Ro60 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 13 | 58,049,838 - 58,070,828 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 13 | 55,499,514 - 55,520,504 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 13 | 55,499,534 - 55,520,504 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 13 | 58,067,723 - 58,089,035 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 13 | 59,335,175 - 59,356,177 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 13 | 56,620,315 - 56,641,564 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 13 | 60,546,892 - 60,567,882 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 13 | 60,546,912 - 60,567,882 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 13 | 65,535,453 - 65,556,443 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 13 | 57,584,656 - 57,605,648 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 13 | 57,600,708 - 57,614,506 (-) | NCBI | | | | | Celera | 13 | 55,587,205 - 55,608,219 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | q21 | NCBI | | | | |
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RO60 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 1 | 193,059,612 - 193,091,777 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 193,059,454 - 193,091,777 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 193,028,742 - 193,060,907 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 191,295,376 - 191,327,530 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 189,760,820 - 189,786,771 | NCBI | | | | | Celera | 1 | 166,138,163 - 166,170,512 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q31.2 | NCBI | | | | | HuRef | 1 | 164,264,353 - 164,296,702 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 194,450,271 - 194,482,819 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 192,406,634 - 192,438,985 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Ro60 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 1 | 143,626,528 - 143,652,794 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 143,626,528 - 143,652,806 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 143,750,790 - 143,777,063 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 143,750,790 - 143,777,068 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 145,597,920 - 145,624,181 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 145,517,790 - 145,539,196 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 146,325,813 - 146,352,080 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | F | NCBI | | | | | cM Map | 1 | 62.54 | NCBI | | | | |
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Ro60 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955406 | 30,468,775 - 30,491,206 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955406 | 30,468,775 - 30,491,206 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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RO60 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 1 | 56,701,008 - 56,733,264 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 56,370,687 - 56,397,192 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 168,518,796 - 168,551,137 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 172,811,822 - 172,844,152 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 172,811,822 - 172,838,373 (+) | Ensembl | panpan1.1 | | panPan2 | |
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RO60 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 38 | 5,975,824 - 6,004,327 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 38 | 5,975,935 - 5,997,945 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 38 | 6,072,834 - 6,101,961 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 38 | 5,992,433 - 6,021,602 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 38 | 5,992,542 - 6,021,612 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 38 | 5,991,803 - 6,020,913 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 38 | 6,357,378 - 6,386,491 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 38 | 6,586,152 - 6,615,302 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ro60 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024409344 | 80,822,410 - 80,855,492 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936638 | 1,304,048 - 1,317,948 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936638 | 1,289,452 - 1,320,522 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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RO60 (Sus scrofa - pig) |
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RO60 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 25 | 36,339,236 - 36,364,066 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 25 | 36,340,487 - 36,363,637 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666055 | 37,288,148 - 37,312,426 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ro60 (Heterocephalus glaber - naked mole-rat) |
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