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Gene: Marchf1 (membrane associated ring-CH-type finger 1) Ictidomys tridecemlineatus

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Symbol:

Marchf1

Name:

membrane associated ring-CH-type finger 1

RGD ID:

12615017

Description:

ENCODES a protein that exhibits MHC protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class II (ortholog); immune response (ortholog); protein polyubiquitination (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endosome (ortholog); late endosome membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

E3 ubiquitin-protein ligase MARCH1; E3 ubiquitin-protein ligase MARCHF1; March1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	16,472,621 - 17,186,316 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936555	1,610,268 - 2,097,985 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936555	1,810,896 - 2,097,870 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Marchf1	Squirrel	COVID-19		ISO	RGD:1354489	9068941	mRNA:increased expression:peripheral blood mononuclear cell (human)	RGD	PMID:32228226\|REF_RGD_ID:28912744

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Marchf1	Squirrel	antigen processing and presentation of peptide antigen via MHC class II	involved_in	ISO	RGD:1354489	9068941	PMID:18389477	UniProt	PMID:18389477
Marchf1	Squirrel	antigen processing and presentation of peptide antigen via MHC class II	involved_in	ISO	RGD:1552868	9068941	PMID:17255932, PMID:19917682	UniProt	PMID:17255932\|PMID:19917682
Marchf1	Squirrel	immune response	involved_in	ISO	RGD:1354489	9068941	PMID:18305173, PMID:18389477	UniProt	PMID:18305173\|PMID:18389477
Marchf1	Squirrel	immune response	involved_in	ISO	RGD:1552868	9068941	PMID:17255932, PMID:19917682	UniProt	PMID:17255932\|PMID:19917682
Marchf1	Squirrel	immune system process	involved_in	IEA	UniProtKB-KW:KW-0391	150520179		UniProt	GO_REF:0000043
Marchf1	Squirrel	protein polyubiquitination	involved_in	ISO	RGD:1552868	9068941	PMID:17255932	UniProt	PMID:17255932
Marchf1	Squirrel	protein polyubiquitination	involved_in	ISO	RGD:1354489	9068941	PMID:27577745	CACAO	PMID:27577745
Marchf1	Squirrel	protein polyubiquitination	involved_in	ISO	RGD:1354489	9068941	PMID:19117940	UniProt	PMID:19117940

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Marchf1	Squirrel	cytoplasmic vesicle	located_in	IEA	UniProtKB-KW:KW-0968	150520179		UniProt	GO_REF:0000043
Marchf1	Squirrel	cytoplasmic vesicle membrane	located_in	IEA	UniProtKB-SubCell:SL-0089	150520179		UniProt	GO_REF:0000044
Marchf1	Squirrel	early endosome membrane	located_in	IEA	UniProtKB-SubCell:SL-0093	150520179		UniProt	GO_REF:0000044
Marchf1	Squirrel	endoplasmic reticulum	located_in	IEA	UniProtKB:D6RGC4\|ensembl:ENSP00000421322	150520179		Ensembl	GO_REF:0000107
Marchf1	Squirrel	endoplasmic reticulum membrane	located_in	ISO	RGD:1552868	9068941	PMID:19880452	UniProt	PMID:19880452
Marchf1	Squirrel	endosome	located_in	ISO	RGD:1354489	9068941	PMID:14722266	UniProt	PMID:14722266
Marchf1	Squirrel	Golgi apparatus	located_in	IEA	UniProtKB:D6RGC4\|ensembl:ENSP00000421322	150520179		Ensembl	GO_REF:0000107
Marchf1	Squirrel	late endosome membrane	located_in	ISO	RGD:1354489	9068941	PMID:19117940	UniProt	PMID:19117940
Marchf1	Squirrel	late endosome membrane	located_in	ISO	RGD:1552868	9068941	PMID:19880452	UniProt	PMID:19880452
Marchf1	Squirrel	lysosomal membrane	located_in	IEA	UniProtKB-SubCell:SL-0157	150520179		UniProt	GO_REF:0000044
Marchf1	Squirrel	lysosome	located_in	ISO	RGD:1354489	9068941	PMID:14722266	UniProt	PMID:14722266
Marchf1	Squirrel	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
Marchf1	Squirrel	plasma membrane	located_in	ISO	RGD:1354489	9068941	PMID:19117940	UniProt	PMID:19117940
Marchf1	Squirrel	trans-Golgi network membrane	located_in	ISO	RGD:1552868	9068941	PMID:19880452	UniProt	PMID:19880452

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Marchf1	Squirrel	MHC protein binding	enables	ISO	RGD:1354489	9068941	PMID:18389477	UniProt	PMID:18389477
Marchf1	Squirrel	ubiquitin protein ligase activity	enables	ISO	RGD:1552868	9068941	PMID:17255932	MGI	PMID:17255932
Marchf1	Squirrel	ubiquitin protein ligase activity	enables	ISO	RGD:1354489	9068941	PMID:14722266, PMID:18305173, PMID:18389477, PMID:19117940	UniProt	PMID:14722266\|PMID:18305173\|PMID:18389477\|PMID:19117940
Marchf1	Squirrel	ubiquitin-protein transferase activity	enables	ISO	RGD:1552868	9068941	PMID:17255932	UniProt	PMID:17255932
Marchf1	Squirrel	zinc ion binding	enables	IEA	InterPro:IPR011016	150520179		InterPro	GO_REF:0000002
Marchf1	Squirrel	zinc ion binding	enables	IEA	UniProtKB-KW:KW-0863	150520179		UniProt	GO_REF:0000043

PMID:22301074	PMID:30032202

Marchf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	16,472,621 - 17,186,316 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936555	1,610,268 - 2,097,985 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936555	1,810,896 - 2,097,870 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MARCHF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	163,524,298 - 164,384,019 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	163,524,298 - 164,384,050 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	164,445,450 - 165,305,171 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	164,668,499 - 164,754,226 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	164,806,653 - 164,892,381	NCBI
Celera	4	161,777,720 - 162,636,895 (-)	NCBI		Celera
Cytogenetic Map	4	q32.2-q32.3	NCBI
HuRef	4	160,199,325 - 161,058,221 (-)	NCBI		HuRef
CHM1_1	4	164,421,900 - 165,280,873 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	166,872,170 - 167,731,735 (-)	NCBI		T2T-CHM13v2.0

Marchf1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	66,070,558 - 66,925,761 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	66,070,552 - 66,924,289 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	65,618,009 - 66,472,841 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	65,617,900 - 66,471,637 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	68,141,939 - 68,995,536 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	68,547,514 - 69,399,416 (+)	NCBI		MGSCv36	mm8
Celera	8	68,174,462 - 69,027,711 (+)	NCBI		Celera
Cytogenetic Map	8	B3.1	NCBI
cM Map	8	33.06	NCBI

Marchf1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	28,022,159 - 28,880,872 (-)	NCBI		GRCr8
mRatBN7.2	16	23,255,551 - 24,114,290 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	23,258,799 - 24,114,277 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	26,618,960 - 27,482,348 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	30,053,672 - 30,917,036 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	25,992,293 - 26,875,346 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	24,998,709 - 25,856,327 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	25,001,666 - 25,192,675 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	24,882,375 - 25,407,999 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	24,971,361 - 25,496,590 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	24,971,358 - 25,055,466 (-)	NCBI
Celera	16	23,375,326 - 23,888,905 (-)	NCBI		Celera
Cytogenetic Map	16	p14-p13	NCBI

Marchf1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	41,060,246 - 41,484,734 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	41,187,039 - 41,484,734 (+)	NCBI	ChiLan1.0	ChiLan1.0

MARCHF1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	161,340,439 - 162,192,916 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	161,702,902 - 162,551,136 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	155,791,599 - 156,639,456 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	167,579,850 - 168,692,736 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	167,583,874 - 168,153,648 (-)	Ensembl	panpan1.1		panPan2

MARCHF1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	59,753,597 - 60,279,692 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	59,753,216 - 60,036,060 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	60,118,313 - 60,912,318 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	60,512,737 - 61,307,283 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	60,513,004 - 60,795,213 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	59,745,776 - 60,561,370 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	59,837,018 - 60,638,108 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	60,206,169 - 61,004,664 (-)	NCBI		UU_Cfam_GSD_1.0

MARCHF1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	52,375,514 - 52,951,033 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	52,375,510 - 52,951,031 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	55,502,841 - 55,523,454 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MARCHF1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	109,978,620 - 110,783,623 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	109,979,056 - 110,063,661 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	89,799,273 - 90,615,833 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Marchf1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624758	12,878,810 - 13,319,814 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624758	12,528,242 - 13,321,851 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_021729086	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729087	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293424	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293429	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293435	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293440	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293461	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293468	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000005511 ⟹ ENSSTOP00000004930

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936555	1,610,268 - 2,095,593 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000030535 ⟹ ENSSTOP00000032609

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936555	1,810,936 - 2,097,985 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000036721 ⟹ ENSSTOP00000030209

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936555	1,810,936 - 2,097,985 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000042561 ⟹ ENSSTOP00000025588

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936555	1,690,785 - 2,093,811 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000042753 ⟹ ENSSTOP00000025087

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936555	1,690,185 - 2,095,593 (+)	Ensembl

RefSeq Acc Id:

XM_021729087 ⟹ XP_021584762

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,472,621 - 16,879,714 (-)	NCBI
SpeTri2.0	NW_004936555	1,810,896 - 2,097,870 (+)	NCBI

Sequence:

show sequence

AGAATTTCAGAAATTGAAAAGGGAAAAGAGGAAGGAGAAAATGCTGGGCTGGTGTGAAGCGATAGCCCGTAACCCTCACAGAATCCCAAACAACACGCGAACACCCGAGATCTCAGGGGATTTGGCTG
ATACCTCTCAAACCTCCACATTGAACGACAAATCCCCAGGACGATCTGCCAGTCGATCAAGTAACATTTCAAAAGCCAGCAGCCCAACGACAGGGGCAGCTCCCAGGAGCCAGTCAAGGTTGTCTGTC
TGTCCATCCACTCAGGACATTTGCAGATCTTCCATCTTACATGACATGTCAGAAGATGCATTTGAGCACTGCACCCCTGTCGTGGTGCTGGGTCCTGCTAGGAAGGAGTGTGGTAAGAAACCAGTAAA
ACACAAGCCTAGGAGGAGGAGAAGGGCCTCGGAGAGATACAAGCATGCAGAAGAACAAATAAAAGGGGGGAAAAATGACTTTCACCTCCAGATCTCAAGCCCCAGATGGAGAGAACTTTACACAGATT
CTTCAGACTCGTCTTCCACAGATGAGAATCACTGGATTCAGACAAAAAAGAGAGCCCAGGTTAAGTTCCGACTGTCACGAAGAAGGAGAAATAATAATAAGCCCTGTGGAAACTCGGCTGCGTCTTCC
ACTCCTAATGGAATTGAGCTTGTCGATCTGGGATCCAAAGGTGAGAAGCAGCAGGAGCCAAAGGAATGTGAGAGTTGCTCTTTAAACCTCTGCAGAGGAAAAGTCCTAAGGTACCAAGAAGGATCCTT
TGAGACGAAGAGACCCTCAAGGAACCATGAGAGAAACAAAGTTAGATACCACTGCAGGGATTCTCAGCTCTTGCACAGTCTTAGGCAAAATGAAACAATCAAGAAAGGATTTTCAGAAATGGATTCCA
GCACTGAAATACTGGCAGTTGCAGGAGGCAGCCAGTCCATGGACAATACAGGGCTCCAGGTGAATAACGCTATTCAGAATCCTCCAGCCACCTACGATGATCACTTAGCAGTGTGCAGGATCTGTCAC
TGCGAAGGGGATGAAGAGAGCCCCCTCATCACACCCTGTCGCTGCACGGGGACCCTGCGCTTTGTCCACCAGTCCTGCCTCCACCAGTGGATCAAGAGCTCAGACACGCGCTGCTGCGAACTCTGCAA
ATATGACTTCATAATGGAGACCAAGCTCAAACCCCTCCGGAAGTGGGAAAAACTACAGATGACAACAAGTGAAAGGAGAAAAATATTCTGCTCTGTCACATTCCATGTCATCGCCATCACCTGTGTGG
TTTGGTCTTTGTACGTGTTGATAGACAGGACGGCGGAGGAAATCAAGCAAGGCAATGACAATGGTGTCCTTGAATGGCCATTTTGGACAAAACTGGTTGTGGTGGCCATTGGCTTCACAGGAGGTCTC
GTCTTCATGTATGTACAGTGTAAAGTCTATGTCCAATTGTGGCGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTGCAGAATTGCCCAGACACTGCCAATAAGCTTGAGAAGAACTTCTCGTGTAA
CGTAAATACGGACACCAAGGAGGCTGTGGTGGTGCCAATATCACAAACGGGTACAAATTCACTGCCGTCTGCAGAGAGCGGTCCCCCAGAAGTCATACCAGTTTGATGGAACCAGTTGACAGTTTCTT
CTCAGAAGACCGACTTTCTAGCCTCAGCCACTACAATTGACTGAAGTGATCCTGCATTACTCACTTCCTTTATCGGCTCCTTGCTCCTACTGACTCATTTTTCCTTACTTTGCTCAAAAAGGACAGAA
GGAAAAAACATCAAATGAGCAGGACACCAGGAAGCGAGCCTGAAGTGATACGGAAATGTGAAGATGGCTAGAGAATGACTTCTAAGACAATACAGAACTGTTGGTACCGGAATGCTTTTAAGCAATGA
CAAATTAAATGGACACATGATACTCTTCGTAGTAGCAGGGGAAAAGTTCAAGAATATAGACTTGACTTGTAACATGTGTTTCTTCTAAGGGTCTTGTAATGTTAGCTATCTCATCTGGATAAACACAT
CTGGTTTTAAGCCTGAAATTGTCTGCATTATTCCTGTCATACTGGAAGCAAACTTGGAGGATGCATATTTTGATATTCTTTGACAGCTGACAGATTTTTATGGCAATAGTGAAGTCTGGTTATTTTGA
CAGATGCATGTTATAAAAATGGATGCAATACACATTTGAAGATAGTAATACTTGGAACTATGTTTGAATCATGAACAAAAGATTTTCATAAGATTATTGGGTGACATTAGCTCTTTTAAATGCCCACA
AAAGTTGAAATCATCTAACGGGTCCTATATTTTACCTGGCCCTTCTAATACAGGGCTGTCCAACAGAAATACACCTCGAACTACAAATGTAAGCACAAATGCAAATTTTAAATTTACAGGTAGCCCCT
TTATAAAAAGTAAAAGTAAATAGGTGAAATTAATTTTTATAATTTAACACCATATGCTATCAATGTAAAACATTATTGAAACAGTCATTTTTTTAAATCAATTCTTCAAAATCCAGTATGCATTTCAC
AACACACCTGTTTGGATGAACTAAATTGGATAGCATGGCCCTAATTAGAGACTAAGGCTCTACTTTATTTAATGGCTGAATATTTCAAAATAAAAGCTTAATTTATTCCTTTATTTTCAAGTTTCATT
GAAGGGTTATGATTTTACAAAGCACTAAGTTGATCAAATTAAGTGTCCTGGTTTGAAGAATTAGATGAAGTTGCCATTTCTCTAAGAAAACTAAATTTTTTAAAAAAGCAATCTGCTTGTAGCAAAAT
TGTGAAATTAACTTCTGTTTGCTACAATGAAGCAACAATAGGGAAATAAAAATTAAGTATTTTTGTTATTAAATCACAAGTGTTTTTCTTACTCCATATGAGTGTCAACTTGACTGATAAGTAGTTAC
AGCCACAAACTAGATCTTATTTTAAAAAGTTGACAATATATTCCTTGACAGTTCAGAAGCAAAAACATTCAACAGATTCTATGGTAAGTAATAAATTGAGTTGTTTAGGTTTGACAATTGATTATTGC
ATTCTTTAAATACTCATATAAAACTGAAGTATGAATGATATTGCAGAGAGCTAGATTAATAATTACAAGCATAGTGACCTGTCAAAGAAAGATGGCCTAGTAAAAAAGTGATTTTTATTAGCTGTCAT
ATTTATTATTGTGAAAAGGCAGAGAAGGCCATAAGAACCAAAGCATGGGTATCACATTGCACAAATCTGGGTATCACATCAATGCACTTTGTAATTATCAGTGTGCTTGTTCTTCACAGATTATCAAA
GGAAAAAAATAACCTTTTAAAAAGAGGAGAAAGTATGGATATTAGTAGTGGCTGATATGGAGTCCAAATAGCCACATTCCTAGAAATAAAGAAAAGGTAAACAATGTTGATTTTGTGTGTGTGGCATG
TGTGTATTCATGTATATATGTGAGAAAAATGTTAAGGTATTCAGTCAGGAAACAAAAGGTTTAAAACTCATCTTTCTTAAAACTTTTAGGGGATGGAGTAAAGGCACAAGGAAAACAAAGTGGAGGTT
ATTAAACTGGACCAAAACTACAGCAGGAATGACTTCAGTGAACCTTAAACAAACTAAACTGCATTTACTTCCCCTATAAAGTGTGAAGACAAATGTACTAAAAATAACAAAGCTTGGGTGATTTAATC
ATAGCACCACACCCAAGGAATTAACCTTGATCGTATTTTCCTGTTAATTTGCTTAATCCATTTCTCTATGGTTTAGCAAGGGCAATATGTTGCTTGCAAATATTTCATGGGAGAAAATCTCATCTCTA
GCAAACAAAGAAATATTGATTCCTCTTTTGTTTGCTCTGAAAGAAAAGCATTATTTACCTTAATTACCAGGGAAAATACTGTTTTAAATCCAAAATAGATAAGAGTATATCTTTGCACAGTGAAAGAT
GATTGGCTAAAATAAAACCTTACTTATCAAGGGCTACATTTAACACTAAGAAACATTTCTAAAAAGCTAAGACAAGCTTTGCTGTATTAGTGATAAAAGATGAAATGGTTTTAAAACTGTGCCCAAAG
TCTCAAAATTAACTTTCTTAGGTTTTGATTTTATTGAAATGAGAAAATAATAAAGCTCCCTAACAGGATAAAAGTCAACATTTAATTCTGTTCTTCTTCTGACCTTTCAAAATCCTAACCTGAATTTC
ATTTTAAAAAATTCACTGCAGAAAAGTTTCATTAAAAAGCTTTCCTGCAATGGATGTTTGTGGTTCACCTGATTTGGAACAACTACATTCACTTAAAACCTAATGTTAATTCATTTACATTCCCTATG
GCAATGGTACCTTTTTCCTTTCATCACTGAAAATATTTGGCTTTGTGGCAGTGCTTTTTGGTGAACTGATTTATCTCTCAAAAAGAAAAAATGAGCTATGGAATGACAATTTTTTGAGGCATGTTTAC
CTGCTCATGTCAGAAACAAAATAGAATTCAAGCAAAGGACGGAAATTGAAGAATGAACCTACAGCTGTTTAAAACTTTGGCTTTTTATAATTATGGCCCAAATTTGTGATATTGCCAATACCATGAAC
TACAAACATTGAGGGTACTGCCCCCCCACCCAAGTACCAGGGATTGAACTCAGGGGCATATTCGACCACTGAGTCACATCAGCCGTATTTTGTATTTTATTTAGAATCAGGGTCTAACTGAGTGTTTA
GCACCTCACCCAGCATTTCTGAGACTGGCTTTGAACTCTGGATCCTACTGTCTCAGCCTCCTGAGCCACTGGGATTATTGGCATGTGCCACCCTGCCTGTTGAGGCTGTTAATTTCTTAACTAAAGAA
CTGTCACCTTCATTGTATAGGATTAAAGAAATGAAATTCCAACTTTTAAAAAGTGAAGCCCAAAAGGCAATTAAGTTTAGGAACAAAAACAAACAAGACAAGATTTCTTTTAACAAAATTAAAATATA
AGTGATCCCAAGGATGTGGGACAGCAATGCAGAAATTGAAGGAATCTTTCTCAAAATGCCCCAGCATTACATCTCAGTAGGAGCTGCTGTTACAGTGTAATTATGGTCACAGAAAGATGGCCTTGATT
GTACTTCTTGTTTTACAAAAGGTCCTTTGGTACTCTTAAAACATCTATTCTTTGGCTGGAAAATTAGCTCATTAGCTCAATGACATCATTAAGAGAAATTATAATGGTAATGGTCATGGGGCAGGAAG
GCCATTCCATCCGCTAGATTTAATTTATCTTTCCTTGCCTTGACAATGATTTTTCTGGAACAAAGTAGAGGTCTTAAAATTTATTATCATTATTATTGTAGTTATCATATAATAACTGTGTAAGGATT
ACATTTTAATTAAGAAAGATGAAAACCTTTTTTCTTTCCTCAAATCAGCCCAATGGTGCTATTTTACATATCAAGAGTTGAAAGGAAGTACTGTTATTTTGGGCTGCAGTGTTTCCTCCACATCTAAA
GAAAGCCCACCTTGAAATTGGATATTGCATTGAAACAAAGAAGAAAAATTATTTTAACTGTGTGCAATTTTTGAGATTGGGCATTTGTACTTTTTTTAGTTTTACCTAATTCTCTTTCATTAACAATA
TACTGTTTGTGAATAATGTGTACTAAGACAAACTAAGGAAAAGAAAATAAAGATCTGTGAAAGACTTTG

hide sequence

RefSeq Acc Id:

XM_040293424 ⟹ XP_040149358

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,472,621 - 17,186,313 (-)	NCBI

RefSeq Acc Id:

XM_040293429 ⟹ XP_040149363

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,472,621 - 17,185,880 (-)	NCBI

RefSeq Acc Id:

XM_040293435 ⟹ XP_040149369

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,472,621 - 17,186,313 (-)	NCBI

RefSeq Acc Id:

XM_040293440 ⟹ XP_040149374

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,472,621 - 17,186,316 (-)	NCBI

RefSeq Acc Id:

XM_040293445 ⟹ XP_040149379

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,472,621 - 17,185,881 (-)	NCBI

RefSeq Acc Id:

XM_040293455 ⟹ XP_040149389

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,472,621 - 17,186,316 (-)	NCBI

RefSeq Acc Id:

XM_040293461 ⟹ XP_040149395

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,472,621 - 17,185,881 (-)	NCBI

RefSeq Acc Id:

XM_040293468 ⟹ XP_040149402

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,472,621 - 17,186,313 (-)	NCBI

RefSeq Acc Id:

XM_040293474 ⟹ XP_040149408

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,472,621 - 17,186,114 (-)	NCBI

RefSeq Acc Id:

XM_040293477 ⟹ XP_040149411

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,472,621 - 17,186,115 (-)	NCBI

RefSeq Acc Id:

XM_040293480 ⟹ XP_040149414

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,472,621 - 17,186,114 (-)	NCBI


Protein RefSeqs	XP_021584762	(Get FASTA)	NCBI Sequence Viewer
	XP_040149358	(Get FASTA)	NCBI Sequence Viewer
	XP_040149363	(Get FASTA)	NCBI Sequence Viewer
	XP_040149369	(Get FASTA)	NCBI Sequence Viewer
	XP_040149374	(Get FASTA)	NCBI Sequence Viewer
	XP_040149379	(Get FASTA)	NCBI Sequence Viewer
	XP_040149389	(Get FASTA)	NCBI Sequence Viewer
	XP_040149395	(Get FASTA)	NCBI Sequence Viewer
	XP_040149402	(Get FASTA)	NCBI Sequence Viewer
	XP_040149408	(Get FASTA)	NCBI Sequence Viewer
	XP_040149411	(Get FASTA)	NCBI Sequence Viewer
	XP_040149414	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000004930.3
	ENSSTOP00000025087.1
	ENSSTOP00000025588.1
	ENSSTOP00000030209.1
	ENSSTOP00000032609.1

RefSeq Acc Id:	XP_021584762 ⟸ XM_021729087
- Peptide Label:	isoform X1
- UniProtKB:	I3M673 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLGWCEAIARNPHRIPNNTRTPEISGDLADTSQTSTLNDKSPGRSASRSSNISKASSPTTGAAPRSQSRLSVCPSTQDICRSSILHDMSEDAFEHCTPVVVLGPARKECGKKPVKHKPRRRRRASERY KHAEEQIKGGKNDFHLQISSPRWRELYTDSSDSSSTDENHWIQTKKRAQVKFRLSRRRRNNNKPCGNSAASSTPNGIELVDLGSKGEKQQEPKECESCSLNLCRGKVLRYQEGSFETKRPSRNHERNK VRYHCRDSQLLHSLRQNETIKKGFSEMDSSTEILAVAGGSQSMDNTGLQVNNAIQNPPATYDDHLAVCRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIMETKLKPLR KWEKLQMTTSERRKIFCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGNDNGVLEWPFWTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLKAYNRVIFVQNCPDTANKLEKNFSCNVNTDTKEAVVVPI SQTGTNSLPSAESGPPEVIPV hide sequence

RefSeq Acc Id:	XP_040149374 ⟸ XM_040293440
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_040149389 ⟸ XM_040293455
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_040149402 ⟸ XM_040293468
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_040149358 ⟸ XM_040293424
- Peptide Label:	isoform X1
- UniProtKB:	I3M673 (UniProtKB/TrEMBL)

Protein Domains

RING-CH-type RING-type

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000005521	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000005511.3	UniProtKB/TrEMBL
	ENSSTOT00000030535.1	UniProtKB/TrEMBL
	ENSSTOT00000036721.1	UniProtKB/TrEMBL
	ENSSTOT00000042561.1	UniProtKB/TrEMBL
	ENSSTOT00000042753.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.40.10	UniProtKB/TrEMBL
InterPro	Znf_RING	UniProtKB/TrEMBL
	Znf_RING-CH	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
NCBI Gene	March1	ENTREZGENE
PANTHER	LD02310P	UniProtKB/TrEMBL
Pfam	RINGv	UniProtKB/TrEMBL
PROSITE	ZF_RING_2	UniProtKB/TrEMBL
	ZF_RING_CH	UniProtKB/TrEMBL
SMART	RINGv	UniProtKB/TrEMBL
Superfamily-SCOP	RING/U-box	UniProtKB/TrEMBL
UniProt	A0A287CWD6	ENTREZGENE, UniProtKB/TrEMBL
	A0A287DGE0	ENTREZGENE, UniProtKB/TrEMBL
	I3M673	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-07-16	Marchf1	membrane associated ring-CH-type finger 1	March1	membrane associated ring-CH-type finger 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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