Symbol:
Etfa
Name:
electron transfer flavoprotein subunit alpha
RGD ID:
12654914
Description:
ENCODES a protein that exhibits electron transfer activity (inferred); flavin adenine dinucleotide binding (inferred); oxidoreductase activity (inferred); INVOLVED IN amino acid catabolic process (inferred); fatty acid beta-oxidation using acyl-CoA dehydrogenase (inferred); respiratory electron transport chain (inferred); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); genetic disease (ortholog); FOUND IN electron transfer flavoprotein complex (inferred); mitochondrial matrix (inferred); mitochondrion (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
electron transfer flavoprotein alpha subunit; electron transfer flavoprotein subunit alpha, mitochondrial
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024408640 118,020,782 - 118,094,606 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936471 35,868,757 - 35,943,139 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936471 35,868,851 - 35,942,662 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Etfa Squirrel Bloom syndrome ISO RGD:1342675 8554872 ClinVar Annotator: match by term: Bloom syndrome ClinVar PMID:28492532 Etfa Squirrel colorectal cancer ISO RGD:1342675 8554872 ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 Etfa Squirrel genetic disease ISO RGD:1342675 8554872 ClinVar Annotator: match by term: Inborn genetic diseases ClinVar PMID:16510302|PMID:23785301|PMID:25741868|PMID:28492532|PMID:30612563 Etfa Squirrel glutaric acidemia type 3 ISO RGD:1342675 8554872 ClinVar Annotator: match by term: Glutaryl-CoA oxidase deficiency ClinVar PMID:31690835 Etfa Squirrel Glutaric Aciduria 2 ISO RGD:1342675 8554872 ClinVar Annotator: match by term: Glutaric acidemia type 2A ClinVar PMID:16510302|PMID:17576681|PMID:18289905|PMID:23785301|PMID:25741868|PMID:28492532|PMID:29096039|PMID:31268564|PMID:9536098 Etfa Squirrel multiple acyl-CoA dehydrogenase deficiency ISO RGD:1342675 8554872 ClinVar Annotator: match by term: Multiple acyl-CoA dehydrogenase deficiency ClinVar PMID:12486872|PMID:12815589|PMID:1430199|PMID:16199547|PMID:16510302|PMID:16546179|PMID:17576681|PMID:18289905|PMID:1882842|PMID:20674745|PMID:20736750|PMID:23785301|PMID:23867278|PMID:25200064|PMID:25741868|PMID:26409463|PMID:28492532|PMID:29096039|PMID:30510944|PMID:30612563|PMID:31268564|PMID:33450351|PMID:33768790|PMID:37541188|PMID:9334218|PMID:9536098 Etfa Squirrel PAPA syndrome ISO RGD:1342675 8554872 ClinVar Annotator: match by term: PAPA SYNDROME ClinVar PMID:28492532 Etfa Squirrel schizophrenia ISO RGD:1342675 8554872 ClinVar Annotator: match by term: Schizophrenia ClinVar PMID:21681106|PMID:30208311
Etfa (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024408640 118,020,782 - 118,094,606 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936471 35,868,757 - 35,943,139 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936471 35,868,851 - 35,942,662 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
ETFA (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 15 76,215,353 - 76,311,469 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 15 76,188,555 - 76,311,730 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 15 76,507,694 - 76,603,810 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 15 74,295,636 - 74,390,865 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 15 74,295,690 - 74,390,784 NCBI Celera 15 53,434,725 - 53,530,031 (-) NCBI Celera Cytogenetic Map 15 q24.2-q24.3 NCBI HuRef 15 53,265,219 - 53,360,736 (-) NCBI HuRef CHM1_1 15 76,628,067 - 76,723,216 (-) NCBI CHM1_1 T2T-CHM13v2.0 15 74,086,268 - 74,182,563 (-) NCBI T2T-CHM13v2.0
Etfa (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 9 55,361,720 - 55,419,528 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 9 55,361,792 - 55,419,527 (-) Ensembl GRCm39 Ensembl GRCm38 9 55,454,436 - 55,512,243 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 9 55,454,508 - 55,512,243 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 9 55,302,243 - 55,360,050 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 9 55,252,660 - 55,310,380 (-) NCBI MGSCv36 mm8 Celera 9 52,696,302 - 52,754,125 (-) NCBI Celera Cytogenetic Map 9 B NCBI cM Map 9 30.13 NCBI
Etfa (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 8 64,731,192 - 64,787,965 (-) NCBI GRCr8 mRatBN7.2 8 55,835,115 - 55,891,890 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 8 55,835,134 - 55,891,969 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 8 61,377,604 - 61,434,383 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 8 59,656,602 - 59,713,381 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 8 57,520,835 - 57,577,614 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 8 60,028,786 - 60,086,352 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 8 60,028,789 - 60,086,403 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 8 58,608,416 - 58,665,383 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 8 59,013,798 - 59,072,013 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 8 59,032,895 - 59,091,022 (-) NCBI Celera 8 55,318,874 - 55,375,436 (-) NCBI Celera Cytogenetic Map 8 q24 NCBI
Etfa (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955450 1,392,479 - 1,451,591 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955450 1,392,526 - 1,451,591 (-) NCBI ChiLan1.0 ChiLan1.0
ETFA (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 16 65,413,801 - 65,512,497 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 15 69,578,211 - 69,676,833 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 15 55,128,686 - 55,227,369 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 15 74,720,198 - 74,818,494 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 15 74,720,198 - 74,818,494 (-) Ensembl panpan1.1 panPan2
ETFA (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 30 39,848,241 - 39,925,809 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 30 39,848,270 - 39,964,823 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 30 39,707,332 - 39,784,202 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 30 40,052,278 - 40,129,606 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 30 40,052,340 - 40,129,601 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 30 40,001,191 - 40,078,170 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 30 40,047,242 - 40,124,599 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 30 40,285,034 - 40,362,157 (+) NCBI UU_Cfam_GSD_1.0
ETFA (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 7 56,450,520 - 56,540,253 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 7 56,450,508 - 56,540,275 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 7 60,946,251 - 61,036,017 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
ETFA (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 26 6,970,593 - 7,075,077 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 26 6,970,584 - 7,076,049 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666048 134,642,527 - 134,750,547 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Etfa (Heterocephalus glaber - naked mole-rat)
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSSTOT00000005958 ⟹ ENSSTOP00000005330
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source SpeTri2.0 Ensembl NW_004936471 35,868,757 - 35,943,139 (+) Ensembl
RefSeq Acc Id:
XM_005316839 ⟹ XP_005316896
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024408640 118,020,782 - 118,094,606 (+) NCBI SpeTri2.0 NW_004936471 35,868,851 - 35,942,662 (+) NCBI
Sequence:
CTCGTTCGCGCGTCTCGCGAGTGTTAGGGTGATTGGCGGAGGCGGTGCAGCTTCGCGGGGCTTGAGGTTGCTGAGGCCGAGGTGACAGCTTGGCCCACTAGAGCAGAGACTATGTTTCGGGTGGCGGC TCCAGGGCAGCTCCGGAGGGCGGCTTCATTGCTCCGATTTCAGAGTACCCTGGTAATAGCTGAGCATGCAGATGACTCGCTAGCACCTATTACCTTAAATACCATCACTGCAGCCAAACATCTTGGAG GTGAAGTGTCTTGCTTAGTTGCTGGAACCAAATGTGACAAGGTGGCACAAGATCTCTGTAAAGTAGCAGGTGTAGCAAAAGTTCTGGTGGCTCAGCATGATGCTTACAAAGGCCTCCTTCCAGAGGAA CTAACACCACTGATTTTGGCAACTCAGAAGCAATTCAATTACACACACATCTGTGCTGGAGCATCTGCCTTTGGAAAGAACCTTCTGCCCAGAATAGCAGCAAAACTTGATGTTGCCCCAATTTCTGA CATCATTGCAATCAAGTCACCTGACACATTTGTGAGAACTATTTATGCAGGAAATGCTTTATGTACAGTGAAGTGTGATGAGAAAGTGAAGGTGTTTTCTGTCCGAGGAACATCTTTTGAAGCTGCAG CAACAAGTGGAGGTAGTGCCAGTTCAGAAAAGGCATCAAGTACTTCGCCAGTGGGAGTGTCAGAGTGGCTTGACCAGAAATTAACGAAAAGTGATCGACCAGAGCTAACTGGTGCCAAAGTAGTGGTG TCTGGTGGTCGGGGTTTGAAGAGTGGAGAAAATTTTAAGCTATTGTATGACTTGGCAGATCAACTTCATGCTGCAGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCA AGTTGGTCAGACAGGAAAAATAGTAGCACCAGAGCTGTATATTGCTGTCGGAATATCTGGAGCTATCCAACATTTAGCTGGGATGAAAGACAGCAAGACAATTGTGGCTATCAACAAAGACCCAGAAG CTCCAATTTTCCAAGTAGCAGATTATGGAATAGTTGCAGATTTATTTAAGGTGGTTCCTGAAATGACCGAACTATTGAAGAAAAAATGAATCATGCTCATGTGTCGAGAAGGAACGCTATGTCAGAGT ATTCAACTGAAATCACAGAAATTTACAATTTGATGAAAAAATTTAACAGCAGCCAGATGCTTTTTATGGGATTATTATTATATTTCTTTTTAATTATGTGTAGTTCCAAATAATTATTTTTTGAAATT TTCTAATTCTGTAATAAAATCTGTAATAAAGCCTTAACTACAGCTTTAAAGCTAC
hide sequence
RefSeq Acc Id:
XP_005316896 ⟸ XM_005316839
- UniProtKB:
I3M708 (UniProtKB/TrEMBL)
- Sequence:
MFRVAAPGQLRRAASLLRFQSTLVIAEHADDSLAPITLNTITAAKHLGGEVSCLVAGTKCDKVAQDLCKVAGVAKVLVAQHDAYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRIAAKLD VAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFEAAATSGGSASSEKASSTSPVGVSEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGF VPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTELLKKK
hide sequence
Ensembl Acc Id:
ENSSTOP00000005330 ⟸ ENSSTOT00000005958
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2018-05-01
Etfa
electron transfer flavoprotein subunit alpha
electron transfer flavoprotein alpha subunit
Symbol and/or name change
5135510
APPROVED