL
  A6JIP8_RAT UniProtKB/TrEMBL
  A6JIP9_RAT UniProtKB/TrEMBL
  Q498T4 ENTREZGENE, UniProtKB/Swiss-Prot
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Mrpl2  mitochondrial ribosomal protein L2  Mrpl2_predicted  mitochondrial ribosomal protein L2 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Mrpl2_predicted  mitochondrial ribosomal protein L2 (predicted)      Symbol and Name status set to approved 70820 APPROVED