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Gene: Itgb5 (integrin subunit beta 5) Ictidomys tridecemlineatus

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Symbol:

Itgb5

Name:

integrin subunit beta 5

RGD ID:

12615885

Description:

ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cell adhesion (inferred); cell adhesion mediated by integrin (inferred); cell migration (inferred); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH alkaptonuria (ortholog); familial hypocalciuric hypercalcemia (ortholog); Familial Thoracic Aortic Aneurysm 7 (ortholog); FOUND IN cell leading edge (ortholog); glutamatergic synapse (ortholog); synaptic membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

integrin beta-5

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ITGB5 (integrin subunit beta 5)	NCBI	Ortholog
Mus musculus (house mouse):	Itgb5 (integrin beta 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Itgb5 (integrin subunit beta 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Itgb5 (integrin subunit beta 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ITGB5 (integrin subunit beta 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ITGB5 (integrin subunit beta 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ITGB5 (integrin subunit beta 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ITGB5 (integrin subunit beta 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Itgb5 (integrin subunit beta 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	126,509,750 - 126,622,528 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936725	417,433 - 532,760 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936725	417,824 - 530,993 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Itgb5	Squirrel	alkaptonuria		ISO	ITGB5 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Alkaptonuria	ClinVar	PMID:12501223 more ...
Itgb5	Squirrel	familial hypocalciuric hypercalcemia		ISO	ITGB5 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Familial hypocalciuric hypercalcemia	ClinVar	PMID:28492532
Itgb5	Squirrel	Familial Thoracic Aortic Aneurysm 7		ISO	ITGB5 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Aortic aneurysm and familial thoracic 7	ClinVar	PMID:28492532
Itgb5	Squirrel	Primary Lymphedema with Myelodysplasia		ISO	ITGB5 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:19449416 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Itgb5	Squirrel	juvenile rheumatoid arthritis		ISO	ITGB5 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:19565504
Itgb5	Squirrel	thyroid gland disease		ISO	ITGB5 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:23397585

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Itgb5	Squirrel	cell adhesion	involved_in	IEA	UniProtKB-KW:KW-0130	150520179		UniProt	GO_REF:0000043
Itgb5	Squirrel	cell adhesion mediated by integrin	involved_in	IEA	PANTHER:PTN000008800	150520179		TreeGrafter	GO_REF:0000118
Itgb5	Squirrel	cell migration	involved_in	IEA	PANTHER:PTN000008800	150520179		TreeGrafter	GO_REF:0000118
Itgb5	Squirrel	cell migration	involved_in	IEA	UniProtKB:P18084 and ensembl:ENSP00000296181	150520179		Ensembl	GO_REF:0000107
Itgb5	Squirrel	cell-cell adhesion	involved_in	IEA	PANTHER:PTN000008800	150520179		TreeGrafter	GO_REF:0000118
Itgb5	Squirrel	cell-matrix adhesion	involved_in	IEA	PANTHER:PTN000008800	150520179		TreeGrafter	GO_REF:0000118
Itgb5	Squirrel	cell-matrix adhesion	involved_in	IEA	UniProtKB:P18084 and ensembl:ENSP00000296181	150520179		Ensembl	GO_REF:0000107
Itgb5	Squirrel	endodermal cell differentiation	involved_in	IEA	UniProtKB:P18084 and ensembl:ENSP00000296181	150520179		Ensembl	GO_REF:0000107
Itgb5	Squirrel	epithelial cell-cell adhesion	involved_in	IEA	UniProtKB:P18084 and ensembl:ENSP00000296181	150520179		Ensembl	GO_REF:0000107
Itgb5	Squirrel	integrin-mediated signaling pathway	involved_in	IEA	PANTHER:PTN000008800	150520179		TreeGrafter	GO_REF:0000118
Itgb5	Squirrel	integrin-mediated signaling pathway	involved_in	IEA	UniProtKB:P18084 and ensembl:ENSP00000296181	150520179		Ensembl	GO_REF:0000107
Itgb5	Squirrel	integrin-mediated signaling pathway	involved_in	IEA	UniProtKB-KW:KW-0401	150520179		UniProt	GO_REF:0000043
Itgb5	Squirrel	stress fiber assembly	involved_in	IEA	UniProtKB:P18084 and ensembl:ENSP00000296181	150520179		Ensembl	GO_REF:0000107
Itgb5	Squirrel	stress fiber assembly	involved_in	IEA	PANTHER:PTN000008800	150520179		TreeGrafter	GO_REF:0000118
Itgb5	Squirrel	transforming growth factor beta receptor signaling pathway	involved_in	IEA	UniProtKB:P18084 and ensembl:ENSP00000296181	150520179		Ensembl	GO_REF:0000107
Itgb5	Squirrel	transforming growth factor beta receptor signaling pathway	involved_in	IEA	PANTHER:PTN000008800	150520179		TreeGrafter	GO_REF:0000118

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Itgb5	Squirrel	cell leading edge	located_in	ISO	Itgb5 (Mus musculus)	9068941	PMID:18794329	MGI	PMID:18794329
Itgb5	Squirrel	cell surface	located_in	IEA	PANTHER:PTN000008800	150520179		TreeGrafter	GO_REF:0000118
Itgb5	Squirrel	cell surface	located_in	IEA	UniProtKB:P18084 and ensembl:ENSP00000296181	150520179		Ensembl	GO_REF:0000107
Itgb5	Squirrel	focal adhesion	located_in	IEA	PANTHER:PTN000008800	150520179		TreeGrafter	GO_REF:0000118
Itgb5	Squirrel	glutamatergic synapse	is_active_in	ISO	Itgb5 (Mus musculus)	9068941	PMID:16467530	SynGO	PMID:16467530
Itgb5	Squirrel	integrin alphav-beta5 complex	part_of	IEA	UniProtKB:P18084 and ensembl:ENSP00000296181	150520179		Ensembl	GO_REF:0000107
Itgb5	Squirrel	integrin complex	part_of	IEA	PANTHER:PTN000008800	150520179		TreeGrafter	GO_REF:0000118
Itgb5	Squirrel	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
Itgb5	Squirrel	plasma membrane	located_in	IEA	UniProtKB-KW:KW-1003	150520179		UniProt	GO_REF:0000043
Itgb5	Squirrel	plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0039	150520179		UniProt	GO_REF:0000044
Itgb5	Squirrel	receptor complex	part_of	IEA	UniProtKB:P18084 and ensembl:ENSP00000296181	150520179		Ensembl	GO_REF:0000107
Itgb5	Squirrel	synaptic membrane	is_active_in	ISO	Itgb5 (Mus musculus)	9068941	PMID:16467530	SynGO	PMID:16467530

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Itgb5	Squirrel	integrin binding	enables	IEA	PANTHER:PTN000008800	150520179		TreeGrafter	GO_REF:0000118
Itgb5	Squirrel	protein binding	enables	ISO	UniProtKB:P97479	9068941	PMID:24997346	IntAct	PMID:24997346
Itgb5	Squirrel	protein binding	enables	ISO	UniProtKB:A8MQ03 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
Itgb5	Squirrel	protein binding	enables	ISO	UniProtKB:A2ABF9 more ...	9068941	PMID:25416956	IntAct	PMID:25416956
Itgb5	Squirrel	protein binding	enables	ISO	UniProtKB:P12931 and UniProtKB:P48357	9068941	PMID:19910644	UniProt	PMID:19910644
Itgb5	Squirrel	protein binding	enables	ISO	UniProtKB:Q9BY76	9068941	PMID:21397862	IntAct	PMID:21397862
Itgb5	Squirrel	protein binding	enables	ISO	UniProtKB:Q7Z6J6	9068941	PMID:25448675	IntAct	PMID:25448675
Itgb5	Squirrel	protein binding	enables	ISO	UniProtKB:Q9HD67	9068941	PMID:21642953	IntAct	PMID:21642953
Itgb5	Squirrel	protein binding	enables	ISO	UniProtKB:P06756	9068941	PMID:1694173	IntAct	PMID:1694173
Itgb5	Squirrel	protein binding	enables	ISO	UniProtKB:P48745	9068941	PMID:15611078	UniProt	PMID:15611078
Itgb5	Squirrel	protein binding		ISO	Cd9 (Rattus norvegicus) more ...	9068941		RGD	PMID:17684062 and REF_RGD_ID:2302243
Itgb5	Squirrel	signaling receptor binding		ISO	Casr (Rattus norvegicus)	9068941		RGD	PMID:21969374 and REF_RGD_ID:7205691

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Itgb5	Squirrel	integrin mediated signaling pathway		ISO	ITGB5 (Homo sapiens)	9068941		RGD	PMID:17543136 more ...

PMID:30032202

Itgb5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	126,509,750 - 126,622,528 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936725	417,433 - 532,760 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936725	417,824 - 530,993 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ITGB5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	124,761,948 - 124,901,418 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	124,761,948 - 124,901,418 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	124,480,795 - 124,620,265 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	125,964,485 - 126,088,834 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	125,964,485 - 126,088,834	NCBI
Celera	3	122,889,001 - 123,012,953 (-)	NCBI		Celera
Cytogenetic Map	3	q21.2	NCBI
HuRef	3	121,856,362 - 121,980,193 (-)	NCBI		HuRef
CHM1_1	3	124,444,943 - 124,568,708 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	127,487,791 - 127,626,839 (-)	NCBI		T2T-CHM13v2.0

Itgb5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	33,650,021 - 33,769,708 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	33,650,035 - 33,769,708 (+)	Ensembl		GRCm39 Ensembl
GRCm38	16	33,829,665 - 33,949,338 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	33,829,665 - 33,949,338 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	33,829,751 - 33,949,424 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	33,749,506 - 33,868,893 (+)	NCBI		MGSCv36	mm8
Celera	16	34,313,798 - 34,433,456 (+)	NCBI		Celera
Cytogenetic Map	16	B3	NCBI
cM Map	16	24.22	NCBI

Itgb5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	80,333,588 - 80,449,373 (-)	NCBI		GRCr8
mRatBN7.2	11	66,828,428 - 66,944,231 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	66,829,285 - 66,944,472 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	75,661,894 - 75,777,337 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	68,323,780 - 68,439,208 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	67,354,354 - 67,469,799 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	70,056,500 - 70,172,164 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	70,056,500 - 70,172,372 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	73,146,146 - 73,261,215 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.1	11	68,699,866 - 68,710,334 (+)	NCBI
Celera	11	66,279,067 - 66,394,763 (-)	NCBI		Celera
Cytogenetic Map	11	q22	NCBI

Itgb5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955427	23,850,261 - 23,939,950 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955427	23,851,475 - 23,952,211 (-)	NCBI	ChiLan1.0	ChiLan1.0

ITGB5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	122,722,310 - 122,883,230 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	122,727,098 - 122,887,634 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	121,863,676 - 122,013,438 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	128,762,200 - 128,873,887 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	128,762,200 - 128,877,172 (-)	Ensembl	panpan1.1		panPan2

ITGB5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	33	27,797,204 - 27,912,558 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	33	27,797,667 - 27,912,584 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	33	27,820,964 - 27,935,930 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	33	28,033,980 - 28,149,103 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	33	28,033,989 - 28,149,299 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	33	27,829,232 - 27,945,045 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	33	27,873,552 - 27,988,833 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	33	28,492,316 - 28,607,994 (-)	NCBI		UU_Cfam_GSD_1.0

ITGB5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	135,467,798 - 135,587,473 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	135,468,111 - 135,587,483 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	145,042,442 - 145,111,929 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ITGB5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	55,944,810 - 56,070,605 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	55,944,865 - 56,069,930 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	110,252,879 - 110,375,605 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Itgb5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	802,854 - 914,167 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624731	804,272 - 914,204 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005338875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000007976 ⟹ ENSSTOP00000007138

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936725	418,260 - 530,419 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000034317 ⟹ ENSSTOP00000026388

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936725	417,433 - 532,760 (+)	Ensembl

RefSeq Acc Id:

XM_005338875 ⟹ XP_005338932

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	126,509,750 - 126,622,528 (+)	NCBI
SpeTri2.0	NW_004936725	417,824 - 530,993 (+)	NCBI

Sequence:

show sequence

TGGAGCCTGGCGGGCCGGAGGGAGGAAGGGAAGGGGCGGAGGCGAAGTGCAGAGTGTGCCGGCGCGCGGGGGAGCCTCAGCGCGGGGCGCGTCCGGGAGCCCAAGTCGCGGACGCCGCGCGGAGCCAG
TCCCTCCCCTGCCCAGAGCAGCCCGCACGAGCTGTCCCGAACCGCAACACCCGGGCGTCCCGGCCTGCCATCTAGGACAGCGGCGACCGGGAGACTCGGTTGCGAGCGCTGCGGGAGGGATGGTGGCG
ACCGGGCGCGGGCCAGCGCAGCCGCCCCTTCCTCTCGCTCGGCTGTGGGCGCCTTGAGTCCGAACTGCGAGCGGGGCATGAGGCTGCGGCCCCCAGCTTTAGGCCCCCGCGCCCTGGCCCCCGCCACG
CGACCCTGCGGAGTTTGTCGCCCGCGCCGCCGCTGAGGCCGGGCGACCCACCATGCCGCGGGCCCCGGCGCCCCTGTACGCCTGCCTCCTCGGGCTTTGCGCGCTCGTGCCGCCGCTCCCAGGGCTCA
ACATTTGCACCAGTGGAAGTGCCACCTCGTGTGAAGAATGTCTGCTAATCCACCCAAAATGTGCCTGGTGCTCCAAAGAGGACTTTGGCAGCCCACGGTCAGTCACTTCCCGGTGTGATTTGAGGGCA
AATCTCATCCGAAATGGCTGCGGAGGTGAGATCGAGAGCCCGGCCAGCAGCGCCCGTGTCCTGCGGAACCTGCCTCTCAGCAGCGAGGGCTCCAGTGCTGCAGGCTCCGATGTCATTCAGATGGCGCC
ACAGGAGATTGCCGTGAGCCTCCGGCCTGGTGACCAGACCACCTTCCAGCTGCAGGTTCGCCAGGTGGAGGACTATCCTGTGGACTTGTACTACCTGATGGACCTCTCCCTGTCCATGAAGGATGATT
TGGACAACATCCGAAGCCTGGGCACCAAGCTCGCTGAGGAGATGAGAAAGCTCACCAGCAACTTCCGGTTGGGCTTTGGGTCTTTTGTTGACAAGGACATCTCTCCCTTCTCCTACACGGCACCGAGA
TACCAGACCAATCCATGCATTGGTTACAAGTTATTTCCAAACTGCGTCCCCTCCTTTGGGTTCCGCCATCTGCTGCCTCTCACTGACAGAGTCGACAGCTTCAATGAGGAAGTTCGGAAGCAGAGGGT
GTCCCGCAACCGAGATGCCCCGGAGGGAGGCTTTGATGCAGTCCTCCAGGCATCTGTCTGCAAGGAGAAGATCGGCTGGCGAAAGGACGCCCTGCACTTGCTGGTGTTCACAACGGACGATGTGCCCC
ACATCGCACTGGATGGAAAACTGGGGGGCCTGGTGCAGCCACATGATGGCCAGTGTCACCTGAATGAGGCCAACGAGTACACTGCATCCAATCAGATGGACTATCCGTCCCTTGCCTTGCTTGGAGAG
AAGCTGGCAGAGAACAACATCAACCTCATTTTTGCAGTGACGAAAAACCACTATATGCTCTACAAGAATTTTACAGCCCTGATACCTGGGACCACAGTGGAGATTTTACATGGAGATTCCAAGAACAT
CATTCAGCTGATTATCAATGCATACAATAGTATCCGGTCTAAGGTGGAGCTGTCGGTCTGGGATCAGCCTGAGGATCTCAATCTCTTCTTCACTGCCACCTGCCAAGATGGCGTATCCTACCCAGGAC
AGAGGAAGTGTGAAGACCTGAAGATTGGGGACACGGCGTCCTTTGAGGTGTCAGTGGAGGCCCGGAGCTGCCCCAGCAGACCCGTGGAGCACGCGTTCACCCTGCGGCCTGTGGGGTTCCGGGACAGC
CTGCAGGTGAGGGTCACCTACAACTGCACCTGCGGCTGCAGCGCGGGGCTGGAGCCCGACAGCGCCAGATGCAGTGGGAACGGGACCTACATCTGCGGCCTCTGCGAGTGCAACCCCAGCTACCTGGG
CACCAGGTGCGAGTGCCAGGAGGGGGAGAACCAGAGCGTGTACCAGAACCTGTGCCGGGAGGCAGAGGGCAAGCCGCTGTGCAGCGGGCGAGGTGAGTGCAGCTGCAACCAGTGCTCCTGCTTCGAGA
GCGAGTTCGGGAAGATCTACGGGCCTTTCTGCGAGTGCGATAACTTCTCCTGTGCCAGGAACAAGGGCGTCCTCTGCTCAGGCCATGGTGAGTGTCACTGCGGAGAATGCAAGTGCCATGCAGGTTAC
ATTGGGGACAATTGTAACTGCTCAACAGACATCAGCACGTGCCAGGCCAAGGATGGGCAGATCTGTAGCAACCGTGGAAACTGCATCTGTGGGCAATGCCAGTGCACAGAGCCCGGAGCCTTTGGGGA
GACATGTGAGAAGTGTCCAACCTGCCCAGACGCTTGCAGCACCAAGAGAGATTGCGTTGAGTGCTTGCTGCTTCACTCAGGGAAACCTGACAATCAGACCTGCCAGCACCTGTGCAAGGACGAGGTGA
TCACGTGGGTGGACACCATCGTCAAAGATGACCAGGAGGCTGTGCTTTGCTTCTATAAAACTGCCAAGGACTGCATCATGACGTTCAGCTACGCAGACCTGCCCAGCGGGAAGACCAACCTGACGGTG
CTGAGGGAGCCAGAGTGTGGGACTGCCCCCAACGCCATGACCATTTTGCTGGCCGTGGTCGGCAGCATCCTCCTGATTGGGATTGCACTCCTGGCCATCTGGAAGCTGCTTGTCACCATCCATGACCG
AAGAGAATTTGCCAAGTTCCAAAGTGAACGCTCCAGGGCGCGCTATGAGATGGCTTCAAACCCCCTCTACAGAAAGCCCATCTCCACTCACACCGTGGATTTCACCTTCAACAAGTTCAACAAATCCT
ACAACGGCACCGTGGACTGACAAGGCCCCCTCCCAGAGAGGTGCAGAGGGATTAACAAAAAATACTGCCAGGCCTGGACAGCTGCTCACGTGATCACAGCTCCCTAGATAGGCAAGCACAGAGAAGCC
CTTCCCACCAGCCTGGGCAAGGAGCCCACCACCTGCCCAAGAGGGCGCCTGGCCATGCCACCTGGCTGCTGGGCCAGAGCCACGCAAGGCCACCTCCCCTCCAAGCCTGGAAAAGCAAGAGGACTTGG
CGCTCCTGGCTTTCTCCGCCATGTCCAGCATCTTGTCTTGATGAACTGCTGAGATGCTGGGCTGCTTCTGCCTCCCTCGCTGGCCAGAGAAAAGGCTCCTGGGAAGGGCCGGAGTGTGCAAAGCCAAC
CTGTGGCCTGAATATTTTGCCCGTTGGTCATTTTTATATGAAATAAAAAGATCATGCATTTATGGCGTAGTTCTGAGGGCTGGGACTCCTCCGCCTGGTGTCTGTGCCCTGCACATGGGTGTTGGTGA
TGGATGGTTAGGTGCCTGTTGAAGGTGCATAGTTTGCGAACGTCTGTTTTCCTCTCCTGTCCGTGTTTGTTTAGTACTTTTGTAATGAAATGGAAAAAGATTGTCTGCAATTGAAAGTAAAGATTCAA
ACAAAATGCGCTGGTGTCCGCCTGA

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Protein RefSeqs	XP_005338932	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000007138.3
	ENSSTOP00000026388.1
GenBank Protein	KAG3271301	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005338932 ⟸ XM_005338875

- UniProtKB:

A0A287CYP1 (UniProtKB/TrEMBL), I3MAS5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPRAPAPLYACLLGLCALVPPLPGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSVTSRCDLRANLIRNGCGGEIESPASSARVLRNLPLSSEGSSAAGSDVIQMAPQEIAVSLRPGDQTTFQL
QVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQA
SVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILHGDSKNIIQLIINAYNSIRSKVEL
SVWDQPEDLNLFFTATCQDGVSYPGQRKCEDLKIGDTASFEVSVEARSCPSRPVEHAFTLRPVGFRDSLQVRVTYNCTCGCSAGLEPDSARCSGNGTYICGLCECNPSYLGTRCECQEGENQSVYQNL
CREAEGKPLCSGRGECSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCQAKDGQICSNRGNCICGQCQCTEPGAFGETCEKCPTCPDACSTKRD
CVECLLLHSGKPDNQTCQHLCKDEVITWVDTIVKDDQEAVLCFYKTAKDCIMTFSYADLPSGKTNLTVLREPECGTAPNAMTILLAVVGSILLIGIALLAIWKLLVTIHDRREFAKFQSERSRARYEM
ASNPLYRKPISTHTVDFTFNKFNKSYNGTVD

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Ensembl Acc Id:

ENSSTOP00000026388 ⟸ ENSSTOT00000034317

Ensembl Acc Id:

ENSSTOP00000007138 ⟸ ENSSTOT00000007976

Protein Domains

Integrin beta subunit cytoplasmic Integrin beta subunit tail Integrin beta subunit VWA PSI VWFA

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000007965	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000007976.3	UniProtKB/TrEMBL
	ENSSTOT00000034317.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.410	UniProtKB/TrEMBL
	4.10.1240.30	UniProtKB/TrEMBL
	Cytochrome c1, transmembrane anchor, C-terminal	UniProtKB/TrEMBL
	Laminin	UniProtKB/TrEMBL
	ligand-binding face of the semaphorins, domain 2	UniProtKB/TrEMBL
	ntegrin, alpha v. Chain A, domain 3	UniProtKB/TrEMBL
InterPro	EGF_extracell	UniProtKB/TrEMBL
	I-EGF_1	UniProtKB/TrEMBL
	Integrin_beta_N	UniProtKB/TrEMBL
	Integrin_bsu	UniProtKB/TrEMBL
	Integrin_bsu_cyt_dom	UniProtKB/TrEMBL
	Integrin_bsu_tail	UniProtKB/TrEMBL
	Integrin_bsu_tail_dom_sf	UniProtKB/TrEMBL
	Integrin_bsu_VWA	UniProtKB/TrEMBL
	Integrin_dom_sf	UniProtKB/TrEMBL
	PSI	UniProtKB/TrEMBL
	VWF_A	UniProtKB/TrEMBL
	vWFA_dom_sf	UniProtKB/TrEMBL
NCBI Gene	Itgb5	ENTREZGENE
PANTHER	PTHR10082	UniProtKB/TrEMBL
	PTHR10082:SF26	UniProtKB/TrEMBL
Pfam	EGF_2	UniProtKB/TrEMBL
	I-EGF_1	UniProtKB/TrEMBL
	Integrin_b_cyt	UniProtKB/TrEMBL
	Integrin_B_tail	UniProtKB/TrEMBL
	Integrin_beta	UniProtKB/TrEMBL
	PSI_integrin	UniProtKB/TrEMBL
PIRSF	Integrin_B	UniProtKB/TrEMBL
PRINTS	INTEGRINB	UniProtKB/TrEMBL
PROSITE	INTEGRIN_BETA	UniProtKB/TrEMBL
SMART	INB	UniProtKB/TrEMBL
	Integrin_b_cyt	UniProtKB/TrEMBL
	Integrin_B_tail	UniProtKB/TrEMBL
	PSI	UniProtKB/TrEMBL
	VWA	UniProtKB/TrEMBL
Superfamily-SCOP	EGF/Laminin	UniProtKB/TrEMBL
	Plexin repeat	UniProtKB/TrEMBL
	SSF53300	UniProtKB/TrEMBL
	SSF69179	UniProtKB/TrEMBL
	SSF69687	UniProtKB/TrEMBL
UniProt	A0A287CYP1	ENTREZGENE, UniProtKB/TrEMBL
	I3MAS5	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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