Topors (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 5 | 60,184,076 - 60,195,979 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 55,388,033 - 55,399,937 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 55,387,632 - 55,399,937 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 57,354,241 - 57,365,824 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 59,173,382 - 59,184,966 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 59,145,077 - 59,156,688 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 56,554,956 - 56,566,503 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 56,554,969 - 56,567,320 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 61,098,846 - 61,110,393 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 57,663,121 - 57,676,619 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 57,663,337 - 57,676,660 (-) | NCBI | | | | | Celera | 5 | 54,004,376 - 54,015,952 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q22 | NCBI | | | | |
|
TOPORS (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 9 | 32,540,544 - 32,552,586 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 9 | 32,540,544 - 32,552,586 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 9 | 32,540,542 - 32,552,584 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 32,530,542 - 32,542,601 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 9 | 32,530,542 - 32,542,601 | NCBI | | | | | Celera | 9 | 32,471,749 - 32,483,828 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | p21.1 | NCBI | | | | | HuRef | 9 | 32,496,996 - 32,509,408 (-) | NCBI | | HuRef | | | CHM1_1 | 9 | 32,540,543 - 32,552,661 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 32,556,707 - 32,568,751 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Topors (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 4 | 40,259,606 - 40,269,841 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 40,259,601 - 40,269,850 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 40,259,606 - 40,269,841 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 40,259,601 - 40,269,850 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 40,206,639 - 40,216,874 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 40,443,970 - 40,458,496 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 39,922,611 - 39,932,846 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | A5 | NCBI | | | | | cM Map | 4 | 20.24 | NCBI | | | | |
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Topors (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955472 | 3,073,090 - 3,076,607 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
TOPORS (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 11 | 92,062,236 - 92,074,228 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 9 | 92,068,174 - 92,091,206 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 32,314,850 - 32,327,067 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 33,124,730 - 33,136,923 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 33,124,730 - 33,135,129 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
TOPORS (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 11 | 49,809,156 - 49,821,224 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 11 | 49,809,465 - 49,821,075 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 11 | 48,431,713 - 48,443,289 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 11 | 50,750,269 - 50,761,842 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 11 | 50,750,578 - 50,761,831 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 11 | 49,413,336 - 49,424,903 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 11 | 49,279,886 - 49,291,445 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 11 | 50,038,557 - 50,050,130 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Topors (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 164,671,640 - 164,682,295 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936524 | 1,219,907 - 1,229,723 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936524 | 1,219,101 - 1,229,937 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
TOPORS (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 10 | 33,865,959 - 33,879,070 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 10 | 33,865,967 - 33,878,135 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 10 | 38,119,298 - 38,131,555 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
TOPORS (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 12 | 47,702,638 - 47,714,309 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 47,702,995 - 47,714,338 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 44,594,963 - 44,606,860 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Topors (Heterocephalus glaber - naked mole-rat) |
|